Ratio of ORFs, whose 3D-structures are predicted
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Dec 15 2008 Mar 6 2008 Dec 21 2006 Oct 26 2005 Dec 22 2004 May 19 2004 February 9 2004 September 17 2003 April 7 2003 October 29 2002 July 11 2002 February 4 2002 October 25 2001 Aug 9 2001    <-Back

Ratio of ORFs, whose 3D-structures are predicted

DATE Dec 15 2008 
BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf
ORGANISM Norf BLAST PSI-BLAST Membrane G+C content Seq length
min. max.
Cenarchaeum symbiosum (csym0) Archaea 2017 43.8 % (883) 56.8 % (1146) 17.7 % (357) 57.4 % 29 aa 11910 aa
Aeropyrum pernix K1 (aper0) Archaea 1700 51.3 % (872) 69.5 % (1182) 23.8 % (405) 56.3 % 30 aa 1950 aa
Aeropyrum pernix K1 (aper1) Archaea 1841 46.4 % (855) 61.6 % (1134) 24.2 % (446) 35.7 % 50 aa 1933 aa
Ignicoccus hospitalis KIN4/I (ihos0) Archaea 1434 51.8 % (743) 67.9 % (973) 18.5 % (265) 33 aa 1392 aa
Staphylothermus marinus F1 (smar0) Archaea 1570 53.5 % (840) 68.9 % (1081) 24.5 % (385) 35.7 % 36 aa 1701 aa
Hyperthermus butylicus DSM 5456 (hbut0) Archaea 1602 50.7 % (812) 69.0 % (1106) 22.1 % (354) 53.7 % 44 aa 1507 aa
Metallosphaera sedula DSM 5348 (msed0) Archaea 2256 55.1 % (1243) 70.0 % (1579) 22.2 % (501) 46.2 % 46 aa 1455 aa
Sulfolobus acidocaldarius DSM 639 (saci0) Archaea 2223 55.2 % (1228) 70.1 % (1559) 22.0 % (489) 36.7 % 32 aa 1452 aa
Sulfolobus solfataricus P2 (ssol0) Archaea 2994 48.9 % (1463) 68.4 % (2049) 23.8 % (712) 35.8 % 40 aa 1426 aa
Sulfolobus tokodaii str. 7 (stok0) Archaea 2826 47.8 % (1352) 64.5 % (1823) 25.7 % (726) 32.8 % 50 aa 1442 aa
Thermofilum pendens Hrk 5 (tpen0) Archaea 1876 50.0 % (938) 67.8 % (1271) 25.3 % (474) 57.6 % 31 aa 1711 aa
Caldivirga maquilingensis IC-167 (cmaq0) Archaea 1963 56.4 % (1107) 70.7 % (1388) 25.1 % (492) 30 aa 2938 aa
Pyrobaculum aerophilum str. IM2 (paer1) Archaea 2605 40.7 % (1060) 59.8 % (1557) 25.9 % (674) 51.4 % 18 aa 2785 aa
Pyrobaculum arsenaticum DSM 13514 (pars0) Archaea 2298 47.8 % (1099) 63.8 % (1467) 25.0 % (574) 55.1 % 42 aa 2667 aa
Pyrobaculum calidifontis JCM 11548 (pcal0) Archaea 2149 49.9 % (1072) 66.0 % (1418) 26.0 % (559) 57.2 % 42 aa 5058 aa
Pyrobaculum islandicum DSM 4184 (pisl0) Archaea 1978 50.4 % (996) 66.4 % (1314) 23.6 % (467) 49.6 % 35 aa 2656 aa
Nitrosopumilus maritimus SCM1 (nmar0) Archaea 1795 56.8 % (1020) 70.3 % (1262) 22.4 % (402) 36 aa 9585 aa
Archaeoglobus fulgidus DSM 4304 (aful0) Archaea 2407 57.3 % (1379) 72.7 % (1749) 23.7 % (571) 48.6 % 25 aa 2425 aa
Haloarcula marismortui ATCC 43049 (hmar0) Archaea 4240 45.9 % (1945) 61.3 % (2600) 24.2 % (1028) 61.1 % 30 aa 2306 aa
Halobacterium sp. NRC-1 (halo0) Archaea 2605 46.8 % (1219) 62.9 % (1638) 22.0 % (573) 65.9 % 30 aa 1370 aa
Halobacterium salinarum R1 (hsal0) Archaea 2749 45.6 % (1253) 61.9 % (1703) 22.4 % (616) 22 aa 1394 aa
Haloquadratum walsbyi (hwal0) Archaea 2646 48.1 % (1273) 64.0 % (1693) 21.2 % (561) 47.9 % 17 aa 9159 aa
Natronomonas pharaonis DSM 2160 (npha0) Archaea 2822 49.3 % (1391) 64.4 % (1818) 23.0 % (649) 63.1 % 29 aa 1999 aa
Methanobrevibacter smithii ATCC 35061 (msmi0) Archaea 1795 56.4 % (1012) 70.5 % (1265) 22.7 % (408) 35 aa 4691 aa
Methanosphaera stadtmanae DSM 3091 (msta0) Archaea 1534 60.6 % (929) 73.7 % (1131) 21.6 % (332) 27.6 % 37 aa 3356 aa
Methanothermobacter thermautotrophicus str. Delta H (mthe0) Archaea 1869 56.3 % (1053) 72.1 % (1348) 23.0 % (430) 49.5 % 35 aa 1787 aa
Methanocaldococcus jannaschii DSM 2661 (mjan0) Archaea 1770 57.0 % (1009) 72.9 % (1291) 20.7 % (366) 31.3 % 22 aa 2894 aa
Methanococcus aeolicus Nankai-3 (maeo0) Archaea 1490 63.8 % (950) 79.1 % (1178) 20.5 % (305) 30 aa 2064 aa
Methanococcus maripaludis S2 (mmar0) Archaea 1722 61.8 % (1064) 75.4 % (1298) 23.4 % (403) 33.1 % 32 aa 2076 aa
Methanococcus maripaludis C5 (mmar1) Archaea 1822 59.2 % (1078) 72.8 % (1326) 21.7 % (396) 33.0 % 32 aa 2110 aa
Methanococcus maripaludis C6 (mmar4) Archaea 1826 58.1 % (1061) 72.0 % (1314) 22.4 % (409) 39 aa 2168 aa
Methanococcus maripaludis C7 (mmar5) Archaea 1788 59.9 % (1071) 73.2 % (1308) 23.5 % (421) 32 aa 1801 aa
Methanococcus vannielii SB (mvan1) Archaea 1678 62.5 % (1048) 76.0 % (1276) 20.4 % (343) 44 aa 1622 aa
Candidatus Methanoregula boonei 6A8 (mboo0) Archaea 2450 54.1 % (1326) 70.7 % (1732) 27.4 % (671) 29 aa 4079 aa
Methanocorpusculum labreanum Z (mlab0) Archaea 1739 57.8 % (1005) 73.0 % (1269) 24.3 % (422) 50.0 % 47 aa 2772 aa
Methanoculleus marisnigri JR1 (mmar2) Archaea 2489 53.9 % (1342) 69.8 % (1737) 26.0 % (646) 62.1 % 33 aa 1625 aa
Methanospirillum hungatei JF-1 (mhun0) Archaea 3139 53.9 % (1692) 73.0 % (2292) 26.7 % (837) 45.1 % 41 aa 2353 aa
Methanosaeta thermophila PT (mthe2) Archaea 1696 59.5 % (1009) 75.9 % (1288) 22.5 % (382) 53.5 % 41 aa 2713 aa
Methanococcoides burtonii DSM 6242 (mbur0) Archaea 2273 57.1 % (1299) 73.3 % (1665) 26.4 % (600) 40.8 % 45 aa 2552 aa
Methanosarcina acetivorans C2A (mace0) Archaea 4540 48.1 % (2184) 68.0 % (3087) 27.7 % (1259) 42.7 % 41 aa 4226 aa
Methanosarcina barkeri str. Fusaro (mbar0) Archaea 3625 53.6 % (1942) 70.0 % (2538) 28.8 % (1043) 39.2 % 31 aa 2272 aa
Methanosarcina mazei Go1 (mmaz0) Archaea 3371 51.2 % (1726) 69.4 % (2338) 24.1 % (812) 41.5 % 16 aa 1898 aa
Methanopyrus kandleri AV19 (mkan0) Archaea 1687 51.2 % (864) 70.7 % (1192) 20.2 % (340) 61.2 % 39 aa 2042 aa
Pyrococcus abyssi (paby0) Archaea 1784 61.8 % (1102) 77.1 % (1375) 24.7 % (441) 44.7 % 18 aa 2122 aa
Pyrococcus furiosus DSM 3638 (pfur0) Archaea 2065 57.4 % (1186) 72.2 % (1491) 24.8 % (513) 40.8 % 21 aa 1740 aa
Pyrococcus horikoshii OT3 (phor0) Archaea 2061 50.9 % (1049) 62.4 % (1286) 28.0 % (578) 41.9 % 50 aa 4436 aa
Thermococcus kodakarensis KOD1 (tkod0) Archaea 2306 53.4 % (1231) 69.1 % (1594) 27.0 % (622) 52.0 % 33 aa 1798 aa
Picrophilus torridus DSM 9790 (ptor0) Archaea 1535 60.5 % (929) 74.3 % (1140) 24.0 % (368) 36.0 % 24 aa 1667 aa
Thermoplasma acidophilum (taci0) Archaea 1478 60.8 % (898) 74.5 % (1101) 23.0 % (340) 46.0 % 45 aa 2081 aa
Thermoplasma volcanium GSS1 (tvol0) Archaea 1526 60.2 % (918) 73.5 % (1121) 22.3 % (340) 39.9 % 50 aa 2076 aa
Nanoarchaeum equitans Kin4-M (nequ0) Archaea 536 47.0 % (252) 69.6 % (373) 25.7 % (138) 31.6 % 54 aa 2197 aa
Acidobacteria bacterium Ellin345 (abac0) Bacteria 4777 53.5 % (2558) 72.3 % (3456) 32.9 % (1571) 58.4 % 41 aa 3121 aa
Solibacter usitatus Ellin6076 (susi0) Bacteria 7826 49.8 % (3897) 73.2 % (5728) 27.7 % (2169) 61.9 % 37 aa 4666 aa
Corynebacterium diphtheriae (cdip0) Bacteria 2272 55.1 % (1251) 67.9 % (1543) 26.2 % (596) 53.5 % 31 aa 2977 aa
Corynebacterium efficiens YS-314 (ceff0) Bacteria 2998 52.5 % (1573) 68.3 % (2049) 25.2 % (754) 63.0 % 33 aa 3022 aa
Corynebacterium glutamicum ATCC 13032 (cglu0) Bacteria 3099 53.1 % (1645) 66.2 % (2053) 25.6 % (793) 53.8 % 33 aa 2993 aa
Corynebacterium glutamicum ATCC 13032 (cglu1) Bacteria 3057 53.8 % (1646) 67.3 % (2056) 26.3 % (803) 53.8 % 22 aa 2996 aa
Corynebacterium glutamicum R (cglu2) Bacteria 3080 55.4 % (1707) 68.7 % (2115) 26.0 % (800) 13 aa 2996 aa
Corynebacterium jeikeium K411 (cjei0) Bacteria 2120 57.4 % (1216) 73.2 % (1552) 25.0 % (531) 61.4 % 24 aa 3618 aa
Mycobacterium gilvum PYR-GCK (mgil0) Bacteria 5579 55.6 % (3101) 73.5 % (4103) 23.6 % (1319) 67.7 % 32 aa 3679 aa
Mycobacterium leprae (mlep0) Bacteria 1605 61.4 % (985) 72.5 % (1164) 25.9 % (415) 57.8 % 33 aa 3076 aa
Mycobacterium smegmatis str. MC2 155 (msme0) Bacteria 6716 57.7 % (3872) 72.9 % (4898) 22.4 % (1507) 67.4 % 24 aa 7523 aa
Mycobacterium ulcerans Agy99 (mulc0) Bacteria 4160 53.8 % (2236) 73.3 % (3049) 21.9 % (911) 65.5 % 32 aa 4191 aa
Mycobacterium vanbaalenii PYR-1 (mvan0) Bacteria 5979 56.4 % (3372) 73.2 % (4376) 23.7 % (1418) 67.8 % 32 aa 3696 aa
Mycobacterium sp. MCS (myco0) Bacteria 5615 57.1 % (3204) 74.0 % (4153) 22.1 % (1243) 68.4 % 32 aa 3693 aa
Mycobacterium sp. JLS (myco1) Bacteria 5739 58.4 % (3352) 75.3 % (4319) 22.9 % (1312) 68.4 % 32 aa 3702 aa
Mycobacterium sp. KMS (myco2) Bacteria 5975 55.7 % (3331) 72.7 % (4345) 22.4 % (1341) 68.2 % 32 aa 3693 aa
Mycobacterium avium 104 (maqu1) Bacteria 5120 55.5 % (2844) 71.5 % (3663) 19.8 % (1014) 69.0 % 27 aa 10421 aa
Mycobacterium avium subsp. paratuberculosis K-10 (mavi0) Bacteria 4350 59.0 % (2568) 75.9 % (3300) 21.9 % (952) 69.3 % 37 aa 6384 aa
Mycobacterium bovis AF2122/97 (mbov0) Bacteria 3920 54.0 % (2116) 72.4 % (2838) 22.0 % (861) 65.6 % 26 aa 4151 aa
Mycobacterium bovis BCG str. Pasteur 1173P2 (mbov1) Bacteria 3953 54.2 % (2142) 72.7 % (2875) 21.9 % (867) 65.6 % 10 aa 4151 aa
Mycobacterium tuberculosis H37Rv (mtub0) Bacteria 3991 53.9 % (2152) 73.1 % (2918) 21.9 % (874) 65.6 % 27 aa 4151 aa
Mycobacterium tuberculosis CDC1551 (mtub1) Bacteria 4189 50.0 % (2094) 67.4 % (2822) 21.3 % (892) 65.6 % 30 aa 4151 aa
Mycobacterium tuberculosis F11 (mtub2) Bacteria 3941 54.7 % (2155) 73.6 % (2900) 22.2 % (873) 34 aa 4151 aa
Mycobacterium tuberculosis H37Ra (mtub3) Bacteria 4034 51.9 % (2094) 72.4 % (2920) 21.9 % (884) 30 aa 4151 aa
Nocardia farcinica IFM 10152 (nfar0) Bacteria 5936 50.4 % (2989) 67.5 % (4006) 21.9 % (1302) 70.7 % 34 aa 14474 aa
Rhodococcus sp. RHA1 (rhod0) Bacteria 9145 53.1 % (4858) 68.6 % (6270) 19.8 % (1807) 67.0 % 24 aa 11258 aa
Acidothermus cellulolyticus 11B (acel0) Bacteria 2157 62.2 % (1341) 75.9 % (1637) 24.7 % (532) 66.9 % 32 aa 1785 aa
Frankia alni ACN14a (faln0) Bacteria 6711 47.5 % (3186) 63.9 % (4290) 19.2 % (1290) 72.8 % 20 aa 7085 aa
Frankia sp. CcI3 (fran0) Bacteria 4499 48.5 % (2182) 68.4 % (3076) 21.0 % (944) 70.1 % 32 aa 4606 aa
Frankia sp. EAN1pec (fran1) Bacteria 7191 51.3 % (3686) 72.4 % (5209) 20.4 % (1466) 26 aa 6999 aa
Kineococcus radiotolerans SRS30216 (krad0) Bacteria 4681 49.5 % (2318) 67.0 % (3136) 24.1 % (1126) 27 aa 1995 aa
Tropheryma whipplei TW08/27 (twhi0) Bacteria 783 65.9 % (516) 74.8 % (586) 30.5 % (239) 46.3 % 29 aa 2308 aa
Tropheryma whipplei str. Twist (twhi1) Bacteria 808 64.2 % (519) 73.1 % (591) 32.1 % (259) 46.3 % 39 aa 2312 aa
Clavibacter michiganensis subsp. michiganensis NCPPB 382 (cmic0) Bacteria 3079 54.0 % (1663) 69.4 % (2136) 29.2 % (898) 28 aa 2295 aa
Clavibacter michiganensis subsp. sepedonicus (cmic1) Bacteria 3119 50.6 % (1579) 66.5 % (2074) 28.2 % (880) 21 aa 2007 aa
Leifsonia xyli subsp. xyli str. CTCB07 (lxyl0) Bacteria 2030 54.2 % (1100) 69.3 % (1407) 24.9 % (506) 67.7 % 20 aa 1980 aa
Arthrobacter aurescens TC1 (aaur0) Bacteria 4587 56.6 % (2594) 72.1 % (3305) 25.8 % (1183) 62.4 % 30 aa 2109 aa
Arthrobacter sp. FB24 (arth0) Bacteria 4506 57.0 % (2570) 72.4 % (3262) 26.3 % (1186) 65.4 % 32 aa 3524 aa
Renibacterium salmoninarum ATCC 33209 (rsal0) Bacteria 3507 53.2 % (1864) 71.0 % (2489) 24.6 % (863) 22 aa 2433 aa
Salinispora arenicola CNS-205 (sare0) Bacteria 4917 52.1 % (2564) 68.8 % (3383) 22.8 % (1122) 37 aa 7785 aa
Salinispora tropica CNB-440 (stro0) Bacteria 4536 53.2 % (2412) 69.4 % (3146) 22.9 % (1038) 69.5 % 33 aa 7210 aa
Nocardioides sp. JS614 (noca0) Bacteria 4909 55.4 % (2721) 72.6 % (3562) 24.6 % (1206) 71.4 % 33 aa 1980 aa
Propionibacterium acnes KPA171202 (pacn0) Bacteria 2297 57.9 % (1331) 71.7 % (1647) 26.2 % (601) 60.0 % 33 aa 2117 aa
Saccharopolyspora erythraea NRRL 2338 (sery0) Bacteria 7197 53.8 % (3871) 70.4 % (5069) 21.7 % (1562) 71.1 % 30 aa 11792 aa
Streptomyces avermitilis MA-4680 (save0) Bacteria 7676 50.8 % (3901) 69.6 % (5341) 22.9 % (1761) 70.7 % 33 aa 7746 aa
Streptomyces coelicolor (scoe0) Bacteria 8154 49.9 % (4067) 68.9 % (5621) 22.6 % (1843) 72.0 % 19 aa 7463 aa
Thermobifida fusca YX (tfus0) Bacteria 3110 56.4 % (1753) 71.2 % (2213) 25.8 % (803) 67.5 % 32 aa 3629 aa
Bifidobacterium adolescentis ATCC 15703 (bado0) Bacteria 1631 60.2 % (982) 74.4 % (1214) 26.2 % (428) 59.2 % 37 aa 3111 aa
Bifidobacterium longum NCC2705 (blon0) Bacteria 1729 60.5 % (1046) 75.1 % (1299) 25.0 % (432) 60.1 % 15 aa 3172 aa
Rubrobacter xylanophilus DSM 9941 (rxyl0) Bacteria 3140 62.6 % (1966) 74.9 % (2353) 24.8 % (779) 70.5 % 44 aa 1618 aa
Aquifex aeolicus VF5 (aaeo0) Bacteria 1553 68.6 % (1065) 81.1 % (1260) 24.1 % (374) 43.3 % 47 aa 1574 aa
Bacteroides fragilis NCTC 9343 (bfra1) Bacteria 4236 49.3 % (2087) 70.1 % (2968) 32.2 % (1365) 43.1 % 30 aa 1957 aa
Bacteroides fragilis YCH46 (bfra0) Bacteria 4625 46.0 % (2127) 66.0 % (3051) 31.2 % (1445) 43.2 % 38 aa 1957 aa
Bacteroides thetaiotaomicron VPI-5482 (bthe0) Bacteria 4816 49.8 % (2397) 74.2 % (3574) 32.4 % (1561) 42.9 % 32 aa 2183 aa
Bacteroides vulgatus ATCC 8482 (bvul0) Bacteria 4065 49.8 % (2023) 71.7 % (2914) 28.0 % (1138) 31 aa 1892 aa
Parabacteroides distasonis ATCC 8503 (pdis0) Bacteria 3850 53.1 % (2045) 73.9 % (2847) 31.6 % (1217) 42 aa 2472 aa
Porphyromonas gingivalis W83 (pgin0) Bacteria 1909 50.9 % (972) 70.2 % (1341) 27.0 % (516) 48.3 % 30 aa 2316 aa
Candidatus Sulcia muelleri GWSS (smue0) Bacteria 227 83.3 % (189) 86.8 % (197) 14.1 % (32) 38 aa 1507 aa
Flavobacterium johnsoniae UW101 (fjoh0) Bacteria 5017 51.3 % (2572) 71.9 % (3608) 27.2 % (1366) 34.1 % 30 aa 6497 aa
Flavobacterium psychrophilum JIP02/86 (fpsy0) Bacteria 2412 55.6 % (1340) 71.4 % (1721) 25.3 % (610) 27 aa 3325 aa
Gramella forsetii KT0803 (gfor0) Bacteria 3584 51.0 % (1828) 68.3 % (2447) 30.2 % (1081) 36.6 % 30 aa 4528 aa
Salinibacter ruber DSM 13855 (srub0) Bacteria 2833 56.2 % (1593) 74.0 % (2097) 27.3 % (772) 66.1 % 30 aa 2597 aa
Cytophaga hutchinsonii ATCC 33406 (chut0) Bacteria 3785 49.1 % (1860) 66.7 % (2523) 33.4 % (1266) 38.8 % 49 aa 5453 aa
Chlamydia muridarum Nigg (cmur0) Bacteria 911 57.1 % (520) 70.4 % (641) 27.1 % (247) 40.3 % 33 aa 3335 aa
Chlamydia trachomatis D/UW-3/CX (ctra0) Bacteria 894 57.7 % (516) 71.8 % (642) 27.2 % (243) 41.3 % 45 aa 1786 aa
Chlamydia trachomatis A/HAR-13 (ctra1) Bacteria 919 56.6 % (520) 70.5 % (648) 27.4 % (252) 41.3 % 45 aa 1786 aa
Chlamydia trachomatis 434/Bu (ctra2) Bacteria 874 59.0 % (516) 73.2 % (640) 26.5 % (232) 45 aa 1786 aa
Chlamydia trachomatis L2b/UCH-1/proctitis (ctra3) Bacteria 874 58.9 % (515) 73.5 % (642) 26.5 % (232) 45 aa 1786 aa
Chlamydophila abortus S26/3 (cabo0) Bacteria 932 58.4 % (544) 73.3 % (683) 30.7 % (286) 39.9 % 39 aa 1806 aa
Chlamydophila caviae GPIC (ccav0) Bacteria 1005 54.6 % (549) 69.5 % (698) 30.5 % (307) 39.2 % 30 aa 3346 aa
Chlamydophila felis Fe/C-56 (cfel0) Bacteria 1013 54.7 % (554) 70.8 % (717) 28.5 % (289) 39.3 % 40 aa 3298 aa
Chlamydophila pneumoniae AR39 (cpne0) Bacteria 1116 47.4 % (529) 63.4 % (707) 31.4 % (350) 40.6 % 30 aa 1826 aa
Chlamydophila pneumoniae CWL029 (cpne1) Bacteria 1052 50.3 % (529) 67.0 % (705) 32.0 % (337) 40.6 % 40 aa 1826 aa
Chlamydophila pneumoniae J138 (cpne2) Bacteria 1069 50.0 % (535) 67.0 % (716) 31.2 % (333) 40.6 % 40 aa 1826 aa
Chlamydophila pneumoniae TW-183 (cpne3) Bacteria 1113 48.1 % (535) 64.2 % (715) 30.6 % (341) 40.6 % 33 aa 1826 aa
Candidatus Protochlamydia amoebophila UWE25 (para0) Bacteria 2031 48.0 % (975) 64.1 % (1301) 25.9 % (526) 34.7 % 45 aa 3181 aa
Chlorobium tepidum TLS (ctep0) Bacteria 2255 54.3 % (1225) 67.4 % (1519) 21.5 % (485) 56.5 % 30 aa 1538 aa
Chlorobium chlorochromatii CaD3 (cchl0) Bacteria 2002 57.9 % (1159) 75.8 % (1517) 18.8 % (376) 44.3 % 31 aa 36805 aa
Chlorobium phaeobacteroides DSM 266 (cpha0) Bacteria 2650 54.1 % (1434) 74.1 % (1963) 21.8 % (578) 48.4 % 38 aa 4876 aa
Prosthecochloris vibrioformis DSM 265 (pvid0) Bacteria 1753 64.1 % (1123) 79.3 % (1391) 24.1 % (422) 36 aa 7428 aa
Pelodictyon luteolum DSM 273 (plut0) Bacteria 2083 61.4 % (1280) 78.2 % (1628) 24.2 % (504) 57.3 % 48 aa 7284 aa
Chloroflexus aurantiacus J-10-fl (caur0) Bacteria 3853 58.1 % (2238) 74.5 % (2870) 30.9 % (1191) 36 aa 5505 aa
Roseiflexus castenholzii DSM 13941 (rcas0) Bacteria 4330 55.3 % (2394) 74.9 % (3244) 29.8 % (1291) 38 aa 5203 aa
Roseiflexus sp. RS-1 (rose0) Bacteria 4517 54.2 % (2446) 74.4 % (3361) 29.8 % (1346) 38 aa 5166 aa
Dehalococcoides sp. CBDB1 (deha0) Bacteria 1458 60.3 % (879) 71.9 % (1048) 23.6 % (344) 47.0 % 27 aa 1434 aa
Dehalococcoides sp. BAV1 (deha1) Bacteria 1371 62.4 % (856) 74.2 % (1017) 22.4 % (307) 47.2 % 31 aa 1823 aa
Dehalococcoides ethenogenes 195 (deth0) Bacteria 1580 54.6 % (862) 69.4 % (1097) 22.8 % (361) 48.9 % 30 aa 1834 aa
Herpetosiphon aurantiacus ATCC 23779 (haur0) Bacteria 5278 52.4 % (2768) 72.1 % (3804) 30.8 % (1628) 38 aa 6661 aa
Acaryochloris marina MBIC11017 (amar1) Bacteria 8383 39.4 % (3303) 56.9 % (4766) 22.2 % (1859) 29 aa 3597 aa
Microcystis aeruginosa NIES-843 (maer0) Bacteria 6312 35.8 % (2259) 54.3 % (3426) 19.2 % (1210) 29 aa 4724 aa
Synechococcus sp. JA-3-3Ab (cyel0) Bacteria 2760 51.8 % (1431) 69.2 % (1909) 23.9 % (661) 60.2 % 27 aa 2413 aa
Synechococcus sp. JA-3-3Ab (cyel0) Bacteria 2760 51.8 % (1431) 69.2 % (1909) 23.9 % (661) 60.2 % 27 aa 2413 aa
Synechococcus elongatus PCC 6301 (selo0) Bacteria 2525 56.8 % (1433) 71.8 % (1812) 25.0 % (630) 55.5 % 15 aa 1568 aa
Synechococcus elongatus PCC 7942 (selo1) Bacteria 2661 55.1 % (1466) 70.7 % (1880) 25.5 % (678) 55.4 % 29 aa 1807 aa
Synechococcus sp. WH 8102 (syne1) Bacteria 2517 49.9 % (1257) 66.5 % (1675) 21.6 % (543) 59.4 % 31 aa 10791 aa
Synechococcus sp. CC9902 (syne2) Bacteria 2304 52.0 % (1199) 66.8 % (1539) 23.4 % (538) 54.2 % 25 aa 3504 aa
Synechococcus sp. CC9605 (syne3) Bacteria 2638 47.1 % (1242) 62.9 % (1659) 22.6 % (597) 59.2 % 32 aa 1533 aa
Synechococcus sp. CC9311 (syne4) Bacteria 2892 45.5 % (1316) 57.8 % (1673) 24.9 % (720) 52.4 % 27 aa 2178 aa
Synechococcus sp. WH 7803 (syne5) Bacteria 2533 50.3 % (1274) 64.5 % (1635) 25.9 % (655) 60.2 % 31 aa 2208 aa
Synechococcus sp. RCC307 (syne6) Bacteria 2535 49.1 % (1244) 62.4 % (1581) 25.0 % (633) 20 aa 1915 aa
Synechocystis sp. PCC 6803 (syne0) Bacteria 3569 50.5 % (1801) 71.4 % (2549) 25.2 % (901) 47.4 % 29 aa 4199 aa
Thermosynechococcus elongatus BP-1 (telo0) Bacteria 2475 56.2 % (1390) 72.4 % (1793) 26.5 % (656) 53.9 % 29 aa 1706 aa
Gloeobacter violaceus PCC 7421 (gvio0) Bacteria 4430 50.8 % (2250) 70.1 % (3105) 24.1 % (1066) 62.0 % 28 aa 3277 aa
Anabaena variabilis ATCC 29413 (anab1) Bacteria 5657 51.4 % (2909) 69.5 % (3934) 25.5 % (1440) 41.4 % 28 aa 6581 aa
Nostoc sp. PCC 7120 (anab0) Bacteria 6132 47.3 % (2898) 66.3 % (4068) 25.6 % (1567) 41.3 % 17 aa 4936 aa
Trichodesmium erythraeum IMS101 (tery0) Bacteria 4451 48.7 % (2167) 67.7 % (3014) 22.9 % (1018) 34.1 % 28 aa 9867 aa
Prochlorococcus marinus subsp. pastoris str. CCMP1986 (pmar0) Bacteria 1926 51.1 % (984) 63.9 % (1231) 27.5 % (529) 30.8 % 25 aa 1521 aa
Prochlorococcus marinus str. MIT 9313 (pmar1) Bacteria 2265 51.2 % (1159) 65.7 % (1489) 24.6 % (558) 50.7 % 33 aa 1765 aa
Prochlorococcus marinus subsp. marinus str. CCMP1375 (pmar2) Bacteria 1882 53.5 % (1006) 65.7 % (1237) 25.4 % (478) 36.4 % 30 aa 1524 aa
Prochlorococcus marinus str. NATL2A (pmar3) Bacteria 2163 47.0 % (1017) 57.4 % (1241) 28.0 % (605) 35.1 % 27 aa 1821 aa
Prochlorococcus marinus str. MIT 9312 (pmar4) Bacteria 1962 50.6 % (992) 62.9 % (1234) 27.0 % (530) 31.2 % 30 aa 1468 aa
Prochlorococcus marinus str. AS9601 (pmar5) Bacteria 1921 52.1 % (1001) 64.4 % (1238) 26.1 % (502) 31.3 % 29 aa 4723 aa
Prochlorococcus marinus str. MIT 9301 (pmar6) Bacteria 1907 52.6 % (1003) 64.5 % (1230) 26.0 % (496) 31.3 % 29 aa 1523 aa
Prochlorococcus marinus str. MIT 9303 (pmar7) Bacteria 2997 41.6 % (1246) 53.8 % (1612) 23.1 % (693) 50.0 % 28 aa 2199 aa
Prochlorococcus marinus str. MIT 9515 (pmar8) Bacteria 1906 51.4 % (979) 64.0 % (1219) 26.4 % (504) 30.8 % 25 aa 1524 aa
Prochlorococcus marinus str. NATL1A (pmar9) Bacteria 2193 46.4 % (1018) 57.2 % (1254) 27.3 % (599) 35.0 % 30 aa 2178 aa
Prochlorococcus marinus str. MIT 9211 (pmarA) Bacteria 1855 53.0 % (983) 65.1 % (1207) 27.0 % (500) 25 aa 1531 aa
Prochlorococcus marinus str. MIT 9215 (pmarB) Bacteria 1983 51.0 % (1011) 63.7 % (1263) 24.8 % (492) 25 aa 1524 aa
Deinococcus geothermalis DSM 11300 (dgeo0) Bacteria 3054 57.0 % (1740) 73.0 % (2228) 21.7 % (662) 66.5 % 30 aa 3243 aa
Deinococcus radiodurans R1 (drad0) Bacteria 3101 53.6 % (1661) 69.6 % (2157) 20.1 % (623) 66.6 % 37 aa 1940 aa
Thermus thermophilus HB27 (tthe0) Bacteria 2210 61.2 % (1353) 74.8 % (1653) 23.5 % (519) 69.4 % 27 aa 2672 aa
Thermus thermophilus HB8 (tthe1) Bacteria 2238 60.9 % (1364) 74.6 % (1669) 22.8 % (511) 69.5 % 11 aa 2672 aa
Bacillus amyloliquefaciens FZB42 (bamy0) Bacteria 3693 60.9 % (2249) 72.4 % (2672) 29.1 % (1073) 26 aa 5433 aa
Bacillus clausii KSM-K16 (bcla0) Bacteria 4087 60.9 % (2491) 73.7 % (3013) 27.9 % (1139) 44.8 % 26 aa 2870 aa
Bacillus halodurans C-125 (bhal0) Bacteria 4066 57.9 % (2353) 71.8 % (2921) 28.8 % (1171) 43.7 % 11 aa 1816 aa
Bacillus licheniformis DSM 13 (blic0) Bacteria 4196 58.6 % (2459) 70.9 % (2976) 29.4 % (1234) 46.2 % 24 aa 3588 aa
Bacillus licheniformis ATCC 14580 (blic1) Bacteria 4179 57.6 % (2409) 69.6 % (2910) 29.8 % (1244) 46.2 % 22 aa 3588 aa
Bacillus pumilus SAFR-032 (bpum0) Bacteria 3681 58.8 % (2165) 70.3 % (2588) 30.1 % (1108) 24 aa 3570 aa
Bacillus subtilis subsp. subtilis str. 168 (bsub0) Bacteria 4106 58.4 % (2398) 70.3 % (2888) 29.3 % (1202) 43.5 % 20 aa 5488 aa
Bacillus anthracis str. Ames (bant0) Bacteria 5311 51.0 % (2706) 62.2 % (3303) 31.4 % (1666) 35.4 % 28 aa 5017 aa
Bacillus anthracis str. Ames (bant1) Bacteria 5585 49.3 % (2751) 60.4 % (3371) 31.4 % (1752) 35.2 % 28 aa 5017 aa
Bacillus anthracis str. Sterne (bant2) Bacteria 5287 54.2 % (2865) 66.9 % (3538) 31.8 % (1679) 35.4 % 35 aa 5017 aa
Bacillus cereus ATCC 14579 (bcer0) Bacteria 5255 53.1 % (2789) 66.0 % (3470) 30.2 % (1586) 35.3 % 18 aa 5017 aa
Bacillus cereus ATCC 10987 (bcer1) Bacteria 5844 49.6 % (2901) 61.7 % (3604) 31.3 % (1829) 35.5 % 30 aa 3242 aa
Bacillus cereus E33L (bcer2) Bacteria 5641 53.3 % (3005) 66.4 % (3744) 31.8 % (1796) 35.1 % 44 aa 5017 aa
Bacillus cereus subsp. cytotoxis NVH 391-98 (bcer3) Bacteria 3844 54.5 % (2094) 66.6 % (2561) 29.1 % (1117) 30 aa 3099 aa
Bacillus thuringiensis serovar konkukian str. 97-27 (bthu0) Bacteria 5197 54.1 % (2813) 66.8 % (3472) 32.1 % (1667) 35.4 % 48 aa 5017 aa
Bacillus thuringiensis str. Al Hakam (bthu1) Bacteria 4798 58.7 % (2816) 71.5 % (3429) 29.3 % (1408) 35.4 % 46 aa 5010 aa
Bacillus weihenstephanensis KBAB4 (bwei0) Bacteria 5653 52.9 % (2993) 64.9 % (3670) 31.2 % (1762) 28 aa 4968 aa
Geobacillus kaustophilus HTA426 (gkau0) Bacteria 3540 54.9 % (1945) 68.9 % (2440) 25.8 % (912) 52.0 % 23 aa 2301 aa
Geobacillus thermodenitrificans NG80-2 (gthe1) Bacteria 3445 58.0 % (1999) 69.8 % (2404) 27.0 % (930) 44 aa 1586 aa
Oceanobacillus iheyensis HTE831 (oihe0) Bacteria 3496 60.3 % (2107) 71.2 % (2490) 32.2 % (1127) 35.7 % 24 aa 2373 aa
Listeria innocua (linn0) Bacteria 3043 61.4 % (1867) 73.8 % (2246) 26.3 % (801) 37.4 % 37 aa 2167 aa
Listeria monocytogenes (lmon0) Bacteria 2846 65.0 % (1849) 76.0 % (2164) 28.1 % (800) 38.0 % 28 aa 2044 aa
Listeria monocytogenes str. 4b F2365 (lmon1) Bacteria 2821 63.6 % (1794) 74.9 % (2114) 29.1 % (820) 38.0 % 28 aa 2195 aa
Listeria welshimeri serovar 6b str. SLCC5334 (lwel0) Bacteria 2774 62.6 % (1736) 73.3 % (2032) 28.9 % (802) 36.4 % 30 aa 2753 aa
Staphylococcus aureus subsp. aureus Mu50 (saur0) Bacteria 2733 59.1 % (1615) 70.6 % (1930) 27.6 % (754) 32.8 % 16 aa 6713 aa
Staphylococcus aureus subsp. aureus N315 (saur1) Bacteria 2624 61.4 % (1611) 71.5 % (1877) 28.2 % (741) 32.8 % 16 aa 6713 aa
Staphylococcus aureus subsp. aureus MW2 (saur2) Bacteria 2659 59.8 % (1590) 70.1 % (1864) 28.4 % (756) 32.8 % 18 aa 9904 aa
Staphylococcus aureus subsp. aureus MRSA252 (saur3) Bacteria 2656 57.2 % (1519) 70.0 % (1858) 27.7 % (737) 32.8 % 16 aa 10746 aa
Staphylococcus aureus subsp. aureus MSSA476 (saur4) Bacteria 2598 60.5 % (1571) 70.6 % (1834) 28.5 % (741) 32.8 % 16 aa 2391 aa
Staphylococcus aureus subsp. aureus COL (saur5) Bacteria 2676 58.2 % (1558) 68.2 % (1825) 27.0 % (723) 32.8 % 21 aa 10498 aa
Staphylococcus aureus RF122 (saur6) Bacteria 2515 60.1 % (1512) 70.9 % (1784) 28.2 % (710) 32.8 % 34 aa 2396 aa
Staphylococcus aureus subsp. aureus NCTC 8325 (saur7) Bacteria 2892 54.6 % (1580) 64.6 % (1868) 27.0 % (780) 32.9 % 29 aa 9535 aa
Staphylococcus aureus subsp. aureus USA300_FPR3757 (saur8) Bacteria 2604 61.7 % (1606) 72.8 % (1896) 26.6 % (692) 32.7 % 30 aa 10421 aa
Staphylococcus aureus subsp. aureus JH9 (saur9) Bacteria 2726 57.0 % (1554) 70.4 % (1918) 26.7 % (729) 32.9 % 26 aa 10624 aa
Staphylococcus aureus subsp. aureus JH1 (saurA) Bacteria 2780 57.7 % (1605) 69.2 % (1924) 27.3 % (759) 26 aa 10624 aa
Staphylococcus aureus subsp. aureus Mu3 (saurB) Bacteria 2699 59.5 % (1606) 70.9 % (1914) 27.7 % (747) 11 aa 6713 aa
Staphylococcus aureus subsp. aureus str. Newman (saurC) Bacteria 2614 60.4 % (1579) 71.5 % (1869) 27.0 % (705) 23 aa 7031 aa
Staphylococcus aureus subsp. aureus USA300_TCH1516 (saurD) Bacteria 2683 56.6 % (1518) 66.1 % (1773) 27.5 % (737) 19 aa 10421 aa
Staphylococcus epidermidis ATCC 12228 (sepi0) Bacteria 2485 57.6 % (1431) 68.6 % (1704) 26.8 % (666) 32.0 % 25 aa 9439 aa
Staphylococcus epidermidis RP62A (sepi1) Bacteria 2526 56.8 % (1435) 67.5 % (1706) 25.9 % (655) 32.1 % 19 aa 10203 aa
Staphylococcus haemolyticus JCSC1435 (shae0) Bacteria 2694 55.9 % (1505) 68.9 % (1855) 28.0 % (754) 32.8 % 11 aa 4354 aa
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 (ssap0) Bacteria 2514 61.3 % (1540) 71.6 % (1800) 28.2 % (708) 33.2 % 17 aa 2316 aa
Alkaliphilus metalliredigens QYMF (amet0) Bacteria 4625 51.4 % (2378) 66.8 % (3090) 29.0 % (1343) 34 aa 2843 aa
Alkaliphilus oremlandii OhILAs (aore0) Bacteria 2836 60.1 % (1704) 73.9 % (2097) 29.9 % (848) 37 aa 2075 aa
Clostridium acetobutylicum ATCC 824 (cace0) Bacteria 3848 58.0 % (2230) 71.3 % (2744) 28.0 % (1076) 30.9 % 27 aa 2870 aa
Clostridium beijerinckii NCIMB 8052 (cbei0) Bacteria 5020 62.4 % (3133) 75.3 % (3782) 26.5 % (1331) 37 aa 4034 aa
Clostridium botulinum A str. ATCC 19397 (cbot0) Bacteria 3552 58.6 % (2080) 69.7 % (2476) 27.8 % (989) 24 aa 2882 aa
Clostridium botulinum A str. ATCC 3502 (cbot1) Bacteria 3592 58.2 % (2091) 70.2 % (2523) 28.1 % (1009) 23 aa 2882 aa
Clostridium botulinum A str. Hall (cbot2) Bacteria 3404 59.8 % (2035) 71.7 % (2439) 28.5 % (969) 24 aa 2882 aa
Clostridium botulinum F str. Langeland (cbot3) Bacteria 3659 55.9 % (2046) 69.7 % (2549) 28.0 % (1023) 37 aa 2882 aa
Clostridium difficile 630 (cdif0) Bacteria 3753 57.5 % (2157) 71.2 % (2673) 27.3 % (1025) 29.1 % 6 aa 3011 aa
Clostridium kluyveri DSM 555 (cklu0) Bacteria 3913 54.2 % (2119) 69.0 % (2701) 25.4 % (992) 30 aa 3072 aa
Clostridium novyi NT (cnov0) Bacteria 2325 60.4 % (1404) 73.5 % (1710) 27.1 % (629) 28.9 % 30 aa 2861 aa
Clostridium perfringens str. 13 (cper0) Bacteria 2723 57.5 % (1566) 71.7 % (1953) 30.5 % (831) 28.5 % 37 aa 2104 aa
Clostridium perfringens ATCC 13124 (cper1) Bacteria 2876 57.8 % (1663) 70.4 % (2025) 30.8 % (886) 28.4 % 30 aa 2638 aa
Clostridium perfringens SM101 (cper2) Bacteria 2631 57.7 % (1519) 71.8 % (1889) 28.9 % (761) 28.2 % 30 aa 2095 aa
Clostridium phytofermentans ISDg (cphy0) Bacteria 3902 59.8 % (2334) 75.4 % (2941) 31.1 % (1215) 37 aa 2457 aa
Clostridium tetani E88 (ctet0) Bacteria 2432 60.7 % (1476) 75.8 % (1843) 30.3 % (738) 28.6 % 71 aa 2838 aa
Clostridium thermocellum ATCC 27405 (cthe0) Bacteria 3191 56.7 % (1810) 74.8 % (2387) 29.2 % (933) 39.0 % 37 aa 6885 aa
Heliobacterium modesticaldum Ice1 (hmod0) Bacteria 3000 48.7 % (1461) 63.3 % (1900) 20.6 % (618) 37 aa 2976 aa
Carboxydothermus hydrogenoformans Z-2901 (chyd0) Bacteria 2620 55.8 % (1461) 69.6 % (1823) 24.3 % (637) 42.0 % 28 aa 1407 aa
Desulfitobacterium hafniense Y51 (dhaf0) Bacteria 5060 58.2 % (2946) 74.4 % (3767) 28.1 % (1422) 47.4 % 35 aa 3013 aa
Desulfotomaculum reducens MI-1 (dred0) Bacteria 3276 55.6 % (1822) 72.5 % (2375) 25.5 % (836) 42.3 % 36 aa 2630 aa
Pelotomaculum thermopropionicum SI (pthe0) Bacteria 2920 53.3 % (1556) 73.0 % (2132) 22.2 % (648) 53.0 % 30 aa 2071 aa
Finegoldia magna ATCC 29328 (fmag0) Bacteria 1813 60.0 % (1087) 73.9 % (1339) 29.8 % (541) 16 aa 4919 aa
Caldicellulosiruptor saccharolyticus DSM 8903 (csac0) Bacteria 2679 57.7 % (1546) 75.6 % (2026) 27.6 % (740) 35.3 % 30 aa 2593 aa
Syntrophomonas wolfei subsp. wolfei str. Goettingen (swol0) Bacteria 2504 57.7 % (1444) 76.2 % (1907) 22.9 % (573) 44.9 % 35 aa 2638 aa
Moorella thermoacetica ATCC 39073 (mthe1) Bacteria 2463 59.5 % (1465) 77.0 % (1897) 24.4 % (600) 55.8 % 37 aa 1487 aa
Thermoanaerobacter sp. X514 (ther0) Bacteria 2349 63.4 % (1489) 76.5 % (1797) 26.3 % (617) 27 aa 2887 aa
Thermoanaerobacter pseudethanolicus ATCC 33223 (tpse1) Bacteria 2243 61.4 % (1378) 77.0 % (1728) 25.3 % (568) 31 aa 2887 aa
Thermoanaerobacter tengcongensis MB4 (tten0) Bacteria 2588 59.5 % (1541) 74.1 % (1919) 27.6 % (715) 37.6 % 37 aa 2862 aa
Enterococcus faecalis V583 (efae0) Bacteria 3265 52.6 % (1716) 66.1 % (2158) 27.7 % (906) 37.4 % 22 aa 3173 aa
Lactobacillus acidophilus NCFM (laci0) Bacteria 1862 60.3 % (1123) 74.8 % (1393) 27.5 % (512) 34.7 % 27 aa 4326 aa
Lactobacillus brevis ATCC 367 (lbre0) Bacteria 2218 58.0 % (1287) 71.0 % (1575) 28.2 % (626) 46.1 % 23 aa 1895 aa
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (lbul0) Bacteria 1562 59.1 % (923) 68.8 % (1074) 26.0 % (406) 49.7 % 16 aa 1946 aa
Lactobacillus casei ATCC 334 (lcas0) Bacteria 2771 53.1 % (1471) 67.3 % (1866) 29.7 % (822) 46.6 % 17 aa 2209 aa
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 (ldel0) Bacteria 1721 55.5 % (955) 55.5 % (955) 25.6 % (441) 49.7 % 15 aa 1813 aa
Lactobacillus gasseri ATCC 33323 (lgas0) Bacteria 1755 60.1 % (1055) 71.8 % (1260) 26.0 % (457) 35.3 % 30 aa 3692 aa
Lactobacillus helveticus DPC 4571 (lhel0) Bacteria 1610 58.9 % (948) 78.0 % (1255) 23.3 % (375) 36 aa 1438 aa
Lactobacillus johnsonii NCC 533 (ljoh0) Bacteria 1821 59.6 % (1085) 73.6 % (1341) 29.0 % (529) 34.6 % 38 aa 4734 aa
Lactobacillus plantarum WCFS1 (lpla0) Bacteria 3059 57.2 % (1750) 70.7 % (2162) 27.9 % (854) 44.4 % 24 aa 5289 aa
Lactobacillus reuteri F275 (lreu0) Bacteria 1900 58.1 % (1103) 72.7 % (1382) 23.4 % (445) 31 aa 1443 aa
Lactobacillus sakei subsp. sakei 23K (lsak0) Bacteria 1885 59.5 % (1121) 71.3 % (1344) 28.8 % (542) 41.3 % 7 aa 1987 aa
Lactobacillus salivarius UCC118 (lsal0) Bacteria 2014 57.1 % (1151) 69.6 % (1402) 25.4 % (512) 33.0 % 35 aa 1444 aa
Pediococcus pentosaceus ATCC 25745 (ppen0) Bacteria 1755 62.5 % (1096) 73.1 % (1283) 25.9 % (454) 37.4 % 15 aa 3017 aa
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 (lmes0) Bacteria 2005 61.5 % (1234) 72.9 % (1461) 29.0 % (581) 37.7 % 17 aa 2821 aa
Oenococcus oeni PSU-1 (ooen0) Bacteria 1691 61.6 % (1042) 71.6 % (1210) 27.9 % (471) 37.9 % 22 aa 1475 aa
Lactococcus lactis subsp. lactis Il1403 (llac0) Bacteria 2266 59.0 % (1338) 72.5 % (1642) 27.1 % (613) 35.3 % 31 aa 1983 aa
Lactococcus lactis subsp. cremoris SK11 (llac1) Bacteria 2504 55.6 % (1391) 70.1 % (1755) 24.3 % (609) 35.8 % 15 aa 1962 aa
Lactococcus lactis subsp. cremoris MG1363 (llac2) Bacteria 2434 58.1 % (1413) 70.6 % (1719) 25.5 % (621) 35.7 % 25 aa 1715 aa
Streptococcus agalactiae 2603V/R (saga0) Bacteria 2124 57.9 % (1229) 70.9 % (1506) 26.8 % (570) 35.6 % 23 aa 2274 aa
Streptococcus agalactiae NEM316 (saga1) Bacteria 2094 59.7 % (1251) 72.5 % (1518) 28.8 % (603) 35.6 % 30 aa 2066 aa
Streptococcus agalactiae A909 (saga2) Bacteria 1996 61.4 % (1226) 75.7 % (1510) 26.8 % (535) 35.6 % 31 aa 1774 aa
Streptococcus gordonii str. Challis substr. CH1 (sgor0) Bacteria 2051 60.5 % (1241) 71.8 % (1472) 29.5 % (605) 30 aa 3646 aa
Streptococcus mutans UA159 (smut0) Bacteria 1960 58.7 % (1150) 73.3 % (1437) 27.3 % (535) 36.8 % 25 aa 2724 aa
Streptococcus pneumoniae TIGR4 (spne0) Bacteria 2125 57.4 % (1219) 69.9 % (1485) 25.0 % (532) 39.7 % 27 aa 4776 aa
Streptococcus pneumoniae R6 (spne1) Bacteria 2043 60.1 % (1227) 73.3 % (1498) 25.2 % (515) 39.7 % 20 aa 2551 aa
Streptococcus pneumoniae D39 (spne2) Bacteria 1914 62.3 % (1192) 74.1 % (1418) 26.1 % (500) 39.7 % 37 aa 2551 aa
Streptococcus pyogenes M1 GAS (spyo0) Bacteria 1696 60.4 % (1025) 74.8 % (1268) 24.1 % (408) 38.5 % 27 aa 2045 aa
Streptococcus pyogenes MGAS8232 (spyo1) Bacteria 1845 58.0 % (1071) 72.4 % (1336) 23.2 % (428) 38.5 % 33 aa 1647 aa
Streptococcus pyogenes MGAS315 (spyo2) Bacteria 1865 57.2 % (1067) 71.9 % (1341) 23.0 % (429) 38.6 % 38 aa 1622 aa
Streptococcus pyogenes SSI-1 (spyo3) Bacteria 1861 56.6 % (1054) 70.8 % (1318) 22.9 % (426) 38.6 % 27 aa 1623 aa
Streptococcus pyogenes MGAS10394 (spyo4) Bacteria 1886 56.2 % (1059) 70.4 % (1327) 23.8 % (448) 38.7 % 30 aa 1648 aa
Streptococcus pyogenes MGAS5005 (spyo5) Bacteria 1865 57.2 % (1066) 70.6 % (1317) 24.4 % (455) 38.5 % 33 aa 2059 aa
Streptococcus pyogenes MGAS6180 (spyo6) Bacteria 1894 56.4 % (1069) 70.2 % (1330) 25.4 % (481) 38.4 % 35 aa 2106 aa
Streptococcus pyogenes MGAS10270 (spyo7) Bacteria 1987 54.6 % (1085) 68.6 % (1364) 24.1 % (478) 38.4 % 31 aa 1715 aa
Streptococcus pyogenes MGAS10750 (spyo8) Bacteria 1979 55.4 % (1097) 69.8 % (1381) 23.6 % (467) 38.3 % 30 aa 2547 aa
Streptococcus pyogenes MGAS2096 (spyo9) Bacteria 1898 57.2 % (1085) 72.1 % (1368) 24.4 % (464) 38.7 % 31 aa 2416 aa
Streptococcus pyogenes MGAS9429 (spyoA) Bacteria 1877 56.2 % (1054) 69.9 % (1312) 24.5 % (460) 38.5 % 21 aa 1755 aa
Streptococcus pyogenes str. Manfredo (spyoB) Bacteria 1746 58.8 % (1026) 72.9 % (1273) 24.2 % (423) 38.6 % 35 aa 1646 aa
Streptococcus sanguinis SK36 (ssan0) Bacteria 2270 60.6 % (1375) 72.4 % (1644) 30.0 % (680) 43.4 % 30 aa 3047 aa
Streptococcus suis 05ZYH33 (ssui0) Bacteria 2186 59.0 % (1289) 72.6 % (1587) 25.1 % (548) 41.1 % 30 aa 2274 aa
Streptococcus suis 98HAH33 (ssui1) Bacteria 2189 58.2 % (1274) 71.9 % (1573) 24.6 % (538) 41.1 % 30 aa 1969 aa
Streptococcus thermophilus CNRZ1066 (sthe0) Bacteria 1915 58.3 % (1116) 71.6 % (1372) 24.1 % (462) 39.1 % 20 aa 1464 aa
Streptococcus thermophilus LMG 18311 (sthe1) Bacteria 1889 58.9 % (1113) 72.2 % (1363) 24.7 % (466) 39.1 % 30 aa 1470 aa
Streptococcus thermophilus LMD-9 (sthe2) Bacteria 1716 57.6 % (988) 68.6 % (1178) 24.8 % (425) 39.1 % 17 aa 1618 aa
Symbiobacterium thermophilum IAM 14863 (symb0) Bacteria 3337 54.8 % (1829) 71.4 % (2382) 27.9 % (932) 68.7 % 30 aa 2244 aa
Acholeplasma laidlawii PG-8A (alai0) Bacteria 1380 60.8 % (839) 73.8 % (1019) 31.2 % (431) 25 aa 5552 aa
Acholeplasma laidlawii PG-8A (alai0) Bacteria 1380 60.8 % (839) 73.8 % (1019) 31.2 % (431) 25 aa 5552 aa
Onion yellows phytoplasma OY-M (past0) Bacteria 751 59.0 % (443) 69.9 % (525) 28.5 % (214) 27.7 % 33 aa 1571 aa
Mesoplasma florum L1 (mflo0) Bacteria 683 67.5 % (461) 79.6 % (544) 24.5 % (167) 27.0 % 37 aa 1814 aa
Mycoplasma fermentans (bppm1) Bacteria 17 41.2 % (7) 64.7 % (11) 11.8 % (2) 53 aa 615 aa
Mycoplasma agalactiae (maga0) Bacteria 742 58.8 % (436) 74.3 % (551) 21.4 % (159) 49 aa 3329 aa
Mycoplasma capricolum subsp. capricolum ATCC 27343 (mcap1) Bacteria 812 59.2 % (481) 76.7 % (623) 25.1 % (204) 23.8 % 33 aa 1965 aa
Mycoplasma gallisepticum R (mgal0) Bacteria 726 61.0 % (443) 76.9 % (558) 25.1 % (182) 31.5 % 37 aa 1976 aa
Mycoplasma genitalium G37 (mgen0) Bacteria 476 69.7 % (332) 82.1 % (391) 22.7 % (108) 31.7 % 37 aa 1805 aa
Mycoplasma hyopneumoniae 232 (mhyo0) Bacteria 691 55.4 % (383) 70.2 % (485) 30.1 % (208) 28.6 % 46 aa 3969 aa
Mycoplasma hyopneumoniae 7448 (mhyo1) Bacteria 698 54.6 % (381) 70.1 % (489) 30.5 % (213) 28.5 % 37 aa 2651 aa
Mycoplasma hyopneumoniae J (mhyo2) Bacteria 674 56.2 % (379) 70.9 % (478) 29.4 % (198) 28.5 % 37 aa 2651 aa
Mycoplasma mobile 163K (mmob0) Bacteria 635 63.1 % (401) 76.9 % (488) 23.3 % (148) 25.0 % 38 aa 4727 aa
Mycoplasma mycoides subsp. mycoides SC str. PG1 (mmyc0) Bacteria 1016 48.9 % (497) 69.5 % (706) 28.1 % (286) 24.0 % 36 aa 1972 aa
Mycoplasma penetrans HF-2 (mpen0) Bacteria 1037 55.0 % (570) 72.6 % (753) 27.9 % (289) 25.7 % 47 aa 3317 aa
Mycoplasma pneumoniae M129 (mpne0) Bacteria 688 57.3 % (394) 71.4 % (491) 23.0 % (158) 40.0 % 37 aa 1882 aa
Mycoplasma pulmonis (mpul0) Bacteria 782 57.3 % (448) 73.3 % (573) 28.5 % (223) 26.6 % 37 aa 3216 aa
Mycoplasma synoviae 53 (msyn0) Bacteria 681 57.7 % (393) 71.4 % (486) 21.4 % (146) 28.5 % 37 aa 2636 aa
Ureaplasma parvum serovar 3 str. ATCC 700970 (uure0) Bacteria 611 60.4 % (369) 75.0 % (458) 26.4 % (161) 25.5 % 34 aa 5005 aa
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (fnuc0) Bacteria 2067 58.0 % (1198) 71.5 % (1477) 25.8 % (534) 27.2 % 20 aa 3165 aa
Rhodopirellula baltica SH 1 (rbal0) Bacteria 7325 33.9 % (2482) 50.9 % (3731) 23.0 % (1685) 55.4 % 35 aa 8173 aa
Caulobacter sp. K31 (caul0) Bacteria 5438 54.9 % (2986) 72.0 % (3914) 23.4 % (1275) 30 aa 4687 aa
Caulobacter crescentus CB15 (ccre0) Bacteria 3737 57.2 % (2139) 72.1 % (2693) 22.9 % (854) 67.2 % 30 aa 2479 aa
Bartonella bacilliformis KC583 (bbac1) Bacteria 1283 60.5 % (776) 71.9 % (923) 24.5 % (314) 38.2 % 37 aa 2884 aa
Bartonella henselae (bhen0) Bacteria 1488 57.5 % (855) 72.1 % (1073) 26.2 % (390) 38.2 % 41 aa 3036 aa
Bartonella quintana str. Toulouse (bqui0) Bacteria 1142 67.6 % (772) 79.0 % (902) 28.6 % (327) 38.8 % 41 aa 2855 aa
Bartonella tribocorum CIP 105476 (btri0) Bacteria 2154 47.9 % (1031) 66.7 % (1437) 21.8 % (469) 12 aa 5035 aa
Bradyrhizobium japonicum USDA 110 (bjap0) Bacteria 8317 54.6 % (4541) 70.7 % (5879) 24.7 % (2052) 64.1 % 30 aa 5685 aa
Bradyrhizobium sp. ORS278 (brad0) Bacteria 6717 54.5 % (3661) 69.9 % (4694) 26.2 % (1757) 65.5 % 20 aa 5265 aa
Bradyrhizobium sp. BTAi1 (brad1) Bacteria 7622 54.4 % (4144) 70.5 % (5377) 26.2 % (1997) 22 aa 8646 aa
Nitrobacter hamburgensis X14 (nham0) Bacteria 4326 45.2 % (1955) 64.7 % (2797) 23.4 % (1014) 61.6 % 31 aa 2845 aa
Nitrobacter winogradskyi Nb-255 (nwin0) Bacteria 3122 52.0 % (1623) 71.0 % (2217) 21.2 % (663) 62.0 % 41 aa 2002 aa
Rhodopseudomonas palustris CGA009 (rpal0) Bacteria 4822 59.4 % (2862) 74.3 % (3581) 26.2 % (1264) 65.0 % 25 aa 4335 aa
Rhodopseudomonas palustris BisB18 (rpal1) Bacteria 4886 54.4 % (2658) 70.8 % (3458) 26.4 % (1288) 65.0 % 35 aa 4435 aa
Rhodopseudomonas palustris BisB5 (rpal2) Bacteria 4397 57.0 % (2505) 71.4 % (3140) 26.7 % (1174) 64.8 % 35 aa 3094 aa
Rhodopseudomonas palustris HaA2 (rpal3) Bacteria 4683 59.0 % (2761) 73.9 % (3461) 26.8 % (1255) 66.0 % 35 aa 5769 aa
Rhodopseudomonas palustris BisA53 (rpal4) Bacteria 4878 53.0 % (2583) 69.7 % (3398) 26.8 % (1306) 64.4 % 31 aa 4651 aa
Brucella abortus biovar 1 str. 9-941 (babo0) Bacteria 3085 57.1 % (1762) 69.4 % (2141) 23.4 % (723) 57.2 % 28 aa 3422 aa
Brucella canis ATCC 23365 (bcan0) Bacteria 3251 56.3 % (1829) 68.7 % (2234) 23.9 % (778) 13 aa 2867 aa
Brucella melitensis 16M (bmel0) Bacteria 3198 60.0 % (1919) 73.9 % (2364) 22.4 % (715) 57.2 % 41 aa 2867 aa
Brucella melitensis biovar Abortus 2308 (bmel1) Bacteria 3034 58.2 % (1767) 70.6 % (2142) 23.1 % (701) 57.2 % 30 aa 3422 aa
Brucella ovis ATCC 25840 (bovi0) Bacteria 2892 58.7 % (1699) 71.7 % (2073) 23.9 % (691) 20 aa 3415 aa
Brucella suis 1330 (bsui0) Bacteria 3273 54.4 % (1782) 67.5 % (2209) 23.5 % (768) 57.3 % 29 aa 3420 aa
Brucella suis ATCC 23445 (bsui1) Bacteria 3241 54.8 % (1775) 68.0 % (2203) 23.7 % (769) 13 aa 2867 aa
Ochrobactrum anthropi ATCC 49188 (oant0) Bacteria 4799 57.6 % (2763) 72.5 % (3479) 25.5 % (1223) 37 aa 2906 aa
Methylobacterium sp. 4-46 (meth0) Bacteria 6692 48.8 % (3268) 65.3 % (4367) 25.0 % (1673) 29 aa 4855 aa
Methylobacterium extorquens PA1 (mext0) Bacteria 4829 51.7 % (2498) 68.2 % (3291) 23.5 % (1134) 38 aa 15831 aa
Mesorhizobium sp. BNC1 (meso0) Bacteria 4543 58.2 % (2645) 74.8 % (3396) 23.8 % (1083) 61.1 % 41 aa 2950 aa
Mesorhizobium loti MAFF303099 (mlot0) Bacteria 7281 53.9 % (3927) 70.3 % (5118) 22.7 % (1650) 62.5 % 30 aa 3930 aa
Parvibaculum lavamentivorans DS-1 (plav0) Bacteria 3636 59.9 % (2177) 76.5 % (2781) 24.5 % (892) 29 aa 3325 aa
Rhizobium etli CFN 42 (retl0) Bacteria 5963 58.6 % (3495) 74.7 % (4452) 23.4 % (1395) 61.0 % 32 aa 2825 aa
Agrobacterium tumefaciens str. C58 (atum0) Bacteria 5355 59.2 % (3172) 73.9 % (3958) 24.0 % (1286) 59.0 % 33 aa 2831 aa
Agrobacterium tumefaciens str. C58 (atum1) Bacteria 5402 59.0 % (3185) 72.9 % (3939) 23.1 % (1246) 59.0 % 22 aa 2831 aa
Rhizobium leguminosarum bv. viciae 3841 (rleg0) Bacteria 7150 58.1 % (4156) 74.3 % (5316) 23.7 % (1697) 60.9 % 40 aa 2839 aa
Sinorhizobium meliloti (smel0) Bacteria 6205 58.7 % (3643) 74.7 % (4638) 23.8 % (1478) 62.2 % 31 aa 2832 aa
Sinorhizobium medicae WSM419 (smed0) Bacteria 6213 57.6 % (3579) 72.6 % (4508) 24.0 % (1491) 37 aa 8915 aa
Azorhizobium caulinodans ORS 571 (acau0) Bacteria 4717 60.6 % (2857) 76.0 % (3587) 26.1 % (1233) 30 aa 5585 aa
Xanthobacter autotrophicus Py2 (xaut0) Bacteria 5035 54.6 % (2750) 71.8 % (3613) 25.3 % (1273) 35 aa 3208 aa
Hyphomonas neptunium ATCC 15444 (hnep0) Bacteria 3505 56.1 % (1967) 72.6 % (2546) 25.9 % (909) 61.9 % 30 aa 2085 aa
Maricaulis maris MCS10 (mmar3) Bacteria 3063 58.2 % (1782) 73.3 % (2244) 28.0 % (858) 62.7 % 41 aa 4368 aa
Dinoroseobacter shibae DFL 12 (dshi0) Bacteria 4187 53.2 % (2228) 71.8 % (3006) 26.2 % (1096) 28 aa 2553 aa
Jannaschia sp. CCS1 (jann0) Bacteria 4283 56.0 % (2400) 72.6 % (3109) 24.3 % (1039) 62.2 % 41 aa 3486 aa
Paracoccus denitrificans PD1222 (pden0) Bacteria 5077 57.0 % (2893) 73.5 % (3731) 23.4 % (1190) 66.8 % 36 aa 2779 aa
Rhodobacter sphaeroides 2.4.1 (rsph0) Bacteria 4242 55.6 % (2360) 71.6 % (3039) 23.8 % (1011) 68.8 % 20 aa 2769 aa
Rhodobacter sphaeroides ATCC 17029 (rsph1) Bacteria 4132 56.7 % (2342) 73.4 % (3034) 0.0 % (0) 69.0 % 26 aa 3634 aa
Rhodobacter sphaeroides ATCC 17025 (rsph2) Bacteria 4333 51.5 % (2231) 70.0 % (3035) 23.4 % (1012) 68.2 % 26 aa 2761 aa
Roseobacter denitrificans OCh 114 (rden0) Bacteria 4129 56.6 % (2338) 71.8 % (2964) 23.9 % (987) 58.9 % 30 aa 6682 aa
Silicibacter sp. TM1040 (sili0) Bacteria 3864 58.7 % (2269) 73.9 % (2856) 22.3 % (862) 60.1 % 41 aa 2150 aa
Silicibacter pomeroyi DSS-3 (spom1) Bacteria 4252 61.1 % (2598) 76.3 % (3245) 23.9 % (1017) 64.1 % 30 aa 8093 aa
Acidiphilium cryptum JF-5 (acry0) Bacteria 3559 54.6 % (1942) 72.8 % (2591) 23.0 % (817) 68.0 % 39 aa 2887 aa
Gluconacetobacter diazotrophicus PAl 5 (gdia0) Bacteria 3855 50.8 % (1960) 68.2 % (2628) 21.7 % (835) 19 aa 4453 aa
Gluconobacter oxydans 621H (goxy0) Bacteria 2664 54.2 % (1443) 71.9 % (1915) 20.0 % (532) 60.8 % 26 aa 1750 aa
Granulibacter bethesdensis CGDNIH1 (gbet0) Bacteria 2437 59.5 % (1451) 73.5 % (1791) 21.7 % (530) 59.1 % 30 aa 4061 aa
Magnetospirillum magneticum AMB-1 (mmag0) Bacteria 4559 52.0 % (2371) 68.6 % (3128) 24.5 % (1116) 65.1 % 34 aa 9529 aa
Rhodospirillum rubrum ATCC 11170 (rrub0) Bacteria 3841 57.4 % (2206) 74.3 % (2852) 25.1 % (963) 65.4 % 20 aa 1981 aa
Anaplasma marginale str. St. Maries (amar0) Bacteria 949 58.7 % (557) 73.2 % (695) 33.2 % (315) 49.8 % 39 aa 3492 aa
Anaplasma phagocytophilum HZ (apha0) Bacteria 1264 44.8 % (566) 54.3 % (686) 26.3 % (333) 41.6 % 30 aa 3373 aa
Ehrlichia canis str. Jake (ecan0) Bacteria 925 60.2 % (557) 73.3 % (678) 32.3 % (299) 29.0 % 42 aa 4245 aa
Ehrlichia chaffeensis str. Arkansas (echa0) Bacteria 1105 50.0 % (552) 61.1 % (675) 31.3 % (346) 30.1 % 30 aa 4313 aa
Ehrlichia ruminantium str. Welgevonden (erum0) Bacteria 888 60.5 % (537) 75.7 % (672) 34.3 % (305) 27.5 % 42 aa 3715 aa
Ehrlichia ruminantium str. Welgevonden (erum1) Bacteria 958 57.5 % (551) 69.8 % (669) 35.8 % (343) 27.5 % 42 aa 3558 aa
Ehrlichia ruminantium str. Gardel (erum2) Bacteria 950 58.3 % (554) 72.7 % (691) 35.5 % (337) 27.5 % 42 aa 3448 aa
Neorickettsia sennetsu str. Miyayama (nsen0) Bacteria 932 52.0 % (485) 60.6 % (565) 29.5 % (275) 41.1 % 29 aa 1921 aa
Orientia tsutsugamushi Boryong (otsu0) Bacteria 1182 49.5 % (585) 62.8 % (742) 28.8 % (341) 30.5 % 32 aa 2299 aa
Rickettsia bellii RML369-C (rbel0) Bacteria 1429 53.8 % (769) 71.6 % (1023) 27.3 % (390) 31.6 % 40 aa 1981 aa
Rickettsia bellii OSU 85-389 (rbel1) Bacteria 1476 49.2 % (726) 66.1 % (975) 25.2 % (372) 25 aa 1583 aa
Rickettsia akari str. Hartford (raka0) Bacteria 1259 47.7 % (601) 58.6 % (738) 26.6 % (335) 20 aa 1893 aa
Rickettsia conorii str. Malish 7 (rcon0) Bacteria 1374 46.1 % (633) 59.0 % (810) 28.0 % (385) 32.4 % 41 aa 2021 aa
Rickettsia felis URRWXCal2 (rfel0) Bacteria 1512 51.1 % (773) 71.8 % (1085) 26.4 % (399) 32.5 % 40 aa 3122 aa
Rickettsia massiliae MTU5 (rmas0) Bacteria 980 62.0 % (608) 75.9 % (744) 33.3 % (326) 40 aa 2794 aa
Rickettsia rickettsii str. Iowa (rric0) Bacteria 1384 44.3 % (613) 55.0 % (761) 27.7 % (384) 17 aa 1873 aa
Rickettsia rickettsii str. Sheila (rric1) Bacteria 1345 45.4 % (610) 56.5 % (760) 26.3 % (354) 20 aa 2249 aa
Rickettsia canadensis str. McKiel (rcan0) Bacteria 1093 51.1 % (559) 60.8 % (664) 27.6 % (302) 20 aa 2218 aa
Rickettsia prowazekii (rpro0) Bacteria 834 65.7 % (548) 78.8 % (657) 32.5 % (271) 29.0 % 41 aa 2340 aa
Rickettsia typhi str. Wilmington (rtyp0) Bacteria 838 65.4 % (548) 77.4 % (649) 32.6 % (273) 28.9 % 24 aa 2331 aa
Wolbachia endosymbiont of Drosophila melanogaster (wend0) Bacteria 1195 50.4 % (602) 62.4 % (746) 24.7 % (295) 35.2 % 30 aa 2843 aa
Wolbachia endosymbiont strain TRS of Brugia malayi (wend1) Bacteria 805 61.6 % (496) 71.3 % (574) 25.8 % (208) 34.2 % 42 aa 2839 aa
Candidatus Pelagibacter ubique HTCC1062 (pubi0) Bacteria 1354 66.1 % (895) 77.3 % (1047) 26.2 % (355) 29.7 % 29 aa 7317 aa
Erythrobacter litoralis HTCC2594 (elit0) Bacteria 3011 55.0 % (1656) 70.2 % (2115) 24.2 % (728) 63.1 % 23 aa 2409 aa
Novosphingobium aromaticivorans DSM 12444 (naro0) Bacteria 3937 58.4 % (2299) 73.5 % (2895) 21.3 % (839) 65.2 % 41 aa 3069 aa
Sphingomonas wittichii RW1 (swit0) Bacteria 5345 59.9 % (3201) 77.0 % (4115) 19.8 % (1058) 33 aa 1934 aa
Sphingopyxis alaskensis RB2256 (sala0) Bacteria 3195 57.1 % (1825) 73.5 % (2349) 23.4 % (747) 65.5 % 41 aa 2090 aa
Zymomonas mobilis subsp. mobilis ZM4 (zmob0) Bacteria 1998 57.0 % (1138) 67.3 % (1345) 20.3 % (406) 46.3 % 33 aa 2984 aa
Bordetella avium 197N (bavi0) Bacteria 3382 61.4 % (2076) 74.2 % (2509) 25.1 % (849) 61.6 % 24 aa 6460 aa
Bordetella bronchiseptica (bbro0) Bacteria 4994 64.8 % (3235) 78.0 % (3897) 22.9 % (1146) 68.1 % 31 aa 4218 aa
Bordetella parapertussis (bpar0) Bacteria 4185 66.5 % (2784) 79.5 % (3326) 23.3 % (975) 68.1 % 37 aa 4218 aa
Bordetella pertussis (bper0) Bacteria 3447 67.7 % (2332) 80.9 % (2790) 22.2 % (766) 67.7 % 37 aa 4196 aa
Bordetella petrii (bpet0) Bacteria 5031 60.3 % (3035) 76.3 % (3838) 23.7 % (1190) 37 aa 3039 aa
Burkholderia mallei ATCC 23344 (bmal0) Bacteria 5025 54.7 % (2747) 69.7 % (3502) 20.3 % (1022) 68.5 % 15 aa 4580 aa
Burkholderia mallei NCTC 10229 (bmal1) Bacteria 5510 49.8 % (2746) 65.8 % (3623) 20.3 % (1119) 68.5 % 23 aa 5778 aa
Burkholderia mallei NCTC 10247 (bmal2) Bacteria 5852 47.8 % (2795) 63.0 % (3687) 19.4 % (1135) 68.5 % 37 aa 5860 aa
Burkholderia mallei SAVP1 (bmal3) Bacteria 5189 50.2 % (2607) 64.1 % (3325) 20.0 % (1037) 68.4 % 29 aa 5822 aa
Burkholderia xenovorans LB400 (bxen0) Bacteria 8702 56.6 % (4921) 72.8 % (6339) 23.5 % (2041) 62.6 % 30 aa 4726 aa
Burkholderia cenocepacia AU 1054 (bcen0) Bacteria 6477 59.6 % (3859) 75.0 % (4859) 24.4 % (1580) 66.9 % 30 aa 4509 aa
Burkholderia cenocepacia HI2424 (bcen1) Bacteria 6919 58.8 % (4067) 73.9 % (5112) 24.2 % (1671) 66.8 % 30 aa 4509 aa
Burkholderia ambifaria AMMD (bcep0) Bacteria 6617 58.8 % (3890) 74.4 % (4923) 24.1 % (1595) 66.8 % 30 aa 4478 aa
Burkholderia multivorans ATCC 17616 (bmul0) Bacteria 6259 56.5 % (3535) 72.0 % (4509) 24.3 % (1518) 27 aa 4531 aa
Burkholderia sp. 383 (burk0) Bacteria 7717 58.8 % (4537) 73.8 % (5698) 24.3 % (1876) 66.3 % 30 aa 4283 aa
Burkholderia vietnamiensis G4 (bvie0) Bacteria 7617 48.7 % (3707) 66.7 % (5082) 22.7 % (1730) 65.7 % 30 aa 4497 aa
Burkholderia pseudomallei K96243 (bpse0) Bacteria 5729 57.1 % (3269) 73.6 % (4218) 24.5 % (1406) 68.1 % 30 aa 6274 aa
Burkholderia pseudomallei 1710b (bpse1) Bacteria 6347 50.4 % (3197) 66.0 % (4191) 22.0 % (1396) 68.0 % 29 aa 6274 aa
Burkholderia pseudomallei 1106a (bpse2) Bacteria 7183 45.1 % (3241) 58.0 % (4167) 19.6 % (1407) 68.3 % 37 aa 6272 aa
Burkholderia pseudomallei 668 (bpse3) Bacteria 7230 45.0 % (3257) 57.4 % (4149) 19.8 % (1433) 68.3 % 37 aa 6271 aa
Burkholderia thailandensis E264 (btha0) Bacteria 5634 55.8 % (3141) 72.8 % (4104) 23.4 % (1317) 67.6 % 30 aa 5628 aa
Ralstonia eutropha JMP134 (reut0) Bacteria 6446 62.3 % (4013) 76.9 % (4958) 23.1 % (1488) 64.4 % 38 aa 3081 aa
Ralstonia eutropha H16 (reut1) Bacteria 6626 61.9 % (4103) 76.3 % (5055) 23.4 % (1551) 66.3 % 30 aa 3406 aa
Ralstonia metallidurans CH34 (rmet0) Bacteria 6319 57.7 % (3645) 73.7 % (4658) 24.5 % (1551) 63.5 % 31 aa 3714 aa
Polynucleobacter sp. QLW-P1DMWA-1 (poly0) Bacteria 2077 64.3 % (1335) 75.3 % (1563) 27.1 % (563) 44.8 % 44 aa 10429 aa
Ralstonia solanacearum (rsol0) Bacteria 5120 54.4 % (2786) 70.7 % (3618) 25.0 % (1282) 67.0 % 20 aa 6889 aa
Acidovorax avenae subsp. citrulli AAC00-1 (aave0) Bacteria 4709 54.0 % (2544) 70.8 % (3335) 23.6 % (1111) 68.5 % 37 aa 3401 aa
Acidovorax sp. JS42 (acid0) Bacteria 4155 54.2 % (2253) 71.2 % (2960) 24.1 % (1003) 66.1 % 24 aa 2026 aa
Delftia acidovorans SPH-1 (daci0) Bacteria 6040 56.8 % (3430) 72.5 % (4379) 23.0 % (1388) 35 aa 6176 aa
Polaromonas naphthalenivorans CJ2 (pnap0) Bacteria 4929 53.9 % (2655) 71.4 % (3517) 22.1 % (1088) 61.7 % 33 aa 2731 aa
Polaromonas sp. JS666 (pola0) Bacteria 5453 57.5 % (3136) 73.6 % (4012) 23.3 % (1273) 62.0 % 34 aa 2793 aa
Rhodoferax ferrireducens T118 (rfer0) Bacteria 4418 60.4 % (2667) 76.1 % (3364) 26.2 % (1158) 59.6 % 38 aa 3026 aa
Verminephrobacter eiseniae EF01-2 (veis0) Bacteria 4947 59.1 % (2926) 75.7 % (3747) 21.3 % (1053) 65.2 % 39 aa 7434 aa
Methylibium petroleiphilum PM1 (mpet0) Bacteria 4449 54.0 % (2401) 70.0 % (3114) 23.8 % (1057) 68.8 % 29 aa 2092 aa
Herminiimonas arsenicoxydans (hars0) Bacteria 3325 56.2 % (1868) 70.1 % (2332) 27.5 % (914) 20 aa 2925 aa
Janthinobacterium sp. Marseille (jant0) Bacteria 3697 58.0 % (2144) 74.9 % (2769) 27.4 % (1012) 36 aa 4196 aa
Thiobacillus denitrificans ATCC 25259 (tden1) Bacteria 2827 59.1 % (1671) 74.0 % (2091) 27.0 % (762) 66.1 % 30 aa 3472 aa
Methylobacillus flagellatus KT (mfla0) Bacteria 2753 61.3 % (1688) 75.7 % (2083) 28.4 % (781) 55.7 % 35 aa 3332 aa
Chromobacterium violaceum ATCC 12472 (cvio0) Bacteria 4407 56.0 % (2467) 71.0 % (3129) 24.7 % (1087) 64.8 % 37 aa 4130 aa
Neisseria gonorrhoeae FA 1090 (ngon0) Bacteria 2002 53.4 % (1070) 65.8 % (1318) 21.0 % (421) 52.7 % 36 aa 1977 aa
Neisseria meningitidis MC58 (nmen0) Bacteria 2063 55.9 % (1153) 67.4 % (1390) 23.0 % (475) 51.5 % 22 aa 2703 aa
Neisseria meningitidis Z2491 (nmen1) Bacteria 1909 58.2 % (1111) 70.4 % (1343) 23.6 % (450) 51.8 % 30 aa 2015 aa
Neisseria meningitidis FAM18 (nmen2) Bacteria 1917 59.0 % (1131) 72.3 % (1386) 23.6 % (452) 51.6 % 30 aa 2029 aa
Neisseria meningitidis 053442 (nmen3) Bacteria 2020 55.4 % (1119) 67.6 % (1366) 21.2 % (429) 30 aa 1787 aa
Nitrosomonas europaea ATCC 19718 (neur0) Bacteria 2462 58.7 % (1446) 78.0 % (1920) 25.9 % (637) 50.7 % 42 aa 3064 aa
Nitrosomonas eutropha C91 (nuet0) Bacteria 2551 57.1 % (1457) 74.2 % (1892) 28.0 % (714) 48.5 % 31 aa 2985 aa
Nitrosospira multiformis ATCC 25196 (nmul0) Bacteria 2805 57.2 % (1604) 73.4 % (2060) 27.5 % (772) 53.9 % 41 aa 5216 aa
Azoarcus sp. EbN1 (azoa0) Bacteria 4598 48.7 % (2239) 66.2 % (3045) 20.6 % (949) 64.7 % 14 aa 2043 aa
Azoarcus sp. BH72 (azoa1) Bacteria 3989 60.8 % (2425) 75.6 % (3017) 26.5 % (1058) 67.9 % 31 aa 2109 aa
Dechloromonas aromatica RCB (daro0) Bacteria 4171 58.3 % (2433) 74.6 % (3111) 28.4 % (1185) 59.2 % 37 aa 4854 aa
Bdellovibrio bacteriovorus (bbac0) Bacteria 3583 48.4 % (1733) 67.7 % (2427) 29.3 % (1050) 50.6 % 30 aa 2828 aa
Desulfococcus oleovorans Hxd3 (dole0) Bacteria 3265 56.6 % (1847) 76.8 % (2509) 28.1 % (917) 34 aa 12741 aa
Desulfotalea psychrophila LSv54 (dpsy0) Bacteria 3236 53.3 % (1726) 68.1 % (2203) 29.8 % (964) 46.6 % 31 aa 4725 aa
Desulfovibrio desulfuricans G20 (ddes0) Bacteria 3775 50.2 % (1894) 65.4 % (2469) 23.7 % (894) 57.8 % 30 aa 3252 aa
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough (dvul0) Bacteria 3531 50.1 % (1770) 64.5 % (2279) 23.3 % (822) 63.3 % 18 aa 3038 aa
Desulfovibrio vulgaris subsp. vulgaris DP4 (dvul1) Bacteria 3091 57.7 % (1782) 73.7 % (2277) 25.6 % (790) 63.2 % 32 aa 3038 aa
Lawsonia intracellularis PHE/MN1-00 (lint2) Bacteria 1342 61.4 % (824) 77.1 % (1035) 28.6 % (384) 33.1 % 67 aa 8746 aa
Geobacter metallireducens GS-15 (gmet0) Bacteria 3532 61.1 % (2157) 77.3 % (2731) 27.1 % (958) 59.5 % 32 aa 3507 aa
Geobacter sulfurreducens PCA (gsul0) Bacteria 3447 57.8 % (1994) 74.0 % (2551) 28.4 % (979) 60.9 % 30 aa 5899 aa
Geobacter uraniireducens Rf4 (gura0) Bacteria 4357 56.6 % (2468) 76.9 % (3349) 28.7 % (1251) 54.2 % 31 aa 7157 aa
Pelobacter carbinolicus DSM 2380 (pcar0) Bacteria 3353 57.0 % (1911) 72.9 % (2444) 26.2 % (877) 55.1 % 29 aa 1925 aa
Pelobacter propionicus DSM 2379 (ppro1) Bacteria 3804 53.4 % (2030) 73.4 % (2794) 26.1 % (993) 58.5 % 37 aa 2954 aa
Anaeromyxobacter dehalogenans 2CP-C (adeh0) Bacteria 4346 53.9 % (2342) 70.4 % (3058) 25.5 % (1109) 74.9 % 38 aa 4074 aa
Anaeromyxobacter sp. Fw109-5 (anae0) Bacteria 4466 54.2 % (2422) 71.2 % (3182) 24.6 % (1099) 38 aa 12684 aa
Myxococcus xanthus DK 1622 (mxan0) Bacteria 7331 46.9 % (3436) 67.1 % (4920) 22.2 % (1624) 68.9 % 30 aa 14274 aa
Sorangium cellulosum So (scel0) Bacteria 9375 47.0 % (4404) 67.1 % (6295) 21.5 % (2014) 30 aa 8417 aa
Syntrophus aciditrophicus SB (saci1) Bacteria 3168 53.0 % (1678) 67.1 % (2125) 24.1 % (764) 51.5 % 39 aa 1606 aa
Syntrophobacter fumaroxidans MPOB (sfum0) Bacteria 4064 56.8 % (2308) 73.2 % (2976) 27.1 % (1101) 59.9 % 38 aa 2031 aa
Arcobacter butzleri RM4018 (abut0) Bacteria 2259 62.0 % (1400) 76.0 % (1717) 29.0 % (656) 30 aa 3033 aa
Campylobacter concisus 13826 (ccon0) Bacteria 2080 54.0 % (1124) 68.0 % (1414) 29.3 % (609) 37 aa 5080 aa
Campylobacter curvus 525.92 (ccur0) Bacteria 1931 56.2 % (1086) 70.1 % (1353) 29.5 % (569) 29 aa 1787 aa
Campylobacter fetus subsp. fetus 82-40 (cfet0) Bacteria 1719 60.9 % (1047) 75.1 % (1291) 28.9 % (496) 33.3 % 33 aa 1745 aa
Campylobacter hominis ATCC BAA-381 (chom1) Bacteria 1687 54.1 % (912) 65.5 % (1105) 29.8 % (502) 37 aa 3010 aa
Campylobacter jejuni subsp. jejuni NCTC 11168 (cjej0) Bacteria 1624 59.3 % (963) 75.4 % (1225) 27.9 % (453) 30.5 % 14 aa 1517 aa
Campylobacter jejuni RM1221 (cjej1) Bacteria 1838 54.2 % (996) 69.5 % (1277) 26.1 % (480) 30.3 % 30 aa 1899 aa
Campylobacter jejuni subsp. jejuni 81-176 (cjej2) Bacteria 1758 58.8 % (1034) 72.4 % (1272) 28.0 % (492) 37 aa 1932 aa
Campylobacter jejuni subsp. jejuni 81116 (cjej3) Bacteria 1626 63.7 % (1036) 76.6 % (1246) 27.6 % (448) 31 aa 1517 aa
Campylobacter jejuni subsp. doylei 269.97 (cjej4) Bacteria 1731 58.6 % (1014) 71.3 % (1235) 25.0 % (433) 37 aa 1495 aa
Helicobacter acinonychis str. Sheeba (haci0) Bacteria 1618 51.0 % (825) 64.8 % (1049) 23.1 % (374) 38.2 % 30 aa 3216 aa
Helicobacter hepaticus ATCC 51449 (hhep0) Bacteria 1875 53.6 % (1005) 65.9 % (1235) 28.5 % (535) 35.9 % 30 aa 2894 aa
Helicobacter pylori 26695 (hpyl0) Bacteria 1566 53.8 % (843) 69.6 % (1090) 24.6 % (386) 38.9 % 12 aa 2893 aa
Helicobacter pylori J99 (hpyl1) Bacteria 1491 56.1 % (837) 71.8 % (1070) 25.4 % (379) 39.2 % 21 aa 3194 aa
Helicobacter pylori HPAG1 (hpyl2) Bacteria 1544 54.7 % (845) 69.4 % (1071) 25.2 % (389) 39.1 % 21 aa 3185 aa
Sulfurimonas denitrificans DSM 1251 (tden2) Bacteria 2096 62.2 % (1304) 77.7 % (1628) 27.3 % (572) 34.5 % 37 aa 1864 aa
Wolinella succinogenes (wsuc0) Bacteria 2044 62.4 % (1275) 76.9 % (1571) 28.5 % (583) 48.5 % 33 aa 2883 aa
Nitratiruptor sp. SB155-2 (nitr0) Bacteria 1843 61.1 % (1126) 77.8 % (1434) 27.7 % (511) 37 aa 1507 aa
Sulfurovum sp. NBC37-1 (sulf0) Bacteria 2438 57.0 % (1389) 73.4 % (1789) 30.4 % (740) 37 aa 2052 aa
Aeromonas hydrophila subsp. hydrophila ATCC 7966 (ahyd0) Bacteria 4122 59.7 % (2460) 75.6 % (3118) 28.4 % (1169) 61.5 % 15 aa 5047 aa
Aeromonas salmonicida subsp. salmonicida A449 (asal0) Bacteria 4413 55.1 % (2431) 71.5 % (3155) 26.9 % (1189) 15 aa 3195 aa
Marinobacter aquaeolei VT8 (maqu0) Bacteria 4272 54.2 % (2316) 73.8 % (3154) 25.4 % (1083) 56.9 % 36 aa 2570 aa
Saccharophagus degradans 2-40 (sdeg0) Bacteria 4007 56.3 % (2255) 73.6 % (2951) 30.6 % (1226) 45.8 % 38 aa 14609 aa
Colwellia psychrerythraea 34H (cpsy0) Bacteria 4910 52.8 % (2591) 66.4 % (3260) 27.8 % (1365) 38.0 % 15 aa 3758 aa
Idiomarina loihiensis L2TR (iloi0) Bacteria 2628 62.6 % (1644) 76.6 % (2013) 28.6 % (751) 47.0 % 34 aa 1615 aa
Pseudoalteromonas atlantica T6c (patl0) Bacteria 4281 61.6 % (2635) 75.9 % (3250) 27.8 % (1192) 44.6 % 33 aa 4689 aa
Pseudoalteromonas haloplanktis TAC125 (phal0) Bacteria 3486 58.3 % (2034) 71.2 % (2482) 28.3 % (986) 40.1 % 20 aa 2410 aa
Psychromonas ingrahamii 37 (ping0) Bacteria 3545 59.4 % (2107) 74.2 % (2630) 27.5 % (974) 40.1 % 32 aa 4500 aa
Shewanella amazonensis SB2B (sama0) Bacteria 3645 62.2 % (2268) 76.9 % (2804) 29.0 % (1056) 53.6 % 34 aa 4214 aa
Shewanella baltica OS155 (sbal0) Bacteria 4489 57.3 % (2572) 74.7 % (3353) 27.3 % (1224) 46.2 % 31 aa 2693 aa
Shewanella baltica OS185 (sbal1) Bacteria 4394 57.3 % (2516) 73.0 % (3207) 28.6 % (1257) 32 aa 6683 aa
Shewanella baltica OS195 (sbal2) Bacteria 4688 54.7 % (2564) 71.5 % (3350) 27.8 % (1303) 25 aa 6662 aa
Shewanella denitrificans OS217 (sden0) Bacteria 3754 57.4 % (2154) 74.9 % (2812) 27.4 % (1027) 45.1 % 36 aa 5236 aa
Shewanella frigidimarina NCIMB 400 (sfri0) Bacteria 4029 59.3 % (2389) 75.2 % (3029) 29.7 % (1195) 41.6 % 36 aa 5787 aa
Shewanella halifaxensis HAW-EB4 (shal0) Bacteria 4278 59.5 % (2544) 73.8 % (3158) 29.7 % (1270) 26 aa 4044 aa
Shewanella sp. ANA-3 (shew0) Bacteria 4360 57.6 % (2513) 73.7 % (3213) 28.7 % (1250) 47.9 % 30 aa 5839 aa
Shewanella sp. MR-4 (shew1) Bacteria 3924 60.4 % (2372) 75.1 % (2948) 29.8 % (1168) 47.9 % 28 aa 5442 aa
Shewanella sp. MR-7 (shew2) Bacteria 4014 59.1 % (2373) 74.1 % (2974) 29.5 % (1184) 47.9 % 30 aa 4791 aa
Shewanella sp. W3-18-1 (shew3) Bacteria 4044 56.2 % (2271) 72.7 % (2940) 28.6 % (1158) 44.6 % 30 aa 2644 aa
Shewanella loihica PV-4 (sloi0) Bacteria 3859 60.5 % (2333) 75.4 % (2909) 29.6 % (1144) 53.7 % 34 aa 4836 aa
Shewanella oneidensis MR-1 (sone0) Bacteria 4779 49.6 % (2370) 66.8 % (3193) 25.7 % (1227) 45.9 % 30 aa 5020 aa
Shewanella pealeana ATCC 700345 (spea0) Bacteria 4241 57.1 % (2422) 73.4 % (3114) 29.6 % (1254) 31 aa 5444 aa
Shewanella putrefaciens CN-32 (sput0) Bacteria 3972 58.8 % (2334) 73.8 % (2931) 29.4 % (1166) 44.5 % 30 aa 4220 aa
Shewanella sediminis HAW-EB3 (ssed0) Bacteria 4497 58.6 % (2635) 75.1 % (3379) 30.4 % (1366) 32 aa 4122 aa
Baumannia cicadellinicola str. Hc (Homalodisca coagulata) (bcic0) Bacteria 595 85.0 % (506) 91.4 % (544) 20.5 % (122) 33.2 % 31 aa 1408 aa
Candidatus Carsonella ruddii PV (crud0) Bacteria 182 65.4 % (119) 72.0 % (131) 23.1 % (42) 16.6 % 37 aa 1292 aa
Dichelobacter nodosus VCS1703A (dnod0) Bacteria 1280 60.3 % (772) 78.0 % (999) 25.2 % (323) 44.4 % 31 aa 2762 aa
Nitrosococcus oceani ATCC 19707 (noce0) Bacteria 3017 54.2 % (1635) 73.3 % (2212) 28.4 % (857) 50.3 % 37 aa 1867 aa
Alkalilimnicola ehrlichei MLHE-1 (aehr0) Bacteria 2865 60.6 % (1737) 77.1 % (2209) 26.7 % (766) 67.5 % 30 aa 6062 aa
Halorhodospira halophila SL1 (hhal0) Bacteria 2407 61.8 % (1487) 77.4 % (1863) 24.0 % (578) 68.0 % 36 aa 1896 aa
Buchnera aphidicola str. Sg (Schizaphis graminum) (baph0) Bacteria 545 85.0 % (463) 91.2 % (497) 17.1 % (93) 25.3 % 38 aa 1413 aa
Buchnera aphidicola str. Bp (Baizongia pistaciae) (baph1) Bacteria 507 85.2 % (432) 90.3 % (458) 18.5 % (94) 25.3 % 38 aa 1404 aa
Buchnera aphidicola str. Cc (Cinara cedri) (baph2) Bacteria 357 86.6 % (309) 91.9 % (328) 14.0 % (50) 20.1 % 38 aa 1410 aa
Buchnera aphidicola str. APS (Acyrthosiphon pisum) (buch0) Bacteria 574 85.2 % (489) 89.7 % (515) 16.0 % (92) 26.4 % 38 aa 1407 aa
Citrobacter koseri ATCC BAA-895 (ckos0) Bacteria 5031 52.9 % (2662) 65.3 % (3287) 25.3 % (1274) 27 aa 3208 aa
Enterobacter sakazakii ATCC BAA-894 (esak0) Bacteria 4442 56.1 % (2494) 68.8 % (3054) 26.0 % (1156) 30 aa 2356 aa
Enterobacter sp. 638 (ente0) Bacteria 4240 62.1 % (2634) 75.4 % (3195) 26.0 % (1102) 52.9 % 35 aa 3967 aa
Escherichia coli K12 (ecol0) Bacteria 4133 62.7 % (2593) 76.1 % (3144) 27.3 % (1129) 50.8 % 14 aa 2358 aa
Escherichia coli O157:H7 str. Sakai (ecol1) Bacteria 5447 53.2 % (2896) 68.9 % (3755) 24.0 % (1309) 50.5 % 14 aa 5291 aa
Escherichia coli O157:H7 EDL933 (ecol2) Bacteria 5449 52.2 % (2842) 69.6 % (3794) 24.3 % (1323) 50.4 % 9 aa 5188 aa
Escherichia coli CFT073 (ecol3) Bacteria 5379 53.0 % (2852) 66.4 % (3574) 25.1 % (1351) 50.5 % 14 aa 3216 aa
Escherichia coli W3110 (ecol4) Bacteria 4227 62.0 % (2620) 75.8 % (3205) 26.7 % (1130) 50.8 % 14 aa 2367 aa
Escherichia coli UTI89 (ecol5) Bacteria 5211 54.3 % (2828) 66.8 % (3481) 25.6 % (1336) 50.6 % 21 aa 3262 aa
Escherichia coli 536 (ecol6) Bacteria 4629 59.4 % (2751) 73.2 % (3388) 26.7 % (1237) 50.5 % 21 aa 3242 aa
Escherichia coli APEC O1 (ecol7) Bacteria 4890 56.4 % (2759) 72.1 % (3524) 25.7 % (1257) 50.5 % 39 aa 3053 aa
Escherichia coli E24377A (ecol8) Bacteria 4997 55.2 % (2757) 68.6 % (3430) 23.9 % (1195) 29 aa 2296 aa
Escherichia coli HS (ecol9) Bacteria 4384 59.2 % (2596) 71.5 % (3135) 26.2 % (1147) 14 aa 1951 aa
Escherichia coli RS218 (ecolA) Bacteria 62 17.7 % (11) 37.1 % (23) 9.7 % (6) 32 aa 981 aa
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (kpne0) Bacteria 5185 61.0 % (3165) 74.3 % (3855) 26.5 % (1372) 19 aa 3944 aa
Erwinia carotovora subsp. atroseptica SCRI1043 (ecar0) Bacteria 4472 59.6 % (2667) 73.5 % (3285) 26.7 % (1195) 51.0 % 31 aa 7523 aa
Photorhabdus luminescens subsp. laumondii TTO1 (plum0) Bacteria 4683 51.8 % (2426) 69.4 % (3252) 20.9 % (981) 42.8 % 30 aa 16367 aa
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 (sent0) Bacteria 5601 47.6 % (2666) 58.5 % (3274) 24.6 % (1379) 27 aa 5559 aa
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (sent1) Bacteria 4510 54.8 % (2473) 68.0 % (3069) 25.9 % (1167) 30 aa 7354 aa
Salmonella enterica subsp. enterica serovar Typhi (styp0) Bacteria 4766 53.3 % (2541) 69.1 % (3295) 25.8 % (1230) 51.9 % 9 aa 3624 aa
Salmonella typhimurium LT2 (styp1) Bacteria 4554 59.5 % (2710) 73.6 % (3353) 27.2 % (1239) 52.2 % 14 aa 5559 aa
Salmonella enterica subsp. enterica serovar Typhi Ty2 (styp2) Bacteria 4323 58.5 % (2529) 72.3 % (3124) 26.7 % (1153) 52.1 % 13 aa 3624 aa
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 (styp3) Bacteria 4093 60.4 % (2473) 73.7 % (3018) 27.5 % (1125) 52.2 % 21 aa 4560 aa
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 (styp4) Bacteria 4666 55.8 % (2605) 70.1 % (3272) 26.2 % (1221) 52.1 % 21 aa 5559 aa
Serratia proteamaculans 568 (spro0) Bacteria 4942 62.5 % (3091) 76.8 % (3794) 26.6 % (1313) 29 aa 3602 aa
Shigella boydii Sb227 (sboy0) Bacteria 4284 54.7 % (2343) 71.3 % (3056) 25.5 % (1092) 51.1 % 14 aa 1653 aa
Shigella dysenteriae Sd197 (sdys0) Bacteria 4505 48.2 % (2170) 64.0 % (2882) 20.0 % (902) 51.0 % 14 aa 1588 aa
Shigella flexneri 2a str. 301 (sfle0) Bacteria 4445 53.8 % (2393) 72.4 % (3217) 25.4 % (1129) 50.7 % 13 aa 1522 aa
Shigella flexneri 2a str. 2457T (sfle1) Bacteria 4068 55.9 % (2274) 73.2 % (2978) 25.6 % (1043) 50.9 % 14 aa 1522 aa
Shigella flexneri 5 str. 8401 (sfle2) Bacteria 4116 56.8 % (2339) 74.3 % (3060) 26.0 % (1072) 50.9 % 28 aa 1554 aa
Shigella sonnei Ss046 (sson0) Bacteria 4475 53.4 % (2390) 74.4 % (3329) 22.8 % (1022) 50.8 % 14 aa 1653 aa
Sodalis glossinidius str. morsitans (sglo0) Bacteria 2516 57.5 % (1446) 71.9 % (1808) 21.1 % (532) 54.5 % 33 aa 1484 aa
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis (wbre0) Bacteria 611 79.9 % (488) 89.5 % (547) 23.7 % (145) 22.5 % 38 aa 1405 aa
Yersinia enterocolitica subsp. enterocolitica 8081 (yent0) Bacteria 4051 60.5 % (2450) 75.7 % (3068) 27.1 % (1098) 47.2 % 18 aa 3161 aa
Yersinia pestis CO92 (ypes0) Bacteria 4083 57.7 % (2354) 73.7 % (3010) 25.8 % (1054) 47.6 % 14 aa 3705 aa
Yersinia pestis KIM (ypes1) Bacteria 4281 53.5 % (2291) 69.8 % (2989) 25.8 % (1105) 47.7 % 14 aa 3710 aa
Yersinia pestis biovar Microtus str. 91001 (ypes2) Bacteria 4142 56.7 % (2347) 71.9 % (2977) 26.4 % (1092) 47.7 % 20 aa 3710 aa
Yersinia pseudotuberculosis IP 32953 (ypes3) Bacteria 4038 58.7 % (2369) 72.9 % (2942) 26.8 % (1082) 47.6 % 14 aa 5623 aa
Yersinia pestis Antiqua (ypes4) Bacteria 4364 57.9 % (2525) 74.3 % (3244) 24.8 % (1082) 47.7 % 22 aa 3705 aa
Yersinia pestis Nepal516 (ypes5) Bacteria 4094 58.5 % (2397) 74.4 % (3046) 25.5 % (1045) 47.6 % 29 aa 4270 aa
Yersinia pestis Angola (ypes6) Bacteria 4045 56.7 % (2295) 70.9 % (2867) 24.3 % (981) 24 aa 3163 aa
Yersinia pestis Pestoides F (ypes7) Bacteria 4069 57.2 % (2327) 74.1 % (3014) 25.5 % (1039) 28 aa 4656 aa
Yersinia pseudotuberculosis IP 31758 (ypes8) Bacteria 4324 55.0 % (2379) 69.0 % (2985) 26.8 % (1157) 15 aa 4953 aa
Candidatus Blochmannia floridanus (bflo0) Bacteria 583 84.4 % (492) 90.1 % (525) 23.0 % (134) 27.4 % 38 aa 1420 aa
Candidatus Blochmannia pennsylvanicus str. BPEN (bpen0) Bacteria 610 84.1 % (513) 90.0 % (549) 20.8 % (127) 29.6 % 38 aa 1416 aa
Coxiella burnetii RSA 493 (cbur0) Bacteria 2052 49.2 % (1009) 63.4 % (1300) 23.3 % (479) 42.6 % 30 aa 1734 aa
Coxiella burnetii Dugway 5J108-111 (cbur1) Bacteria 2125 50.3 % (1068) 64.0 % (1360) 24.8 % (527) 33 aa 1928 aa
Coxiella burnetii RSA 331 (cbur2) Bacteria 1975 48.5 % (957) 60.9 % (1203) 25.0 % (494) 26 aa 1619 aa
Legionella pneumophila str. Lens (lpne0) Bacteria 2934 55.6 % (1631) 72.9 % (2139) 28.5 % (836) 38.4 % 34 aa 7919 aa
Legionella pneumophila str. Paris (lpne1) Bacteria 3166 54.9 % (1738) 72.3 % (2290) 28.6 % (904) 38.3 % 23 aa 7679 aa
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (lpne2) Bacteria 2942 55.9 % (1645) 73.0 % (2148) 29.0 % (854) 38.3 % 34 aa 3780 aa
Legionella pneumophila str. Corby (lpne3) Bacteria 3206 52.0 % (1666) 68.8 % (2205) 28.2 % (903) 21 aa 6289 aa
Methylococcus capsulatus str. Bath (mcap0) Bacteria 2960 57.8 % (1710) 72.8 % (2156) 24.1 % (713) 63.6 % 24 aa 3349 aa
Alcanivorax borkumensis SK2 (abor0) Bacteria 2755 62.8 % (1730) 78.0 % (2150) 27.7 % (763) 54.7 % 33 aa 3600 aa
Hahella chejuensis KCTC 2396 (hche0) Bacteria 6778 47.3 % (3208) 64.6 % (4376) 24.2 % (1640) 53.9 % 29 aa 5711 aa
Chromohalobacter salexigens DSM 3043 (csal0) Bacteria 3298 63.4 % (2091) 76.9 % (2536) 25.2 % (831) 63.9 % 40 aa 3314 aa
Marinomonas sp. MWYL1 (mari0) Bacteria 4439 62.6 % (2778) 77.9 % (3459) 26.7 % (1186) 25 aa 6404 aa
Actinobacillus pleuropneumoniae L20 (aple0) Bacteria 2012 66.4 % (1336) 79.1 % (1592) 25.5 % (514) 41.3 % 37 aa 3347 aa
Actinobacillus pleuropneumoniae serovar 3 str. JL03 (aple1) Bacteria 2036 64.7 % (1318) 77.2 % (1572) 26.5 % (540) 25 aa 2597 aa
Actinobacillus succinogenes 130Z (asuc0) Bacteria 2079 69.1 % (1436) 81.0 % (1685) 25.6 % (533) 37 aa 5259 aa
Haemophilus ducreyi 35000HP (hduc0) Bacteria 1717 55.8 % (958) 66.4 % (1140) 24.9 % (427) 38.2 % 30 aa 4919 aa
Haemophilus influenzae Rd KW20 (hinf0) Bacteria 1709 67.1 % (1147) 77.8 % (1329) 23.1 % (394) 38.2 % 21 aa 1694 aa
Haemophilus influenzae 86-028NP (hinf1) Bacteria 1792 62.9 % (1128) 74.9 % (1343) 22.4 % (401) 38.2 % 30 aa 1794 aa
Haemophilus influenzae PittEE (hinf2) Bacteria 1619 61.6 % (997) 76.2 % (1234) 22.4 % (362) 18 aa 1758 aa
Haemophilus influenzae PittGG (hinf3) Bacteria 1667 63.0 % (1051) 74.1 % (1235) 23.1 % (385) 20 aa 1510 aa
Haemophilus somnus 129PT (hsom0) Bacteria 1798 63.9 % (1149) 76.1 % (1368) 23.4 % (420) 37.2 % 37 aa 5143 aa
Mannheimia succiniciproducens MBEL55E (msuc0) Bacteria 2384 60.3 % (1437) 71.2 % (1697) 24.1 % (574) 42.5 % 30 aa 5399 aa
Pasteurella multocida subsp. multocida str. Pm70 (pmul0) Bacteria 2014 66.1 % (1331) 78.3 % (1577) 27.3 % (549) 40.4 % 37 aa 3919 aa
Acinetobacter baumannii ATCC 17978 (abau0) Bacteria 3807 54.2 % (2063) 69.1 % (2629) 20.0 % (760) 38.9 % 25 aa 3216 aa
Acinetobacter sp. ADP1 (acin0) Bacteria 3277 59.7 % (1955) 73.1 % (2396) 25.6 % (840) 40.4 % 23 aa 3711 aa
Psychrobacter arcticus 273-4 (parc0) Bacteria 2120 60.9 % (1291) 75.5 % (1600) 23.4 % (497) 42.8 % 38 aa 6715 aa
Psychrobacter cryohalolentis K5 (pcry0) Bacteria 2511 62.4 % (1568) 75.8 % (1904) 25.1 % (630) 42.2 % 38 aa 2301 aa
Psychrobacter sp. PRwf-1 (psyc0) Bacteria 2385 61.8 % (1475) 75.7 % (1806) 23.4 % (559) 32 aa 5098 aa
Pseudomonas aeruginosa PAO1 (paer0) Bacteria 5568 60.4 % (3364) 76.1 % (4236) 26.8 % (1492) 66.6 % 10 aa 5627 aa
Pseudomonas aeruginosa UCBPP-PA14 (paer2) Bacteria 5892 58.2 % (3427) 74.1 % (4365) 27.0 % (1588) 66.3 % 23 aa 5212 aa
Pseudomonas aeruginosa PA7 (paer3) Bacteria 6286 54.3 % (3416) 69.0 % (4338) 25.3 % (1588) 23 aa 4991 aa
Pseudomonas entomophila L48 (pent0) Bacteria 5134 58.0 % (2979) 73.1 % (3752) 26.1 % (1339) 64.2 % 23 aa 8493 aa
Pseudomonas fluorescens Pf-5 (pflu0) Bacteria 6138 59.0 % (3619) 73.3 % (4500) 26.5 % (1628) 63.3 % 23 aa 6675 aa
Pseudomonas fluorescens PfO-1 (pflu1) Bacteria 5736 59.3 % (3399) 74.2 % (4255) 26.8 % (1540) 60.5 % 24 aa 5654 aa
Pseudomonas mendocina ymp (pmen0) Bacteria 4594 59.8 % (2748) 75.0 % (3446) 27.2 % (1249) 64.7 % 23 aa 5328 aa
Pseudomonas putida KT2440 (pput0) Bacteria 5350 57.8 % (3091) 73.9 % (3954) 25.3 % (1356) 61.5 % 23 aa 8682 aa
Pseudomonas putida GB-1 (pput1) Bacteria 5409 57.5 % (3109) 74.0 % (4000) 26.8 % (1452) 27 aa 6753 aa
Pseudomonas putida F1 (pput2) Bacteria 5252 59.0 % (3101) 73.8 % (3878) 26.3 % (1379) 9 aa 9030 aa
Pseudomonas stutzeri A1501 (pstu0) Bacteria 4128 58.9 % (2430) 74.4 % (3073) 27.1 % (1120) 63.9 % 31 aa 2444 aa
Pseudomonas syringae pv. tomato str. DC3000 (psyr0) Bacteria 5617 54.2 % (3045) 71.7 % (4025) 23.9 % (1340) 58.3 % 24 aa 6274 aa
Pseudomonas syringae pv. phaseolicola 1448A (psyr1) Bacteria 5171 57.8 % (2990) 73.4 % (3795) 24.1 % (1244) 57.9 % 24 aa 5107 aa
Pseudomonas syringae pv. syringae B728a (psyr2) Bacteria 5089 59.4 % (3021) 74.9 % (3813) 25.3 % (1286) 59.2 % 24 aa 13537 aa
Francisella philomiragia subsp. philomiragia ATCC 25017 (fphi0) Bacteria 1915 58.4 % (1118) 75.4 % (1444) 30.4 % (582) 27 aa 2473 aa
Francisella tularensis subsp. tularensis SCHU S4 (ftul0) Bacteria 1603 58.1 % (931) 71.7 % (1149) 29.8 % (478) 32.3 % 32 aa 1422 aa
Francisella tularensis subsp. holarctica LVS (ftul1) Bacteria 1754 57.5 % (1008) 71.0 % (1245) 29.4 % (515) 32.2 % 36 aa 1444 aa
Francisella tularensis subsp. tularensis FSC 198 (ftul2) Bacteria 1605 58.0 % (931) 71.6 % (1149) 29.9 % (480) 32.3 % 32 aa 1422 aa
Francisella tularensis subsp. holarctica OSU18 (ftul3) Bacteria 1555 59.7 % (928) 71.8 % (1116) 30.0 % (467) 32.2 % 29 aa 1444 aa
Francisella tularensis subsp. novicida U112 (ftul4) Bacteria 1719 61.5 % (1058) 74.4 % (1279) 31.7 % (545) 32.5 % 37 aa 1852 aa
Francisella tularensis subsp. tularensis WY96-3418 (ftul5) Bacteria 1634 58.2 % (951) 73.0 % (1193) 29.1 % (476) 32.3 % 37 aa 1417 aa
Francisella tularensis subsp. holarctica FTA (ftul6) Bacteria 1580 57.8 % (913) 72.3 % (1142) 28.5 % (450) 39 aa 1444 aa
Thiomicrospira crunogena XCL-2 (tcru0) Bacteria 2196 64.8 % (1422) 77.6 % (1704) 25.8 % (567) 43.1 % 37 aa 1597 aa
Photobacterium profundum (ppro0) Bacteria 5480 54.3 % (2973) 71.8 % (3935) 26.9 % (1475) 41.7 % 35 aa 4684 aa
Vibrio cholerae O1 biovar eltor str. N16961 (vcho0) Bacteria 3828 56.3 % (2154) 69.6 % (2664) 27.4 % (1049) 47.5 % 26 aa 4558 aa
Vibrio cholerae O395 (vcho1) Bacteria 3875 54.3 % (2104) 70.3 % (2725) 26.6 % (1029) 47.5 % 29 aa 3263 aa
Vibrio fischeri ES114 (vfis0) Bacteria 3802 60.7 % (2306) 75.4 % (2866) 28.2 % (1071) 38.4 % 21 aa 3971 aa
Vibrio harveyi ATCC BAA-1116 (vhar0) Bacteria 6064 45.9 % (2782) 64.9 % (3934) 23.7 % (1436) 24 aa 6211 aa
Vibrio parahaemolyticus RIMD 2210633 (vpar0) Bacteria 4832 56.1 % (2709) 69.5 % (3359) 27.2 % (1316) 45.4 % 14 aa 6084 aa
Vibrio vulnificus CMCP6 (vvul0) Bacteria 4538 57.7 % (2617) 73.9 % (3353) 25.6 % (1161) 46.7 % 20 aa 5206 aa
Vibrio vulnificus YJ016 (vvul1) Bacteria 5028 53.7 % (2701) 68.2 % (3427) 26.7 % (1341) 46.7 % 34 aa 5206 aa
Xanthomonas axonopodis pv. citri str. 306 (xaxo0) Bacteria 4429 55.5 % (2458) 71.7 % (3175) 24.9 % (1102) 64.7 % 30 aa 4753 aa
Xanthomonas campestris pv. campestris str. ATCC 33913 (xcam0) Bacteria 4181 57.2 % (2393) 73.5 % (3074) 25.3 % (1056) 65.1 % 21 aa 3961 aa
Xanthomonas euvesicatoria (xcam1) Bacteria 4726 52.9 % (2498) 68.8 % (3250) 24.8 % (1172) 64.6 % 30 aa 3709 aa
Xanthomonas campestris pv. campestris str. 8004 (xcam2) Bacteria 4273 56.1 % (2396) 72.5 % (3096) 25.4 % (1086) 65.0 % 28 aa 3961 aa
Xanthomonas campestris pv. campestris (xcam3) Bacteria 4467 53.4 % (2384) 68.5 % (3060) 25.5 % (1139) 26 aa 3961 aa
Xanthomonas oryzae pv. oryzae KACC10331 (xory0) Bacteria 4538 44.4 % (2017) 64.3 % (2918) 21.2 % (961) 63.7 % 30 aa 2941 aa
Xanthomonas oryzae pv. oryzae MAFF 311018 (xory1) Bacteria 4372 47.7 % (2085) 68.5 % (2996) 23.0 % (1007) 63.7 % 30 aa 2927 aa
Xylella fastidiosa 9a5c (xfas0) Bacteria 2832 43.6 % (1236) 55.6 % (1576) 24.7 % (700) 52.6 % 30 aa 3455 aa
Xylella fastidiosa Temecula1 (xfas1) Bacteria 2036 56.7 % (1155) 70.3 % (1431) 25.6 % (522) 51.8 % 30 aa 3457 aa
Xylella fastidiosa M12 (xfas2) Bacteria 2104 54.5 % (1146) 67.1 % (1411) 26.6 % (560) 30 aa 1814 aa
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) (cmag0) Bacteria 976 75.1 % (733) 83.1 % (811) 23.1 % (225) 34.0 % 37 aa 2819 aa
Candidatus Vesicomyosocius okutanii HA (cves0) Bacteria 937 75.8 % (710) 83.5 % (782) 22.3 % (209) 31.6 % 37 aa 1506 aa
Magnetococcus sp. MC-1 (magn0) Bacteria 3716 50.5 % (1875) 72.2 % (2684) 24.2 % (898) 54.2 % 37 aa 15245 aa
Magnetococcus sp. MC-1 (magn0) Bacteria 3716 50.5 % (1875) 72.2 % (2684) 24.2 % (898) 54.2 % 37 aa 15245 aa
Magnetococcus sp. MC-1 (magn0) Bacteria 3716 50.5 % (1875) 72.2 % (2684) 24.2 % (898) 54.2 % 37 aa 15245 aa
Leptospira borgpetersenii serovar Hardjo-bovis JB197 (lbor0) Bacteria 2880 52.7 % (1518) 72.1 % (2077) 30.0 % (863) 40.2 % 37 aa 2587 aa
Leptospira borgpetersenii serovar Hardjo-bovis L550 (lbor1) Bacteria 2945 53.2 % (1566) 72.4 % (2132) 30.1 % (886) 40.2 % 37 aa 2587 aa
Leptospira interrogans serovar Lai str. 56601 (lint0) Bacteria 4725 37.7 % (1782) 52.6 % (2483) 26.6 % (1255) 35.0 % 30 aa 3141 aa
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 (lint1) Bacteria 3658 48.0 % (1755) 65.3 % (2388) 31.5 % (1152) 35.0 % 37 aa 3140 aa
Borrelia turicatae 91E135 (btur0) Bacteria 818 63.8 % (522) 77.4 % (633) 32.9 % (269) 29.1 % 37 aa 2301 aa
Borrelia afzelii PKo (bafz0) Bacteria 1215 48.1 % (584) 60.2 % (732) 30.0 % (365) 27.8 % 16 aa 2162 aa
Borrelia burgdorferi B31 (bbur0) Bacteria 1639 37.9 % (622) 52.0 % (852) 28.0 % (459) 28.2 % 30 aa 2166 aa
Borrelia garinii PBi (bgar0) Bacteria 932 57.9 % (540) 70.0 % (652) 29.6 % (276) 28.1 % 14 aa 2162 aa
Treponema denticola ATCC 35405 (tden0) Bacteria 2767 47.2 % (1307) 63.5 % (1757) 32.4 % (897) 37.9 % 30 aa 3320 aa
Treponema pallidum subsp. pallidum str. Nichols (tpal0) Bacteria 1031 54.0 % (557) 68.5 % (706) 24.8 % (256) 52.8 % 30 aa 1533 aa
Fervidobacterium nodosum Rt17-B1 (fnod0) Bacteria 1750 64.6 % (1130) 78.4 % (1372) 31.2 % (546) 38 aa 1650 aa
Petrotoga mobilis SJ95 (pmob0) Bacteria 1898 65.1 % (1236) 79.5 % (1508) 26.6 % (505) 32 aa 1911 aa
Thermosipho melanesiensis BI429 (tmel0) Bacteria 1879 61.9 % (1163) 74.8 % (1405) 27.8 % (522) 35 aa 1649 aa
Thermotoga lettingae TMO (tlet0) Bacteria 2040 66.6 % (1359) 81.3 % (1658) 30.8 % (628) 38 aa 1650 aa
Thermotoga maritima MSB8 (tmar0) Bacteria 1846 65.6 % (1211) 78.7 % (1453) 26.5 % (489) 46.2 % 30 aa 1690 aa
Thermotoga petrophila RKU-1 (tpet0) Bacteria 1785 68.2 % (1218) 81.2 % (1449) 26.3 % (469) 46.1 % 35 aa 1690 aa
Cryptosporidium hominis TU502 (chom0) Eukaryota 3934 40.2 % (1580) 60.8 % (2393) 25.4 % (998) - 9 aa 4725 aa
Cryptosporidium parvum Iowa II (cpar0) Eukaryota 3805 45.9 % (1748) 68.3 % (2598) 29.6 % (1127) 30.2 % 49 aa 13413 aa
Plasmodium falciparum 3D7 (pfal0) Eukaryota 5049 43.5 % (2198) 70.1 % (3538) 35.0 % (1768) 21.8 % 13 aa 10589 aa
Plasmodium yoelii yoeliia str. 17XNL (pyoe0) Eukaryota 7861 30.8 % (2418) 57.4 % (4509) 33.2 % (2612) - 1 aa 6636 aa
Monosiga brevicollis (mbre0) Eukaryota 9196 53.8 % (4945) 72.7 % (6689) 30.9 % (2839) - 49 aa 17829 aa
Guillardia theta (gthe0) Eukaryota 632 54.6 % (345) 67.9 % (429) 23.9 % (151) 27.6 % 29 aa 2057 aa
Giardia lamblia ATCC 50803 (gint0) Eukaryota 6480 34.4 % (2229) 48.3 % (3128) 22.2 % (1436) - 33 aa 8161 aa
Leishmania major strain Friedlin (lmaj0) Eukaryota 1340 41.9 % (561) 62.8 % (841) 23.5 % (315) 59.3 % 51 aa 17392 aa
Trypanosoma brucei (tbru0) Eukaryota 8758 36.2 % (3173) 60.3 % (5283) 25.6 % (2244) 45.8 % 30 aa 8214 aa
Mycosphaerella graminicola (mgra0) Eukaryota 11395 41.1 % (4678) 60.0 % (6839) 20.5 % (2337) - 49 aa 4637 aa
Phaeosphaeria nodorum SN15 (snod0) Eukaryota 16597 34.1 % (5664) 51.7 % (8583) 20.2 % (3352) - 16 aa 7290 aa
Aspergillus fumigatus Af293 (afum0) Eukaryota 9630 49.2 % (4742) 69.6 % (6700) 25.0 % (2409) 49.8 % 21 aa 8515 aa
Aspergillus terreus (ater0) Eukaryota 10406 49.2 % (5117) 70.1 % (7290) 24.8 % (2576) - 49 aa 5842 aa
Histoplasma capsulatum (hcap0) Eukaryota 9349 39.2 % (3661) 58.8 % (5498) 16.9 % (1580) - 30 aa 4863 aa
Uncinocarpus reesii (uree0) Eukaryota 7798 45.3 % (3536) 65.4 % (5097) 20.1 % (1565) - 49 aa 5757 aa
Coccidioides immitis RS (cimm0) Eukaryota 10457 36.1 % (3779) 53.4 % (5589) 18.0 % (1880) - 29 aa 7862 aa
Botryotinia fuckeliana B05.10 (bcin0) Eukaryota 16389 29.6 % (4858) 44.6 % (7317) 18.6 % (3052) - 29 aa 6808 aa
Sclerotinia sclerotiorum 1980 (sscl0) Eukaryota 14522 31.0 % (4497) 46.8 % (6796) 18.5 % (2682) - 28 aa 6771 aa
Trichoderma reesei QM9414 (tree0) Eukaryota 9129 48.3 % (4406) 68.1 % (6221) 22.7 % (2068) - 49 aa 20873 aa
Fusarium verticillioides (fgra0) Eukaryota 13321 42.5 % (5655) 62.4 % (8317) 23.7 % (3153) - 29 aa 11197 aa
Fusarium verticillioides (fver0) Eukaryota 14195 43.1 % (6120) 62.9 % (8924) 22.1 % (3142) - 29 aa 7549 aa
Gibberella zeae PH-1 (gzea0) Eukaryota 11640 46.8 % (5453) 68.5 % (7970) 25.6 % (2980) - 11 aa 11999 aa
Nectria haematococca (nhae0) Eukaryota 15707 46.6 % (7319) 68.8 % (10801) 24.7 % (3875) - 49 aa 7649 aa
Fusarium oxysporum (foxy0) Eukaryota 17608 41.4 % (7287) 61.7 % (10862) 21.6 % (3801) - 29 aa 7531 aa
Magnaporthe grisea 70-15 (mgri0) Eukaryota 12841 38.2 % (4905) 57.6 % (7390) 22.4 % (2881) - 29 aa 6487 aa
Chaetomium globosum CBS 148.51 (cglo0) Eukaryota 11124 39.8 % (4423) 60.8 % (6764) 20.6 % (2288) - 3 aa 9223 aa
Neurospora crassa OR74A (ncra0) Eukaryota 9845 40.0 % (3934) 58.8 % (5788) 20.6 % (2029) - 29 aa 10820 aa
Saccharomyces cerevisiae (scer0) Eukaryota 5880 53.4 % (3138) 71.1 % (4178) 21.7 % (1277) 37.2 % 16 aa 4910 aa
Yarrowia lipolytica CLIB122 (ylip0) Eukaryota 6521 47.8 % (3116) 68.4 % (4460) 22.7 % (1480) 49.0 % 15 aa 4696 aa
Candida lusitaniae (clus0) Eukaryota 5941 48.6 % (2890) 66.4 % (3947) 23.4 % (1390) - 28 aa 4176 aa
Debaryomyces hansenii CBS767 (dhan0) Eukaryota 6312 50.4 % (3180) 68.7 % (4335) 22.9 % (1443) 36.3 % 13 aa 4189 aa
Ashbya gossypii ATCC 10895 (agos0) Eukaryota 4726 53.3 % (2518) 73.0 % (3450) 20.1 % (948) 51.9 % 25 aa 4899 aa
Kluyveromyces lactis NRRL Y-1140 (klac0) Eukaryota 5327 50.6 % (2693) 69.6 % (3709) 22.2 % (1180) 38.8 % 40 aa 4915 aa
Saccharomyces kluyveri (sklu0) Eukaryota 2968 56.1 % (1665) 74.0 % (2195) 19.7 % (585) - 1 aa 3160 aa
Lodderomyces elongisporus (lelo0) Eukaryota 5796 49.7 % (2882) 67.7 % (3923) 25.1 % (1455) - 50 aa 3496 aa
Candida guilliermondii (cgui0) Eukaryota 5920 52.2 % (3092) 70.8 % (4193) 24.2 % (1431) - 34 aa 4897 aa
Pichia stipitis CBS 6054 (psti0) Eukaryota 4540 53.9 % (2449) 72.3 % (3283) 23.5 % (1065) 41.1 % 49 aa 4979 aa
Naumovia castellii (ncas0) Eukaryota 4677 56.8 % (2658) 75.1 % (3513) 19.7 % (921) - 1 aa 4933 aa
Saccharomyces bayanus (sbay0) Eukaryota 8762 35.8 % (3134) 49.2 % (4314) 25.9 % (2270) - 1 aa 3266 aa
Saccharomyces kudriavzevii (skud0) Eukaryota 3768 52.8 % (1988) 70.8 % (2669) 20.0 % (753) - 1 aa 2158 aa
Saccharomyces mikatae (smik0) Eukaryota 8110 39.1 % (3173) 52.8 % (4286) 25.0 % (2029) - 1 aa 2672 aa
Saccharomyces paradoxus (spar0) Eukaryota 8008 38.6 % (3092) 52.4 % (4198) 26.2 % (2100) - 1 aa 4092 aa
Candida tropicalis (ctro0) Eukaryota 6258 50.1 % (3135) 68.6 % (4290) 25.7 % (1608) - 50 aa 3808 aa
Candida glabrata CBS 138 (cgla0) Eukaryota 5181 53.9 % (2790) 73.5 % (3807) 21.3 % (1104) 38.8 % 41 aa 4880 aa
Schizosaccharomyces pombe 972h- (spom0) Eukaryota 5289 56.6 % (2996) 73.0 % (3859) 20.9 % (1106) 34.6 % 14 aa 4924 aa
Schizosaccharomyces japonicus (sjap0) Eukaryota 5167 53.1 % (2743) 68.9 % (3562) 18.0 % (928) - 30 aa 4765 aa
Coprinus cinereus (ccin0) Eukaryota 13544 36.3 % (4913) 56.3 % (7622) 20.1 % (2729) - 33 aa 4779 aa
Laccaria bicolor (lbic0) Eukaryota 20614 27.6 % (5689) 47.0 % (9690) 19.2 % (3950) - 49 aa 4776 aa
Cryptococcus neoformans var. neoformans JEC21 (cneo0) Eukaryota 7302 45.3 % (3305) 65.4 % (4775) 21.6 % (1574) 48.6 % 30 aa 4920 aa
Phanerochaete chrysosporium RP-78 (pchr0) Eukaryota 10048 44.5 % (4467) 66.6 % (6689) 21.1 % (2116) - 49 aa 4827 aa
Sporobolomyces roseus (sros0) Eukaryota 5536 50.7 % (2808) 70.2 % (3887) 21.2 % (1175) - 49 aa 4758 aa
Ustilago maydis 521 (umay0) Eukaryota 6522 47.7 % (3113) 68.7 % (4480) 24.2 % (1580) - 20 aa 5431 aa
Batrachochytrium dendrobatidis (bden0) Eukaryota 8818 43.5 % (3840) 62.7 % (5526) 21.1 % (1865) - 29 aa 4754 aa
Mycosphaerella fijiensis (mfij0) Eukaryota 10327 43.6 % (4503) 63.8 % (6592) 20.9 % (2159) 49 aa 6601 aa
Aspergillus nidulans (anid0) Eukaryota 10665 47.1 % (5025) 68.1 % (7262) 23.8 % (2542) - 9 aa 7214 aa
Aspergillus clavatus (acla0) Eukaryota 9120 49.7 % (4530) 68.6 % (6256) 23.5 % (2145) 42 aa 8202 aa
Aspergillus flavus (afla0) Eukaryota 12587 47.0 % (5914) 67.0 % (8430) 24.9 % (3128) 29 aa 7781 aa
Aspergillus niger (anig0) Eukaryota 11200 50.1 % (5608) 69.2 % (7753) 24.3 % (2724) - 49 aa 6284 aa
Aspergillus oryzae (aory0) Eukaryota 12063 47.6 % (5744) 67.4 % (8132) 24.6 % (2973) 100 aa 6885 aa
Trichoderma virens Gv29-8 (tvir0) Eukaryota 11643 48.7 % (5675) 69.5 % (8094) 22.5 % (2617) 49 aa 20891 aa
Candida albicans WO-1 (calb0) Eukaryota 6157 49.4 % (3043) 67.8 % (4172) 24.4 % (1503) - 13 aa 3052 aa
Candida albicans SC5314 (calb1) Eukaryota 5993 50.4 % (3022) 67.6 % (4053) 24.7 % (1480) 13 aa 5037 aa
Candida parapsilosis (cpar1) Eukaryota 5733 52.4 % (3005) 70.6 % (4048) 24.9 % (1428) 43 aa 4128 aa
Postia placenta MAD-698 (ppla0) Eukaryota 17173 43.2 % (7411) 64.3 % (11036) 23.0 % (3944) 49 aa 3912 aa
Phycomyces blakesleeanus (pbla0) Eukaryota 14792 37.4 % (5533) 55.6 % (8224) 21.9 % (3236) - 49 aa 9068 aa
Rhizopus oryzae RA 99-880 (rory0) Eukaryota 17467 38.9 % (6801) 56.9 % (9932) 15.5 % (2704) - 29 aa 5940 aa
Encephalitozoon cuniculi GB-M1 (ecun0) Eukaryota 1996 47.1 % (941) 65.8 % (1313) 20.6 % (412) 47.3 % 52 aa 3436 aa
Naegleria gruberi (ngru0) Eukaryota 15753 47.5 % (7476) 68.4 % (10768) 23.6 % (3719) - 50 aa 6497 aa
Helobdella robusta (hrob0) Eukaryota 23432 42.6 % (9985) 58.7 % (13755) 24.0 % (5624) 49 aa 6265 aa
Capitella sp. 1 (capi0) Eukaryota 32415 46.7 % (15136) 64.1 % (20781) 26.4 % (8564) 49 aa 12635 aa
Daphnia pulex (dpul0) Eukaryota 30940 33.4 % (10337) 48.4 % (14984) 21.6 % (6683) 19 aa 7776 aa
Drosophila melanogaster (dmel0) Eukaryota 21030 55.4 % (11659) 71.3 % (14991) 31.3 % (6575) 42.1 % 25 aa 22971 aa
Anopheles gambiae (agam0) Eukaryota 13133 55.5 % (7287) 69.8 % (9162) 31.3 % (4111) - 23 aa 15844 aa
Aedes aegypti (aaeg0) Eukaryota 16789 55.0 % (9238) 69.7 % (11700) 29.8 % (4995) - 30 aa 11328 aa
Apis mellifera (amel0) Eukaryota 27768 52.5 % (14592) 63.3 % (17586) 28.5 % (7901) - 6 aa 7687 aa
Bombyx mori (bmor0) Eukaryota 21314 36.8 % (7849) 51.0 % (10876) 16.6 % (3542) - 28 aa 4621 aa
Microcebus murinus (mmur0) Eukaryota 16319 62.3 % (10174) 77.1 % (12586) 26.9 % (4392) 5 aa 24002 aa
Branchiostoma floridae (lancelet) (bflo1) Eukaryota 50817 60.8 % (30906) 75.3 % (38275) 27.8 % (14150) - 49 aa 25209 aa
Oryzias latipes (olat0) Eukaryota 24661 65.3 % (16104) 79.0 % (19492) 28.4 % (7003) - 21 aa 26141 aa
Gasterosteus aculeatus (gacu0) Eukaryota 27577 66.5 % (18329) 80.7 % (22259) 27.5 % (7593) - 8 aa 26130 aa
Fugu rubripes (Japanese puffer fish) (trub0) Eukaryota 26721 59.7 % (15957) 74.4 % (19885) 27.2 % (7276) - 46 aa 23275 aa
Tetraodon nigroviridis (tnig0) Eukaryota 28005 52.8 % (14792) 66.6 % (18647) 24.6 % (6888) - 24 aa 10495 aa
Danio rerio (drer0) Eukaryota 31743 69.3 % (22007) 83.4 % (26458) 28.1 % (8928) - 10 aa 22500 aa
Xenopus tropicalis (western clawed frog) (xtro0) Eukaryota 27916 58.7 % (16394) 75.7 % (21139) 28.9 % (8077) - 48 aa 9945 aa
Gallus gallus (ggal0) Eukaryota 22195 61.5 % (13642) 75.0 % (16644) 26.9 % (5973) - 14 aa 8787 aa
Loxodonta africana (lafr0) Eukaryota 15717 60.9 % (9568) 76.3 % (11987) 27.6 % (4332) - 8 aa 23984 aa
Echinops telfairi (etel0) Eukaryota 16562 61.2 % (10137) 76.2 % (12625) 24.9 % (4116) - 8 aa 23766 aa
Oryctolagus cuniculus (ocun0) Eukaryota 15438 61.9 % (9552) 76.3 % (11786) 25.0 % (3860) - 8 aa 23875 aa
Ochotona princeps (opri0) Eukaryota 15843 62.9 % (9973) 78.1 % (12366) 27.0 % (4272) 8 aa 23803 aa
Cavia porcellus (cpor0) Eukaryota 14219 61.4 % (8735) 76.4 % (10861) 26.1 % (3708) - 5 aa 23829 aa
Mus musculus (mmus0) Eukaryota 39667 63.5 % (25169) 63.5 % (25169) 29.9 % (11858) - 9 aa 35213 aa
Rattus norvegicus (rnor0) Eukaryota 32948 65.2 % (21492) 79.6 % (26219) 30.6 % (10094) - 9 aa 8028 aa
Spermophilus tridecemlineatus (stri0) Eukaryota 14830 61.0 % (9052) 75.9 % (11249) 26.1 % (3868) - 10 aa 23866 aa
Macaca mulatta (mmul0) Eukaryota 36384 62.8 % (22838) 77.2 % (28105) 25.9 % (9406) - 8 aa 20568 aa
Homo sapiens (hsap0) Eukaryota 53936 61.6 % (33207) 74.9 % (40419) 27.2 % (14687) - 7 aa 31972 aa
Homo sapiens (hsap1) Eukaryota 145478 51.2 % (74450) 51.2 % (74450) 23.6 % (34388) - 4 aa 33423 aa
Homo sapiens (hsap2) Eukaryota 29331 60.9 % (17868) 74.3 % (21788) 28.6 % (8376) - 3 aa 33423 aa
Homo sapiens (huge0) Eukaryota 2038 65.4 % (1332) 86.2 % (1756) 22.4 % (456) - 73 aa 4658 aa
Pan troglodytes (ptro0) Eukaryota 33136 61.6 % (20408) 75.5 % (25003) 27.1 % (8975) - 0 aa 23949 aa
Otolemur garnettii (ogar0) Eukaryota 15448 61.4 % (9482) 76.3 % (11794) 25.9 % (4006) - 14 aa 23898 aa
Tupaia belangeri (tbel0) Eukaryota 15462 61.9 % (9568) 76.9 % (11889) 26.0 % (4018) - 8 aa 23880 aa
Canis familiaris (dog) (cfam0) Eukaryota 33651 70.5 % (23718) 84.3 % (28359) 23.7 % (7964) - 15 aa 14730 aa
Felis catus (fcat0) Eukaryota 14843 61.5 % (9126) 76.9 % (11420) 26.9 % (3995) - 10 aa 20032 aa
Bos taurus (btau0) Eukaryota 27694 63.4 % (17554) 78.0 % (21613) 28.4 % (7871) - 6 aa 23992 aa
Myotis lucifugus (mluc0) Eukaryota 16232 62.8 % (10187) 62.8 % (10187) 25.7 % (4172) - 8 aa 23841 aa
Erinaceus europaeus (eeur0) Eukaryota 14592 61.6 % (8992) 76.8 % (11201) 27.1 % (3955) 13 aa 23326 aa
Sorex araneus (sara0) Eukaryota 13192 61.7 % (8138) 76.7 % (10121) 26.6 % (3514) 13 aa 23455 aa
Dasypus novemcinctus (dnov0) Eukaryota 15539 61.2 % (9512) 75.3 % (11708) 25.5 % (3958) - 12 aa 23947 aa
Monodelphis domestica (mdom0) Eukaryota 32557 71.2 % (23182) 84.4 % (27494) 28.2 % (9176) - 11 aa 16075 aa
Ornithorhynchus anatinus (oana0) Eukaryota 26836 61.1 % (16392) 61.1 % (16392) 27.3 % (7333) - 21 aa 8374 aa
Ciona intestinalisis (sea squirt) (cint0) Eukaryota 14002 60.4 % (8464) 75.8 % (10619) 24.2 % (3388) - 49 aa 21226 aa
Ciona savignyi (csav0) Eukaryota 20143 59.1 % (11900) 72.9 % (14685) 25.5 % (5136) - 22 aa 18399 aa
Nematostella vectensi (sea anemone) (nvec0) Eukaryota 27273 50.3 % (13717) 66.2 % (18062) 23.3 % (6344) - 46 aa 8745 aa
Lottia gigantea (lgig0) Eukaryota 23851 46.2 % (11015) 63.0 % (15034) 25.8 % (6160) 49 aa 10830 aa
Caenorhabditis briggsae (cbri0) Eukaryota 14713 51.4 % (7561) 67.1 % (9871) 36.2 % (5329) - 22 aa 7747 aa
Caenorhabditis elegans (nematode) (cele0) Eukaryota 23662 42.6 % (10083) 59.5 % (14069) 37.7 % (8927) 35.0 % 6 aa 18562 aa
Trichoplax adhaerens Grell-BS-1999 (tadh0) Eukaryota 11520 59.9 % (6905) 76.1 % (8763) 28.0 % (3225) 49 aa 7710 aa
Dictyostelium discoideum (ddis0) Eukaryota 13337 42.2 % (5628) 60.6 % (8078) 27.4 % (3652) 22.9 % 39 aa 11103 aa
Cyanidioschyzon merolae strain 10D (cmer0) Eukaryota 5254 53.4 % (2807) 72.5 % (3808) 23.2 % (1217) - 25 aa 6020 aa
Chlamydomonas reinhardtii (crei0) Eukaryota 15256 39.9 % (6080) 55.4 % (8453) 21.2 % (3228) - 48 aa 8188 aa
Volvox carteri f. nagariensis (vcar0) Eukaryota 15669 36.8 % (5760) 54.8 % (8594) 23.2 % (3642) 49 aa 22244 aa
Ostreococcus lucimarinus (green algae) (oluc0) Eukaryota 7651 50.8 % (3883) 68.8 % (5266) 17.0 % (1304) - 49 aa 4962 aa
Ostreococcus tauri (green algae) (otau0) Eukaryota 7725 47.3 % (3653) 64.7 % (5000) 17.0 % (1312) - 49 aa 7247 aa
Micromonas pusilla CCMP1545 (mpus0) Eukaryota 10575 42.9 % (4534) 59.2 % (6261) 17.1 % (1810) 48 aa 7194 aa
Micromonas pusilla RCC299 (mpus1) Eukaryota 10056 47.5 % (4779) 65.9 % (6630) 19.7 % (1986) 23 aa 14149 aa
Physcomitrella patens subsp. patens (ppat0) Eukaryota 35938 33.3 % (11975) 51.9 % (18647) 17.4 % (6259) 49 aa 4890 aa
Selaginella moellendorffii (smoe0) Eukaryota 22285 47.8 % (10649) 69.8 % (15565) 21.2 % (4724) 49 aa 8462 aa
Oryza sativa (japonica cultivar-group) (osat0) Eukaryota 26887 47.6 % (12810) 64.8 % (17425) 27.9 % (7506) 43.6 % 10 aa 5436 aa
Oryza sativa japonica (cDNA) (osat1) Eukaryota 32071 45.4 % (14568) 61.0 % (19574) 26.4 % (8470) - 1 aa 1921 aa
Populus trichocarpa (black cottonwood) (ptri1) Eukaryota 45555 48.9 % (22290) 66.1 % (30104) 22.3 % (10173) - 49 aa 5317 aa
Arabidopsis thalian (thale cress) (atha0) Eukaryota 30690 52.6 % (16154) 71.9 % (22065) 27.5 % (8453) 36.0 % 19 aa 5336 aa
Phaeodactylum tricornutum (ptri0) Eukaryota 10025 44.7 % (4479) 68.9 % (6909) 26.4 % (2644) - 49 aa 4825 aa
Thalassiosira pseudonana CCMP1335 (tpse0) Eukaryota 11390 44.1 % (5019) 67.2 % (7649) 22.8 % (2595) - 49 aa 8463 aa
Phytophthora infestans (pinf0) Eukaryota 22658 33.4 % (7574) 54.2 % (12273) 19.2 % (4361) - 29 aa 10550 aa
Phytophthora ramorum (pram0) Eukaryota 15743 45.9 % (7231) 67.9 % (10690) 24.4 % (3834) - 34 aa 10810 aa
Phytophthora sojae (psoj0) Eukaryota 19027 42.3 % (8051) 63.6 % (12095) 23.5 % (4470) - 9 aa 10590 aa
Aureococcus anophagefferens (aano0) Eukaryota 11501 55.4 % (6370) 73.0 % (8395) 21.5 % (2467) 49 aa 15048 aa
Pseudomonas aeruginosa phage phi CTX Viruses. (bpct0) Viruses 47 8.5 % (4) 34.0 % (16) 12.8 % (6) 62.6 % 35 aa 904 aa
Bacteriophage phig1e Viruses. (bpg10) Viruses 49 18.4 % (9) 32.7 % (16) 12.2 % (6) 42.7 % 49 aa 1662 aa
PA01 (bppa0) Viruses 34 11.8 % (4) 20.6 % (7) 8.8 % (3) % 23 aa 745 aa
RB69 (bprb0) Viruses 256 24.6 % (63) 40.6 % (104) 9.4 % (24) % 19 aa 1277 aa
Rd (bprd0) Viruses 47 21.3 % (10) 36.2 % (17) 8.5 % (4) % 38 aa 731 aa
S-PM2 (bpsp4) Viruses 241 18.7 % (45) 39.8 % (96) 6.6 % (16) % 25 aa 3779 aa
T3 (bpt30) Viruses 44 18.2 % (8) 36.4 % (16) 15.9 % (7) 49.9 % 25 aa 884 aa
Staphylococcus phage K Viruses. (bpk_0) Viruses 115 30.4 % (35) 51.3 % (59) 10.4 % (12) 99 aa 1351 aa
Bacteriophage A511 (bpa50) Viruses 11 9.1 % (1) 9.1 % (1) 0.0 % (0) 36.7 % 106 aa 562 aa
Bacteriophage Aaphi23 (bpaa0) Viruses 66 16.7 % (11) 34.8 % (23) 19.7 % (13) 42.5 % 27 aa 800 aa
Burkholderia cepacia phage Bcep781 (bpbc0) Viruses 61 11.5 % (7) 26.2 % (16) 4.9 % (3) 63.3 % 38 aa 873 aa
Burkholderia cepacia phage Bcep1 (bpbc1) Viruses 71 9.9 % (7) 21.1 % (15) 9.9 % (7) 636 % 41 aa 824 aa
Burkholderia cepacia phage Bcep43 (bpbc3) Viruses 66 10.6 % (7) 28.8 % (19) 7.6 % (5) 63.4 % 47 aa 824 aa
Burkholderia cenocepacia phage BcepB1A (bpbc5) Viruses 58 10.3 % (6) 31.0 % (18) 13.8 % (8) 54.5 % 53 aa 919 aa
Mycobacteriophage Bxz1 (bpbx1) Viruses 225 8.9 % (20) 24.0 % (54) 8.4 % (19) 64.8 % 31 aa 1370 aa
Bacteriophage EJ-1 (bpej0) Viruses 73 13.7 % (10) 31.5 % (23) 19.2 % (14) 39.6 % 34 aa 748 aa
Halovirus HF2 (bphf0) Viruses 114 9.6 % (11) 21.9 % (25) 6.1 % (7) 55.8 % 29 aa 1288 aa
Haemophilus phage HP1 (bphp0) Viruses 41 19.5 % (8) 36.6 % (15) 12.2 % (5) 40.0 % 61 aa 925 aa
Haemophilus phage HP2 (bphp1) Viruses 36 13.9 % (5) 41.7 % (15) 13.9 % (5) 39.9 % 61 aa 910 aa
Bacteriophage KVP40 (bpkv0) Viruses 381 17.8 % (68) 30.7 % (117) 11.3 % (43) 42.6 % 36 aa 1256 aa
Bacteriophage P4 (bpp40) Viruses 13 15.4 % (2) 46.2 % (6) 7.7 % (1) 49.5 % 88 aa 777 aa
Pseudomonas phage phiKZ (bpph0) Viruses 306 10.5 % (32) 33.7 % (103) 11.8 % (36) 36.8 % 63 aa 2237 aa
Virus PhiCh1 (bpph1) Viruses 98 10.2 % (10) 19.4 % (19) 5.1 % (5) 61.9 % 54 aa 581 aa
Cyanophage P-SSM2 (bpps3) Viruses 329 19.1 % (63) 41.6 % (137) 8.2 % (27) 24 aa 5195 aa
Cyanophage P-SSM4 (bpps4) Viruses 198 16.7 % (33) 34.8 % (69) 13.6 % (27) 35 aa 7312 aa
Vibrio harveyi bacteriophage VHML (bpvh0) Viruses 57 19.3 % (11) 38.6 % (22) 7.0 % (4) 50.6 % 33 aa 1023 aa
Bacteriophage WPhi (bpwp0) Viruses 44 15.9 % (7) 36.4 % (16) 11.4 % (5) 51.7 % 56 aa 815 aa
Burkholderia cenocepacia phage BcepMu (bpbc4) Viruses 53 9.4 % (5) 30.2 % (16) 15.1 % (8) 62.9 % 67 aa 846 aa
Enterobacteria phage Mu (bpmu0) Viruses 53 20.8 % (11) 39.6 % (21) 11.3 % (6) 52.1 % 39 aa 690 aa
Enterobacteria phage P1 (bpp11) Viruses 110 14.5 % (16) 36.4 % (40) 9.1 % (10) 47.3 % 31 aa 2255 aa
Enterobacteria phage 186 (bp180) Viruses 46 23.9 % (11) 45.7 % (21) 13.0 % (6) 53.1 % 58 aa 812 aa
Enterobacteria phage P2 (bpp20) Viruses 42 14.3 % (6) 40.5 % (17) 14.3 % (6) 50.2 % 56 aa 815 aa
Bacteriophage L-413C (bpl40) Viruses 40 10.0 % (4) 35.0 % (14) 17.5 % (7) 52.1 % 56 aa 913 aa
Bacteriophage PSP3 (bpps2) Viruses 42 11.9 % (5) 35.7 % (15) 9.5 % (4) 52.8 % 60 aa 814 aa
Bacteriophage K139 (bpk10) Viruses 44 13.6 % (6) 34.1 % (15) 6.8 % (3) 48.9 % 53 aa 800 aa
Bacteriophage 44RR2.8t (bp441) Viruses 252 24.2 % (61) 39.3 % (99) 6.7 % (17) 43.9 % 32 aa 1420 aa
Bacteriophage Aeh1 (bpae0) Viruses 331 20.2 % (67) 32.3 % (107) 11.2 % (37) 42.8 % 28 aa 1358 aa
Enterobacteria phage RB49 (bprb1) Viruses 272 21.3 % (58) 32.4 % (88) 11.0 % (30) % 32 aa 1246 aa
Bacteriophage RM 378 (bprm0) Viruses 146 14.4 % (21) 41.1 % (60) 9.6 % (14) 42.5 % 27 aa 1019 aa
Enterobacteria phage T4 (bpt40) Viruses 278 25.2 % (70) 36.0 % (100) 10.4 % (29) 35.3 % 26 aa 1289 aa
Acyrthosiphon pisum bacteriophage APSE-1 (bpap0) Viruses 54 13.0 % (7) 29.6 % (16) 18.5 % (10) 43.9 % 73 aa 993 aa
Burkholderia cepacia phage Bcep22 (bpbc2) Viruses 78 12.8 % (10) 43.6 % (34) 9.0 % (7) 65.3 % 32 aa 4602 aa
Bordetella phage BIP-1 (bpbi7) Viruses 48 22.9 % (11) 50.0 % (24) 8.3 % (4) 65.4 % 56 aa 2052 aa
Bordetella phage BMP-1 (bpbm0) Viruses 47 23.4 % (11) 51.1 % (24) 8.5 % (4) 65.4 % 56 aa 2052 aa
Bordetella phage BPP-1 (bpbp0) Viruses 49 22.4 % (11) 49.0 % (24) 10.2 % (5) 65.4 % 56 aa 2052 aa
Salmonella typhimurium bacteriophage ES18 (bpes0) Viruses 79 10.1 % (8) 24.1 % (19) 13.9 % (11) 26 aa 1124 aa
Bacteriophage H-19B (bph10) Viruses 22 22.7 % (5) 40.9 % (9) 13.6 % (3) 45.9 % 44 aa 315 aa
Mycoplasma virus P1 (bpp10) Viruses 11 36.4 % (4) 63.6 % (7) 0.0 % (0) 26.8 % 80 aa 694 aa
Cyanophage P60 (bpp60) Viruses 80 13.8 % (11) 30.0 % (24) 6.2 % (5) 53.2 % 40 aa 680 aa
Pseudomonas aeruginosa bacteriophage PaP2 (bppa2) Viruses 58 8.6 % (5) 25.9 % (15) 13.8 % (8) 45.4 % 48 aa 1849 aa
Cyanophage P-SSP7 (bpps5) Viruses 53 18.9 % (10) 32.1 % (17) 11.3 % (6) 26 aa 1245 aa
Shigella flexneri bacteriophage V (bpsf1) Viruses 53 18.9 % (10) 47.2 % (25) 13.2 % (7) 50.8 % 56 aa 611 aa
Salmonella typhimurium phage ST64B (bpst0) Viruses 56 16.1 % (9) 37.5 % (21) 8.9 % (5) 51.0 % 54 aa 642 aa
Salmonella typhimurium bacteriophage ST64T (bpst1) Viruses 65 20.0 % (13) 33.8 % (22) 10.8 % (7) 47.5 % 37 aa 725 aa
Vibriophage VP5 (bpvp1) Viruses 12 58.3 % (7) 66.7 % (8) 0.0 % (0) 50.5 % 105 aa 782 aa
Vibriophage VP2 (bpvp2) Viruses 14 50.0 % (7) 64.3 % (9) 0.0 % (0) 50.6 % 105 aa 782 aa
Enterobacteria phage epsilon15 (bpep0) Viruses 49 12.2 % (6) 28.6 % (14) 18.4 % (9) 50.8 % 35 aa 1070 aa
Bacteriophage KS7 (bpks0) Viruses 56 16.1 % (9) 33.9 % (19) 7.1 % (4) 20 aa 728 aa
Bacteriophage Mx8 (bpmx0) Viruses 86 9.3 % (8) 25.6 % (22) 11.6 % (10) 32 aa 743 aa
Enterobacteria phage P22 (bpp21) Viruses 36 25.0 % (9) 33.3 % (12) 5.6 % (2) 47.1 % 47 aa 667 aa
Enterobacteria phage Sf6 (bpsf2) Viruses 66 19.7 % (13) 30.3 % (20) 12.1 % (8) 47.5 % 27 aa 708 aa
Enterobacteria phage SP6 (bpsp0) Viruses 20 30.0 % (6) 35.0 % (7) 5.0 % (1) 46.1 % 42 aa 874 aa
Pseudomonas phage gh-1 (bpgh0) Viruses 42 19.0 % (8) 35.7 % (15) 7.1 % (3) 57.4 % 25 aa 1392 aa
Pseudomonas aeruginosa phage PaP3 (bppa1) Viruses 69 8.7 % (6) 18.8 % (13) 11.6 % (8) 52.1 % 26 aa 1056 aa
Bacteriophage phiYeO3-12 (bpph2) Viruses 59 25.4 % (15) 39.0 % (23) 15.3 % (9) 50.6 % 25 aa 1320 aa
Yersinia pestis phage phiA1122 (bpphD) Viruses 50 18.0 % (9) 36.0 % (18) 10.0 % (5) 48.3 % 27 aa 1318 aa
bacteriophage phiKMV (bpphF) Viruses 48 18.8 % (9) 39.6 % (19) 12.5 % (6) 62.3 % 64 aa 1337 aa
Roseophage SIO1 (bpsi0) Viruses 34 0.0 % (0) 0.0 % (0) 11.8 % (4) 46.2 % 77 aa 1484 aa
Enterobacteria phage T7 (bpt70) Viruses 58 19.0 % (11) 32.8 % (19) 12.1 % (7) 48.4 % 29 aa 1318 aa
Vibriophage VpV262 (bpvp0) Viruses 67 4.5 % (3) 23.9 % (16) 9.0 % (6) 49.5 % 46 aa 1536 aa
Staphylococcus phage 44AHJD (bp440) Viruses 21 28.6 % (6) 38.1 % (8) 9.5 % (2) 29.6 % 55 aa 755 aa
Bacteriophage B103 (bpb11) Viruses 17 64.7 % (11) 64.7 % (11) 5.9 % (1) 37.7 % 100 aa 860 aa
Streptococcus phage C1 (bpc10) Viruses 20 15.0 % (3) 45.0 % (9) 5.0 % (1) 34.6 % 51 aa 784 aa
Streptococcus phage Cp-1 (bpcp0) Viruses 28 14.3 % (4) 25.0 % (7) 14.3 % (4) 38.9 % 62 aa 586 aa
Bacillus phage GA-1 (bpga0) Viruses 35 34.3 % (12) 45.7 % (16) 22.9 % (8) 34.7 % 25 aa 740 aa
Staphylococcus aureus phage phiP68 (bpphE) Viruses 22 31.8 % (7) 40.9 % (9) 9.1 % (2) 29.3 % 55 aa 755 aa
Bacillus phage PZA (bppz0) Viruses 27 33.3 % (9) 40.7 % (11) 11.1 % (3) 39.7 % 37 aa 854 aa
Bacteriophage 77 (bp770) Viruses 69 15.9 % (11) 30.4 % (21) 10.1 % (7) 33.5 % 33 aa 1509 aa
Bacteriophage A118 (bpa10) Viruses 72 13.9 % (10) 31.9 % (23) 13.9 % (10) 36.1 % 21 aa 1794 aa
Bacteriophage B1 (bpb10) Viruses 11 0.0 % (0) 9.1 % (1) 0.0 % (0) 36.8 % 65 aa 273 aa
Mycobacteriophage Barnyard (bpba0) Viruses 109 5.5 % (6) 11.0 % (12) 9.2 % (10) 57.3 % 44 aa 2047 aa
Bacteriophage bIL170 (bpbi0) Viruses 64 18.8 % (12) 25.0 % (16) 10.9 % (7) 34.3 % 33 aa 916 aa
Bacteriophage bIL285 (bpbi1) Viruses 62 12.9 % (8) 27.4 % (17) 9.7 % (6) 35.2 % 42 aa 894 aa
Bacteriophage bIL286 (bpbi2) Viruses 61 16.4 % (10) 29.5 % (18) 13.1 % (8) 35.3 % 32 aa 1640 aa
Bacteriophage bIL309 (bpbi3) Viruses 56 8.9 % (5) 32.1 % (18) 14.3 % (8) 35.7 % 40 aa 1441 aa
Bacteriophage bIL310 (bpbi4) Viruses 29 13.8 % (4) 27.6 % (8) 10.3 % (3) 35.9 % 28 aa 542 aa
Bacteriophage bIL311 (bpbi5) Viruses 22 18.2 % (4) 27.3 % (6) 9.1 % (2) 34.2 % 38 aa 489 aa
Bacteriophage bIL312 (bpbi6) Viruses 27 7.4 % (2) 25.9 % (7) 11.1 % (3) 33.0 % 46 aa 480 aa
Lactococcus phage BK5-T (bpbk0) Viruses 63 14.3 % (9) 28.6 % (18) 15.9 % (10) 35.0 % 42 aa 1904 aa
Mycobacteriophage Bxb1 (bpbx0) Viruses 86 14.0 % (12) 27.9 % (24) 12.8 % (11) 63.6 % 31 aa 823 aa
Mycobacteriophage Bxz2 (bpbx2) Viruses 86 12.8 % (11) 29.1 % (25) 14.0 % (12) 64.2 % 20 aa 1008 aa
Mycobacteriophage Che8 (bpch0) Viruses 112 6.2 % (7) 24.1 % (27) 8.9 % (10) 61.3 % 31 aa 1188 aa
Mycobacteriophage Che9c (bpch1) Viruses 84 4.8 % (4) 29.8 % (25) 16.7 % (14) 65.4 % 44 aa 1213 aa
Mycobacteriophage Che9d (bpch2) Viruses 111 6.3 % (7) 21.6 % (24) 7.2 % (8) 61.0 % 34 aa 1183 aa
Mycobacteriophage CJW1 (bpcj0) Viruses 141 11.3 % (16) 21.3 % (30) 7.1 % (10) 63.1 % 32 aa 1576 aa
Mycobacteriophage Corndog (bpco0) Viruses 122 5.7 % (7) 19.7 % (24) 13.1 % (16) 65.4 % 33 aa 1461 aa
Mycobacteriophage D29 (bpd20) Viruses 79 16.5 % (13) 35.4 % (28) 10.1 % (8) 63.5 % 28 aa 837 aa
Bacteriophage HK620 (bphk1) Viruses 58 19.0 % (11) 29.3 % (17) 8.6 % (5) 46.7 % 27 aa 722 aa
Listeria phage 2389 (bpl20) Viruses 57 14.0 % (8) 35.1 % (20) 12.3 % (7) 34.7 % 48 aa 1026 aa
Lactobacillus casei bacteriophage A2 (bplc0) Viruses 61 11.5 % (7) 37.7 % (23) 8.2 % (5) 44.9 % 59 aa 1621 aa
Lactobacillus johnsonii prophage Lj928 (bplj0) Viruses 50 12.0 % (6) 32.0 % (16) 12.0 % (6) 34.7 % 48 aa 1544 aa
Lactobacillus johnsonii prophage Lj965 (bplj1) Viruses 46 19.6 % (9) 43.5 % (20) 13.0 % (6) 35.1 % 49 aa 2021 aa
Mycobacteriophage Omega (bpom0) Viruses 237 10.1 % (24) 18.6 % (44) 9.3 % (22) 61.4 % 22 aa 1599 aa
Lactococcus phage P335 (bpp30) Viruses 49 16.3 % (8) 34.7 % (17) 10.2 % (5) 35.4 % 54 aa 1711 aa
Mycobacteriophage PG1 (bppg0) Viruses 100 11.0 % (11) 20.0 % (20) 10.0 % (10) 66.5 % 45 aa 1932 aa
Bacteriophage phi3626 (bpph5) Viruses 50 20.0 % (10) 42.0 % (21) 14.0 % (7) 28.4 % 39 aa 983 aa
Bacteriophage phi ETA (bpph7) Viruses 66 19.7 % (13) 36.4 % (24) 13.6 % (9) 35.4 % 48 aa 989 aa
Temperate phage PhiNIH1.1 (bpph8) Viruses 55 20.0 % (11) 40.0 % (22) 12.7 % (7) 38.6 % 49 aa 1086 aa
Staphylococcus aureus prophage phiPV83 (bpph9) Viruses 65 18.5 % (12) 40.0 % (26) 13.8 % (9) 33.5 % 46 aa 1313 aa
Staphylococcus aureus temperate phage phiSLT (bpphA) Viruses 62 27.4 % (17) 40.3 % (25) 14.5 % (9) 33.3 % 35 aa 1374 aa
Lactobacillus bacteriophage phi adh (bpphB) Viruses 63 15.9 % (10) 27.0 % (17) 12.7 % (8) 35.6 % 49 aa 1487 aa
Staphylococcus aureus phage phi 11 (bpphH) Viruses 53 20.8 % (11) 37.7 % (20) 9.4 % (5) 34.5 % 57 aa 910 aa
Staphylococcus aureus phage phi 12 (bpphI) Viruses 49 30.6 % (15) 49.0 % (24) 4.1 % (2) 33.3 % 54 aa 2066 aa
Staphylococcus aureus phage phi 13 (bpphJ) Viruses 49 20.4 % (10) 40.8 % (20) 18.4 % (9) 33.5 % 52 aa 1550 aa
Bacteriophage phi JL001 (bppj0) Viruses 90 12.2 % (11) 33.3 % (30) 11.1 % (10) 29 aa 1152 aa
Bacteriophage phiKO2 (bppk0) Viruses 64 18.8 % (12) 43.8 % (28) 9.4 % (6) 51.5 % 33 aa 3433 aa
Bacteriophage phi LC3 (bppl0) Viruses 51 15.7 % (8) 39.2 % (20) 9.8 % (5) 35.5 % 52 aa 843 aa
Methanobacterium phage psiM2 (bpps0) Viruses 31 3.2 % (1) 16.1 % (5) 6.5 % (2) 46.3 % 90 aa 1186 aa
Methanothermobacter wolfeii prophage psiM100 (bpps1) Viruses 37 10.8 % (4) 32.4 % (12) 10.8 % (4) 45.7 % 85 aa 1157 aa
Bacteriophage PY54 (bppy0) Viruses 67 13.4 % (9) 29.9 % (20) 9.0 % (6) 44.6 % 54 aa 1330 aa
Bacteriophage r1t (bpr10) Viruses 50 18.0 % (9) 38.0 % (19) 14.0 % (7) 35.5 % 54 aa 667 aa
Mycobacteriophage Rosebush (bpro0) Viruses 90 12.2 % (11) 27.8 % (25) 12.2 % (11) 69.0 % 37 aa 1882 aa
Staphylococcus aureus bacteriophage PVL (bpsa0) Viruses 62 24.2 % (15) 43.5 % (27) 17.7 % (11) 33.6 % 43 aa 759 aa
Streptococcus thermophilus bacteriophage Sfi11 (bpsf0) Viruses 25 16.0 % (4) 32.0 % (8) 12.0 % (3) 38.6 % 53 aa 1510 aa
Bacteriophage sk1 (bpsk0) Viruses 54 9.3 % (5) 18.5 % (10) 11.1 % (6) 34.5 % 39 aa 999 aa
Streptococcus mitis phage SM1 (bpsm0) Viruses 56 12.5 % (7) 32.1 % (18) 8.9 % (5) 42 aa 1062 aa
Bacteriophage SPBc2 (bpsp1) Viruses 185 19.5 % (36) 36.2 % (67) 15.1 % (28) 34.6 % 21 aa 2285 aa
Streptococcus pneumoniae bacteriophage MM1 (bpsp3) Viruses 53 18.9 % (10) 34.0 % (18) 11.3 % (6) 38.4 % 57 aa 1989 aa
Streptococcus thermophilus bacteriophage 7201 (bpst2) Viruses 46 26.1 % (12) 43.5 % (20) 10.9 % (5) 38.7 % 47 aa 1554 aa
Streptococcus thermophilus bacteriophage DT1 (bpst3) Viruses 47 14.9 % (7) 31.9 % (15) 4.3 % (2) 39.1 % 36 aa 1278 aa
Streptococcus thermophilus temperate bacteriophage O1205 (bpst4) Viruses 57 8.8 % (5) 31.6 % (18) 8.8 % (5) 38.3 % 42 aa 1517 aa
Streptococcus thermophilus bacteriophage Sfi19 (bpst5) Viruses 45 8.9 % (4) 33.3 % (15) 8.9 % (4) 38.3 % 40 aa 1626 aa
Streptococcus thermophilus bacteriophage Sfi21 (bpst6) Viruses 50 14.0 % (7) 32.0 % (16) 12.0 % (6) 37.6 % 48 aa 1560 aa
Mycobacteriophage TM4 (bptm0) Viruses 89 5.6 % (5) 20.2 % (18) 12.4 % (11) 68.1 % 29 aa 1229 aa
Lactococcus lactis bacteriophage TP901-1 (bptp0) Viruses 56 21.4 % (12) 37.5 % (21) 7.1 % (4) 35.4 % 47 aa 937 aa
Bacteriophage Tuc2009 (bptu0) Viruses 56 25.0 % (14) 37.5 % (21) 8.9 % (5) 36.2 % 32 aa 1025 aa
Lactococcus lactis bacteriophage ul36 (bpul0) Viruses 58 13.8 % (8) 31.0 % (18) 13.8 % (8) 35.8 % 50 aa 908 aa
Bacteriophage VT2-Sa (bpvt0) Viruses 82 15.9 % (13) 30.5 % (25) 13.4 % (11) 49.9 % 42 aa 2806 aa
Mycobacterium phage L5 (bpl50) Viruses 85 17.6 % (15) 35.3 % (30) 7.1 % (6) 62.3 % 37 aa 837 aa
Phage phi 4795 (bp470) Viruses 48 22.9 % (11) 35.4 % (17) 14.6 % (7) 50.6 % 25 aa 645 aa
Bacteriophage 933W (bp930) Viruses 80 20.0 % (16) 37.5 % (30) 12.5 % (10) 49.4 % 51 aa 2806 aa
Pseudomonas phage D3 (bpd30) Viruses 94 11.7 % (11) 26.6 % (25) 12.8 % (12) 57.8 % 32 aa 909 aa
Bacteriophage D3112 (bpd31) Viruses 55 10.9 % (6) 29.1 % (16) 10.9 % (6) 64.3 % 34 aa 735 aa
Enterobacteria phage HK022 (bphk0) Viruses 57 19.3 % (11) 38.6 % (22) 10.5 % (6) 49.5 % 50 aa 1183 aa
Bacteriophage HK97 (bphk2) Viruses 61 21.3 % (13) 37.7 % (23) 11.5 % (7) 49.8 % 32 aa 1296 aa
bacteriophage lambda (bpla0) Viruses 66 31.8 % (21) 57.6 % (38) 10.6 % (7) 49.9 % 28 aa 1132 aa
Bacteriophage N15 (bpn10) Viruses 60 21.7 % (13) 41.7 % (25) 6.7 % (4) 51.2 % 18 aa 1324 aa
Bacteriophage P27 (bpp22) Viruses 58 22.4 % (13) 41.4 % (24) 12.1 % (7) 49.4 % 51 aa 649 aa
Bacteriophage phi-105 (bpph3) Viruses 51 13.7 % (7) 41.2 % (21) 11.8 % (6) 42.7 % 56 aa 1018 aa
Bacteriophage phi-C31 (bpph4) Viruses 55 20.0 % (11) 38.2 % (21) 14.5 % (8) 63.6 % 41 aa 729 aa
Bacteriophage phiE125 (bpph6) Viruses 71 14.1 % (10) 36.6 % (26) 11.3 % (8) 61.2 % 43 aa 1354 aa
Bacteriophage phi-BT1 (bpphC) Viruses 55 20.0 % (11) 34.5 % (19) 16.4 % (9) 62.8 % 46 aa 808 aa
Bacteriophage phi1026b (bpphG) Viruses 83 10.8 % (9) 32.5 % (27) 12.0 % (10) 60.7 % 35 aa 1354 aa
Bacteriophage SPP1 (bpsp2) Viruses 106 11.3 % (12) 25.5 % (27) 23.6 % (25) 43.7 % 51 aa 846 aa
Stx2 converting bacteriophage I (bpst7) Viruses 166 9.0 % (15) 19.3 % (32) 17.5 % (29) 49.4 % 33 aa 2806 aa
Stx1 converting bacteriophage (bpst8) Viruses 167 8.4 % (14) 16.8 % (28) 16.8 % (28) 49.7 % 42 aa 2806 aa
Stx2 converting bacteriophage II (bpst9) Viruses 170 8.2 % (14) 16.5 % (28) 18.2 % (31) 49.9 % 41 aa 2576 aa
Bacteriophage VWB (bpvw0) Viruses 61 8.2 % (5) 18.0 % (11) 9.8 % (6) 71.1 % 51 aa 1440 aa
Enterobacteria phage T1 (bpt10) Viruses 78 14.1 % (11) 29.5 % (23) 12.8 % (10) 45.6 % 36 aa 1172 aa
Enterobacteria phage BF23 (bpbf0) Viruses 8 25.0 % (2) 37.5 % (3) 12.5 % (1) 38.5 % 75 aa 595 aa
Bacteriophage T5 (bpt50) Viruses 162 17.9 % (29) 37.7 % (61) 15.4 % (25) 39.3 % 27 aa 1396 aa
Lactococcus phage c2 (bpc20) Viruses 39 5.1 % (2) 25.6 % (10) 15.4 % (6) 36.3 % 22 aa 706 aa
Burkholderia cepacia complex phage BcepC6B (bpbc6) Viruses 46 26.1 % (12) 45.7 % (21) 13.0 % (6) 65.2 % 49 aa 888 aa
Burkholderia cepacia phage BcepNazgul (bpbc7) Viruses 75 5.3 % (4) 25.3 % (19) 12.0 % (9) 31 aa 1270 aa
Bacteriophage Felix 01 (bpfe0) Viruses 247 10.1 % (25) 20.2 % (50) 17.0 % (42) 37 aa 909 aa
Mycoplasma arthritidis bacteriophage MAV1 (bpma0) Viruses 15 13.3 % (2) 66.7 % (10) 13.3 % (2) 91 aa 766 aa
Sinorhizobium meliloti phage PBC5 (bppb0) Viruses 83 8.4 % (7) 25.3 % (21) 12.0 % (10) 80 aa 2849 aa
Listonella pelagia phage phiHSIC (bpphK) Viruses 47 10.6 % (5) 23.4 % (11) 10.6 % (5) 49 aa 1069 aa
Xanthomonas oryzae bacteriophage Xp10 (bpxp0) Viruses 60 23.3 % (14) 40.0 % (24) 10.0 % (6) 50 aa 1574 aa
Alteromonas phage PM2 (bppm0) Viruses 22 18.2 % (4) 27.3 % (6) 31.8 % (7) 42.2 % 30 aa 634 aa
Acanthamoeba polyphaga mimivirus (bpmi0) Viruses 911 37.9 % (345) 63.3 % (577) 12.7 % (116) 81 aa 2959 aa
Paramecium bursaria Chlorella virus 1 (bprb2) Viruses 689 15.7 % (108) 24.2 % (167) 28.3 % (195) 65 aa 1369 aa
Emiliania huxleyi virus 86 (bpeh0) Viruses 472 17.4 % (82) 32.8 % (155) 38.3 % (181) 20 aa 2873 aa
Ectocarpus siliculosus virus 1 (bpes1) Viruses 231 25.5 % (59) 47.6 % (110) 19.0 % (44) 53 aa 1233 aa
Enterobacteria phage PRD1 (bppr0) Viruses 22 36.4 % (8) 40.9 % (9) 36.4 % (8) 48.1 % 42 aa 591 aa

Ratio of ORFs, whose 3D-structures are predicted

DATE Mar 6 2008 
BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf
ORGANISM Norf BLAST PSI-BLAST Membrane G+C content Seq length
min. max.
Cenarchaeum symbiosum (csym0) Archaea 2017 40.3 % (813) 47.3 % (954) 17.7 % (357) 57.4 % 29 aa 11910 aa
Aeropyrum pernix K1 (aper0) Archaea 1700 47.6 % (809) 68.2 % (1160) 23.8 % (405) 56.3 % 30 aa 1950 aa
Aeropyrum pernix K1 (aper1) Archaea 1841 45.3 % (834) 61.5 % (1132) 24.2 % (446) 35.7 % 50 aa 1933 aa
Staphylothermus marinus F1 (smar0) Archaea 1570 48.2 % (757) 67.4 % (1058) 24.5 % (385) 35.7 % 36 aa 1701 aa
Hyperthermus butylicus DSM 5456 (hbut0) Archaea 1602 47.2 % (756) 68.0 % (1090) 22.1 % (354) 53.7 % 44 aa 1507 aa
Metallosphaera sedula DSM 5348 (msed0) Archaea 2256 50.2 % (1133) 68.4 % (1542) 22.2 % (501) 46.2 % 46 aa 1455 aa
Sulfolobus acidocaldarius DSM 639 (saci0) Archaea 2223 53.7 % (1194) 69.7 % (1549) 22.0 % (489) 36.7 % 32 aa 1452 aa
Sulfolobus solfataricus P2 (ssol0) Archaea 2995 47.2 % (1413) 67.4 % (2018) 23.8 % (713) 35.8 % 40 aa 1426 aa
Sulfolobus tokodaii str. 7 (stok0) Archaea 2826 46.1 % (1303) 63.6 % (1797) 25.7 % (726) 32.8 % 50 aa 1442 aa
Thermofilum pendens Hrk 5 (tpen0) Archaea 1876 45.7 % (857) 65.7 % (1233) 25.3 % (474) 57.6 % 31 aa 1711 aa
Pyrobaculum aerophilum str. IM2 (paer1) Archaea 2605 42.1 % (1096) 59.3 % (1544) 25.9 % (674) 51.4 % 18 aa 2785 aa
Pyrobaculum arsenaticum DSM 13514 (pars0) Archaea 2298 43.6 % (1003) 62.1 % (1426) 25.0 % (574) 55.1 % 42 aa 2667 aa
Pyrobaculum calidifontis JCM 11548 (pcal0) Archaea 2149 46.1 % (990) 64.1 % (1378) 26.0 % (559) 57.2 % 42 aa 5058 aa
Pyrobaculum islandicum DSM 4184 (pisl0) Archaea 1978 46.2 % (914) 65.0 % (1286) 23.6 % (467) 49.6 % 35 aa 2656 aa
Archaeoglobus fulgidus DSM 4304 (aful0) Archaea 2407 56.5 % (1360) 72.3 % (1740) 23.7 % (571) 48.6 % 25 aa 2425 aa
Haloarcula marismortui ATCC 43049 (hmar0) Archaea 4240 44.6 % (1890) 61.4 % (2603) 24.2 % (1028) 61.1 % 30 aa 2306 aa
Halobacterium sp. NRC-1 (halo0) Archaea 2605 45.7 % (1191) 62.2 % (1620) 22.0 % (573) 65.9 % 30 aa 1370 aa
Haloquadratum walsbyi DSM 16790 (hwal0) Archaea 2646 46.8 % (1238) 63.4 % (1677) 21.2 % (561) 47.9 % 17 aa 9159 aa
Natronomonas pharaonis DSM 2160 (npha0) Archaea 2822 48.8 % (1376) 64.6 % (1822) 23.0 % (649) 63.1 % 29 aa 1999 aa
Methanosphaera stadtmanae DSM 3091 (msta0) Archaea 1534 58.8 % (902) 72.9 % (1118) 21.6 % (332) 27.6 % 37 aa 3356 aa
Methanothermobacter thermautotrophicus str. Delta H (mthe0) Archaea 1869 55.1 % (1029) 71.6 % (1338) 23.0 % (430) 49.5 % 35 aa 1787 aa
Methanocaldococcus jannaschii DSM 2661 (mjan0) Archaea 1770 55.7 % (986) 73.0 % (1292) 20.7 % (366) 31.3 % 22 aa 2894 aa
Methanococcus maripaludis S2 (mmar0) Archaea 1722 59.7 % (1028) 75.1 % (1294) 23.4 % (403) 33.1 % 32 aa 2076 aa
Methanococcus maripaludis C5 (mmar1) Archaea 1822 54.0 % (983) 71.6 % (1305) 21.7 % (396) 33.0 % 32 aa 2110 aa
Methanocorpusculum labreanum Z (mlab0) Archaea 1739 53.7 % (934) 71.9 % (1251) 24.3 % (422) 50.0 % 47 aa 2772 aa
Methanoculleus marisnigri JR1 (mmar2) Archaea 2489 50.9 % (1268) 69.1 % (1720) 26.0 % (646) 62.1 % 33 aa 1625 aa
Methanospirillum hungatei JF-1 (mhun0) Archaea 3139 52.7 % (1655) 72.9 % (2289) 26.7 % (837) 45.1 % 41 aa 2353 aa
Methanosaeta thermophila PT (mthe2) Archaea 1696 55.9 % (948) 74.6 % (1266) 22.5 % (382) 53.5 % 41 aa 2713 aa
Methanococcoides burtonii DSM 6242 (mbur0) Archaea 2273 55.8 % (1268) 72.4 % (1645) 26.4 % (600) 40.8 % 45 aa 2552 aa
Methanosarcina acetivorans C2A (mace0) Archaea 4544 46.7 % (2124) 67.5 % (3069) 27.7 % (1260) 42.7 % 41 aa 4226 aa
Methanosarcina barkeri str. fusaro (mbar0) Archaea 3625 51.9 % (1881) 69.8 % (2529) 28.8 % (1043) 39.2 % 31 aa 2272 aa
Methanosarcina mazei Goe1 (mmaz0) Archaea 3371 50.0 % (1685) 69.3 % (2335) 24.1 % (812) 41.5 % 16 aa 1898 aa
Methanopyrus kandleri AV19 (mkan0) Archaea 1687 50.1 % (846) 69.5 % (1173) 20.2 % (340) 61.2 % 39 aa 2042 aa
Pyrococcus abyssi Orsay (paby0) Archaea 1784 59.9 % (1069) 76.2 % (1359) 24.7 % (441) 44.7 % 18 aa 2122 aa
Pyrococcus furiosus DSM 3638 (pfur0) Archaea 2065 55.9 % (1155) 68.4 % (1413) 24.8 % (513) 40.8 % 21 aa 1740 aa
Pyrococcus horikoshii OT3 (phor0) Archaea 2061 47.4 % (976) 60.9 % (1256) 28.0 % (578) 41.9 % 50 aa 4436 aa
Thermococcus kodakarensis KOD1 (tkod0) Archaea 2306 51.5 % (1187) 67.6 % (1559) 27.0 % (622) 52.0 % 33 aa 1798 aa
Picrophilus torridus DSM 9790 (ptor0) Archaea 1535 59.0 % (905) 73.5 % (1128) 24.0 % (368) 36.0 % 24 aa 1667 aa
Thermoplasma acidophilum DSM1728 (taci0) Archaea 1478 59.7 % (882) 73.8 % (1091) 23.0 % (340) 46.0 % 45 aa 2081 aa
Thermoplasma volcanium GSS1 (tvol0) Archaea 1526 58.9 % (899) 72.7 % (1109) 22.3 % (340) 39.9 % 50 aa 2076 aa
Nanoarchaeum equitans Kin4-M (nequ0) Archaea 536 53.0 % (284) 70.1 % (376) 25.7 % (138) 31.6 % 54 aa 2197 aa
Acidobacteria bacterium Ellin345 (abac0) Bacteria 4777 52.0 % (2484) 72.1 % (3442) 32.9 % (1571) 58.4 % 41 aa 3121 aa
Solibacter usitatus Ellin6076 (susi0) Bacteria 7826 45.8 % (3586) 72.2 % (5653) 27.7 % (2169) 61.9 % 37 aa 4666 aa
Corynebacterium diphtheriae NCTC 13129 (cdip0) Bacteria 2272 54.1 % (1229) 67.4 % (1531) 26.2 % (596) 53.5 % 31 aa 2977 aa
Corynebacterium efficiens YS-314 (ceff0) Bacteria 2998 51.3 % (1538) 67.5 % (2023) 25.2 % (754) 63.0 % 33 aa 3022 aa
Corynebacterium glutamicum ATCC 13032 (cglu0) Bacteria 3099 51.8 % (1604) 66.2 % (2052) 25.6 % (793) 53.8 % 33 aa 2993 aa
Corynebacterium glutamicum ATCC 13032 (cglu1) Bacteria 3057 51.3 % (1569) 67.0 % (2047) 26.3 % (803) 53.8 % 22 aa 2996 aa
Corynebacterium jeikeium K411 (cjei0) Bacteria 2120 55.6 % (1179) 72.2 % (1530) 25.0 % (531) 61.4 % 24 aa 3618 aa
Mycobacterium gilvum PYR-GCK (mgil0) Bacteria 5579 52.6 % (2932) 72.5 % (4045) 23.6 % (1319) 67.7 % 32 aa 3679 aa
Mycobacterium leprae TN (mlep0) Bacteria 1605 60.6 % (972) 71.9 % (1154) 25.9 % (415) 57.8 % 33 aa 3076 aa
Mycobacterium smegmatis str. MC2 155 (msme0) Bacteria 6716 54.3 % (3648) 72.1 % (4843) 22.4 % (1507) 67.4 % 24 aa 7523 aa
Mycobacterium ulcerans Agy99 (mulc0) Bacteria 4160 50.9 % (2117) 70.1 % (2916) 21.9 % (911) 65.5 % 32 aa 4191 aa
Mycobacterium vanbaalenii PYR-1 (mvan0) Bacteria 5979 53.3 % (3188) 72.3 % (4320) 23.7 % (1418) 67.8 % 32 aa 3696 aa
Mycobacterium sp. MCS (myco0) Bacteria 5615 55.8 % (3131) 73.4 % (4119) 22.1 % (1243) 68.4 % 32 aa 3693 aa
Mycobacterium sp. JLS (myco1) Bacteria 5739 55.2 % (3167) 74.3 % (4265) 22.9 % (1312) 68.4 % 32 aa 3702 aa
Mycobacterium sp. KMS (myco2) Bacteria 5975 52.5 % (3139) 71.6 % (4281) 22.4 % (1341) 68.2 % 32 aa 3693 aa
Mycobacterium avium 104 (maqu1) Bacteria 5120 52.4 % (2681) 71.2 % (3648) 19.8 % (1014) 69.0 % 27 aa 10421 aa
Mycobacterium avium subsp. paratuberculosis K-10 (mavi0) Bacteria 4350 57.5 % (2502) 75.2 % (3270) 21.9 % (952) 69.3 % 37 aa 6384 aa
Mycobacterium bovis AF2122/97 (mbov0) Bacteria 3920 52.9 % (2072) 72.3 % (2835) 22.0 % (861) 65.6 % 26 aa 4151 aa
Mycobacterium bovis BCG str. Pasteur 1173P2 (mbov1) Bacteria 3953 51.3 % (2027) 72.0 % (2845) 21.9 % (867) 65.6 % 10 aa 4151 aa
Mycobacterium tuberculosis H37Rv (mtub0) Bacteria 3991 52.7 % (2103) 72.7 % (2901) 21.9 % (874) 65.6 % 27 aa 4151 aa
Mycobacterium tuberculosis CDC1551 (mtub1) Bacteria 4189 48.8 % (2046) 66.7 % (2796) 21.3 % (892) 65.6 % 30 aa 4151 aa
Nocardia farcinica IFM 10152 (nfar0) Bacteria 5936 49.1 % (2917) 66.5 % (3948) 21.9 % (1302) 70.7 % 34 aa 14474 aa
Rhodococcus sp. RHA1 (rhod0) Bacteria 9145 52.1 % (4760) 67.9 % (6205) 19.8 % (1807) 67.0 % 24 aa 11258 aa
Acidothermus cellulolyticus 11B (acel0) Bacteria 2157 59.3 % (1279) 75.2 % (1622) 24.7 % (532) 66.9 % 32 aa 1785 aa
Frankia alni ACN14a (faln0) Bacteria 6711 46.6 % (3124) 63.5 % (4262) 19.2 % (1290) 72.8 % 20 aa 7085 aa
Frankia sp. CcI3 (fran0) Bacteria 4499 46.0 % (2069) 67.8 % (3050) 21.0 % (944) 70.1 % 32 aa 4606 aa
Tropheryma whipplei TW08/27 (twhi0) Bacteria 783 65.1 % (510) 74.5 % (583) 30.5 % (239) 46.3 % 29 aa 2308 aa
Tropheryma whipplei str. Twist (twhi1) Bacteria 808 63.7 % (515) 72.8 % (588) 32.1 % (259) 46.3 % 39 aa 2312 aa
Leifsonia xyli subsp. xyli str. CTCB07 (lxyl0) Bacteria 2030 53.2 % (1080) 68.5 % (1391) 24.9 % (506) 67.7 % 20 aa 1980 aa
Arthrobacter aurescens TC1 (aaur0) Bacteria 4587 53.4 % (2449) 70.7 % (3245) 25.8 % (1183) 62.4 % 30 aa 2109 aa
Arthrobacter sp. FB24 (arth0) Bacteria 4506 53.7 % (2421) 71.1 % (3206) 26.3 % (1186) 65.4 % 32 aa 3524 aa
Salinispora tropica CNB-440 (stro0) Bacteria 4536 49.4 % (2240) 69.0 % (3129) 22.9 % (1038) 69.5 % 33 aa 7210 aa
Nocardioides sp. JS614 (noca0) Bacteria 4909 52.5 % (2576) 71.4 % (3506) 24.6 % (1206) 71.4 % 33 aa 1980 aa
Propionibacterium acnes KPA171202 (pacn0) Bacteria 2297 56.6 % (1301) 70.9 % (1628) 26.2 % (601) 60.0 % 33 aa 2117 aa
Saccharopolyspora erythraea NRRL 2338 (sery0) Bacteria 7197 49.7 % (3575) 69.4 % (4998) 21.7 % (1562) 71.1 % 30 aa 11792 aa
Streptomyces avermitilis MA-4680 (save0) Bacteria 7673 49.5 % (3798) 68.6 % (5267) 22.9 % (1759) 70.7 % 33 aa 7746 aa
Streptomyces coelicolor A3(2) (scoe0) Bacteria 8154 48.4 % (3946) 68.0 % (5546) 22.6 % (1843) 72.0 % 19 aa 7463 aa
Thermobifida fusca YX (tfus0) Bacteria 3110 54.8 % (1704) 70.6 % (2196) 25.8 % (803) 67.5 % 32 aa 3629 aa
Bifidobacterium adolescentis ATCC 15703 (bado0) Bacteria 1631 57.5 % (938) 73.6 % (1201) 26.2 % (428) 59.2 % 37 aa 3111 aa
Bifidobacterium longum NCC2705 (blon0) Bacteria 1729 59.7 % (1032) 75.0 % (1296) 25.0 % (432) 60.1 % 15 aa 3172 aa
Rubrobacter xylanophilus DSM 9941 (rxyl0) Bacteria 3140 61.5 % (1932) 74.7 % (2345) 24.8 % (779) 70.5 % 44 aa 1618 aa
Symbiobacterium thermophilum IAM14863 (symb0) Bacteria 3337 53.7 % (1791) 70.8 % (2363) 27.9 % (932) 68.7 % 30 aa 2244 aa
Aquifex aeolicus VF5 (aaeo0) Bacteria 1553 67.2 % (1044) 81.1 % (1259) 24.1 % (374) 43.3 % 47 aa 1574 aa
Bacteroides fragilis YCH46 (bfra0) Bacteria 4625 44.0 % (2035) 65.3 % (3019) 31.2 % (1445) 43.2 % 38 aa 1957 aa
Bacteroides fragilis NCTC 9343 (bfra1) Bacteria 4236 46.6 % (1974) 68.9 % (2918) 32.2 % (1365) 43.1 % 30 aa 1957 aa
Bacteroides thetaiotaomicron VPI-5482 (bthe0) Bacteria 4816 47.6 % (2291) 73.5 % (3541) 32.4 % (1561) 42.9 % 32 aa 2183 aa
Porphyromonas gingivalis W83 (pgin0) Bacteria 1909 49.6 % (947) 69.0 % (1318) 27.0 % (516) 48.3 % 30 aa 2316 aa
Flavobacterium johnsoniae UW101 (fjoh0) Bacteria 5017 47.4 % (2379) 70.7 % (3546) 27.2 % (1366) 34.1 % 30 aa 6497 aa
Gramella forsetii KT0803 (gfor0) Bacteria 3584 48.1 % (1725) 67.1 % (2404) 30.2 % (1081) 36.6 % 30 aa 4528 aa
Salinibacter ruber DSM 13855 (srub0) Bacteria 2833 56.6 % (1604) 73.3 % (2076) 27.3 % (772) 66.1 % 30 aa 2597 aa
Cytophaga hutchinsonii ATCC 33406 (chut0) Bacteria 3785 47.8 % (1810) 66.0 % (2497) 33.4 % (1266) 38.8 % 49 aa 5453 aa
Chlamydia muridarum Nigg (cmur0) Bacteria 911 56.1 % (511) 69.7 % (635) 27.1 % (247) 40.3 % 33 aa 3335 aa
Chlamydia trachomatis D/UW-3/CX (ctra0) Bacteria 894 56.7 % (507) 72.1 % (645) 27.2 % (243) 41.3 % 45 aa 1786 aa
Chlamydia trachomatis A/HAR-13 (ctra1) Bacteria 919 55.6 % (511) 70.8 % (651) 27.4 % (252) 41.3 % 45 aa 1786 aa
Chlamydophila abortus S26/3 (cabo0) Bacteria 932 57.1 % (532) 73.3 % (683) 30.7 % (286) 39.9 % 39 aa 1806 aa
Chlamydophila caviae GPIC (ccav0) Bacteria 1005 53.3 % (536) 68.5 % (688) 30.5 % (307) 39.2 % 30 aa 3346 aa
Chlamydophila felis Fe/C-56 (cfel0) Bacteria 1013 53.3 % (540) 70.9 % (718) 28.5 % (289) 39.3 % 40 aa 3298 aa
Chlamydophila pneumoniae AR39 (cpne0) Bacteria 1116 46.9 % (523) 62.5 % (697) 31.4 % (350) 40.6 % 30 aa 1826 aa
Chlamydophila pneumoniae CWL029 (cpne1) Bacteria 1052 49.7 % (523) 66.3 % (697) 32.0 % (337) 40.6 % 40 aa 1826 aa
Chlamydophila pneumoniae J138 (cpne2) Bacteria 1069 49.4 % (528) 66.2 % (708) 31.2 % (333) 40.6 % 40 aa 1826 aa
Chlamydophila pneumoniae TW-183 (cpne3) Bacteria 1113 47.5 % (529) 63.6 % (708) 30.6 % (341) 40.6 % 33 aa 1826 aa
Parachlamydia sp. UWE25 (para0) Bacteria 2031 46.5 % (944) 63.6 % (1292) 25.9 % (526) 34.7 % 45 aa 3181 aa
Chlorobium tepidum TLS (ctep0) Bacteria 2255 53.6 % (1209) 67.1 % (1512) 21.5 % (485) 56.5 % 30 aa 1538 aa
Chlorobium chlorochromatii CaD3 (cchl0) Bacteria 2002 56.2 % (1126) 74.9 % (1499) 18.8 % (376) 44.3 % 31 aa 36805 aa
Chlorobium phaeobacteroides DSM 266 (cpha0) Bacteria 2650 50.6 % (1340) 72.9 % (1932) 21.8 % (578) 48.4 % 38 aa 4876 aa
Pelodictyon luteolum DSM 273 (plut0) Bacteria 2083 60.1 % (1252) 77.1 % (1605) 24.2 % (504) 57.3 % 48 aa 7284 aa
Dehalococcoides sp. CBDB1 (deha0) Bacteria 1458 59.4 % (866) 71.3 % (1040) 23.6 % (344) 47.0 % 27 aa 1434 aa
Dehalococcoides sp. BAV1 (deha1) Bacteria 1371 59.0 % (809) 73.0 % (1001) 22.4 % (307) 47.2 % 31 aa 1823 aa
Dehalococcoides ethenogenes 195 (deth0) Bacteria 1580 57.2 % (904) 69.4 % (1096) 22.8 % (361) 48.9 % 30 aa 1834 aa
Synechococcus sp. JA-3-3Ab (cyel0) Bacteria 2760 51.1 % (1410) 68.7 % (1895) 23.9 % (661) 60.2 % 27 aa 2413 aa
Synechococcus sp. JA-3-3Ab (cyel0) Bacteria 2760 51.1 % (1410) 68.7 % (1895) 23.9 % (661) 60.2 % 27 aa 2413 aa
Synechococcus elongatus PCC 6301 (selo0) Bacteria 2525 56.4 % (1424) 72.3 % (1826) 25.0 % (630) 55.5 % 15 aa 1568 aa
Synechococcus elongatus PCC 7942 (selo1) Bacteria 2728 54.1 % (1477) 69.6 % (1899) 25.2 % (687) 55.4 % 29 aa 1807 aa
Synechococcus sp. WH 8102 (syne1) Bacteria 2517 49.5 % (1246) 65.9 % (1659) 21.6 % (543) 59.4 % 31 aa 10791 aa
Synechococcus sp. CC9902 (syne2) Bacteria 2304 51.6 % (1188) 66.4 % (1530) 23.4 % (538) 54.2 % 25 aa 3504 aa
Synechococcus sp. CC9605 (syne3) Bacteria 2638 46.7 % (1231) 62.1 % (1639) 22.6 % (597) 59.2 % 32 aa 1533 aa
Synechococcus sp. CC9311 (syne4) Bacteria 2892 42.8 % (1239) 58.0 % (1678) 24.9 % (720) 52.4 % 27 aa 2178 aa
Synechococcus sp. WH 7803 (syne5) Bacteria 2533 47.3 % (1198) 63.9 % (1618) 25.9 % (655) 60.2 % 31 aa 2208 aa
Synechocystis sp. PCC 6803 (syne0) Bacteria 3569 50.6 % (1805) 71.1 % (2537) 25.2 % (901) 47.4 % 29 aa 4199 aa
Thermosynechococcus elongatus BP-1 (telo0) Bacteria 2475 54.8 % (1356) 71.8 % (1776) 26.5 % (656) 53.9 % 29 aa 1706 aa
Gloeobacter violaceus PCC 7421 (gvio0) Bacteria 4430 49.8 % (2204) 62.7 % (2776) 24.1 % (1066) 62.0 % 28 aa 3277 aa
Anabaena variabilis ATCC 29413 (anab1) Bacteria 5657 50.5 % (2857) 69.0 % (3903) 25.5 % (1440) 41.4 % 28 aa 6581 aa
Anabaena sp. PCC 7120 (anab0) Bacteria 6132 46.5 % (2851) 65.9 % (4040) 25.6 % (1567) 41.3 % 17 aa 4936 aa
Trichodesmium erythraeum IMS101 (tery0) Bacteria 4451 48.5 % (2160) 68.0 % (3025) 22.9 % (1018) 34.1 % 28 aa 9867 aa
Prochlorococcus marinus subsp. pastoris str. CCMP1986 (pmar0) Bacteria 1712 56.7 % (970) 71.1 % (1217) 25.9 % (444) 30.8 % 32 aa 1521 aa
Prochlorococcus marinus str. MIT 9313 (pmar1) Bacteria 2265 50.5 % (1144) 65.3 % (1478) 24.6 % (558) 50.7 % 33 aa 1765 aa
Prochlorococcus marinus subsp. marinus str. CCMP1375 (pmar2) Bacteria 1882 52.5 % (988) 65.4 % (1231) 25.4 % (478) 36.4 % 30 aa 1524 aa
Prochlorococcus marinus str. NATL2A (pmar3) Bacteria 1890 52.6 % (994) 65.5 % (1238) 26.1 % (494) 35.1 % 30 aa 1821 aa
Prochlorococcus marinus str. MIT 9312 (pmar4) Bacteria 1809 54.3 % (982) 68.0 % (1230) 25.4 % (460) 31.2 % 32 aa 1468 aa
Prochlorococcus marinus str. AS9601 (pmar5) Bacteria 1921 49.1 % (943) 63.4 % (1218) 26.1 % (502) 31.3 % 29 aa 4723 aa
Prochlorococcus marinus str. MIT 9301 (pmar6) Bacteria 1907 49.4 % (942) 63.5 % (1210) 26.0 % (496) 31.3 % 29 aa 1523 aa
Prochlorococcus marinus str. MIT 9303 (pmar7) Bacteria 2997 39.3 % (1179) 53.0 % (1589) 23.1 % (693) 50.0 % 28 aa 2199 aa
Prochlorococcus marinus str. MIT 9515 (pmar8) Bacteria 1906 49.3 % (939) 63.1 % (1202) 26.4 % (504) 30.8 % 25 aa 1524 aa
Prochlorococcus marinus str. NATL1A (pmar9) Bacteria 2193 44.6 % (977) 56.5 % (1239) 27.3 % (599) 35.0 % 30 aa 2178 aa
Deinococcus geothermalis DSM 11300 (dgeo0) Bacteria 2857 58.4 % (1669) 73.8 % (2109) 22.1 % (632) 66.5 % 30 aa 3243 aa
Deinococcus radiodurans R1 (drad0) Bacteria 3101 52.7 % (1634) 69.1 % (2144) 20.1 % (623) 66.6 % 37 aa 1940 aa
Thermus thermophilus HB27 (tthe0) Bacteria 2210 59.0 % (1305) 74.1 % (1638) 23.5 % (519) 69.4 % 27 aa 2672 aa
Thermus thermophilus HB8 (tthe1) Bacteria 2246 59.9 % (1346) 74.0 % (1661) 22.8 % (511) 69.5 % 11 aa 2672 aa
Bacillus clausii KSM-K16 (bcla0) Bacteria 4087 59.8 % (2442) 73.0 % (2982) 27.9 % (1139) 44.8 % 26 aa 2870 aa
Bacillus halodurans C-125 (bhal0) Bacteria 4066 56.7 % (2304) 71.3 % (2898) 28.8 % (1171) 43.7 % 11 aa 1816 aa
Bacillus licheniformis DSM 13 (blic0) Bacteria 4196 57.6 % (2417) 70.5 % (2957) 29.4 % (1234) 46.2 % 24 aa 3588 aa
Bacillus licheniformis ATCC 14580 (blic1) Bacteria 4152 57.3 % (2379) 70.4 % (2922) 29.5 % (1223) 46.2 % 26 aa 3588 aa
Bacillus subtilis subsp. subtilis str. 168 (bsub0) Bacteria 4106 57.2 % (2349) 69.6 % (2859) 29.3 % (1202) 43.5 % 20 aa 5488 aa
Bacillus anthracis str. Ames (bant0) Bacteria 5311 50.0 % (2653) 62.3 % (3307) 31.4 % (1666) 35.4 % 28 aa 5017 aa
Bacillus anthracis str. Ames (bant1) Bacteria 5617 48.1 % (2700) 60.6 % (3406) 31.3 % (1759) 35.2 % 28 aa 5017 aa
Bacillus anthracis str. Sterne (bant2) Bacteria 5513 51.9 % (2860) 65.8 % (3626) 31.8 % (1752) 35.4 % 35 aa 5017 aa
Bacillus cereus ATCC 14579 (bcer0) Bacteria 5255 51.6 % (2709) 65.3 % (3430) 30.2 % (1586) 35.3 % 18 aa 5017 aa
Bacillus cereus ATCC 10987 (bcer1) Bacteria 5844 48.2 % (2819) 61.1 % (3569) 31.3 % (1829) 35.5 % 30 aa 3242 aa
Bacillus cereus E33L (bcer2) Bacteria 5641 52.0 % (2934) 66.0 % (3723) 31.8 % (1796) 35.1 % 44 aa 5017 aa
Bacillus thuringiensis serovar konkukian str. 97-27 (bthu0) Bacteria 5197 53.1 % (2760) 66.4 % (3449) 32.1 % (1667) 35.4 % 48 aa 5017 aa
Bacillus thuringiensis str. Al Hakam (bthu1) Bacteria 4798 54.5 % (2616) 66.9 % (3212) 29.3 % (1408) 35.4 % 46 aa 5010 aa
Geobacillus kaustophilus HTA426 (gkau0) Bacteria 3540 54.1 % (1916) 68.7 % (2432) 25.8 % (912) 52.0 % 23 aa 2301 aa
Oceanobacillus iheyensis HTE831 (oihe0) Bacteria 3496 58.9 % (2060) 66.3 % (2319) 32.2 % (1127) 35.7 % 24 aa 2373 aa
Listeria innocua (linn0) Bacteria 3043 60.4 % (1839) 73.3 % (2230) 26.3 % (801) 37.4 % 37 aa 2167 aa
Listeria monocytogenes Clip11262 (lmon0) Bacteria 2846 64.1 % (1825) 75.7 % (2155) 28.1 % (800) 38.0 % 28 aa 2044 aa
Listeria monocytogenes str. 4b F2365 (lmon1) Bacteria 2821 62.7 % (1768) 70.2 % (1979) 29.1 % (820) 38.0 % 28 aa 2195 aa
Listeria welshimeri serovar 6b str. SLCC5334 (lwel0) Bacteria 2774 59.1 % (1640) 72.2 % (2002) 28.9 % (802) 36.4 % 30 aa 2753 aa
Staphylococcus aureus subsp. aureus Mu50 (saur0) Bacteria 2733 57.8 % (1580) 69.9 % (1911) 27.6 % (754) 32.8 % 16 aa 6713 aa
Staphylococcus aureus subsp. aureus N315 (saur1) Bacteria 2624 60.1 % (1577) 71.7 % (1882) 28.2 % (741) 32.8 % 16 aa 6713 aa
Staphylococcus aureus subsp. aureus MW2 (saur2) Bacteria 2659 58.5 % (1556) 70.0 % (1860) 28.4 % (756) 32.8 % 18 aa 9904 aa
Staphylococcus aureus subsp. aureus MRSA252 (saur3) Bacteria 2656 58.1 % (1543) 69.8 % (1854) 27.7 % (737) 32.8 % 16 aa 10746 aa
Staphylococcus aureus subsp. aureus MSSA476 (saur4) Bacteria 2598 59.0 % (1534) 70.4 % (1828) 28.5 % (741) 32.8 % 16 aa 2391 aa
Staphylococcus aureus subsp. aureus COL (saur5) Bacteria 2676 56.8 % (1520) 67.8 % (1814) 27.0 % (723) 32.8 % 21 aa 10498 aa
Staphylococcus aureus RF122 (saur6) Bacteria 2515 58.6 % (1475) 70.4 % (1770) 28.2 % (710) 32.8 % 34 aa 2396 aa
Staphylococcus aureus subsp. aureus NCTC 8325 (saur7) Bacteria 2892 53.3 % (1541) 60.3 % (1744) 27.0 % (780) 32.9 % 29 aa 9535 aa
Staphylococcus aureus subsp. aureus USA300 (saur8) Bacteria 2604 60.1 % (1566) 72.4 % (1886) 26.6 % (692) 32.7 % 30 aa 10421 aa
Staphylococcus aureus subsp. aureus JH9 (saur9) Bacteria 2697 55.6 % (1500) 69.1 % (1863) 26.8 % (724) 32.9 % 26 aa 10624 aa
Staphylococcus epidermidis ATCC 12228 (sepi0) Bacteria 2485 56.4 % (1401) 68.0 % (1691) 26.8 % (666) 32.0 % 25 aa 9439 aa
Staphylococcus epidermidis RP62A (sepi1) Bacteria 2526 55.7 % (1406) 67.3 % (1700) 25.9 % (655) 32.1 % 19 aa 10203 aa
Staphylococcus haemolyticus JCSC1435 (shae0) Bacteria 2694 54.7 % (1474) 68.2 % (1836) 28.0 % (754) 32.8 % 11 aa 4354 aa
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 (ssap0) Bacteria 2514 60.3 % (1516) 71.9 % (1808) 28.2 % (708) 33.2 % 17 aa 2316 aa
Clostridium acetobutylicum ATCC 824 (cace0) Bacteria 3848 56.6 % (2177) 70.8 % (2724) 28.0 % (1076) 30.9 % 27 aa 2870 aa
Clostridium difficile 630 (cdif0) Bacteria 3753 58.3 % (2188) 71.6 % (2689) 27.3 % (1025) 29.1 % 6 aa 3011 aa
Clostridium novyi NT (cnov0) Bacteria 2325 55.4 % (1288) 72.3 % (1682) 27.1 % (629) 28.9 % 30 aa 2861 aa
Clostridium perfringens str. 13 (cper0) Bacteria 2723 58.6 % (1596) 71.9 % (1958) 30.5 % (831) 28.5 % 37 aa 2104 aa
Clostridium perfringens ATCC 13124 (cper1) Bacteria 2876 56.3 % (1620) 69.9 % (2010) 30.8 % (886) 28.4 % 30 aa 2638 aa
Clostridium perfringens SM101 (cper2) Bacteria 2631 56.1 % (1475) 71.1 % (1870) 28.9 % (761) 28.2 % 30 aa 2095 aa
Clostridium tetani E88 (ctet0) Bacteria 2432 57.7 % (1403) 66.6 % (1620) 30.3 % (738) 28.6 % 71 aa 2838 aa
Clostridium thermocellum ATCC 27405 (cthe0) Bacteria 3191 50.9 % (1623) 73.0 % (2330) 29.2 % (933) 39.0 % 37 aa 6885 aa
Carboxydothermus hydrogenoformans Z-2901 (chyd0) Bacteria 2620 54.4 % (1425) 68.7 % (1799) 24.3 % (637) 42.0 % 28 aa 1407 aa
Desulfitobacterium hafniense Y51 (dhaf0) Bacteria 5060 56.7 % (2869) 74.0 % (3744) 28.1 % (1422) 47.4 % 35 aa 3013 aa
Desulfotomaculum reducens MI-1 (dred0) Bacteria 3276 51.5 % (1688) 71.3 % (2335) 25.5 % (836) 42.3 % 36 aa 2630 aa
Pelotomaculum thermopropionicum SI (pthe0) Bacteria 2920 51.6 % (1508) 72.0 % (2101) 22.2 % (648) 53.0 % 30 aa 2071 aa
Caldicellulosiruptor saccharolyticus DSM 8903 (csac0) Bacteria 2679 53.3 % (1429) 73.6 % (1972) 27.6 % (740) 35.3 % 30 aa 2593 aa
Syntrophomonas wolfei subsp. wolfei str. Goettingen (swol0) Bacteria 2504 53.1 % (1329) 76.1 % (1905) 22.9 % (573) 44.9 % 35 aa 2638 aa
Moorella thermoacetica ATCC 39073 (mthe1) Bacteria 2465 58.3 % (1436) 75.9 % (1872) 24.3 % (600) 55.8 % 37 aa 1487 aa
Thermoanaerobacter tengcongensis MB4 (tten0) Bacteria 2588 58.3 % (1510) 73.6 % (1906) 27.6 % (715) 37.6 % 37 aa 2862 aa
Enterococcus faecalis V583 (efae0) Bacteria 3265 51.6 % (1684) 65.5 % (2139) 27.7 % (906) 37.4 % 22 aa 3173 aa
Lactobacillus acidophilus NCFM (laci0) Bacteria 1862 59.7 % (1112) 74.4 % (1386) 27.5 % (512) 34.7 % 27 aa 4326 aa
Lactobacillus brevis ATCC 367 (lbre0) Bacteria 2218 54.6 % (1212) 69.8 % (1549) 28.2 % (626) 46.1 % 23 aa 1895 aa
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (lbul0) Bacteria 1562 58.5 % (913) 69.5 % (1086) 26.0 % (406) 49.7 % 16 aa 1946 aa
Lactobacillus casei ATCC 334 (lcas0) Bacteria 2771 50.7 % (1404) 59.8 % (1656) 29.7 % (822) 46.6 % 17 aa 2209 aa
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 (ldel0) Bacteria 1721 53.0 % (912) 66.4 % (1143) 25.6 % (441) 49.7 % 15 aa 1813 aa
Lactobacillus gasseri ATCC 33323 (lgas0) Bacteria 1755 55.8 % (980) 70.5 % (1238) 26.0 % (457) 35.3 % 30 aa 3692 aa
Lactobacillus johnsonii NCC 533 (ljoh0) Bacteria 1821 58.3 % (1062) 73.0 % (1330) 29.0 % (529) 34.6 % 38 aa 4734 aa
Lactobacillus plantarum WCFS1 (lpla0) Bacteria 3059 55.9 % (1711) 70.2 % (2147) 27.9 % (854) 44.4 % 24 aa 5289 aa
Lactobacillus sakei subsp. sakei 23K (lsak0) Bacteria 1885 58.6 % (1105) 70.7 % (1332) 28.8 % (542) 41.3 % 7 aa 1987 aa
Lactobacillus salivarius subsp. salivarius UCC118 (lsal0) Bacteria 2017 56.0 % (1129) 69.2 % (1395) 25.4 % (512) 33.0 % 35 aa 1444 aa
Pediococcus pentosaceus ATCC 25745 (ppen0) Bacteria 1755 59.7 % (1047) 72.6 % (1274) 25.9 % (454) 37.4 % 15 aa 3017 aa
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 (lmes0) Bacteria 2005 58.1 % (1165) 71.6 % (1436) 29.0 % (581) 37.7 % 17 aa 2821 aa
Oenococcus oeni PSU-1 (ooen0) Bacteria 1691 59.1 % (1000) 70.5 % (1192) 27.9 % (471) 37.9 % 22 aa 1475 aa
Lactococcus lactis subsp. lactis Il1403 (llac0) Bacteria 2266 58.4 % (1324) 72.0 % (1632) 27.1 % (613) 35.3 % 31 aa 1983 aa
Lactococcus lactis subsp. cremoris SK11 (llac1) Bacteria 2504 52.1 % (1305) 69.2 % (1733) 24.3 % (609) 35.8 % 15 aa 1962 aa
Lactococcus lactis subsp. cremoris MG1363 (llac2) Bacteria 2434 54.2 % (1319) 69.5 % (1692) 25.5 % (621) 35.7 % 25 aa 1715 aa
Streptococcus agalactiae 2603V/R (saga0) Bacteria 2124 56.9 % (1208) 70.5 % (1498) 26.8 % (570) 35.6 % 23 aa 2274 aa
Streptococcus agalactiae NEM316 (saga1) Bacteria 2094 58.4 % (1222) 72.6 % (1520) 28.8 % (603) 35.6 % 30 aa 2066 aa
Streptococcus agalactiae A909 (saga2) Bacteria 1996 58.6 % (1169) 74.3 % (1484) 26.8 % (535) 35.6 % 31 aa 1774 aa
Streptococcus mutans UA159 (smut0) Bacteria 1960 59.0 % (1156) 73.1 % (1432) 27.3 % (535) 36.8 % 25 aa 2724 aa
Streptococcus pneumoniae TIGR4 (spne0) Bacteria 2125 56.4 % (1198) 69.6 % (1478) 25.0 % (532) 39.7 % 27 aa 4776 aa
Streptococcus pneumoniae R6 (spne1) Bacteria 2043 59.1 % (1207) 72.9 % (1489) 25.2 % (515) 39.7 % 20 aa 2551 aa
Streptococcus pneumoniae D39 (spne2) Bacteria 1914 59.0 % (1129) 73.5 % (1407) 26.1 % (500) 39.7 % 37 aa 2551 aa
Streptococcus pyogenes M1 GAS (spyo0) Bacteria 1696 59.1 % (1003) 74.4 % (1262) 24.1 % (408) 38.5 % 27 aa 2045 aa
Streptococcus pyogenes MGAS8232 (spyo1) Bacteria 1845 56.8 % (1048) 72.0 % (1329) 23.2 % (428) 38.5 % 33 aa 1647 aa
Streptococcus pyogenes MGAS315 (spyo2) Bacteria 1865 56.4 % (1051) 71.4 % (1332) 23.0 % (429) 38.6 % 38 aa 1622 aa
Streptococcus pyogenes SSI-1 (spyo3) Bacteria 1861 55.9 % (1040) 70.5 % (1312) 22.9 % (426) 38.6 % 27 aa 1623 aa
Streptococcus pyogenes MGAS10394 (spyo4) Bacteria 1886 55.4 % (1045) 71.4 % (1346) 23.8 % (448) 38.7 % 30 aa 1648 aa
Streptococcus pyogenes MGAS5005 (spyo5) Bacteria 1865 56.2 % (1048) 70.3 % (1311) 24.4 % (455) 38.5 % 33 aa 2059 aa
Streptococcus pyogenes MGAS6180 (spyo6) Bacteria 1894 55.5 % (1052) 70.0 % (1326) 25.4 % (481) 38.4 % 35 aa 2106 aa
Streptococcus pyogenes MGAS10270 (spyo7) Bacteria 1987 53.7 % (1068) 68.4 % (1360) 24.1 % (478) 38.4 % 31 aa 1715 aa
Streptococcus pyogenes MGAS10750 (spyo8) Bacteria 1979 54.6 % (1081) 69.6 % (1377) 23.6 % (467) 38.3 % 30 aa 2547 aa
Streptococcus pyogenes MGAS2096 (spyo9) Bacteria 1898 56.3 % (1068) 71.8 % (1362) 24.4 % (464) 38.7 % 31 aa 2416 aa
Streptococcus pyogenes MGAS9429 (spyoA) Bacteria 1877 55.1 % (1035) 69.7 % (1308) 24.5 % (460) 38.5 % 21 aa 1755 aa
Streptococcus pyogenes str. Manfredo (spyoB) Bacteria 1746 55.8 % (975) 71.7 % (1252) 24.2 % (423) 38.6 % 35 aa 1646 aa
Streptococcus sanguinis SK36 (ssan0) Bacteria 2270 56.7 % (1286) 71.2 % (1617) 30.0 % (680) 43.4 % 30 aa 3047 aa
Streptococcus suis 05ZYH33 (ssui0) Bacteria 2186 55.9 % (1223) 71.7 % (1568) 25.1 % (548) 41.1 % 30 aa 2274 aa
Streptococcus suis 98HAH33 (ssui1) Bacteria 2189 55.0 % (1203) 71.0 % (1555) 24.6 % (538) 41.1 % 30 aa 1969 aa
Streptococcus thermophilus CNRZ1066 (sthe0) Bacteria 1915 57.3 % (1098) 71.6 % (1371) 24.1 % (462) 39.1 % 20 aa 1464 aa
Streptococcus thermophilus LMG 18311 (sthe1) Bacteria 1889 58.2 % (1099) 72.2 % (1363) 24.7 % (466) 39.1 % 30 aa 1470 aa
Streptococcus thermophilus LMD-9 (sthe2) Bacteria 1716 54.1 % (928) 67.8 % (1164) 24.8 % (425) 39.1 % 17 aa 1618 aa
Onion yellows phytoplasma OY-M (past0) Bacteria 754 58.8 % (443) 70.8 % (534) 28.2 % (213) 27.7 % 33 aa 1571 aa
Onion yellows phytoplasma OY-M (past0) Bacteria 754 58.8 % (443) 70.8 % (534) 28.2 % (213) 27.7 % 33 aa 1571 aa
Mesoplasma florum L1 (mflo0) Bacteria 683 66.2 % (452) 79.6 % (544) 24.5 % (167) 27.0 % 37 aa 1814 aa
Mycoplasma capricolum subsp. capricolum ATCC 27343 (mcap1) Bacteria 812 57.3 % (465) 76.5 % (621) 25.1 % (204) 23.8 % 33 aa 1965 aa
Mycoplasma gallisepticum R (mgal0) Bacteria 726 59.8 % (434) 77.0 % (559) 25.1 % (182) 31.5 % 37 aa 1976 aa
Mycoplasma genitalium G-37 (mgen0) Bacteria 476 68.1 % (324) 81.5 % (388) 22.7 % (108) 31.7 % 37 aa 1805 aa
Mycoplasma hyopneumoniae 232 (mhyo0) Bacteria 691 54.8 % (379) 69.6 % (481) 30.1 % (208) 28.6 % 46 aa 3969 aa
Mycoplasma hyopneumoniae 7448 (mhyo1) Bacteria 663 57.0 % (378) 74.5 % (494) 28.2 % (187) 28.5 % 37 aa 2666 aa
Mycoplasma hyopneumoniae J (mhyo2) Bacteria 665 55.9 % (372) 74.4 % (495) 28.3 % (188) 28.5 % 37 aa 2660 aa
Mycoplasma mobile 163K (mmob0) Bacteria 635 62.7 % (398) 77.0 % (489) 23.3 % (148) 25.0 % 38 aa 4727 aa
Mycoplasma mycoides subsp. mycoides SC (mmyc0) Bacteria 1016 47.2 % (480) 68.5 % (696) 28.1 % (286) 24.0 % 36 aa 1972 aa
Mycoplasma penetrans HF-2 (mpen0) Bacteria 1037 52.9 % (549) 72.3 % (750) 27.9 % (289) 25.7 % 47 aa 3317 aa
Mycoplasma pneumoniae M129 (mpne0) Bacteria 688 55.8 % (384) 71.8 % (494) 23.0 % (158) 40.0 % 37 aa 1882 aa
Mycoplasma pulmonis UAB CTIP (mpul0) Bacteria 782 56.4 % (441) 72.4 % (566) 28.5 % (223) 26.6 % 37 aa 3216 aa
Mycoplasma synoviae 53 (msyn0) Bacteria 672 56.4 % (379) 68.3 % (459) 20.4 % (137) 28.5 % 37 aa 2638 aa
Ureaplasma parvum serovar 3 str. ATCC 700970 (uure0) Bacteria 611 58.3 % (356) 74.8 % (457) 26.4 % (161) 25.5 % 34 aa 5005 aa
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (fnuc0) Bacteria 2067 55.9 % (1155) 70.7 % (1462) 25.8 % (534) 27.2 % 20 aa 3165 aa
Pirellula sp. 1 (rbal0) Bacteria 7325 32.6 % (2388) 50.5 % (3699) 23.0 % (1685) 55.4 % 35 aa 8173 aa
Caulobacter crescentus CB15 (ccre0) Bacteria 3737 56.1 % (2097) 71.4 % (2669) 22.9 % (854) 67.2 % 30 aa 2479 aa
Bartonella bacilliformis KC583 (bbac1) Bacteria 1283 57.4 % (737) 69.0 % (885) 24.5 % (314) 38.2 % 37 aa 2884 aa
Bartonella henselae Houston-1 (bhen0) Bacteria 1488 56.3 % (838) 71.8 % (1068) 26.2 % (390) 38.2 % 41 aa 3036 aa
Bartonella quintana str. Toulouse (bqui0) Bacteria 1142 66.5 % (760) 78.6 % (898) 28.6 % (327) 38.8 % 41 aa 2855 aa
Bradyrhizobium japonicum USDA 110 (bjap0) Bacteria 8317 53.6 % (4454) 66.4 % (5523) 24.7 % (2052) 64.1 % 30 aa 5685 aa
Bradyrhizobium sp. ORS278 (brad0) Bacteria 6717 51.4 % (3451) 68.7 % (4616) 26.2 % (1757) 65.5 % 20 aa 5265 aa
Nitrobacter hamburgensis X14 (nham0) Bacteria 4326 44.3 % (1917) 65.0 % (2814) 23.4 % (1014) 61.6 % 31 aa 2845 aa
Nitrobacter winogradskyi Nb-255 (nwin0) Bacteria 3122 50.9 % (1589) 70.5 % (2200) 21.2 % (663) 62.0 % 41 aa 2002 aa
Rhodopseudomonas palustris CGA009 (rpal0) Bacteria 4822 58.2 % (2805) 73.8 % (3560) 26.2 % (1264) 65.0 % 25 aa 4335 aa
Rhodopseudomonas palustris BisB18 (rpal1) Bacteria 4886 53.2 % (2598) 70.8 % (3457) 26.4 % (1288) 65.0 % 35 aa 4435 aa
Rhodopseudomonas palustris BisB5 (rpal2) Bacteria 4397 56.0 % (2462) 71.1 % (3128) 26.7 % (1174) 64.8 % 35 aa 3094 aa
Rhodopseudomonas palustris HaA2 (rpal3) Bacteria 4683 57.8 % (2709) 73.5 % (3443) 26.8 % (1255) 66.0 % 35 aa 5769 aa
Rhodopseudomonas palustris BisA53 (rpal4) Bacteria 4878 49.9 % (2434) 68.6 % (3346) 26.8 % (1306) 64.4 % 31 aa 4651 aa
Brucella abortus biovar 1 str. 9-941 (babo0) Bacteria 3085 56.0 % (1729) 68.5 % (2114) 23.4 % (723) 57.2 % 28 aa 3422 aa
Brucella melitensis 16M (bmel0) Bacteria 3198 58.6 % (1875) 72.7 % (2324) 22.4 % (715) 57.2 % 41 aa 2867 aa
Brucella melitensis biovar Abortus (bmel1) Bacteria 3034 57.1 % (1731) 69.7 % (2115) 23.1 % (701) 57.2 % 30 aa 3422 aa
Brucella suis 1330 (bsui0) Bacteria 3273 54.4 % (1782) 66.9 % (2189) 23.5 % (768) 57.3 % 29 aa 3420 aa
Mesorhizobium sp. BNC1 (meso0) Bacteria 4543 56.9 % (2585) 74.3 % (3374) 23.8 % (1083) 61.1 % 41 aa 2950 aa
Mesorhizobium loti MAFF303099 (mlot0) Bacteria 7281 52.9 % (3855) 70.0 % (5098) 22.7 % (1650) 62.5 % 30 aa 3930 aa
Rhizobium etli CFN 42 (retl0) Bacteria 5963 57.3 % (3414) 74.1 % (4421) 23.4 % (1395) 61.0 % 32 aa 2825 aa
Agrobacterium tumefaciens str. C58 (atum0) Bacteria 5301 58.5 % (3102) 74.3 % (3939) 23.8 % (1263) 59.0 % 30 aa 2802 aa
Agrobacterium tumefaciens str. C58 (atum1) Bacteria 5402 57.7 % (3118) 72.8 % (3930) 23.1 % (1246) 59.0 % 22 aa 2831 aa
Rhizobium leguminosarum bv. viciae 3841 (rleg0) Bacteria 7150 57.0 % (4078) 73.9 % (5285) 23.7 % (1697) 60.9 % 40 aa 2839 aa
Sinorhizobium meliloti 1021 (smel0) Bacteria 6205 56.9 % (3529) 74.0 % (4594) 23.8 % (1478) 62.2 % 31 aa 2832 aa
Hyphomonas neptunium ATCC 15444 (hnep0) Bacteria 3505 54.4 % (1907) 71.9 % (2520) 25.9 % (909) 61.9 % 30 aa 2085 aa
Maricaulis maris MCS10 (mmar3) Bacteria 3063 54.3 % (1663) 72.7 % (2227) 28.0 % (858) 62.7 % 41 aa 4368 aa
Jannaschia sp. CCS1 (jann0) Bacteria 4283 54.5 % (2336) 70.7 % (3028) 24.3 % (1039) 62.2 % 41 aa 3486 aa
Paracoccus denitrificans PD1222 (pden0) Bacteria 5077 54.1 % (2745) 72.6 % (3685) 23.4 % (1190) 66.8 % 36 aa 2779 aa
Rhodobacter sphaeroides 2.4.1 (rsph0) Bacteria 4242 54.6 % (2315) 71.3 % (3023) 23.8 % (1011) 68.8 % 20 aa 2769 aa
Rhodobacter sphaeroides ATCC 17029 (rsph1) Bacteria 4132 54.4 % (2247) 72.6 % (3000) 25.0 % (1031) 69.0 % 26 aa 3634 aa
Rhodobacter sphaeroides ATCC 17025 (rsph2) Bacteria 4333 48.7 % (2109) 69.2 % (2999) 23.4 % (1012) 68.2 % 26 aa 2761 aa
Roseobacter denitrificans OCh 114 (rden0) Bacteria 4129 55.4 % (2289) 71.3 % (2944) 23.9 % (987) 58.9 % 30 aa 6682 aa
Silicibacter sp. TM1040 (sili0) Bacteria 3864 56.4 % (2180) 73.7 % (2849) 22.3 % (862) 60.1 % 41 aa 2150 aa
Silicibacter pomeroyi DSS-3 (spom1) Bacteria 4252 59.5 % (2531) 76.6 % (3255) 23.9 % (1017) 64.1 % 30 aa 8093 aa
Acidiphilium cryptum JF-5 (acry0) Bacteria 3063 57.0 % (1746) 73.9 % (2265) 23.7 % (725) 68.0 % 0 aa 1503 aa
Gluconobacter oxydans 621H (goxy0) Bacteria 2664 52.3 % (1393) 72.0 % (1917) 20.0 % (532) 60.8 % 26 aa 1750 aa
Granulibacter bethesdensis CGDNIH1 (gbet0) Bacteria 2437 56.3 % (1373) 72.6 % (1770) 21.7 % (530) 59.1 % 30 aa 4061 aa
Magnetospirillum magneticum AMB-1 (mmag0) Bacteria 4559 50.3 % (2292) 68.0 % (3099) 24.5 % (1116) 65.1 % 34 aa 9529 aa
Rhodospirillum rubrum ATCC 11170 (rrub0) Bacteria 3841 56.2 % (2159) 69.3 % (2662) 25.1 % (963) 65.4 % 20 aa 1981 aa
Anaplasma marginale str. St. Maries (amar0) Bacteria 949 57.5 % (546) 72.9 % (692) 33.2 % (315) 49.8 % 39 aa 3492 aa
Anaplasma phagocytophilum HZ (apha0) Bacteria 1264 43.7 % (552) 54.5 % (689) 26.3 % (333) 41.6 % 30 aa 3373 aa
Ehrlichia canis str. Jake (ecan0) Bacteria 925 58.7 % (543) 73.8 % (683) 32.3 % (299) 29.0 % 42 aa 4245 aa
Ehrlichia chaffeensis Arkansas (echa0) Bacteria 1105 48.9 % (540) 60.5 % (668) 31.3 % (346) 30.1 % 30 aa 4313 aa
Ehrlichia ruminantium str. Welgevonden (erum0) Bacteria 888 59.6 % (529) 75.7 % (672) 34.3 % (305) 27.5 % 42 aa 3715 aa
Ehrlichia ruminantium str. Welgevonden (erum1) Bacteria 958 56.7 % (543) 71.9 % (689) 35.8 % (343) 27.5 % 42 aa 3558 aa
Ehrlichia ruminantium str. Gardel (erum2) Bacteria 950 57.2 % (543) 72.5 % (689) 35.5 % (337) 27.5 % 42 aa 3448 aa
Neorickettsia sennetsu str. Miyayama (nsen0) Bacteria 932 51.1 % (476) 60.1 % (560) 29.5 % (275) 41.1 % 29 aa 1921 aa
Orientia tsutsugamushi Boryong (otsu0) Bacteria 1182 45.3 % (535) 61.2 % (723) 28.8 % (341) 30.5 % 32 aa 2299 aa
Rickettsia bellii RML369-C (rbel0) Bacteria 1429 51.2 % (732) 70.5 % (1007) 27.3 % (390) 31.6 % 40 aa 1981 aa
Rickettsia conorii str. Malish 7 (rcon0) Bacteria 1374 45.5 % (625) 58.7 % (806) 28.0 % (385) 32.4 % 41 aa 2021 aa
Rickettsia felis URRWXCal2 (rfel0) Bacteria 1512 49.5 % (748) 70.2 % (1062) 26.4 % (399) 32.5 % 40 aa 3122 aa
Rickettsia prowazekii Madrid E (rpro0) Bacteria 834 65.0 % (542) 78.9 % (658) 32.5 % (271) 29.0 % 41 aa 2340 aa
Rickettsia typhi str. Wilmington (rtyp0) Bacteria 838 64.1 % (537) 76.8 % (644) 32.6 % (273) 28.9 % 24 aa 2331 aa
Wolbachia endosymbiont of Drosophila melanogaster (wend0) Bacteria 1195 49.5 % (591) 61.8 % (738) 24.7 % (295) 35.2 % 30 aa 2843 aa
Wolbachia endosymbiont strain TRS of Brugia malayi (wend1) Bacteria 805 60.6 % (488) 70.3 % (566) 25.8 % (208) 34.2 % 42 aa 2839 aa
Candidatus Pelagibacter ubique HTCC1062 (pubi0) Bacteria 1354 64.9 % (879) 76.8 % (1040) 26.2 % (355) 29.7 % 29 aa 7317 aa
Erythrobacter litoralis HTCC2594 (elit0) Bacteria 3011 53.2 % (1601) 69.2 % (2085) 24.2 % (728) 63.1 % 23 aa 2409 aa
Novosphingobium aromaticivorans DSM 12444 (naro0) Bacteria 3324 55.5 % (1846) 71.2 % (2368) 22.9 % (762) 65.2 % 41 aa 3069 aa
Sphingopyxis alaskensis RB2256 (sala0) Bacteria 3195 55.7 % (1779) 73.1 % (2337) 23.4 % (747) 65.5 % 41 aa 2090 aa
Zymomonas mobilis ZM4 (zmob0) Bacteria 2041 55.1 % (1125) 67.2 % (1372) 20.4 % (416) 46.3 % 30 aa 2984 aa
Bordetella avium 197N (bavi0) Bacteria 3382 60.1 % (2033) 73.5 % (2485) 25.1 % (849) 61.6 % 24 aa 6460 aa
Bordetella bronchiseptica RB50 (bbro0) Bacteria 4994 63.5 % (3171) 77.7 % (3879) 22.9 % (1146) 68.1 % 31 aa 4218 aa
Bordetella parapertussis 12822 (bpar0) Bacteria 4185 65.4 % (2736) 79.0 % (3308) 23.3 % (975) 68.1 % 37 aa 4218 aa
Bordetella pertussis Tohama I (bper0) Bacteria 3447 64.2 % (2212) 80.6 % (2778) 22.2 % (766) 67.7 % 37 aa 4196 aa
Burkholderia mallei ATCC 23344 (bmal0) Bacteria 5025 53.7 % (2700) 67.6 % (3397) 20.3 % (1022) 68.5 % 15 aa 4580 aa
Burkholderia mallei NCTC 10229 (bmal1) Bacteria 5510 48.4 % (2667) 65.1 % (3588) 20.3 % (1119) 68.5 % 23 aa 5778 aa
Burkholderia mallei NCTC 10247 (bmal2) Bacteria 5852 46.3 % (2712) 57.8 % (3382) 19.4 % (1135) 68.5 % 37 aa 5860 aa
Burkholderia mallei SAVP1 (bmal3) Bacteria 5189 47.9 % (2487) 61.1 % (3171) 20.0 % (1037) 68.4 % 29 aa 5822 aa
Burkholderia xenovorans LB400 (bxen0) Bacteria 8702 56.2 % (4893) 72.5 % (6311) 23.5 % (2041) 62.6 % 30 aa 4726 aa
Burkholderia cenocepacia AU 1054 (bcen0) Bacteria 6477 58.3 % (3777) 74.2 % (4808) 24.4 % (1580) 66.9 % 30 aa 4509 aa
Burkholderia cenocepacia HI2424 (bcen1) Bacteria 6919 55.2 % (3821) 67.8 % (4689) 24.2 % (1671) 66.8 % 30 aa 4509 aa
Burkholderia cepacia AMMD (bcep0) Bacteria 6617 55.5 % (3673) 73.3 % (4853) 24.1 % (1595) 66.8 % 30 aa 4478 aa
Burkholderia sp. 383 (burk0) Bacteria 7717 57.2 % (4412) 73.7 % (5688) 24.3 % (1876) 66.3 % 30 aa 4283 aa
Burkholderia vietnamiensis G4 (bvie0) Bacteria 7617 45.9 % (3500) 65.6 % (4998) 22.7 % (1730) 65.7 % 30 aa 4497 aa
Burkholderia pseudomallei K96243 (bpse0) Bacteria 5729 56.0 % (3210) 66.8 % (3828) 24.5 % (1406) 68.1 % 30 aa 6274 aa
Burkholderia pseudomallei 1710b (bpse1) Bacteria 6347 49.1 % (3115) 65.6 % (4162) 22.0 % (1396) 68.0 % 29 aa 6274 aa
Burkholderia pseudomallei 1106a (bpse2) Bacteria 7183 42.6 % (3060) 57.2 % (4110) 19.6 % (1407) 68.3 % 37 aa 6272 aa
Burkholderia pseudomallei 668 (bpse3) Bacteria 7230 42.6 % (3079) 57.1 % (4131) 19.8 % (1433) 68.3 % 37 aa 6271 aa
Burkholderia thailandensis E264 (btha0) Bacteria 5634 54.1 % (3050) 72.3 % (4073) 23.4 % (1317) 67.6 % 30 aa 5628 aa
Ralstonia eutropha JMP134 (reut0) Bacteria 6446 60.5 % (3897) 76.3 % (4921) 23.1 % (1488) 64.4 % 38 aa 3081 aa
Ralstonia eutropha H16 (reut1) Bacteria 6626 58.8 % (3893) 75.3 % (4987) 23.4 % (1551) 66.3 % 30 aa 3406 aa
Ralstonia metallidurans CH34 (rmet0) Bacteria 6319 56.4 % (3564) 72.9 % (4605) 24.5 % (1551) 63.5 % 31 aa 3714 aa
Polynucleobacter sp. QLW-P1DMWA-1 (poly0) Bacteria 2077 61.5 % (1278) 76.1 % (1580) 27.1 % (563) 44.8 % 44 aa 10429 aa
Ralstonia solanacearum GMI1000 (rsol0) Bacteria 5120 52.7 % (2697) 70.3 % (3600) 25.0 % (1282) 67.0 % 20 aa 6889 aa
Acidovorax avenae subsp. citrulli AAC00-1 (aave0) Bacteria 4709 50.4 % (2371) 69.9 % (3293) 23.6 % (1111) 68.5 % 37 aa 3401 aa
Acidovorax sp. JS42 (acid0) Bacteria 4155 50.9 % (2115) 70.2 % (2917) 24.1 % (1003) 66.1 % 24 aa 2026 aa
Polaromonas naphthalenivorans CJ2 (pnap0) Bacteria 4929 51.4 % (2532) 70.9 % (3494) 22.1 % (1088) 61.7 % 33 aa 2731 aa
Polaromonas sp. JS666 (pola0) Bacteria 5453 57.6 % (3142) 73.7 % (4019) 23.3 % (1273) 62.0 % 34 aa 2793 aa
Rhodoferax ferrireducens DSM 15236 (rfer0) Bacteria 4418 58.9 % (2600) 75.3 % (3327) 26.2 % (1158) 59.6 % 38 aa 3026 aa
Verminephrobacter eiseniae EF01-2 (veis0) Bacteria 4947 57.1 % (2825) 75.4 % (3732) 21.3 % (1053) 65.2 % 39 aa 7434 aa
Methylibium petroleiphilum PM1 (mpet0) Bacteria 4449 51.0 % (2267) 68.2 % (3036) 23.8 % (1057) 68.8 % 29 aa 2092 aa
Thiobacillus denitrificans ATCC 25259 (tden1) Bacteria 2827 57.9 % (1636) 73.3 % (2073) 27.0 % (762) 66.1 % 30 aa 3472 aa
Methylobacillus flagellatus KT (mfla0) Bacteria 2753 60.2 % (1656) 75.0 % (2066) 28.4 % (781) 55.7 % 35 aa 3332 aa
Chromobacterium violaceum ATCC 12472 (cvio0) Bacteria 4407 54.4 % (2397) 70.1 % (3091) 24.7 % (1087) 64.8 % 37 aa 4130 aa
Neisseria gonorrhoeae FA 1090 (ngon0) Bacteria 2002 50.8 % (1018) 64.5 % (1292) 21.0 % (421) 52.7 % 36 aa 1977 aa
Neisseria meningitidis MC58 (nmen0) Bacteria 2063 55.1 % (1136) 67.8 % (1399) 23.0 % (475) 51.5 % 22 aa 2703 aa
Neisseria meningitidis Z2491 (nmen1) Bacteria 1909 55.9 % (1067) 70.1 % (1338) 23.6 % (450) 51.8 % 30 aa 2015 aa
Neisseria meningitidis FAM18 (nmen2) Bacteria 1917 56.4 % (1081) 71.6 % (1372) 23.6 % (452) 51.6 % 30 aa 2029 aa
Nitrosomonas europaea ATCC 19718 (neur0) Bacteria 2462 57.4 % (1412) 77.6 % (1911) 25.9 % (637) 50.7 % 42 aa 3064 aa
Nitrosomonas eutropha C91 (nuet0) Bacteria 2550 54.2 % (1383) 73.0 % (1861) 28.0 % (714) 48.5 % 31 aa 2985 aa
Nitrosospira multiformis ATCC 25196 (nmul0) Bacteria 2805 56.0 % (1572) 72.8 % (2043) 27.5 % (772) 53.9 % 41 aa 5216 aa
Azoarcus sp. EbN1 (azoa0) Bacteria 4598 47.5 % (2185) 65.7 % (3022) 20.6 % (949) 64.7 % 14 aa 2043 aa
Azoarcus sp. BH72 (azoa1) Bacteria 3989 57.5 % (2295) 74.5 % (2973) 26.5 % (1058) 67.9 % 31 aa 2109 aa
Dechloromonas aromatica RCB (daro0) Bacteria 4171 57.2 % (2387) 73.5 % (3064) 28.4 % (1185) 59.2 % 37 aa 4854 aa
Bdellovibrio bacteriovorus HD100 (bbac0) Bacteria 3583 47.4 % (1697) 66.5 % (2384) 29.3 % (1050) 50.6 % 30 aa 2828 aa
Desulfotalea psychrophila LSv54 (dpsy0) Bacteria 3236 51.7 % (1673) 67.3 % (2178) 29.8 % (964) 46.6 % 31 aa 4725 aa
Desulfovibrio desulfuricans G20 (ddes0) Bacteria 3775 49.2 % (1858) 64.7 % (2441) 23.7 % (894) 57.8 % 30 aa 3252 aa
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough (dvul0) Bacteria 3531 48.5 % (1712) 63.9 % (2256) 23.3 % (822) 63.3 % 18 aa 3038 aa
Desulfovibrio vulgaris subsp. vulgaris DP4 (dvul1) Bacteria 3091 53.4 % (1652) 72.2 % (2233) 25.6 % (790) 63.2 % 32 aa 3038 aa
Lawsonia intracellularis PHE/MN1-00 (lint2) Bacteria 1342 59.6 % (800) 75.9 % (1019) 28.6 % (384) 33.1 % 67 aa 8746 aa
Geobacter metallireducens GS-15 (gmet0) Bacteria 3532 59.5 % (2103) 77.2 % (2727) 27.1 % (958) 59.5 % 32 aa 3507 aa
Geobacter sulfurreducens PCA (gsul0) Bacteria 3447 56.7 % (1955) 73.2 % (2522) 28.4 % (979) 60.9 % 30 aa 5899 aa
Geobacter uraniumreducens Rf4 (gura0) Bacteria 4357 52.7 % (2297) 75.6 % (3296) 28.7 % (1251) 54.2 % 31 aa 7157 aa
Pelobacter carbinolicus DSM 2380 (pcar0) Bacteria 3353 55.6 % (1865) 72.3 % (2424) 26.2 % (877) 55.1 % 29 aa 1925 aa
Pelobacter propionicus DSM 2379 (ppro1) Bacteria 3804 51.7 % (1966) 69.6 % (2648) 26.1 % (993) 58.5 % 37 aa 2954 aa
Anaeromyxobacter dehalogenans 2CP-C (adeh0) Bacteria 4346 52.7 % (2291) 69.6 % (3023) 25.5 % (1109) 74.9 % 38 aa 4074 aa
Myxococcus xanthus DK 1622 (mxan0) Bacteria 7331 47.0 % (3443) 66.7 % (4888) 22.2 % (1624) 68.9 % 30 aa 14274 aa
Syntrophus aciditrophicus SB (saci1) Bacteria 3168 51.1 % (1618) 66.5 % (2106) 24.1 % (764) 51.5 % 39 aa 1606 aa
Syntrophobacter fumaroxidans MPOB (sfum0) Bacteria 4064 53.2 % (2161) 71.9 % (2923) 27.1 % (1101) 59.9 % 38 aa 2031 aa
Campylobacter fetus subsp. fetus 82-40 (cfet0) Bacteria 1719 56.1 % (964) 73.8 % (1268) 28.9 % (496) 33.3 % 33 aa 1745 aa
Campylobacter jejuni subsp. jejuni 81-176 (cjei1) Bacteria 1758 54.1 % (951) 70.8 % (1245) 28.0 % (492) 30.5 % 37 aa 1932 aa
Campylobacter jejuni subsp. jejuni NCTC 11168 (cjej0) Bacteria 1624 58.1 % (943) 75.1 % (1220) 27.9 % (453) 30.5 % 14 aa 1517 aa
Campylobacter jejuni RM1221 (cjej1) Bacteria 1838 54.7 % (1005) 69.2 % (1272) 26.1 % (480) 30.3 % 30 aa 1899 aa
Thiomicrospira denitrificans ATCC 33889 (tden2) Bacteria 2097 60.2 % (1262) 76.7 % (1608) 27.3 % (572) 34.5 % 37 aa 1864 aa
Helicobacter acinonychis Sheeba (haci0) Bacteria 1618 48.0 % (776) 63.8 % (1033) 23.1 % (374) 38.2 % 30 aa 3216 aa
Helicobacter hepaticus ATCC 51449 (hhep0) Bacteria 1875 52.5 % (984) 66.5 % (1247) 28.5 % (535) 35.9 % 30 aa 2894 aa
Helicobacter pylori 26695 (hpyl0) Bacteria 1566 50.5 % (791) 67.8 % (1062) 24.6 % (386) 38.9 % 12 aa 2893 aa
Helicobacter pylori J99 (hpyl1) Bacteria 1491 54.2 % (808) 70.5 % (1051) 25.4 % (379) 39.2 % 21 aa 3194 aa
Helicobacter pylori HPAG1 (hpyl2) Bacteria 1544 53.1 % (820) 61.0 % (942) 25.2 % (389) 39.1 % 21 aa 3185 aa
Wolinella succinogenes DSMZ 1740 (wsuc0) Bacteria 2044 61.4 % (1256) 76.3 % (1560) 28.5 % (583) 48.5 % 33 aa 2883 aa
Aeromonas hydrophila subsp. hydrophila ATCC 7966 (ahyd0) Bacteria 4122 58.9 % (2427) 75.0 % (3093) 28.4 % (1169) 61.5 % 15 aa 5047 aa
Marinobacter aquaeolei VT8 (maqu0) Bacteria 4272 51.1 % (2184) 72.6 % (3101) 25.4 % (1083) 56.9 % 36 aa 2570 aa
Saccharophagus degradans 2-40 (sdeg0) Bacteria 4008 54.7 % (2193) 72.8 % (2918) 30.6 % (1226) 45.8 % 38 aa 14609 aa
Colwellia psychrerythraea 34H (cpsy0) Bacteria 4910 51.6 % (2535) 65.8 % (3231) 27.8 % (1365) 38.0 % 15 aa 3758 aa
Idiomarina loihiensis L2TR (iloi0) Bacteria 2628 61.1 % (1607) 75.7 % (1990) 28.6 % (751) 47.0 % 34 aa 1615 aa
Pseudoalteromonas atlantica T6c (patl0) Bacteria 4281 59.7 % (2555) 75.1 % (3217) 27.8 % (1192) 44.6 % 33 aa 4689 aa
Pseudoalteromonas haloplanktis TAC125 (phal0) Bacteria 3486 57.0 % (1988) 70.6 % (2461) 28.3 % (986) 40.1 % 20 aa 2410 aa
Psychromonas ingrahamii 37 (ping0) Bacteria 3545 56.2 % (1991) 73.1 % (2590) 27.5 % (974) 40.1 % 32 aa 4500 aa
Shewanella oneidensis MR-1 (sone0) Bacteria 4779 48.1 % (2299) 66.4 % (3173) 25.7 % (1227) 45.9 % 30 aa 5020 aa
Shewanella amazonensis SB2B (sama0) Bacteria 3645 58.9 % (2146) 76.0 % (2769) 29.0 % (1056) 53.6 % 34 aa 4214 aa
Shewanella baltica OS155 (sbal0) Bacteria 4489 53.1 % (2385) 73.4 % (3293) 27.3 % (1224) 46.2 % 31 aa 2693 aa
Shewanella denitrificans OS217 (sden0) Bacteria 3754 55.4 % (2078) 73.8 % (2769) 27.4 % (1027) 45.1 % 36 aa 5236 aa
Shewanella frigidimarina NCIMB 400 (sfri0) Bacteria 4029 55.4 % (2233) 74.3 % (2993) 29.7 % (1195) 41.6 % 36 aa 5787 aa
Shewanella sp. ANA-3 (shew0) Bacteria 4360 53.5 % (2334) 72.3 % (3152) 28.7 % (1250) 47.9 % 30 aa 5839 aa
Shewanella sp. MR-4 (shew1) Bacteria 3924 56.5 % (2219) 74.0 % (2903) 29.8 % (1168) 47.9 % 28 aa 5442 aa
Shewanella sp. MR-7 (shew2) Bacteria 4014 55.1 % (2213) 72.8 % (2922) 29.5 % (1184) 47.9 % 30 aa 4791 aa
Shewanella sp. W3-18-1 (shew3) Bacteria 4044 53.9 % (2181) 71.6 % (2894) 28.6 % (1158) 44.6 % 30 aa 2644 aa
Shewanella loihica PV-4 (sloi0) Bacteria 3859 56.9 % (2194) 73.7 % (2846) 29.6 % (1144) 53.7 % 34 aa 4836 aa
Shewanella putrefaciens CN-32 (sput0) Bacteria 3972 55.1 % (2189) 72.5 % (2881) 29.4 % (1166) 44.5 % 30 aa 4220 aa
Baumannia cicadellinicola Hc (Homalodisca coagulata) (bcic0) Bacteria 595 84.5 % (503) 91.1 % (542) 20.5 % (122) 33.2 % 31 aa 1408 aa
Candidatus Carsonella ruddii PV (crud0) Bacteria 182 61.5 % (112) 71.4 % (130) 23.1 % (42) 16.6 % 37 aa 1292 aa
Dichelobacter nodosus VCS1703A (dnod0) Bacteria 1280 61.3 % (785) 78.0 % (999) 25.2 % (323) 44.4 % 31 aa 2762 aa
Nitrosococcus oceani ATCC 19707 (noce0) Bacteria 3017 52.8 % (1592) 72.6 % (2189) 28.4 % (857) 50.3 % 37 aa 1867 aa
Alkalilimnicola ehrlichei MLHE-1 (aehr0) Bacteria 2865 57.1 % (1636) 75.6 % (2167) 26.7 % (766) 67.5 % 30 aa 6062 aa
Halorhodospira halophila SL1 (hhal0) Bacteria 2407 58.2 % (1400) 69.9 % (1683) 24.0 % (578) 68.0 % 36 aa 1896 aa
Buchnera aphidicola str. Sg (Schizaphis graminum) (baph0) Bacteria 552 84.2 % (465) 90.6 % (500) 17.0 % (94) 25.3 % 38 aa 1413 aa
Buchnera aphidicola str. Bp (Baizongia pistaciae) (baph1) Bacteria 507 84.6 % (429) 90.3 % (458) 18.5 % (94) 25.3 % 38 aa 1404 aa
Buchnera aphidicola str. Cc (Cinara cedri) (baph2) Bacteria 357 85.7 % (306) 91.9 % (328) 14.0 % (50) 20.1 % 38 aa 1410 aa
Buchnera aphidicola str. APS (Acyrthosiphon pisum) (buch0) Bacteria 574 84.8 % (487) 89.5 % (514) 16.0 % (92) 26.4 % 38 aa 1407 aa
Enterobacter sp. 638 (ente0) Bacteria 4240 58.9 % (2496) 74.7 % (3169) 26.0 % (1102) 52.9 % 35 aa 3967 aa
Escherichia coli K12 MG1655 (ecol0) Bacteria 4302 58.2 % (2504) 74.4 % (3201) 26.6 % (1146) 50.8 % 14 aa 2367 aa
Escherichia coli O157:H7 (ecol1) Bacteria 5447 52.0 % (2830) 68.7 % (3742) 24.0 % (1309) 50.5 % 14 aa 5291 aa
Escherichia coli O157:H7 EDL933 (ecol2) Bacteria 5449 51.4 % (2803) 68.8 % (3750) 24.3 % (1323) 50.4 % 9 aa 5188 aa
Escherichia coli CFT073 (ecol3) Bacteria 5379 51.9 % (2794) 65.8 % (3537) 25.1 % (1351) 50.5 % 14 aa 3216 aa
Escherichia coli K12 W3110 (ecol4) Bacteria 4227 60.8 % (2571) 75.2 % (3178) 26.7 % (1130) 50.8 % 14 aa 2367 aa
Escherichia coli UTI89 (ecol5) Bacteria 5211 53.1 % (2765) 66.6 % (3470) 25.6 % (1336) 50.6 % 21 aa 3262 aa
Escherichia coli 536 (ecol6) Bacteria 4629 57.0 % (2638) 72.3 % (3346) 26.7 % (1237) 50.5 % 21 aa 3242 aa
Escherichia coli APEC O1 (ecol7) Bacteria 4467 56.4 % (2520) 72.4 % (3233) 25.9 % (1156) 50.5 % 80 aa 3053 aa
Erwinia carotovora subsp. atroseptica SCRI1043 (ecar0) Bacteria 4472 58.3 % (2609) 73.9 % (3307) 26.7 % (1195) 51.0 % 31 aa 7523 aa
Photorhabdus luminescens subsp. laumondii TTO1 (plum0) Bacteria 4683 50.7 % (2373) 69.5 % (3255) 20.9 % (981) 42.8 % 30 aa 16367 aa
Salmonella enterica subsp. enterica serovar Typhi str. CT18 (styp0) Bacteria 4766 53.4 % (2543) 68.4 % (3262) 25.8 % (1230) 51.9 % 9 aa 3624 aa
Salmonella typhimurium LT2 (styp1) Bacteria 4554 57.1 % (2602) 72.7 % (3311) 27.2 % (1239) 52.2 % 14 aa 5559 aa
Salmonella enterica subsp. enterica serovar Typhi Ty2 (styp2) Bacteria 4323 57.0 % (2464) 71.3 % (3083) 26.7 % (1153) 52.1 % 13 aa 3624 aa
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 (styp3) Bacteria 4093 58.0 % (2373) 73.0 % (2986) 27.5 % (1125) 52.2 % 21 aa 4560 aa
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 (styp4) Bacteria 4666 54.2 % (2527) 69.2 % (3229) 26.2 % (1221) 52.1 % 21 aa 5559 aa
Shigella boydii Sb227 (sboy0) Bacteria 4284 53.7 % (2299) 71.1 % (3044) 25.5 % (1092) 51.1 % 14 aa 1653 aa
Shigella dysenteriae Sd197 (sdys0) Bacteria 4497 47.3 % (2129) 66.2 % (2977) 20.0 % (900) 51.0 % 14 aa 1588 aa
Shigella flexneri 2a str. 301 (sfle0) Bacteria 4443 52.8 % (2348) 72.0 % (3198) 25.4 % (1129) 50.7 % 13 aa 1522 aa
Shigella flexneri 2a str. 2457T (sfle1) Bacteria 4068 54.6 % (2223) 72.6 % (2953) 25.6 % (1043) 50.9 % 14 aa 1522 aa
Shigella flexneri 5 8401 (sfle2) Bacteria 4116 55.8 % (2297) 73.9 % (3041) 26.0 % (1072) 50.9 % 28 aa 1554 aa
Shigella sonnei Ss046 (sson0) Bacteria 4461 53.8 % (2401) 73.8 % (3290) 22.8 % (1017) 50.8 % 14 aa 1653 aa
Sodalis glossinidius str. morsitans (sglo0) Bacteria 2516 56.2 % (1414) 71.7 % (1805) 21.1 % (532) 54.5 % 33 aa 1484 aa
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis (wbre0) Bacteria 611 79.9 % (488) 88.9 % (543) 23.7 % (145) 22.5 % 38 aa 1405 aa
Yersinia enterocolitica subsp. enterocolitica 8081 (yent0) Bacteria 4051 57.3 % (2322) 74.5 % (3017) 27.1 % (1098) 47.2 % 18 aa 3161 aa
Yersinia pestis CO92 (ypes0) Bacteria 4083 56.7 % (2315) 73.0 % (2979) 25.8 % (1054) 47.6 % 14 aa 3705 aa
Yersinia pestis KIM (ypes1) Bacteria 4281 54.3 % (2323) 69.5 % (2976) 25.8 % (1105) 47.7 % 14 aa 3710 aa
Yersinia pestis biovar Medievalis str. 91001 (ypes2) Bacteria 4142 55.7 % (2309) 71.3 % (2955) 26.4 % (1092) 47.7 % 20 aa 3710 aa
Yersinia pseudotuberculosis IP 32953 (ypes3) Bacteria 4038 57.6 % (2326) 72.5 % (2928) 26.8 % (1082) 47.6 % 14 aa 5623 aa
Yersinia pestis Antiqua (ypes4) Bacteria 4364 56.8 % (2480) 73.9 % (3223) 24.8 % (1082) 47.7 % 22 aa 3705 aa
Yersinia pestis Nepal516 (ypes5) Bacteria 4094 57.5 % (2354) 73.6 % (3015) 25.5 % (1045) 47.6 % 29 aa 4270 aa
Candidatus Blochmannia floridanus (bflo0) Bacteria 583 84.2 % (491) 88.7 % (517) 23.0 % (134) 27.4 % 38 aa 1420 aa
Candidatus Blochmannia pennsylvanicus str. BPEN (bpen0) Bacteria 610 83.6 % (510) 89.7 % (547) 20.8 % (127) 29.6 % 38 aa 1416 aa
Coxiella burnetii RSA 493 (cbur0) Bacteria 2052 48.1 % (987) 62.5 % (1282) 23.3 % (479) 42.6 % 30 aa 1734 aa
Legionella pneumophila str. Lens (lpne0) Bacteria 2934 53.4 % (1568) 72.0 % (2113) 28.5 % (836) 38.4 % 34 aa 7919 aa
Legionella pneumophila str. Paris (lpne1) Bacteria 3166 53.2 % (1684) 71.6 % (2267) 28.6 % (904) 38.3 % 23 aa 7679 aa
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (lpne2) Bacteria 2942 54.7 % (1608) 70.8 % (2082) 29.0 % (854) 38.3 % 34 aa 3780 aa
Methylococcus capsulatus str. Bath (mcap0) Bacteria 2960 56.4 % (1668) 72.1 % (2135) 24.1 % (713) 63.6 % 24 aa 3349 aa
Alcanivorax borkumensis SK2 (abor0) Bacteria 2755 61.1 % (1684) 77.2 % (2128) 27.7 % (763) 54.7 % 33 aa 3600 aa
Hahella chejuensis KCTC 2396 (hche0) Bacteria 6778 46.8 % (3175) 64.6 % (4381) 24.2 % (1640) 53.9 % 29 aa 5711 aa
Chromohalobacter salexigens DSM 3043 (csal0) Bacteria 3298 62.2 % (2053) 76.3 % (2517) 25.2 % (831) 63.9 % 40 aa 3314 aa
Actinobacillus pleuropneumoniae L20 (aple0) Bacteria 2012 63.0 % (1268) 78.4 % (1577) 25.5 % (514) 41.3 % 37 aa 3347 aa
Haemophilus ducreyi 35000HP (hduc0) Bacteria 1717 54.5 % (935) 60.6 % (1040) 24.9 % (427) 38.2 % 30 aa 4919 aa
Haemophilus influenzae Rd (hinf0) Bacteria 1709 66.0 % (1128) 77.2 % (1320) 23.1 % (394) 38.2 % 21 aa 1694 aa
Haemophilus influenzae 86-028NP (hinf1) Bacteria 1791 61.5 % (1102) 74.0 % (1326) 22.4 % (401) 38.2 % 30 aa 1794 aa
Haemophilus somnus 129PT (hsom0) Bacteria 1798 60.4 % (1086) 75.4 % (1356) 23.4 % (420) 37.2 % 37 aa 5143 aa
Mannheimia succiniciproducens MBEL55E (msuc0) Bacteria 2384 58.7 % (1400) 70.8 % (1687) 24.1 % (574) 42.5 % 30 aa 5399 aa
Pasteurella multocida subsp. multocida str. Pm70 (pmul0) Bacteria 2014 66.9 % (1347) 78.7 % (1586) 27.3 % (549) 40.4 % 37 aa 3919 aa
Acinetobacter baumannii ATCC 17978 (abau0) Bacteria 3368 56.5 % (1904) 68.0 % (2290) 20.2 % (682) 38.9 % 32 aa 3216 aa
Acinetobacter sp. ADP1 (acin0) Bacteria 3325 57.6 % (1916) 71.8 % (2389) 25.3 % (841) 40.4 % 23 aa 3711 aa
Psychrobacter arcticus 273-4 (parc0) Bacteria 2120 59.6 % (1263) 74.5 % (1580) 23.4 % (497) 42.8 % 38 aa 6715 aa
Psychrobacter cryohalolentis K5 (pcry0) Bacteria 2511 61.1 % (1534) 76.1 % (1912) 25.1 % (630) 42.2 % 38 aa 2301 aa
Pseudomonas aeruginosa PAO1 (paer0) Bacteria 5568 59.2 % (3299) 75.5 % (4205) 26.8 % (1492) 66.6 % 10 aa 5627 aa
Pseudomonas aeruginosa UCBPP-PA14 (paer2) Bacteria 5892 54.9 % (3232) 73.0 % (4299) 27.0 % (1588) 66.3 % 23 aa 5212 aa
Pseudomonas entomophila L48 (pent0) Bacteria 5134 56.8 % (2914) 72.6 % (3726) 26.1 % (1339) 64.2 % 23 aa 8493 aa
Pseudomonas fluorescens Pf-5 (pflu0) Bacteria 6137 57.5 % (3530) 73.8 % (4531) 26.5 % (1628) 63.3 % 23 aa 6675 aa
Pseudomonas fluorescens PfO-1 (pflu1) Bacteria 5736 57.8 % (3315) 73.6 % (4224) 26.8 % (1540) 60.5 % 24 aa 5654 aa
Pseudomonas mendocina ymp (pmen0) Bacteria 4594 56.5 % (2597) 73.5 % (3376) 27.2 % (1249) 64.7 % 23 aa 5328 aa
Pseudomonas putida KT2440 (pput0) Bacteria 5350 56.6 % (3026) 73.6 % (3937) 25.3 % (1356) 61.5 % 23 aa 8682 aa
Pseudomonas stutzeri A1501 (pstu0) Bacteria 4128 55.7 % (2301) 73.1 % (3019) 27.1 % (1120) 63.9 % 31 aa 2444 aa
Pseudomonas syringae pv. tomato str. DC3000 (psyr0) Bacteria 5614 52.9 % (2968) 70.8 % (3975) 23.9 % (1340) 58.3 % 24 aa 6274 aa
Pseudomonas syringae pv. phaseolicola 1448A (psyr1) Bacteria 5171 56.6 % (2927) 73.3 % (3788) 24.1 % (1244) 57.9 % 24 aa 5107 aa
Pseudomonas syringae pv. syringae B728a (psyr2) Bacteria 5089 57.4 % (2923) 74.3 % (3781) 25.3 % (1286) 59.2 % 24 aa 13537 aa
Francisella tularensis subsp. tularensis SCHU S4 (ftul0) Bacteria 1603 57.0 % (914) 71.5 % (1146) 29.8 % (478) 32.3 % 32 aa 1422 aa
Francisella tularensis subsp. holarctica LVS (ftul1) Bacteria 1754 56.4 % (990) 72.3 % (1269) 29.4 % (515) 32.2 % 36 aa 1444 aa
Francisella tularensis subsp. tularensis FSC 198 (ftul2) Bacteria 1605 55.3 % (887) 70.7 % (1135) 29.9 % (480) 32.3 % 32 aa 1422 aa
Francisella tularensis subsp. holarctica OSU18 (ftul3) Bacteria 1555 55.9 % (869) 68.9 % (1072) 30.0 % (467) 32.2 % 29 aa 1444 aa
Francisella tularensis subsp. novicida U112 (ftul4) Bacteria 1719 58.2 % (1000) 73.4 % (1262) 31.7 % (545) 32.5 % 37 aa 1852 aa
Francisella tularensis subsp. tularensis WY96-3418 (ftul5) Bacteria 1634 55.7 % (910) 72.1 % (1178) 29.1 % (476) 32.3 % 37 aa 1417 aa
Thiomicrospira crunogena XCL-2 (tcru0) Bacteria 2196 63.1 % (1385) 76.9 % (1688) 25.8 % (567) 43.1 % 37 aa 1597 aa
Photobacterium profundum ss9 (ppro0) Bacteria 5480 52.9 % (2897) 71.2 % (3900) 26.9 % (1475) 41.7 % 35 aa 4684 aa
Vibrio cholerae O1 biovar eltor str. N16961 (vcho0) Bacteria 3828 54.9 % (2103) 69.0 % (2642) 27.4 % (1049) 47.5 % 26 aa 4558 aa
Vibrio cholerae O395 (vcho1) Bacteria 3875 53.3 % (2064) 69.7 % (2701) 26.6 % (1029) 47.5 % 29 aa 3263 aa
Vibrio fischeri ES114 (vfis0) Bacteria 3802 59.4 % (2257) 74.4 % (2829) 28.2 % (1071) 38.4 % 21 aa 3971 aa
Vibrio parahaemolyticus RIMD 2210633 (vpar0) Bacteria 4832 54.5 % (2635) 68.6 % (3313) 27.2 % (1316) 45.4 % 14 aa 6084 aa
Vibrio vulnificus CMCP6 (vvul0) Bacteria 4538 56.5 % (2564) 73.2 % (3321) 25.6 % (1161) 46.7 % 20 aa 5206 aa
Vibrio vulnificus YJ016 (vvul1) Bacteria 5028 52.4 % (2633) 67.4 % (3390) 26.7 % (1341) 46.7 % 34 aa 5206 aa
Xanthomonas axonopodis pv. citri str. 306 (xaxo0) Bacteria 4429 54.4 % (2411) 71.1 % (3147) 24.9 % (1102) 64.7 % 30 aa 4753 aa
Xanthomonas campestris pv. campestris str. ATCC 33913 (xcam0) Bacteria 4181 55.9 % (2338) 73.2 % (3061) 25.3 % (1056) 65.1 % 21 aa 3961 aa
Xanthomonas campestris pv. vesicatoria (xcam1) Bacteria 4726 51.0 % (2409) 68.8 % (3253) 24.8 % (1172) 64.6 % 30 aa 3709 aa
Xanthomonas campestris pv. campestris str. 8004 (xcam2) Bacteria 4273 54.8 % (2341) 72.1 % (3080) 25.4 % (1086) 65.0 % 28 aa 3961 aa
Xanthomonas oryzae pv. oryzae KACC10331 (xory0) Bacteria 4539 43.0 % (1952) 64.4 % (2923) 21.2 % (961) 63.7 % 30 aa 2941 aa
Xanthomonas oryzae pv. oryzae MAFF 311018 (xory1) Bacteria 4372 46.2 % (2019) 67.8 % (2965) 23.0 % (1007) 63.7 % 30 aa 2927 aa
Xylella fastidiosa 9a5c (xfas0) Bacteria 2832 43.1 % (1222) 55.6 % (1575) 24.7 % (700) 52.6 % 30 aa 3455 aa
Xylella fastidiosa Temecula1 (xfas1) Bacteria 2036 55.9 % (1138) 70.3 % (1432) 25.6 % (522) 51.8 % 30 aa 3457 aa
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) (cmag0) Bacteria 976 73.1 % (713) 82.7 % (807) 23.1 % (225) 34.0 % 37 aa 2819 aa
Candidatus Vesicomyosocius okutanii HA (cves0) Bacteria 937 73.9 % (692) 82.8 % (776) 22.3 % (209) 31.6 % 37 aa 1506 aa
Magnetococcus sp. MC-1 (magn0) Bacteria 3716 48.6 % (1807) 71.1 % (2643) 24.2 % (898) 54.2 % 37 aa 15245 aa
Leptospira borgpetersenii serovar Hardjo-bovis JB197 (lbor0) Bacteria 2880 48.5 % (1396) 70.7 % (2035) 30.0 % (863) 40.2 % 37 aa 2587 aa
Leptospira borgpetersenii serovar Hardjo-bovis L550 (lbor1) Bacteria 2945 48.9 % (1440) 70.9 % (2087) 30.1 % (886) 40.2 % 37 aa 2587 aa
Leptospira interrogans serovar Lai str. 56601 (lint0) Bacteria 4725 36.4 % (1720) 51.9 % (2451) 26.6 % (1255) 35.0 % 30 aa 3141 aa
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 (lint1) Bacteria 3658 46.4 % (1697) 64.4 % (2356) 31.5 % (1152) 35.0 % 37 aa 3140 aa
Borrelia turicatae 91E135 (btur0) Bacteria 818 59.7 % (488) 75.8 % (620) 32.9 % (269) 29.1 % 37 aa 2301 aa
Borrelia afzelii PKo (bafz0) Bacteria 288 12.2 % (35) 25.0 % (72) 28.5 % (82) 27.8 % 17 aa 1277 aa
Borrelia burgdorferi B31 (bbur0) Bacteria 1653 35.2 % (582) 50.4 % (833) 27.9 % (462) 28.2 % 30 aa 2166 aa
Borrelia garinii PBi (bgar0) Bacteria 1270 44.2 % (561) 56.7 % (720) 26.7 % (339) 28.1 % 14 aa 2162 aa
Treponema denticola ATCC 35405 (tden0) Bacteria 2767 45.1 % (1248) 62.6 % (1731) 32.4 % (897) 37.9 % 30 aa 3320 aa
Treponema pallidum subsp. pallidum str. Nichols (tpal0) Bacteria 1031 53.2 % (549) 68.3 % (704) 24.8 % (256) 52.8 % 30 aa 1533 aa
Thermotoga maritima MSB8 (tmar0) Bacteria 1846 64.8 % (1197) 78.2 % (1443) 26.5 % (489) 46.2 % 30 aa 1690 aa
Thermotoga petrophila RKU-1 (tpet0) Bacteria 1785 64.5 % (1151) 79.9 % (1427) 26.3 % (469) 46.1 % 35 aa 1690 aa
Cryptosporidium hominis TU502 (chom0) Eukaryota 3934 38.4 % (1512) 60.0 % (2359) 25.4 % (998) - 9 aa 4725 aa
Cryptosporidium parvum (cpar0) Eukaryota 3805 43.7 % (1661) 68.9 % (2620) 29.6 % (1127) 30.2 % 49 aa 13413 aa
Plasmodium falciparum 3D7 (pfal0) Eukaryota 5049 41.5 % (2093) 70.6 % (3566) 35.0 % (1768) 21.8 % 13 aa 10589 aa
Plasmodium yoelii yoeliia str. 17XNL (pyoe0) Eukaryota 7861 28.6 % (2250) 57.7 % (4533) 33.2 % (2612) - 1 aa 6636 aa
Monosiga brevicollis (mbre0) Eukaryota 9196 50.4 % (4633) 72.7 % (6685) 30.9 % (2839) - 49 aa 17829 aa
Guillardia theta (gthe0) Eukaryota 632 53.3 % (337) 66.8 % (422) 23.9 % (151) 27.6 % 29 aa 2057 aa
Giardia lamblia ATCC 50803 (gint0) Eukaryota 6480 33.3 % (2160) 48.1 % (3117) 22.2 % (1436) - 33 aa 8161 aa
Leishmania major strain Friedlin (lmaj0) Eukaryota 1340 39.9 % (535) 64.0 % (857) 23.5 % (315) 59.3 % 51 aa 17392 aa
Trypanosoma brucei TREU927 (tbru0) Eukaryota 8758 35.8 % (3137) 60.6 % (5308) 25.6 % (2244) 45.8 % 30 aa 8214 aa
Mycosphaerella graminicola (mgra0) Eukaryota 11395 38.0 % (4330) 59.5 % (6775) 20.5 % (2337) - 49 aa 4637 aa
Phaeosphaeria nodorum SN15 (snod0) Eukaryota 16597 32.9 % (5462) 51.5 % (8550) 20.2 % (3352) - 16 aa 7290 aa
Aspergillus nidulans FGSC A4 (anid0) Eukaryota 3329 42.8 % (1425) 63.5 % (2114) 21.7 % (723) - 9 aa 6919 aa
Aspergillus fumigatus Af293 (afum0) Eukaryota 1293 39.7 % (513) 53.4 % (690) 0.0 % (0) 49.8 % 53 aa 4007 aa
Aspergillus niger ATCC 1015 (anig0) Eukaryota 11200 45.9 % (5137) 69.0 % (7724) 24.3 % (2724) - 49 aa 6284 aa
Aspergillus terreus (ater0) Eukaryota 10406 45.5 % (4733) 55.9 % (5815) 24.8 % (2576) - 49 aa 5842 aa
Histoplasma capsulatum (hcap0) Eukaryota 9349 35.7 % (3338) 58.5 % (5467) 16.9 % (1580) - 30 aa 4863 aa
Uncinocarpus reesii (uree0) Eukaryota 7798 41.3 % (3221) 64.3 % (5018) 20.1 % (1565) - 49 aa 5757 aa
Coccidioides immitis RS (cimm0) Eukaryota 10457 32.7 % (3417) 41.9 % (4378) 18.0 % (1880) - 29 aa 7862 aa
Botryotinia fuckeliana B05.10 (bcin0) Eukaryota 16448 28.5 % (4690) 44.1 % (7253) 18.6 % (3053) - 29 aa 6808 aa
Sclerotinia sclerotiorum 1980 (sscl0) Eukaryota 14522 29.6 % (4297) 46.6 % (6771) 18.5 % (2682) - 28 aa 6771 aa
Trichoderma reesei QM9414 (tree0) Eukaryota 9129 44.5 % (4061) 67.8 % (6189) 22.7 % (2068) - 49 aa 20873 aa
Fusarium verticillioides (fgra0) Eukaryota 13321 38.3 % (5108) 61.5 % (8195) 23.7 % (3153) - 29 aa 11197 aa
Fusarium verticillioides (fver0) Eukaryota 14195 39.2 % (5571) 49.9 % (7077) 22.1 % (3142) - 29 aa 7549 aa
Gibberella zeae PH-1 (gzea0) Eukaryota 11640 45.7 % (5322) 55.6 % (6468) 25.6 % (2980) - 11 aa 11999 aa
Nectria haematococca (nhae0) Eukaryota 15707 42.5 % (6682) 67.9 % (10667) 24.7 % (3875) - 49 aa 7649 aa
Fusarium oxysporum (foxy0) Eukaryota 17608 37.1 % (6539) 49.5 % (8720) 21.6 % (3801) - 29 aa 7531 aa
Magnaporthe grisea 70-15 (mgri0) Eukaryota 12841 35.5 % (4555) 57.0 % (7325) 22.4 % (2881) - 29 aa 6487 aa
Chaetomium globosum CBS 148.51 (cglo0) Eukaryota 11124 37.8 % (4210) 60.6 % (6744) 20.6 % (2288) - 3 aa 9223 aa
Neurospora crassa OR74A (ncra0) Eukaryota 9845 38.1 % (3750) 58.6 % (5774) 20.6 % (2029) - 29 aa 10820 aa
Yarrowia lipolytica CLIB122 (ylip0) Eukaryota 6521 47.6 % (3107) 68.6 % (4473) 22.7 % (1480) 49.0 % 15 aa 4696 aa
Candida lusitaniae (clus0) Eukaryota 5941 44.2 % (2627) 65.1 % (3867) 23.4 % (1390) - 28 aa 4176 aa
Debaryomyces hansenii CBS767 (dhan0) Eukaryota 6318 49.0 % (3093) 68.1 % (4304) 22.9 % (1444) 36.3 % 13 aa 4189 aa
Ashbya gossypii ATCC 10895 (agos0) Eukaryota 4726 51.7 % (2441) 72.7 % (3434) 20.1 % (948) 51.9 % 25 aa 4899 aa
Kluyveromyces lactis (klac0) Eukaryota 5327 50.4 % (2685) 69.5 % (3700) 22.2 % (1180) 38.8 % 40 aa 4915 aa
Saccharomyces kluyveri (sklu0) Eukaryota 2968 54.3 % (1611) 73.3 % (2177) 19.7 % (585) - 1 aa 3160 aa
Lodderomyces elongisporus (lelo0) Eukaryota 5796 45.8 % (2654) 66.7 % (3868) 25.1 % (1455) - 50 aa 3496 aa
Candida guilliermondii (cgui0) Eukaryota 5920 47.3 % (2798) 69.5 % (4116) 24.2 % (1431) - 34 aa 4897 aa
Pichia stipitis CBS 6054 (psti0) Eukaryota 4540 49.2 % (2233) 71.0 % (3223) 23.5 % (1065) 41.1 % 49 aa 4979 aa
Naumovia castellii (ncas0) Eukaryota 4677 55.1 % (2577) 74.9 % (3502) 19.7 % (921) - 1 aa 4933 aa
Saccharomyces cerevisiae (scer0) Eukaryota 5878 51.7 % (3041) 70.6 % (4152) 21.7 % (1278) 37.2 % 16 aa 4910 aa
Saccharomyces bayanus (sbay0) Eukaryota 8762 34.8 % (3053) 43.1 % (3774) 25.9 % (2270) - 1 aa 3266 aa
Saccharomyces kudriavzevii (skud0) Eukaryota 3768 51.3 % (1933) 70.8 % (2666) 20.0 % (753) - 1 aa 2158 aa
Saccharomyces mikatae (smik0) Eukaryota 8110 38.0 % (3078) 52.7 % (4270) 25.0 % (2029) - 1 aa 2672 aa
Saccharomyces paradoxus (spar0) Eukaryota 8008 37.8 % (3031) 52.7 % (4217) 26.2 % (2100) - 1 aa 4092 aa
Candida tropicalis (ctro0) Eukaryota 6258 45.3 % (2837) 55.1 % (3449) 25.7 % (1608) - 50 aa 3808 aa
Candida albicans (calb0) Eukaryota 403 44.4 % (179) 67.0 % (270) 26.3 % (106) - 65 aa 2252 aa
Candida glabrata (cgla0) Eukaryota 5181 52.3 % (2712) 72.8 % (3773) 21.3 % (1104) 38.8 % 41 aa 4880 aa
Schizosaccharomyces pombe 972h- (spom0) Eukaryota 5289 55.2 % (2918) 72.5 % (3836) 20.9 % (1106) 34.6 % 14 aa 4924 aa
Schizosaccharomyces japonicus (sjap0) Eukaryota 5167 49.2 % (2540) 67.9 % (3508) 18.0 % (928) - 30 aa 4765 aa
Coprinus cinereus (ccin0) Eukaryota 13544 32.6 % (4413) 55.7 % (7547) 20.1 % (2729) - 33 aa 4779 aa
Laccaria bicolor (lbic0) Eukaryota 20614 24.4 % (5031) 46.3 % (9541) 19.2 % (3951) - 49 aa 4776 aa
Cryptococcus neoformans var. neoformans JEC21 (cneo0) Eukaryota 6594 49.0 % (3234) 70.5 % (4651) 23.1 % (1523) 48.6 % 17 aa 4844 aa
Phanerochaete chrysosporium RP-78 (pchr0) Eukaryota 10048 43.4 % (4362) 66.0 % (6634) 21.1 % (2116) - 49 aa 4827 aa
Sporobolomyces roseus (sros0) Eukaryota 5536 48.1 % (2662) 69.9 % (3870) 21.2 % (1175) - 49 aa 4758 aa
Ustilago maydis 521 (umay0) Eukaryota 6522 47.6 % (3105) 69.2 % (4512) 24.2 % (1580) - 20 aa 5431 aa
Batrachochytrium dendrobatidis (bden0) Eukaryota 8818 39.1 % (3446) 47.0 % (4145) 21.1 % (1865) - 29 aa 4754 aa
Phycomyces blakesleeanus (pbla0) Eukaryota 14792 34.4 % (5093) 54.4 % (8051) 21.9 % (3236) - 49 aa 9068 aa
Encephalitozoon cuniculi GB-M1 (ecun0) Eukaryota 1996 47.4 % (946) 65.1 % (1299) 20.6 % (412) 47.3 % 52 aa 3436 aa
Rhizopus oryzae RA 99-880 (rory0) Eukaryota 17467 38.2 % (6675) 56.3 % (9833) 15.5 % (2704) - 29 aa 5940 aa
Naegleria gruberi (ngru0) Eukaryota 15753 42.5 % (6702) 67.2 % (10584) 23.6 % (3719) - 50 aa 6497 aa
Drosophila melanogaster (dmel0) Eukaryota 19793 54.9 % (10861) 71.8 % (14219) 30.9 % (6111) 42.1 % 25 aa 23015 aa
Anopheles gambiae (agam0) Eukaryota 11016 50.4 % (5547) 66.9 % (7367) 25.1 % (2763) - 22 aa 8582 aa
Aedes aegypti (aaeg0) Eukaryota 16789 51.9 % (8709) 69.5 % (11665) 29.8 % (4995) - 30 aa 11328 aa
Apis mellifera (amel0) Eukaryota 27768 51.5 % (14312) 62.9 % (17478) 28.5 % (7901) - 6 aa 7687 aa
Bombyx mori (bmor0) Eukaryota 21314 35.7 % (7612) 50.5 % (10753) 16.6 % (3542) - 28 aa 4621 aa
Branchiostoma floridae (bflo1) Eukaryota 50817 57.5 % (29237) 67.1 % (34086) 27.8 % (14151) - 49 aa 25209 aa
Oryzias latipes (olat0) Eukaryota 25880 61.1 % (15806) 79.1 % (20472) 27.3 % (7068) - 5 aa 26141 aa
Gasterosteus aculeatus (gacu0) Eukaryota 27671 63.4 % (17546) 79.9 % (22121) 27.4 % (7595) - 8 aa 26130 aa
Fugu rubripes (trub0) Eukaryota 26721 58.7 % (15677) 74.0 % (19778) 27.2 % (7281) - 46 aa 23275 aa
Tetraodon nigroviridis (tnig0) Eukaryota 28005 52.6 % (14736) 66.7 % (18668) 24.6 % (6888) - 24 aa 10495 aa
Danio rerio (drer0) Eukaryota 36078 66.3 % (23915) 83.9 % (30255) 27.6 % (9955) - 18 aa 18412 aa
Xenopus tropicalis (xtro0) Eukaryota 27916 57.6 % (16091) 75.3 % (21019) 29.0 % (8083) - 48 aa 9945 aa
Gallus gallus (ggal0) Eukaryota 22250 58.7 % (13071) 74.5 % (16570) 26.9 % (5978) - 14 aa 8787 aa
Loxodonta africana (lafr0) Eukaryota 15717 57.5 % (9034) 75.7 % (11896) 27.6 % (4332) - 8 aa 23984 aa
Echinops telfairi (etel0) Eukaryota 16582 58.7 % (9732) 75.3 % (12480) 24.9 % (4129) - 8 aa 23766 aa
Oryctolagus cuniculus (ocun0) Eukaryota 15441 59.4 % (9175) 72.8 % (11237) 25.0 % (3860) - 8 aa 23875 aa
Cavia porcellus (cpor0) Eukaryota 1761 57.0 % (1003) 71.6 % (1260) 33.2 % (584) - 21 aa 2125 aa
Mus musculus (mmus0) Eukaryota 32241 59.5 % (19172) 74.8 % (24113) 30.1 % (9703) - 10 aa 19467 aa
Rattus norvegicus (rnor0) Eukaryota 33745 63.0 % (21248) 79.4 % (26791) 30.0 % (10122) - 9 aa 8028 aa
Spermophilus tridecemlineatus (stri0) Eukaryota 14833 58.1 % (8623) 72.5 % (10748) 26.1 % (3868) - 10 aa 23866 aa
Macaca mulatta (mmul0) Eukaryota 36546 59.9 % (21908) 60.5 % (22120) 25.8 % (9424) - 8 aa 20568 aa
Homo sapiens (hsap0) Eukaryota 43797 59.3 % (25953) 75.4 % (33010) 27.2 % (11917) - 10 aa 24022 aa
Homo sapiens (hsap1) Eukaryota 137746 48.7 % (67030) 62.2 % (85710) 23.5 % (32310) - 10 aa 33423 aa
Homo sapiens (hsap2) Eukaryota 28983 59.1 % (17116) 73.2 % (21204) 27.5 % (7973) - 13 aa 33423 aa
Homo sapiens cDNA (huge0) Eukaryota 2038 63.9 % (1302) 86.8 % (1770) 22.4 % (456) - 73 aa 4658 aa
Pan troglodytes (ptro0) Eukaryota 34835 58.7 % (20433) 74.9 % (26090) 26.6 % (9276) - 10 aa 23949 aa
Otolemur garnettii (ogar0) Eukaryota 15480 59.0 % (9131) 68.9 % (10670) 25.9 % (4014) - 14 aa 23898 aa
Tupaia belangeri (tbel0) Eukaryota 15462 58.4 % (9029) 76.2 % (11786) 26.0 % (4018) - 8 aa 23880 aa
Canis familiaris (cfam0) Eukaryota 33651 67.9 % (22856) 78.4 % (26393) 5.8 % (1938) - 15 aa 14730 aa
Felis catus (fcat0) Eukaryota 14846 58.8 % (8726) 76.6 % (11371) 26.9 % (3996) - 10 aa 20032 aa
Bos taurus (btau0) Eukaryota 28334 59.2 % (16782) 77.5 % (21947) 27.9 % (7911) - 6 aa 23992 aa
Myotis lucifugus (mluc0) Eukaryota 16234 59.9 % (9727) 76.9 % (12484) 25.7 % (4172) - 8 aa 23841 aa
Dasypus novemcinctus (dnov0) Eukaryota 15552 57.9 % (9007) 74.8 % (11635) 25.5 % (3959) - 12 aa 23947 aa
Monodelphis domestica (mdom0) Eukaryota 32685 68.3 % (22309) 84.0 % (27469) 28.1 % (9189) - 11 aa 16075 aa
Ornithorhynchus anatinus (oana0) Eukaryota 24763 60.6 % (15008) 78.2 % (19367) 28.3 % (7015) - 38 aa 34242 aa
Ciona intestinalis (cint0) Eukaryota 14015 58.7 % (8232) 75.6 % (10591) 24.3 % (3402) - 35 aa 21226 aa
Ciona savignyi (csav0) Eukaryota 20150 55.4 % (11157) 71.4 % (14396) 25.5 % (5139) - 22 aa 18399 aa
Nematostella vectensis (nvec0) Eukaryota 27273 46.9 % (12798) 64.9 % (17696) 23.3 % (6346) - 46 aa 8745 aa
Caenorhabditis briggsae (cbri0) Eukaryota 14713 49.8 % (7327) 66.5 % (9790) 36.2 % (5329) - 22 aa 7747 aa
Caenorhabditis elegans (cele0) Eukaryota 23258 41.3 % (9600) 50.7 % (11789) 37.6 % (8738) 35.0 % 6 aa 18562 aa
Dictyostelium discoideum AX4 (ddis0) Eukaryota 13337 41.0 % (5468) 60.4 % (8061) 27.4 % (3652) 22.9 % 39 aa 11103 aa
Cyanidioschyzon merolae strain 10D (cmer0) Eukaryota 5254 53.2 % (2793) 72.6 % (3815) 23.2 % (1217) - 25 aa 6020 aa
Chlamydomonas reinhardtii (crei0) Eukaryota 15220 37.0 % (5635) 54.5 % (8301) 21.7 % (3297) - 12 aa 8188 aa
Ostreococcus lucimarinus (oluc0) Eukaryota 7651 46.6 % (3567) 67.4 % (5160) 17.0 % (1304) - 49 aa 4962 aa
Ostreococcus tauri (otau0) Eukaryota 7725 43.1 % (3331) 63.6 % (4911) 17.0 % (1312) - 49 aa 7247 aa
Oryza sativa (japonica cultivar-group) (osat0) Eukaryota 26887 44.6 % (11988) 64.0 % (17198) 27.9 % (7506) 43.6 % 10 aa 5436 aa
Oryza sativa cDNA(japonica cultivar-group) (osat1) Eukaryota 32071 44.4 % (14224) 60.6 % (19436) 26.4 % (8470) - 1 aa 1921 aa
Populus trichocarpa (ptri1) Eukaryota 45555 45.9 % (20915) 64.9 % (29551) 23.3 % (10613) - 49 aa 5317 aa
Arabidopsis thaliana (atha0) Eukaryota 30690 51.6 % (15833) 66.2 % (20314) 27.5 % (8453) 36.0 % 19 aa 5336 aa
Phaeodactylum tricornutum (ptri0) Eukaryota 10025 41.2 % (4133) 67.9 % (6809) 26.4 % (2644) - 49 aa 4825 aa
Thalassiosira pseudonana CCMP1335 (tpse0) Eukaryota 11390 39.5 % (4494) 66.4 % (7564) 22.8 % (2593) - 49 aa 8463 aa
Phytophthora infestans (pinf0) Eukaryota 22658 30.0 % (6806) 53.0 % (12002) 19.2 % (4361) - 29 aa 10550 aa
Phytophthora ramorum (pram0) Eukaryota 15743 44.2 % (6964) 58.9 % (9278) 24.4 % (3834) - 34 aa 10810 aa
Phytophthora sojae (psoj0) Eukaryota 19027 40.4 % (7696) 63.4 % (12056) 23.5 % (4470) - 9 aa 10590 aa
Pseudomonas aeruginosa phage phi CTX Viruses. (bpct0) Viruses 47 8.5 % (4) 31.9 % (15) 12.8 % (6) 62.6 % 35 aa 904 aa
Bacteriophage phig1e Viruses. (bpg10) Viruses 49 14.3 % (7) 30.6 % (15) 12.2 % (6) 42.7 % 49 aa 1662 aa
PA01 (bppa0) Viruses 34 14.7 % (5) 29.4 % (10) 8.8 % (3) % 23 aa 745 aa
RB69 (bprb0) Viruses 256 23.4 % (60) 38.3 % (98) 9.4 % (24) % 19 aa 1277 aa
Rd (bprd0) Viruses 47 17.0 % (8) 34.0 % (16) 8.5 % (4) % 38 aa 731 aa
S-PM2 (bpsp4) Viruses 241 17.8 % (43) 38.2 % (92) 6.6 % (16) % 25 aa 3779 aa
T3 (bpt30) Viruses 44 18.2 % (8) 36.4 % (16) 15.9 % (7) 49.9 % 25 aa 884 aa
¦ÕMFV1 (bppm1) Viruses 17 41.2 % (7) 64.7 % (11) 11.8 % (2) 53 aa 615 aa
Staphylococcus phage K Viruses. (bpk_0) Viruses 115 28.7 % (33) 48.7 % (56) 10.4 % (12) 99 aa 1351 aa
Bacteriophage A511 (bpa50) Viruses 11 9.1 % (1) 9.1 % (1) 0.0 % (0) 36.7 % 106 aa 562 aa
Bacteriophage Aaphi23 (bpaa0) Viruses 66 13.6 % (9) 27.3 % (18) 19.7 % (13) 42.5 % 27 aa 800 aa
Burkholderia cepacia phage Bcep781 (bpbc0) Viruses 61 11.5 % (7) 27.9 % (17) 4.9 % (3) 63.3 % 38 aa 873 aa
Burkholderia cepacia phage Bcep1 (bpbc1) Viruses 71 9.9 % (7) 21.1 % (15) 9.9 % (7) 636 % 41 aa 824 aa
Burkholderia cepacia phage Bcep43 (bpbc3) Viruses 66 10.6 % (7) 25.8 % (17) 7.6 % (5) 63.4 % 47 aa 824 aa
Burkholderia cenocepacia phage BcepB1A (bpbc5) Viruses 58 10.3 % (6) 27.6 % (16) 13.8 % (8) 54.5 % 53 aa 919 aa
Mycobacteriophage Bxz1 (bpbx1) Viruses 225 8.0 % (18) 24.0 % (54) 8.4 % (19) 64.8 % 31 aa 1370 aa
Bacteriophage EJ-1 (bpej0) Viruses 73 11.0 % (8) 30.1 % (22) 19.2 % (14) 39.6 % 34 aa 748 aa
Halovirus HF2 (bphf0) Viruses 114 9.6 % (11) 21.1 % (24) 6.1 % (7) 55.8 % 29 aa 1288 aa
Haemophilus phage HP1 (bphp0) Viruses 41 14.6 % (6) 34.1 % (14) 12.2 % (5) 40.0 % 61 aa 925 aa
Haemophilus phage HP2 (bphp1) Viruses 36 13.9 % (5) 38.9 % (14) 13.9 % (5) 39.9 % 61 aa 910 aa
Bacteriophage KVP40 (bpkv0) Viruses 381 16.8 % (64) 30.4 % (116) 11.3 % (43) 42.6 % 36 aa 1256 aa
Bacteriophage P4 (bpp40) Viruses 13 15.4 % (2) 38.5 % (5) 7.7 % (1) 49.5 % 88 aa 777 aa
Pseudomonas phage phiKZ (bpph0) Viruses 306 9.2 % (28) 32.4 % (99) 11.8 % (36) 36.8 % 63 aa 2237 aa
Virus PhiCh1 (bpph1) Viruses 98 9.2 % (9) 24.5 % (24) 5.1 % (5) 61.9 % 54 aa 581 aa
Cyanophage P-SSM2 (bpps3) Viruses 329 17.3 % (57) 38.9 % (128) 8.2 % (27) 24 aa 5195 aa
Cyanophage P-SSM4 (bpps4) Viruses 198 16.2 % (32) 32.3 % (64) 13.6 % (27) 35 aa 7312 aa
Vibrio harveyi bacteriophage VHML (bpvh0) Viruses 57 19.3 % (11) 42.1 % (24) 7.0 % (4) 50.6 % 33 aa 1023 aa
Bacteriophage WPhi (bpwp0) Viruses 44 13.6 % (6) 34.1 % (15) 11.4 % (5) 51.7 % 56 aa 815 aa
Burkholderia cenocepacia phage BcepMu (bpbc4) Viruses 53 9.4 % (5) 28.3 % (15) 15.1 % (8) 62.9 % 67 aa 846 aa
Enterobacteria phage Mu (bpmu0) Viruses 53 20.8 % (11) 37.7 % (20) 11.3 % (6) 52.1 % 39 aa 690 aa
Enterobacteria phage P1 (bpp11) Viruses 110 14.5 % (16) 36.4 % (40) 9.1 % (10) 47.3 % 31 aa 2255 aa
Enterobacteria phage 186 (bp180) Viruses 46 23.9 % (11) 41.3 % (19) 13.0 % (6) 53.1 % 58 aa 812 aa
Enterobacteria phage P2 (bpp20) Viruses 42 11.9 % (5) 38.1 % (16) 14.3 % (6) 50.2 % 56 aa 815 aa
Bacteriophage L-413C (bpl40) Viruses 40 10.0 % (4) 32.5 % (13) 17.5 % (7) 52.1 % 56 aa 913 aa
Bacteriophage PSP3 (bpps2) Viruses 42 11.9 % (5) 35.7 % (15) 9.5 % (4) 52.8 % 60 aa 814 aa
Bacteriophage K139 (bpk10) Viruses 44 13.6 % (6) 34.1 % (15) 6.8 % (3) 48.9 % 53 aa 800 aa
Bacteriophage 44RR2.8t (bp441) Viruses 252 23.0 % (58) 27.8 % (70) 6.7 % (17) 43.9 % 32 aa 1420 aa
Bacteriophage Aeh1 (bpae0) Viruses 331 18.1 % (60) 30.8 % (102) 11.2 % (37) 42.8 % 28 aa 1358 aa
Enterobacteria phage RB49 (bprb1) Viruses 272 20.6 % (56) 30.9 % (84) 11.0 % (30) % 32 aa 1246 aa
Bacteriophage RM 378 (bprm0) Viruses 146 13.7 % (20) 17.8 % (26) 9.6 % (14) 42.5 % 27 aa 1019 aa
Enterobacteria phage T4 (bpt40) Viruses 278 24.8 % (69) 36.0 % (100) 10.4 % (29) 35.3 % 26 aa 1289 aa
Acyrthosiphon pisum bacteriophage APSE-1 (bpap0) Viruses 54 13.0 % (7) 29.6 % (16) 18.5 % (10) 43.9 % 73 aa 993 aa
Burkholderia cepacia phage Bcep22 (bpbc2) Viruses 78 9.0 % (7) 41.0 % (32) 9.0 % (7) 65.3 % 32 aa 4602 aa
Bordetella phage BIP-1 (bpbi7) Viruses 48 20.8 % (10) 45.8 % (22) 8.3 % (4) 65.4 % 56 aa 2052 aa
Bordetella phage BMP-1 (bpbm0) Viruses 47 21.3 % (10) 46.8 % (22) 8.5 % (4) 65.4 % 56 aa 2052 aa
Bordetella phage BPP-1 (bpbp0) Viruses 49 20.4 % (10) 44.9 % (22) 10.2 % (5) 65.4 % 56 aa 2052 aa
Salmonella typhimurium bacteriophage ES18 (bpes0) Viruses 79 11.4 % (9) 25.3 % (20) 13.9 % (11) 26 aa 1124 aa
Bacteriophage H-19B (bph10) Viruses 22 18.2 % (4) 36.4 % (8) 13.6 % (3) 45.9 % 44 aa 315 aa
Mycoplasma virus P1 (bpp10) Viruses 11 27.3 % (3) 54.5 % (6) 0.0 % (0) 26.8 % 80 aa 694 aa
Cyanophage P60 (bpp60) Viruses 80 12.5 % (10) 30.0 % (24) 6.2 % (5) 53.2 % 40 aa 680 aa
Pseudomonas aeruginosa bacteriophage PaP2 (bppa2) Viruses 58 6.9 % (4) 22.4 % (13) 13.8 % (8) 45.4 % 48 aa 1849 aa
Cyanophage P-SSP7 (bpps5) Viruses 53 17.0 % (9) 34.0 % (18) 11.3 % (6) 26 aa 1245 aa
Shigella flexneri bacteriophage V (bpsf1) Viruses 53 17.0 % (9) 43.4 % (23) 13.2 % (7) 50.8 % 56 aa 611 aa
Salmonella typhimurium phage ST64B (bpst0) Viruses 56 16.1 % (9) 37.5 % (21) 8.9 % (5) 51.0 % 54 aa 642 aa
Salmonella typhimurium bacteriophage ST64T (bpst1) Viruses 65 20.0 % (13) 32.3 % (21) 10.8 % (7) 47.5 % 37 aa 725 aa
Vibriophage VP5 (bpvp1) Viruses 12 58.3 % (7) 66.7 % (8) 0.0 % (0) 50.5 % 105 aa 782 aa
Vibriophage VP2 (bpvp2) Viruses 14 50.0 % (7) 64.3 % (9) 0.0 % (0) 50.6 % 105 aa 782 aa
Enterobacteria phage epsilon15 (bpep0) Viruses 49 6.1 % (3) 14.3 % (7) 18.4 % (9) 50.8 % 35 aa 1070 aa
Bacteriophage KS7 (bpks0) Viruses 56 12.5 % (7) 30.4 % (17) 7.1 % (4) 20 aa 728 aa
Bacteriophage Mx8 (bpmx0) Viruses 86 8.1 % (7) 23.3 % (20) 11.6 % (10) 32 aa 743 aa
Enterobacteria phage P22 (bpp21) Viruses 36 22.2 % (8) 33.3 % (12) 5.6 % (2) 47.1 % 47 aa 667 aa
Enterobacteria phage Sf6 (bpsf2) Viruses 66 19.7 % (13) 30.3 % (20) 12.1 % (8) 47.5 % 27 aa 708 aa
Enterobacteria phage SP6 (bpsp0) Viruses 20 30.0 % (6) 35.0 % (7) 5.0 % (1) 46.1 % 42 aa 874 aa
Pseudomonas phage gh-1 (bpgh0) Viruses 42 19.0 % (8) 40.5 % (17) 7.1 % (3) 57.4 % 25 aa 1392 aa
Pseudomonas aeruginosa phage PaP3 (bppa1) Viruses 69 8.7 % (6) 23.2 % (16) 11.6 % (8) 52.1 % 26 aa 1056 aa
Bacteriophage phiYeO3-12 (bpph2) Viruses 59 23.7 % (14) 39.0 % (23) 15.3 % (9) 50.6 % 25 aa 1320 aa
Yersinia pestis phage phiA1122 (bpphD) Viruses 50 18.0 % (9) 38.0 % (19) 10.0 % (5) 48.3 % 27 aa 1318 aa
bacteriophage phiKMV (bpphF) Viruses 48 16.7 % (8) 37.5 % (18) 12.5 % (6) 62.3 % 64 aa 1337 aa
Roseophage SIO1 (bpsi0) Viruses 34 17.6 % (6) 17.6 % (6) 11.8 % (4) 46.2 % 77 aa 1484 aa
Enterobacteria phage T7 (bpt70) Viruses 58 19.0 % (11) 32.8 % (19) 12.1 % (7) 48.4 % 29 aa 1318 aa
Vibriophage VpV262 (bpvp0) Viruses 67 4.5 % (3) 25.4 % (17) 9.0 % (6) 49.5 % 46 aa 1536 aa
Staphylococcus phage 44AHJD (bp440) Viruses 21 19.0 % (4) 33.3 % (7) 9.5 % (2) 29.6 % 55 aa 755 aa
Bacteriophage B103 (bpb11) Viruses 17 64.7 % (11) 64.7 % (11) 5.9 % (1) 37.7 % 100 aa 860 aa
Streptococcus phage C1 (bpc10) Viruses 20 5.0 % (1) 45.0 % (9) 5.0 % (1) 34.6 % 51 aa 784 aa
Streptococcus phage Cp-1 (bpcp0) Viruses 28 14.3 % (4) 25.0 % (7) 14.3 % (4) 38.9 % 62 aa 586 aa
Bacillus phage GA-1 (bpga0) Viruses 35 34.3 % (12) 42.9 % (15) 22.9 % (8) 34.7 % 25 aa 740 aa
Staphylococcus aureus phage phiP68 (bpphE) Viruses 22 22.7 % (5) 36.4 % (8) 9.1 % (2) 29.3 % 55 aa 755 aa
Bacillus phage PZA (bppz0) Viruses 27 33.3 % (9) 44.4 % (12) 11.1 % (3) 39.7 % 37 aa 854 aa
Bacteriophage 77 (bp770) Viruses 69 13.0 % (9) 31.9 % (22) 10.1 % (7) 33.5 % 33 aa 1509 aa
Bacteriophage A118 (bpa10) Viruses 72 12.5 % (9) 33.3 % (24) 13.9 % (10) 36.1 % 21 aa 1794 aa
Bacteriophage B1 (bpb10) Viruses 11 0.0 % (0) 9.1 % (1) 0.0 % (0) 36.8 % 65 aa 273 aa
Mycobacteriophage Barnyard (bpba0) Viruses 109 5.5 % (6) 15.6 % (17) 9.2 % (10) 57.3 % 44 aa 2047 aa
Bacteriophage bIL170 (bpbi0) Viruses 64 17.2 % (11) 25.0 % (16) 10.9 % (7) 34.3 % 33 aa 916 aa
Bacteriophage bIL285 (bpbi1) Viruses 62 12.9 % (8) 27.4 % (17) 9.7 % (6) 35.2 % 42 aa 894 aa
Bacteriophage bIL286 (bpbi2) Viruses 61 18.0 % (11) 31.1 % (19) 13.1 % (8) 35.3 % 32 aa 1640 aa
Bacteriophage bIL309 (bpbi3) Viruses 56 10.7 % (6) 32.1 % (18) 14.3 % (8) 35.7 % 40 aa 1441 aa
Bacteriophage bIL310 (bpbi4) Viruses 29 6.9 % (2) 24.1 % (7) 10.3 % (3) 35.9 % 28 aa 542 aa
Bacteriophage bIL311 (bpbi5) Viruses 22 18.2 % (4) 22.7 % (5) 9.1 % (2) 34.2 % 38 aa 489 aa
Bacteriophage bIL312 (bpbi6) Viruses 27 7.4 % (2) 25.9 % (7) 11.1 % (3) 33.0 % 46 aa 480 aa
Lactococcus phage BK5-T (bpbk0) Viruses 63 14.3 % (9) 28.6 % (18) 15.9 % (10) 35.0 % 42 aa 1904 aa
Mycobacteriophage Bxb1 (bpbx0) Viruses 86 12.8 % (11) 27.9 % (24) 12.8 % (11) 63.6 % 31 aa 823 aa
Mycobacteriophage Bxz2 (bpbx2) Viruses 86 12.8 % (11) 31.4 % (27) 14.0 % (12) 64.2 % 20 aa 1008 aa
Mycobacteriophage Che8 (bpch0) Viruses 112 6.2 % (7) 23.2 % (26) 8.9 % (10) 61.3 % 31 aa 1188 aa
Mycobacteriophage Che9c (bpch1) Viruses 84 3.6 % (3) 29.8 % (25) 16.7 % (14) 65.4 % 44 aa 1213 aa
Mycobacteriophage Che9d (bpch2) Viruses 111 6.3 % (7) 21.6 % (24) 7.2 % (8) 61.0 % 34 aa 1183 aa
Mycobacteriophage CJW1 (bpcj0) Viruses 141 10.6 % (15) 20.6 % (29) 7.1 % (10) 63.1 % 32 aa 1576 aa
Mycobacteriophage Corndog (bpco0) Viruses 122 4.9 % (6) 18.9 % (23) 13.1 % (16) 65.4 % 33 aa 1461 aa
Mycobacteriophage D29 (bpd20) Viruses 79 16.5 % (13) 34.2 % (27) 10.1 % (8) 63.5 % 28 aa 837 aa
Bacteriophage HK620 (bphk1) Viruses 58 17.2 % (10) 29.3 % (17) 8.6 % (5) 46.7 % 27 aa 722 aa
Listeria phage 2389 (bpl20) Viruses 57 15.8 % (9) 35.1 % (20) 12.3 % (7) 34.7 % 48 aa 1026 aa
Lactobacillus casei bacteriophage A2 (bplc0) Viruses 61 11.5 % (7) 39.3 % (24) 8.2 % (5) 44.9 % 59 aa 1621 aa
Lactobacillus johnsonii prophage Lj928 (bplj0) Viruses 50 10.0 % (5) 28.0 % (14) 12.0 % (6) 34.7 % 48 aa 1544 aa
Lactobacillus johnsonii prophage Lj965 (bplj1) Viruses 46 17.4 % (8) 37.0 % (17) 13.0 % (6) 35.1 % 49 aa 2021 aa
Mycobacteriophage Omega (bpom0) Viruses 237 10.1 % (24) 18.6 % (44) 9.3 % (22) 61.4 % 22 aa 1599 aa
Lactococcus phage P335 (bpp30) Viruses 49 16.3 % (8) 34.7 % (17) 10.2 % (5) 35.4 % 54 aa 1711 aa
Mycobacteriophage PG1 (bppg0) Viruses 100 9.0 % (9) 20.0 % (20) 10.0 % (10) 66.5 % 45 aa 1932 aa
Bacteriophage phi3626 (bpph5) Viruses 50 20.0 % (10) 42.0 % (21) 14.0 % (7) 28.4 % 39 aa 983 aa
Bacteriophage phi ETA (bpph7) Viruses 66 16.7 % (11) 33.3 % (22) 13.6 % (9) 35.4 % 48 aa 989 aa
Temperate phage PhiNIH1.1 (bpph8) Viruses 55 18.2 % (10) 36.4 % (20) 12.7 % (7) 38.6 % 49 aa 1086 aa
Staphylococcus aureus prophage phiPV83 (bpph9) Viruses 65 15.4 % (10) 41.5 % (27) 13.8 % (9) 33.5 % 46 aa 1313 aa
Staphylococcus aureus temperate phage phiSLT (bpphA) Viruses 62 25.8 % (16) 40.3 % (25) 14.5 % (9) 33.3 % 35 aa 1374 aa
Lactobacillus bacteriophage phi adh (bpphB) Viruses 63 15.9 % (10) 25.4 % (16) 12.7 % (8) 35.6 % 49 aa 1487 aa
Staphylococcus aureus phage phi 11 (bpphH) Viruses 53 17.0 % (9) 34.0 % (18) 9.4 % (5) 34.5 % 57 aa 910 aa
Staphylococcus aureus phage phi 12 (bpphI) Viruses 49 30.6 % (15) 49.0 % (24) 4.1 % (2) 33.3 % 54 aa 2066 aa
Staphylococcus aureus phage phi 13 (bpphJ) Viruses 49 16.3 % (8) 40.8 % (20) 18.4 % (9) 33.5 % 52 aa 1550 aa
Bacteriophage phi JL001 (bppj0) Viruses 90 10.0 % (9) 31.1 % (28) 11.1 % (10) 29 aa 1152 aa
Bacteriophage phiKO2 (bppk0) Viruses 64 15.6 % (10) 39.1 % (25) 9.4 % (6) 51.5 % 33 aa 3433 aa
Bacteriophage phi LC3 (bppl0) Viruses 51 15.7 % (8) 41.2 % (21) 9.8 % (5) 35.5 % 52 aa 843 aa
Methanobacterium phage psiM2 (bpps0) Viruses 31 3.2 % (1) 22.6 % (7) 6.5 % (2) 46.3 % 90 aa 1186 aa
Methanothermobacter wolfeii prophage psiM100 (bpps1) Viruses 37 10.8 % (4) 35.1 % (13) 10.8 % (4) 45.7 % 85 aa 1157 aa
Bacteriophage PY54 (bppy0) Viruses 67 11.9 % (8) 29.9 % (20) 9.0 % (6) 44.6 % 54 aa 1330 aa
Bacteriophage r1t (bpr10) Viruses 50 18.0 % (9) 36.0 % (18) 14.0 % (7) 35.5 % 54 aa 667 aa
Mycobacteriophage Rosebush (bpro0) Viruses 90 10.0 % (9) 28.9 % (26) 12.2 % (11) 69.0 % 37 aa 1882 aa
Staphylococcus aureus bacteriophage PVL (bpsa0) Viruses 62 21.0 % (13) 43.5 % (27) 17.7 % (11) 33.6 % 43 aa 759 aa
Streptococcus thermophilus bacteriophage Sfi11 (bpsf0) Viruses 25 20.0 % (5) 36.0 % (9) 12.0 % (3) 38.6 % 53 aa 1510 aa
Bacteriophage sk1 (bpsk0) Viruses 54 9.3 % (5) 18.5 % (10) 11.1 % (6) 34.5 % 39 aa 999 aa
Streptococcus mitis phage SM1 (bpsm0) Viruses 56 7.1 % (4) 32.1 % (18) 8.9 % (5) 42 aa 1062 aa
Bacteriophage SPBc2 (bpsp1) Viruses 185 17.8 % (33) 35.1 % (65) 15.1 % (28) 34.6 % 21 aa 2285 aa
Streptococcus pneumoniae bacteriophage MM1 (bpsp3) Viruses 53 18.9 % (10) 34.0 % (18) 11.3 % (6) 38.4 % 57 aa 1989 aa
Streptococcus thermophilus bacteriophage 7201 (bpst2) Viruses 46 19.6 % (9) 43.5 % (20) 10.9 % (5) 38.7 % 47 aa 1554 aa
Streptococcus thermophilus bacteriophage DT1 (bpst3) Viruses 47 10.6 % (5) 34.0 % (16) 4.3 % (2) 39.1 % 36 aa 1278 aa
Streptococcus thermophilus temperate bacteriophage O1205 (bpst4) Viruses 57 8.8 % (5) 31.6 % (18) 8.8 % (5) 38.3 % 42 aa 1517 aa
Streptococcus thermophilus bacteriophage Sfi19 (bpst5) Viruses 45 8.9 % (4) 40.0 % (18) 8.9 % (4) 38.3 % 40 aa 1626 aa
Streptococcus thermophilus bacteriophage Sfi21 (bpst6) Viruses 50 10.0 % (5) 32.0 % (16) 12.0 % (6) 37.6 % 48 aa 1560 aa
Mycobacteriophage TM4 (bptm0) Viruses 89 3.4 % (3) 19.1 % (17) 12.4 % (11) 68.1 % 29 aa 1229 aa
Lactococcus lactis bacteriophage TP901-1 (bptp0) Viruses 56 17.9 % (10) 35.7 % (20) 7.1 % (4) 35.4 % 47 aa 937 aa
Bacteriophage Tuc2009 (bptu0) Viruses 56 23.2 % (13) 35.7 % (20) 8.9 % (5) 36.2 % 32 aa 1025 aa
Lactococcus lactis bacteriophage ul36 (bpul0) Viruses 58 13.8 % (8) 29.3 % (17) 13.8 % (8) 35.8 % 50 aa 908 aa
Bacteriophage VT2-Sa (bpvt0) Viruses 82 14.6 % (12) 28.0 % (23) 13.4 % (11) 49.9 % 42 aa 2806 aa
Mycobacterium phage L5 (bpl50) Viruses 85 15.3 % (13) 34.1 % (29) 7.1 % (6) 62.3 % 37 aa 837 aa
Phage phi 4795 (bp470) Viruses 48 18.8 % (9) 22.9 % (11) 14.6 % (7) 50.6 % 25 aa 645 aa
Bacteriophage 933W (bp930) Viruses 80 16.2 % (13) 32.5 % (26) 12.5 % (10) 49.4 % 51 aa 2806 aa
Pseudomonas phage D3 (bpd30) Viruses 94 9.6 % (9) 26.6 % (25) 12.8 % (12) 57.8 % 32 aa 909 aa
Bacteriophage D3112 (bpd31) Viruses 55 9.1 % (5) 29.1 % (16) 10.9 % (6) 64.3 % 34 aa 735 aa
Enterobacteria phage HK022 (bphk0) Viruses 57 19.3 % (11) 38.6 % (22) 10.5 % (6) 49.5 % 50 aa 1183 aa
Bacteriophage HK97 (bphk2) Viruses 61 19.7 % (12) 34.4 % (21) 11.5 % (7) 49.8 % 32 aa 1296 aa
bacteriophage lambda (bpla0) Viruses 66 27.3 % (18) 54.5 % (36) 10.6 % (7) 49.9 % 28 aa 1132 aa
Bacteriophage N15 (bpn10) Viruses 60 18.3 % (11) 36.7 % (22) 6.7 % (4) 51.2 % 18 aa 1324 aa
Bacteriophage P27 (bpp22) Viruses 58 19.0 % (11) 39.7 % (23) 12.1 % (7) 49.4 % 51 aa 649 aa
Bacteriophage phi-105 (bpph3) Viruses 51 11.8 % (6) 39.2 % (20) 11.8 % (6) 42.7 % 56 aa 1018 aa
Bacteriophage phi-C31 (bpph4) Viruses 55 12.7 % (7) 36.4 % (20) 14.5 % (8) 63.6 % 41 aa 729 aa
Bacteriophage phiE125 (bpph6) Viruses 71 14.1 % (10) 35.2 % (25) 11.3 % (8) 61.2 % 43 aa 1354 aa
Bacteriophage phi-BT1 (bpphC) Viruses 55 12.7 % (7) 30.9 % (17) 16.4 % (9) 62.8 % 46 aa 808 aa
Bacteriophage phi1026b (bpphG) Viruses 83 12.0 % (10) 28.9 % (24) 12.0 % (10) 60.7 % 35 aa 1354 aa
Bacteriophage SPP1 (bpsp2) Viruses 106 10.4 % (11) 23.6 % (25) 23.6 % (25) 43.7 % 51 aa 846 aa
Stx2 converting bacteriophage I (bpst7) Viruses 166 7.8 % (13) 18.1 % (30) 17.5 % (29) 49.4 % 33 aa 2806 aa
Stx1 converting bacteriophage (bpst8) Viruses 167 7.2 % (12) 15.6 % (26) 16.8 % (28) 49.7 % 42 aa 2806 aa
Stx2 converting bacteriophage II (bpst9) Viruses 170 7.6 % (13) 15.9 % (27) 18.2 % (31) 49.9 % 41 aa 2576 aa
Bacteriophage VWB (bpvw0) Viruses 61 6.6 % (4) 16.4 % (10) 9.8 % (6) 71.1 % 51 aa 1440 aa
Enterobacteria phage T1 (bpt10) Viruses 78 11.5 % (9) 28.2 % (22) 12.8 % (10) 45.6 % 36 aa 1172 aa
Enterobacteria phage BF23 (bpbf0) Viruses 8 25.0 % (2) 50.0 % (4) 12.5 % (1) 38.5 % 75 aa 595 aa
Bacteriophage T5 (bpt50) Viruses 162 17.3 % (28) 38.9 % (63) 15.4 % (25) 39.3 % 27 aa 1396 aa
Lactococcus phage c2 (bpc20) Viruses 39 2.6 % (1) 23.1 % (9) 15.4 % (6) 36.3 % 22 aa 706 aa
Burkholderia cepacia complex phage BcepC6B (bpbc6) Viruses 46 21.7 % (10) 26.1 % (12) 13.0 % (6) 65.2 % 49 aa 888 aa
Burkholderia cepacia phage BcepNazgul (bpbc7) Viruses 75 5.3 % (4) 24.0 % (18) 12.0 % (9) 31 aa 1270 aa
Bacteriophage Felix 01 (bpfe0) Viruses 247 9.3 % (23) 20.2 % (50) 17.0 % (42) 37 aa 909 aa
Mycoplasma arthritidis bacteriophage MAV1 (bpma0) Viruses 15 13.3 % (2) 66.7 % (10) 13.3 % (2) 91 aa 766 aa
Sinorhizobium meliloti phage PBC5 (bppb0) Viruses 83 7.2 % (6) 26.5 % (22) 12.0 % (10) 80 aa 2849 aa
Listonella pelagia phage phiHSIC (bpphK) Viruses 47 10.6 % (5) 21.3 % (10) 10.6 % (5) 49 aa 1069 aa
Xanthomonas oryzae bacteriophage Xp10 (bpxp0) Viruses 60 20.0 % (12) 36.7 % (22) 10.0 % (6) 50 aa 1574 aa
Alteromonas phage PM2 (bppm0) Viruses 22 13.6 % (3) 22.7 % (5) 31.8 % (7) 42.2 % 30 aa 634 aa
Acanthamoeba polyphaga mimivirus (bpmi0) Viruses 911 30.3 % (276) 60.6 % (552) 12.7 % (116) 81 aa 2959 aa
Paramecium bursaria Chlorella virus 1 (bprb2) Viruses 689 13.1 % (90) 23.8 % (164) 28.3 % (195) 65 aa 1369 aa
Emiliania huxleyi virus 86 (bpeh0) Viruses 472 13.8 % (65) 30.1 % (142) 38.3 % (181) 20 aa 2873 aa
Ectocarpus siliculosus virus 1 (bpes1) Viruses 231 19.0 % (44) 44.6 % (103) 19.0 % (44) 53 aa 1233 aa
Enterobacteria phage PRD1 (bppr0) Viruses 22 36.4 % (8) 45.5 % (10) 36.4 % (8) 48.1 % 42 aa 591 aa

Ratio of ORFs, whose 3D-structures are predicted

DATE Dec 21 2006 
BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf




ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.





Aeropyrum pernix K1 (aper0)
Archaea
2694
27.4 %
(737)
29.2 % 
(786)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Aeropyrum pernix K1 (aper1)
Archaea
1841
40.8 %
(751)
43.5 % 
(800)
24.2 % 
(446)
56.3 %
50 aa 
1933 aa 





Sulfolobus acidocaldarius DSM 639 (saci0)
Archaea
2223
48.6 %
(1081)
57.9 % 
(1287)
22.0 % 
(489)
36.7 %
32 aa 
1452 aa 





Sulfolobus solfataricus P2 (ssol0)
Archaea
2994
42.6 %
(1275)
52.8 % 
(1580)
23.8 % 
(712)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii str. 7 (stok0)
Archaea
2826
41.4 %
(1170)
51.3 % 
(1449)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum str. IM2 (paer1)
Archaea
2605
37.6 %
(980)
46.6 % 
(1214)
25.9 % 
(674)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus DSM 4304 (aful0)
Archaea
2407
50.2 %
(1209)
60.8 % 
(1463)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Haloarcula marismortui ATCC 43049 (hmar0)
Archaea
4240
40.2 %
(1704)
43.7 % 
(1852)
24.2 % 
(1028)
61.1 %
30 aa 
2306 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
41.2 %
(1072)
45.3 % 
(1180)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Haloquadratum walsbyi DSM 16790 (hwal0)
Archaea
2646
42.7 %
(1130)
52.0 % 
(1376)
21.2 % 
(561)
47.9 %
17 aa 
9159 aa 





Natronomonas pharaonis DSM 2160 (npha0)
Archaea
2822
44.9 %
(1267)
47.3 % 
(1334)
23.0 % 
(649)
63.1 %
29 aa 
1999 aa 





Methanosphaera stadtmanae DSM 3091 (msta0)
Archaea
1534
52.5 %
(806)
56.3 % 
(864)
21.6 % 
(332)
27.6 %
37 aa 
3356 aa 





Methanothermobacter thermautotrophicus str. Delta H (mthe0)
Archaea
1869
49.9 %
(932)
55.4 % 
(1035)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanocaldococcus jannaschii DSM 2661 (mjan0)
Archaea
1770
49.2 %
(871)
53.6 % 
(949)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanococcus maripaludis S2 (mmar0)
Archaea
1722
53.5 %
(921)
63.4 % 
(1092)
23.4 % 
(403)
33.1 %
32 aa 
2076 aa 





Methanospirillum hungatei JF-1 (mhun0)
Archaea
3139
48.1 %
(1510)
51.8 % 
(1627)
26.7 % 
(837)
45.1 %
41 aa 
2353 aa 





Methanococcoides burtonii DSM 6242 (mbur0)
Archaea
2273
49.6 %
(1127)
59.9 % 
(1362)
26.4 % 
(600)
40.8 %
45 aa 
2552 aa 





Methanosarcina acetivorans C2A (mace0)
Archaea
4544
41.7 %
(1896)
54.7 % 
(2486)
27.7 % 
(1260)
42.7 %
41 aa 
4226 aa 





Methanosarcina barkeri str. fusaro (mbar0)
Archaea
3625
46.8 %
(1698)
59.6 % 
(2161)
28.8 % 
(1043)
39.2 %
31 aa 
2272 aa 





Methanosarcina mazei Goe1 (mmaz0)
Archaea
3371
44.8 %
(1510)
58.3 % 
(1966)
24.1 % 
(812)
41.5 %
16 aa 
1898 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
44.3 %
(747)
48.1 % 
(811)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Pyrococcus abyssi Orsay (paby0)
Archaea
1784
54.5 %
(972)
64.0 % 
(1141)
24.7 % 
(441)
44.7 %
18 aa 
2122 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
51.0 %
(1054)
59.4 % 
(1227)
24.8 % 
(513)
40.8 %
21 aa 
1740 aa 





Pyrococcus horikoshii OT3 (phor0)
Archaea
2061
43.9 %
(904)
47.6 % 
(981)
28.0 % 
(578)
41.9 %
50 aa 
4436 aa 





Thermococcus kodakarensis KOD1 (tkod0)
Archaea
2306
45.7 %
(1053)
54.3 % 
(1253)
27.0 % 
(622)
52.0 %
33 aa 
1798 aa 





Picrophilus torridus DSM 9790 (ptor0)
Archaea
1535
53.9 %
(828)
58.2 % 
(894)
24.0 % 
(368)
36.0 %
24 aa 
1667 aa 





Thermoplasma acidophilum DSM1728 (taci0)
Archaea
1478
54.5 %
(805)
63.9 % 
(945)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium GSS1 (tvol0)
Archaea
1526
53.4 %
(815)
62.5 % 
(953)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Nanoarchaeum equitans Kin4-M (nequ0)
Archaea
536
47.9 %
(257)
51.1 % 
(274)
25.7 % 
(138)
31.6 %
54 aa 
2197 aa 





Acidobacteria bacterium Ellin345 (abac0)
Bacteria
4777
47.7 %
(2277)
59.6 % 
(2845)
32.9 % 
(1571)
58.4 %
41 aa 
3121 aa 





Corynebacterium diphtheriae NCTC 13129 (cdip0)
Bacteria
2272
49.6 %
(1128)
57.7 % 
(1310)
26.2 % 
(596)
53.5 %
31 aa 
2977 aa 





Corynebacterium efficiens YS-314 (ceff0)
Bacteria
2998
46.5 %
(1393)
51.4 % 
(1541)
25.2 % 
(754)
63.0 %
33 aa 
3022 aa 





Corynebacterium glutamicum ATCC 13032 (cglu0)
Bacteria
3099
46.8 %
(1450)
51.1 % 
(1583)
25.6 % 
(793)
53.8 %
33 aa 
2993 aa 





Corynebacterium glutamicum ATCC 13032 (cglu1)
Bacteria
3057
47.6 %
(1454)
51.9 % 
(1586)
26.3 % 
(803)
53.8 %
22 aa 
2996 aa 





Corynebacterium jeikeium K411 (cjei0)
Bacteria
2120
52.1 %
(1105)
56.7 % 
(1202)
25.0 % 
(531)
61.4 %
24 aa 
3618 aa 





Mycobacterium leprae TN (mlep0)
Bacteria
1605
56.7 %
(910)
60.6 % 
(972)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium sp. MCS (myco0)
Bacteria
5615
50.8 %
(2853)
63.2 % 
(3549)
22.1 % 
(1243)
68.4 %
32 aa 
3693 aa 





Mycobacterium avium subsp. paratuberculosis K-10 (mavi0)
Bacteria
4350
52.9 %
(2300)
65.7 % 
(2859)
21.9 % 
(952)
69.3 %
37 aa 
6384 aa 





Mycobacterium bovis AF2122/97 (mbov0)
Bacteria
3920
48.7 %
(1910)
61.4 % 
(2405)
22.0 % 
(861)
65.6 %
26 aa 
4151 aa 





Mycobacterium tuberculosis H37Rv (mtub0)
Bacteria
3991
48.2 %
(1923)
52.9 % 
(2112)
21.9 % 
(874)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4189
45.1 %
(1890)
49.2 % 
(2059)
21.3 % 
(892)
65.6 %
30 aa 
4151 aa 





Nocardia farcinica IFM 10152 (nfar0)
Bacteria
5936
45.0 %
(2671)
48.7 % 
(2891)
21.9 % 
(1302)
70.7 %
34 aa 
14474 aa 





Rhodococcus sp. RHA1 (rhod0)
Bacteria
9145
47.4 %
(4331)
52.7 % 
(4817)
19.8 % 
(1807)
67.0 %
24 aa 
11258 aa 





Frankia alni ACN14a (faln0)
Bacteria
6711
42.0 %
(2817)
46.1 % 
(3091)
19.2 % 
(1290)
72.8 %
20 aa 
7085 aa 





Frankia sp. CcI3 (fran0)
Bacteria
4499
42.1 %
(1892)
47.2 % 
(2122)
21.0 % 
(944)
70.1 %
32 aa 
4606 aa 





Tropheryma whipplei TW08/27 (twhi0)
Bacteria
783
63.0 %
(493)
68.3 % 
(535)
30.5 % 
(239)
46.3 %
29 aa 
2308 aa 





Tropheryma whipplei str. Twist (twhi1)
Bacteria
808
61.1 %
(494)
64.4 % 
(520)
32.1 % 
(259)
46.3 %
39 aa 
2312 aa 





Leifsonia xyli subsp. xyli str. CTCB07 (lxyl0)
Bacteria
2030
49.1 %
(997)
60.0 % 
(1219)
24.9 % 
(506)
67.7 %
20 aa 
1980 aa 





Propionibacterium acnes KPA171202 (pacn0)
Bacteria
2297
52.5 %
(1205)
62.4 % 
(1434)
26.2 % 
(601)
60.0 %
33 aa 
2117 aa 





Streptomyces avermitilis MA-4680 (save0)
Bacteria
7673
45.0 %
(3456)
49.5 % 
(3799)
22.9 % 
(1759)
70.7 %
33 aa 
7746 aa 





Streptomyces coelicolor A3(2) (scoe0)
Bacteria
8154
44.0 %
(3588)
47.8 % 
(3897)
22.6 % 
(1843)
72.0 %
19 aa 
7463 aa 





Thermobifida fusca YX (tfus0)
Bacteria
3110
51.1 %
(1590)
61.8 % 
(1922)
25.8 % 
(803)
67.5 %
32 aa 
3629 aa 





Bifidobacterium longum NCC2705 (blon0)
Bacteria
1729
55.2 %
(954)
58.9 % 
(1019)
25.0 % 
(432)
60.1 %
15 aa 
3172 aa 





Rubrobacter xylanophilus DSM 9941 (rxyl0)
Bacteria
3140
56.5 %
(1775)
67.3 % 
(2114)
24.8 % 
(779)
70.5 %
44 aa 
1618 aa 





Symbiobacterium thermophilum IAM14863 (symb0)
Bacteria
3337
49.6 %
(1656)
60.5 % 
(2020)
27.9 % 
(932)
68.7 %
30 aa 
2244 aa 





Aquifex aeolicus VF5 (aaeo0)
Bacteria
1553
61.8 %
(960)
71.3 % 
(1107)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Bacteroides fragilis YCH46 (bfra0)
Bacteria
4625
38.9 %
(1797)
46.0 % 
(2127)
31.2 % 
(1445)
43.2 %
38 aa 
1957 aa 





Bacteroides fragilis NCTC 9343 (bfra1)
Bacteria
4236
41.7 %
(1766)
49.3 % 
(2089)
32.2 % 
(1365)
43.1 %
30 aa 
1957 aa 





Bacteroides thetaiotaomicron VPI-5482 (bthe0)
Bacteria
4816
42.1 %
(2028)
59.7 % 
(2875)
32.4 % 
(1561)
42.9 %
32 aa 
2183 aa 





Porphyromonas gingivalis W83 (pgin0)
Bacteria
1909
45.4 %
(867)
58.7 % 
(1121)
27.0 % 
(516)
48.3 %
30 aa 
2316 aa 





Salinibacter ruber DSM 13855 (srub0)
Bacteria
2833
52.0 %
(1473)
62.7 % 
(1775)
27.3 % 
(772)
66.1 %
30 aa 
2597 aa 





Cytophaga hutchinsonii ATCC 33406 (chut0)
Bacteria
3785
43.0 %
(1629)
47.5 % 
(1799)
33.4 % 
(1266)
38.8 %
49 aa 
5453 aa 





Chlamydia muridarum Nigg (cmur0)
Bacteria
911
52.1 %
(475)
58.9 % 
(537)
27.1 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis D/UW-3/CX (ctra0)
Bacteria
894
53.4 %
(477)
56.9 % 
(509)
27.2 % 
(243)
41.3 %
45 aa 
1786 aa 





Chlamydia trachomatis A/HAR-13 (ctra1)
Bacteria
919
52.4 %
(482)
55.9 % 
(514)
27.4 % 
(252)
41.3 %
45 aa 
1786 aa 





Chlamydophila abortus S26/3 (cabo0)
Bacteria
932
52.3 %
(487)
61.6 % 
(574)
30.7 % 
(286)
39.9 %
39 aa 
1806 aa 





Chlamydophila caviae GPIC (ccav0)
Bacteria
1005
49.4 %
(496)
58.3 % 
(586)
30.5 % 
(307)
39.2 %
30 aa 
3346 aa 





Chlamydophila felis Fe/C-56 (cfel0)
Bacteria
1013
49.9 %
(505)
54.4 % 
(551)
28.5 % 
(289)
39.3 %
40 aa 
3298 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1116
43.5 %
(485)
47.5 % 
(530)
31.4 % 
(350)
40.6 %
30 aa 
1826 aa 





Chlamydophila pneumoniae CWL029 (cpne1)
Bacteria
1052
46.1 %
(485)
50.3 % 
(529)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
45.6 %
(487)
50.0 % 
(535)
31.2 % 
(333)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae TW-183 (cpne3)
Bacteria
1113
44.0 %
(490)
48.2 % 
(536)
30.6 % 
(341)
40.6 %
33 aa 
1826 aa 





Parachlamydia sp. UWE25 (para0)
Bacteria
2031
42.3 %
(859)
50.6 % 
(1028)
25.9 % 
(526)
34.7 %
45 aa 
3181 aa 





Chlorobium tepidum TLS (ctep0)
Bacteria
2255
49.8 %
(1123)
55.4 % 
(1249)
21.5 % 
(485)
56.5 %
30 aa 
1538 aa 





Chlorobium chlorochromatii CaD3 (cchl0)
Bacteria
2002
51.4 %
(1029)
64.0 % 
(1281)
18.8 % 
(376)
44.3 %
31 aa 
36805 aa 





Pelodictyon luteolum DSM 273 (plut0)
Bacteria
2083
55.6 %
(1158)
61.4 % 
(1280)
24.2 % 
(504)
57.3 %
48 aa 
7284 aa 





Dehalococcoides sp. CBDB1 (deha0)
Bacteria
1458
55.9 %
(815)
59.3 % 
(865)
23.6 % 
(344)
47.0 %
27 aa 
1434 aa 





Dehalococcoides ethenogenes 195 (deth0)
Bacteria
1580
52.9 %
(836)
57.1 % 
(902)
22.8 % 
(361)
48.9 %
30 aa 
1834 aa 





Synechococcus sp. JA-3-3Ab (cyel0)
Bacteria
2760
47.5 %
(1311)
51.8 % 
(1429)
23.9 % 
(661)
60.2 %
27 aa 
2413 aa 





Synechococcus sp. JA-2-3B'a(2-13) (cyel1)
Bacteria
2862
46.5 %
(1332)
56.5 % 
(1618)
24.1 % 
(689)
58.5 %
30 aa 
2505 aa 





Synechococcus elongatus PCC 6301 (selo0)
Bacteria
2525
52.7 %
(1330)
57.8 % 
(1459)
25.0 % 
(630)
55.5 %
15 aa 
1568 aa 





Synechococcus elongatus PCC 7942 (selo1)
Bacteria
2728
50.3 %
(1371)
55.2 % 
(1506)
25.2 % 
(687)
55.4 %
29 aa 
1807 aa 





Synechococcus sp. WH 8102 (syne1)
Bacteria
2517
45.6 %
(1147)
57.2 % 
(1439)
21.6 % 
(543)
59.4 %
31 aa 
10791 aa 





Synechococcus sp. CC9902 (syne2)
Bacteria
2304
47.7 %
(1100)
58.2 % 
(1341)
23.4 % 
(538)
59.2 %
25 aa 
3504 aa 





Synechococcus sp. CC9605 (syne3)
Bacteria
2638
42.7 %
(1127)
53.0 % 
(1397)
22.6 % 
(597)
54.2 %
32 aa 
1533 aa 





Synechocystis sp. PCC 6803 (syne0)
Bacteria
3569
46.2 %
(1648)
58.7 % 
(2094)
25.2 % 
(901)
47.4 %
29 aa 
4199 aa 





Thermosynechococcus elongatus BP-1 (telo0)
Bacteria
2475
50.8 %
(1257)
63.2 % 
(1564)
26.5 % 
(656)
53.9 %
29 aa 
1706 aa 





Gloeobacter violaceus PCC 7421 (gvio0)
Bacteria
4430
45.7 %
(2023)
51.6 % 
(2287)
24.1 % 
(1066)
62.0 %
28 aa 
3277 aa 





Anabaena variabilis ATCC 29413 (anab1)
Bacteria
5657
45.7 %
(2584)
50.8 % 
(2872)
25.5 % 
(1440)
41.4 %
28 aa 
6581 aa 





Anabaena sp. PCC 7120 (anab0)
Bacteria
6132
42.3 %
(2591)
52.3 % 
(3210)
25.6 % 
(1567)
41.3 %
17 aa 
4936 aa 





Trichodesmium erythraeum IMS101 (tery0)
Bacteria
4451
43.7 %
(1946)
55.9 % 
(2489)
22.9 % 
(1018)
34.1 %
28 aa 
9867 aa 





Prochlorococcus marinus subsp. pastoris str. CCMP1986 (pmar0)
Bacteria
1712
53.1 %
(909)
57.5 % 
(984)
25.9 % 
(444)
30.8 %
32 aa 
1521 aa 





Prochlorococcus marinus str. MIT 9313 (pmar1)
Bacteria
2265
46.6 %
(1056)
51.5 % 
(1166)
24.6 % 
(558)
50.7 %
33 aa 
1765 aa 





Prochlorococcus marinus subsp. marinus str. CCMP1375 (pmar2)
Bacteria
1882
49.0 %
(923)
53.6 % 
(1008)
25.4 % 
(478)
36.4 %
30 aa 
1524 aa 





Prochlorococcus marinus str. NATL2A (pmar3)
Bacteria
1890
48.9 %
(925)
53.7 % 
(1015)
26.1 % 
(494)
35.1 %
30 aa 
1821 aa 





Prochlorococcus marinus str. MIT 9312 (pmar4)
Bacteria
1809
51.0 %
(922)
55.2 % 
(998)
25.4 % 
(460)
31.2 %
32 aa 
1468 aa 





Deinococcus geothermalis DSM 11300 (dgeo0)
Bacteria
2857
54.4 %
(1553)
58.4 % 
(1668)
22.1 % 
(632)
66.5 %
30 aa 
3243 aa 





Deinococcus radiodurans R1 (drad0)
Bacteria
3101
48.6 %
(1507)
59.4 % 
(1841)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Thermus thermophilus HB27 (tthe0)
Bacteria
2210
56.3 %
(1245)
65.7 % 
(1453)
23.5 % 
(519)
69.4 %
27 aa 
2672 aa 





Thermus thermophilus HB8 (tthe1)
Bacteria
2238
56.3 %
(1260)
65.4 % 
(1464)
22.8 % 
(511)
69.5 %
11 aa 
2672 aa 





Bacillus clausii KSM-K16 (bcla0)
Bacteria
4087
54.8 %
(2239)
59.8 % 
(2445)
27.9 % 
(1139)
44.8 %
26 aa 
2870 aa 





Bacillus halodurans C-125 (bhal0)
Bacteria
4066
51.6 %
(2098)
56.0 % 
(2275)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus licheniformis DSM 13 (blic0)
Bacteria
4196
52.7 %
(2210)
56.8 % 
(2385)
29.4 % 
(1234)
46.2 %
24 aa 
3588 aa 





Bacillus licheniformis ATCC 14580 (blic1)
Bacteria
4152
52.4 %
(2177)
56.5 % 
(2347)
29.5 % 
(1223)
46.2 %
26 aa 
3588 aa 





Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Bacteria
4106
52.5 %
(2155)
60.9 % 
(2500)
29.3 % 
(1202)
43.5 %
20 aa 
5488 aa 





Bacillus anthracis str. Ames (bant0)
Bacteria
5311
45.4 %
(2413)
50.0 % 
(2653)
31.4 % 
(1666)
35.4 %
28 aa 
5017 aa 





Bacillus anthracis str. Ames (bant1)
Bacteria
5617
43.6 %
(2450)
47.1 % 
(2643)
31.3 % 
(1759)
35.2 %
28 aa 
5017 aa 





Bacillus anthracis str. Sterne (bant2)
Bacteria
5513
47.1 %
(2595)
50.8 % 
(2798)
31.8 % 
(1752)
35.4 %
35 aa 
5017 aa 





Bacillus cereus ATCC 14579 (bcer0)
Bacteria
5255
47.2 %
(2479)
50.6 % 
(2661)
30.2 % 
(1586)
35.3 %
18 aa 
5017 aa 





Bacillus cereus ATCC 10987 (bcer1)
Bacteria
5844
44.1 %
(2578)
52.0 % 
(3041)
31.3 % 
(1829)
35.5 %
30 aa 
3242 aa 





Bacillus cereus E33L (bcer2)
Bacteria
5641
47.3 %
(2666)
51.5 % 
(2906)
31.8 % 
(1796)
35.1 %
44 aa 
5017 aa 





Bacillus thuringiensis serovar konkukian str. 97-27 (bthu0)
Bacteria
5197
48.3 %
(2511)
56.7 % 
(2948)
32.1 % 
(1667)
35.4 %
48 aa 
5017 aa 





Geobacillus kaustophilus HTA426 (gkau0)
Bacteria
3540
49.8 %
(1763)
54.6 % 
(1934)
25.8 % 
(912)
52.0 %
23 aa 
2301 aa 





Oceanobacillus iheyensis HTE831 (oihe0)
Bacteria
3496
54.1 %
(1892)
58.4 % 
(2040)
32.2 % 
(1127)
35.7 %
24 aa 
2373 aa 





Listeria innocua (linn0)
Bacteria
3043
54.2 %
(1650)
63.6 % 
(1934)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes Clip11262 (lmon0)
Bacteria
2846
58.4 %
(1662)
67.6 % 
(1924)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Listeria monocytogenes str. 4b F2365 (lmon1)
Bacteria
2821
57.2 %
(1614)
66.6 % 
(1879)
29.1 % 
(820)
38.0 %
28 aa 
2195 aa 





Staphylococcus aureus subsp. aureus Mu50 (saur0)
Bacteria
2733
53.2 %
(1454)
57.0 % 
(1557)
27.6 % 
(754)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus subsp. aureus N315 (saur1)
Bacteria
2624
55.7 %
(1461)
59.4 % 
(1559)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus subsp. aureus MW2 (saur2)
Bacteria
2659
53.7 %
(1427)
61.6 % 
(1638)
28.4 % 
(756)
32.8 %
18 aa 
9904 aa 





Staphylococcus aureus subsp. aureus MRSA252 (saur3)
Bacteria
2656
53.5 %
(1421)
62.2 % 
(1651)
27.7 % 
(737)
32.8 %
16 aa 
10746 aa 





Staphylococcus aureus subsp. aureus MSSA476 (saur4)
Bacteria
2598
54.3 %
(1410)
62.0 % 
(1612)
28.5 % 
(741)
32.8 %
16 aa 
2391 aa 





Staphylococcus aureus subsp. aureus COL (saur5)
Bacteria
2676
52.2 %
(1397)
59.9 % 
(1604)
27.0 % 
(723)
32.8 %
21 aa 
10498 aa 





Staphylococcus aureus RF122 (saur6)
Bacteria
2515
53.9 %
(1355)
62.1 % 
(1563)
28.2 % 
(710)
32.8 %
34 aa 
2396 aa 





Staphylococcus aureus subsp. aureus NCTC 8325 (saur7)
Bacteria
2892
48.9 %
(1415)
56.2 % 
(1624)
27.0 % 
(780)
32.9 %
29 aa 
9535 aa 





Staphylococcus aureus subsp. aureus USA300 (saur8)
Bacteria
2604
55.4 %
(1443)
59.6 % 
(1551)
26.6 % 
(692)
32.7 %
30 aa 
10421 aa 





Staphylococcus epidermidis ATCC 12228 (sepi0)
Bacteria
2485
51.5 %
(1281)
56.9 % 
(1413)
26.8 % 
(666)
32.0 %
25 aa 
9439 aa 





Staphylococcus epidermidis RP62A (sepi1)
Bacteria
2526
51.0 %
(1289)
59.7 % 
(1509)
25.9 % 
(655)
32.1 %
19 aa 
10203 aa 





Staphylococcus haemolyticus JCSC1435 (shae0)
Bacteria
2694
50.1 %
(1351)
55.0 % 
(1481)
28.0 % 
(754)
32.8 %
11 aa 
4354 aa 





Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 (ssap0)
Bacteria
2514
55.6 %
(1399)
65.3 % 
(1641)
28.2 % 
(708)
33.2 %
17 aa 
2316 aa 





Clostridium acetobutylicum ATCC 824 (cace0)
Bacteria
3848
52.2 %
(2009)
61.6 % 
(2372)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium difficile 630 (cdif0)
Bacteria
3753
53.1 %
(1991)
62.1 % 
(2331)
27.3 % 
(1025)
29.1 %
6 aa 
3011 aa 





Clostridium perfringens str. 13 (cper0)
Bacteria
2723
53.4 %
(1455)
57.6 % 
(1568)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Clostridium perfringens ATCC 13124 (cper1)
Bacteria
2876
51.5 %
(1480)
54.9 % 
(1580)
30.8 % 
(886)
28.4 %
30 aa 
2638 aa 





Clostridium perfringens SM101 (cper2)
Bacteria
2631
50.8 %
(1336)
55.3 % 
(1455)
28.9 % 
(761)
28.2 %
30 aa 
2095 aa 





Clostridium tetani E88 (ctet0)
Bacteria
2432
53.7 %
(1305)
57.6 % 
(1400)
30.3 % 
(738)
28.6 %
71 aa 
2838 aa 





Carboxydothermus hydrogenoformans Z-2901 (chyd0)
Bacteria
2620
50.0 %
(1309)
54.7 % 
(1432)
24.3 % 
(637)
42.0 %
28 aa 
1407 aa 





Desulfitobacterium hafniense Y51 (dhaf0)
Bacteria
5060
51.7 %
(2618)
58.0 % 
(2933)
28.1 % 
(1422)
47.4 %
35 aa 
3013 aa 





Moorella thermoacetica ATCC 39073 (mthe1)
Bacteria
2465
53.8 %
(1327)
59.4 % 
(1463)
24.3 % 
(600)
55.8 %
37 aa 
1487 aa 





Thermoanaerobacter tengcongensis MB4 (tten0)
Bacteria
2588
54.1 %
(1399)
63.1 % 
(1632)
27.6 % 
(715)
37.6 %
37 aa 
2862 aa 





Enterococcus faecalis V583 (efae0)
Bacteria
3265
46.3 %
(1511)
49.9 % 
(1630)
27.7 % 
(906)
37.4 %
22 aa 
3173 aa 





Lactobacillus acidophilus NCFM (laci0)
Bacteria
1864
54.9 %
(1023)
65.9 % 
(1228)
27.5 % 
(513)
34.7 %
27 aa 
4326 aa 





Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (lbul0)
Bacteria
1562
54.5 %
(852)
62.0 % 
(968)
26.0 % 
(406)
49.7 %
16 aa 
1946 aa 





Lactobacillus johnsonii NCC 533 (ljoh0)
Bacteria
1821
54.1 %
(985)
63.7 % 
(1160)
29.0 % 
(529)
34.6 %
38 aa 
4734 aa 





Lactobacillus plantarum WCFS1 (lpla0)
Bacteria
3059
52.4 %
(1602)
61.7 % 
(1887)
27.9 % 
(854)
44.4 %
24 aa 
5289 aa 





Lactobacillus sakei subsp. sakei 23K (lsak0)
Bacteria
1885
55.2 %
(1040)
63.2 % 
(1191)
28.8 % 
(542)
41.3 %
7 aa 
1987 aa 





Lactobacillus salivarius subsp. salivarius UCC118 (lsal0)
Bacteria
2017
50.9 %
(1026)
59.9 % 
(1209)
25.4 % 
(512)
33.0 %
35 aa 
1444 aa 





Lactococcus lactis subsp. lactis Il1403 (llac0)
Bacteria
2266
53.3 %
(1208)
62.5 % 
(1416)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus agalactiae 2603V/R (saga0)
Bacteria
2124
52.2 %
(1109)
62.2 % 
(1321)
26.8 % 
(570)
35.6 %
23 aa 
2274 aa 





Streptococcus agalactiae NEM316 (saga1)
Bacteria
2094
54.0 %
(1131)
63.2 % 
(1323)
28.8 % 
(603)
35.6 %
30 aa 
2066 aa 





Streptococcus agalactiae A909 (saga2)
Bacteria
1996
55.7 %
(1112)
64.8 % 
(1294)
26.8 % 
(535)
35.6 %
31 aa 
1774 aa 





Streptococcus mutans UA159 (smut0)
Bacteria
1960
55.9 %
(1095)
60.3 % 
(1181)
27.3 % 
(535)
36.8 %
25 aa 
2724 aa 





Streptococcus pneumoniae TIGR4 (spne0)
Bacteria
2125
52.0 %
(1105)
60.9 % 
(1294)
25.0 % 
(532)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae R6 (spne1)
Bacteria
2043
54.4 %
(1112)
63.9 % 
(1305)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes M1 GAS (spyo0)
Bacteria
1696
54.6 %
(926)
60.7 % 
(1030)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
52.1 %
(962)
57.2 % 
(1056)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Streptococcus pyogenes MGAS315 (spyo2)
Bacteria
1865
51.2 %
(954)
56.2 % 
(1049)
23.0 % 
(429)
38.6 %
38 aa 
1622 aa 





Streptococcus pyogenes SSI-1 (spyo3)
Bacteria
1861
50.8 %
(945)
55.5 % 
(1033)
22.9 % 
(426)
38.6 %
27 aa 
1623 aa 





Streptococcus pyogenes MGAS10394 (spyo4)
Bacteria
1886
50.9 %
(960)
58.7 % 
(1107)
23.8 % 
(448)
38.7 %
30 aa 
1648 aa 





Streptococcus pyogenes MGAS5005 (spyo5)
Bacteria
1865
51.4 %
(959)
61.3 % 
(1144)
24.4 % 
(455)
38.5 %
33 aa 
2059 aa 





Streptococcus pyogenes MGAS6180 (spyo6)
Bacteria
1894
50.8 %
(963)
61.2 % 
(1159)
25.4 % 
(481)
38.4 %
35 aa 
2106 aa 





Streptococcus pyogenes MGAS10270 (spyo7)
Bacteria
1987
49.1 %
(975)
59.9 % 
(1191)
24.1 % 
(478)
38.4 %
31 aa 
1715 aa 





Streptococcus pyogenes MGAS10750 (spyo8)
Bacteria
1979
49.7 %
(984)
60.8 % 
(1204)
23.6 % 
(467)
38.3 %
30 aa 
2547 aa 





Streptococcus pyogenes MGAS2096 (spyo9)
Bacteria
1898
51.8 %
(984)
63.0 % 
(1195)
24.4 % 
(464)
38.7 %
31 aa 
2416 aa 





Streptococcus pyogenes MGAS9429 (spyoA)
Bacteria
1877
50.5 %
(947)
60.9 % 
(1143)
24.5 % 
(460)
38.5 %
21 aa 
1755 aa 





Streptococcus thermophilus CNRZ1066 (sthe0)
Bacteria
1915
52.6 %
(1008)
62.9 % 
(1205)
24.1 % 
(462)
39.1 %
20 aa 
1464 aa 





Streptococcus thermophilus LMG 18311 (sthe1)
Bacteria
1889
52.7 %
(995)
62.8 % 
(1187)
24.7 % 
(466)
39.1 %
30 aa 
1470 aa 





Aster yellows witches'-broom phytoplasma AYWB (ayel0)
Bacteria
693
48.5 %
(336)
54.1 % 
(375)
29.1 % 
(202)
26.8 %  
38 aa 
1572 aa 





Onion yellows phytoplasma OY-M (past0)
Bacteria
754
54.8 %
(413)
62.2 % 
(469)
28.2 % 
(213)
27.7 %
33 aa 
1571 aa 





Mesoplasma florum L1 (mflo0)
Bacteria
683
61.1 %
(417)
64.7 % 
(442)
24.5 % 
(167)
27.0 %
37 aa 
1814 aa 





Mycoplasma capricolum subsp. capricolum ATCC 27343 (mcap1)
Bacteria
812
51.6 %
(419)
60.5 % 
(491)
25.1 % 
(204)
23.8 %
33 aa 
1965 aa 





Mycoplasma gallisepticum R (mgal0)
Bacteria
726
54.0 %
(392)
61.4 % 
(446)
25.1 % 
(182)
31.5 %
37 aa 
1976 aa 





Mycoplasma genitalium G-37 (mgen0)
Bacteria
476
64.3 %
(306)
69.1 % 
(329)
22.7 % 
(108)
31.7 %
37 aa 
1805 aa 





Mycoplasma hyopneumoniae 232 (mhyo0)
Bacteria
691
49.8 %
(344)
53.8 % 
(372)
30.1 % 
(208)
28.6 %
46 aa 
3969 aa 





Mycoplasma hyopneumoniae 7448 (mhyo1)
Bacteria
663
52.0 %
(345)
57.2 % 
(379)
28.2 % 
(187)
28.5 %
37 aa 
2666 aa 





Mycoplasma hyopneumoniae J (mhyo2)
Bacteria
665
51.4 %
(342)
56.7 % 
(377)
28.3 % 
(188)
28.5 %
37 aa 
2660 aa 





Mycoplasma mobile 163K (mmob0)
Bacteria
635
56.1 %
(356)
65.2 % 
(414)
23.3 % 
(148)
25.0 %
38 aa 
4727 aa 





Mycoplasma mycoides subsp. mycoides SC (mmyc0)
Bacteria
1016
44.1 %
(448)
52.6 % 
(534)
28.1 % 
(286)
24.0 %
36 aa 
1972 aa 





Mycoplasma penetrans HF-2 (mpen0)
Bacteria
1037
46.1 %
(478)
49.9 % 
(517)
27.9 % 
(289)
25.7 %
47 aa 
3317 aa 





Mycoplasma pneumoniae M129 (mpne0)
Bacteria
688
51.5 %
(354)
55.5 % 
(382)
23.0 % 
(158)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis UAB CTIP (mpul0)
Bacteria
782
50.8 %
(397)
53.7 % 
(420)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Mycoplasma synoviae 53 (msyn0)
Bacteria
672
51.6 %
(347)
55.8 % 
(375)
20.4 % 
(137)
28.5 %
37 aa 
2638 aa 





Ureaplasma parvum serovar 3 str. ATCC 700970 (uure0)
Bacteria
611
51.4 %
(314)
54.0 % 
(330)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (fnuc0)
Bacteria
2067
49.6 %
(1026)
53.5 % 
(1105)
25.8 % 
(534)
27.2 %
20 aa 
3165 aa 





Pirellula sp. 1 (rbal0)
Bacteria
7325
29.4 %
(2152)
38.0 % 
(2787)
23.0 % 
(1685)
55.4 %
35 aa 
8173 aa 





Caulobacter crescentus CB15 (ccre0)
Bacteria
3737
52.2 %
(1949)
63.2 % 
(2360)
22.9 % 
(854)
67.2 %
30 aa 
2479 aa 





Bartonella henselae Houston-1 (bhen0)
Bacteria
1488
52.2 %
(777)
57.6 % 
(857)
26.2 % 
(390)
38.2 %
41 aa 
3036 aa 





Bartonella quintana str. Toulouse (bqui0)
Bacteria
1142
62.2 %
(710)
72.3 % 
(826)
28.6 % 
(327)
38.8 %
41 aa 
2855 aa 





Bradyrhizobium japonicum USDA 110 (bjap0)
Bacteria
8317
48.9 %
(4066)
54.7 % 
(4553)
24.7 % 
(2052)
64.1 %
30 aa 
5685 aa 





Nitrobacter hamburgensis X14 (nham0)
Bacteria
4326
40.5 %
(1751)
46.5 % 
(2012)
23.4 % 
(1014)
61.6 %
31 aa 
2845 aa 





Nitrobacter winogradskyi Nb-255 (nwin0)
Bacteria
3122
46.6 %
(1455)
52.6 % 
(1642)
21.2 % 
(663)
62.0 %
41 aa 
2002 aa 





Rhodopseudomonas palustris CGA009 (rpal0)
Bacteria
4822
53.7 %
(2589)
65.5 % 
(3159)
26.2 % 
(1264)
65.0 %
25 aa 
4335 aa 





Rhodopseudomonas palustris BisB18 (rpal1)
Bacteria
4886
49.1 %
(2400)
60.8 % 
(2973)
26.4 % 
(1288)
65.0 %
35 aa 
4435 aa 





Rhodopseudomonas palustris BisB5 (rpal2)
Bacteria
4397
52.1 %
(2293)
63.0 % 
(2769)
26.7 % 
(1174)
64.8 %
35 aa 
3094 aa 





Rhodopseudomonas palustris HaA2 (rpal3)
Bacteria
4683
53.0 %
(2480)
64.6 % 
(3025)
26.8 % 
(1255)
66.0 %
35 aa 
5769 aa 





Brucella abortus biovar 1 str. 9-941 (babo0)
Bacteria
3085
51.1 %
(1576)
61.3 % 
(1890)
23.4 % 
(723)
57.2 %
28 aa 
3422 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
53.5 %
(1710)
59.7 % 
(1910)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Brucella melitensis biovar Abortus (bmel1)
Bacteria
3034
52.1 %
(1582)
58.2 % 
(1767)
23.1 % 
(701)
57.2 %
30 aa 
3422 aa 





Brucella suis 1330 (bsui0)
Bacteria
3273
49.6 %
(1622)
59.5 % 
(1946)
23.5 % 
(768)
57.3 %
29 aa 
3420 aa 





Mesorhizobium sp. BNC1 (meso0)
Bacteria
4543
51.5 %
(2339)
58.0 % 
(2635)
23.8 % 
(1083)
61.1 %
41 aa 
2950 aa 





Mesorhizobium loti MAFF303099 (mlot0)
Bacteria
7281
47.7 %
(3470)
58.3 % 
(4247)
22.7 % 
(1650)
62.5 %
30 aa 
3930 aa 





Rhizobium etli CFN 42 (retl0)
Bacteria
5627
53.3 %
(2999)
59.0 % 
(3322)
23.7 % 
(1336)
61.2 %
32 aa 
2825 aa 





Agrobacterium tumefaciens str. C58 (atum0)
Bacteria
5301
53.2 %
(2820)
60.0 % 
(3178)
23.8 % 
(1263)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens str. C58 (atum1)
Bacteria
5402
52.5 %
(2838)
61.5 % 
(3321)
23.1 % 
(1246)
59.0 %
22 aa 
2831 aa 





Rhizobium leguminosarum bv. viciae 3841 (rleg0)
Bacteria
7150
51.5 %
(3684)
64.1 % 
(4585)
23.7 % 
(1697)
60.9 %
40 aa 
2839 aa 





Sinorhizobium meliloti 1021 (smel0)
Bacteria
6205
52.4 %
(3253)
58.6 % 
(3636)
23.8 % 
(1478)
62.2 %
31 aa 
2832 aa 





Jannaschia sp. CCS1 (jann0)
Bacteria
4283
49.5 %
(2118)
63.0 % 
(2700)
24.3 % 
(1039)
62.2 %
41 aa 
3486 aa 





Rhodobacter sphaeroides 2.4.1 (rsph0)
Bacteria
4126
50.2 %
(2071)
62.1 % 
(2563)
23.7 % 
(979)
68.8 %
20 aa 
2769 aa 





Roseobacter denitrificans OCh 114 (rden0)
Bacteria
3946
51.3 %
(2026)
57.0 % 
(2251)
24.0 % 
(948)
59.0 %
30 aa 
6682 aa 





Silicibacter sp. TM1040 (sili0)
Bacteria
3864
52.7 %
(2035)
59.0 % 
(2278)
22.3 % 
(862)
60.1 %
41 aa 
2150 aa 





Silicibacter pomeroyi DSS-3 (spom1)
Bacteria
4252
54.4 %
(2311)
67.2 % 
(2858)
23.9 % 
(1017)
64.1 %
30 aa 
8093 aa 





Gluconobacter oxydans 621H (goxy0)
Bacteria
2664
48.3 %
(1287)
54.5 % 
(1451)
20.0 % 
(532)
60.8 %
26 aa 
1750 aa 





Magnetospirillum magneticum AMB-1 (mmag0)
Bacteria
4559
46.6 %
(2126)
58.0 % 
(2642)
24.5 % 
(1116)
65.1 %
34 aa 
9529 aa 





Rhodospirillum rubrum ATCC 11170 (rrub0)
Bacteria
3841
51.8 %
(1989)
64.2 % 
(2467)
25.1 % 
(963)
65.4 %
20 aa 
1981 aa 





Anaplasma marginale str. St. Maries (amar0)
Bacteria
949
54.2 %
(514)
62.8 % 
(596)
33.2 % 
(315)
49.8 %
39 aa 
3492 aa 





Anaplasma phagocytophilum HZ (apha0)
Bacteria
1264
40.8 %
(516)
43.9 % 
(555)
26.3 % 
(333)
41.6 %
30 aa 
3373 aa 





Ehrlichia canis str. Jake (ecan0)
Bacteria
925
54.8 %
(507)
59.5 % 
(550)
32.3 % 
(299)
29.0 %
42 aa 
4245 aa 





Ehrlichia chaffeensis Arkansas (echa0)
Bacteria
1105
46.6 %
(515)
50.2 % 
(555)
31.3 % 
(346)
30.1 %
30 aa 
4313 aa 





Ehrlichia ruminantium str. Welgevonden (erum0)
Bacteria
888
56.2 %
(499)
61.0 % 
(542)
34.3 % 
(305)
27.5 %
42 aa 
3715 aa 





Ehrlichia ruminantium str. Welgevonden (erum1)
Bacteria
958
53.4 %
(512)
57.9 % 
(555)
35.8 % 
(343)
27.5 %
42 aa 
3558 aa 





Ehrlichia ruminantium str. Gardel (erum2)
Bacteria
950
53.7 %
(510)
57.7 % 
(548)
35.5 % 
(337)
27.5 %
42 aa 
3448 aa 





Neorickettsia sennetsu str. Miyayama (nsen0)
Bacteria
932
48.5 %
(452)
52.3 % 
(487)
29.5 % 
(275)
41.1 %
29 aa 
1921 aa 





Rickettsia bellii RML369-C (rbel0)
Bacteria
1429
45.5 %
(650)
49.5 % 
(707)
27.3 % 
(390)
31.6 %
40 aa 
1981 aa 





Rickettsia conorii str. Malish 7 (rcon0)
Bacteria
1374
42.0 %
(577)
45.4 % 
(624)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia felis URRWXCal2 (rfel0)
Bacteria
1512
44.5 %
(673)
48.7 % 
(737)
26.4 % 
(399)
32.5 %
40 aa 
3122 aa 





Rickettsia prowazekii Madrid E  (rpro0)
Bacteria
834
60.3 %
(503)
70.0 % 
(584)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Rickettsia typhi str. Wilmington (rtyp0)
Bacteria
838
59.8 %
(501)
69.2 % 
(580)
32.6 % 
(273)
28.9 %
24 aa 
2331 aa 





Wolbachia endosymbiont of Drosophila melanogaster (wend0)
Bacteria
1195
45.9 %
(548)
49.5 % 
(592)
24.7 % 
(295)
35.2 %
30 aa 
2843 aa 





Wolbachia endosymbiont strain TRS of Brugia malayi (wend1)
Bacteria
805
57.0 %
(459)
61.5 % 
(495)
25.8 % 
(208)
34.2 %
42 aa 
2839 aa 





Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Bacteria
1354
61.2 %
(829)
68.8 % 
(931)
26.2 % 
(355)
29.7 %
29 aa 
7317 aa 





Erythrobacter litoralis HTCC2594 (elit0)
Bacteria
3011
49.1 %
(1478)
54.4 % 
(1637)
24.2 % 
(728)
63.1 %
23 aa 
2409 aa 





Novosphingobium aromaticivorans DSM 12444 (naro0)
Bacteria
3324
52.5 %
(1744)
63.2 % 
(2101)
22.9 % 
(762)
65.2 %
41 aa 
3069 aa 





Sphingopyxis alaskensis RB2256 (sala0)
Bacteria
3195
51.3 %
(1638)
56.5 % 
(1806)
23.4 % 
(747)
65.5 %
41 aa 
2090 aa 





Zymomonas mobilis ZM4 (zmob0)
Bacteria
2041
51.3 %
(1048)
55.8 % 
(1139)
20.4 % 
(416)
46.3 %
30 aa 
2984 aa 





Bordetella avium 197N (bavi0)
Bacteria
3382
55.2 %
(1867)
61.3 % 
(2073)
25.1 % 
(849)
61.6 %
24 aa 
6460 aa 





Bordetella bronchiseptica RB50 (bbro0)
Bacteria
4994
58.4 %
(2916)
65.2 % 
(3257)
22.9 % 
(1146)
68.1 %
31 aa 
4218 aa 





Bordetella parapertussis 12822 (bpar0)
Bacteria
4185
60.2 %
(2518)
72.2 % 
(3022)
23.3 % 
(975)
68.1 %
37 aa 
4218 aa 





Bordetella pertussis Tohama I (bper0)
Bacteria
3447
56.3 %
(1941)
62.7 % 
(2160)
22.2 % 
(766)
67.7 %
37 aa 
4196 aa 





Burkholderia mallei ATCC 23344 (bmal0)
Bacteria
5025
50.0 %
(2515)
56.9 % 
(2858)
20.3 % 
(1022)
68.5 %
15 aa 
4580 aa 





Burkholderia xenovorans LB400 (bxen0)
Bacteria
8702
51.3 %
(4460)
63.3 % 
(5511)
23.5 % 
(2041)
62.6 %
30 aa 
4726 aa 





Burkholderia cenocepacia AU 1054 (bcen0)
Bacteria
6477
53.6 %
(3474)
60.8 % 
(3935)
24.4 % 
(1580)
66.9 %
30 aa 
4509 aa 





Burkholderia sp. 383 (burk0)
Bacteria
7717
52.8 %
(4077)
65.7 % 
(5070)
24.3 % 
(1876)
66.3 %
30 aa 
4283 aa 





Burkholderia pseudomallei K96243 (bpse0)
Bacteria
5729
51.5 %
(2948)
63.8 % 
(3653)
24.5 % 
(1406)
68.1 %
30 aa 
6274 aa 





Burkholderia pseudomallei 1710b (bpse1)
Bacteria
6347
46.1 %
(2927)
57.5 % 
(3649)
22.0 % 
(1396)
68.0 %
29 aa 
6274 aa 





Burkholderia thailandensis E264 (btha0)
Bacteria
5634
50.7 %
(2854)
63.0 % 
(3551)
23.4 % 
(1317)
67.6 %
30 aa 
5628 aa 





Ralstonia eutropha JMP134 (reut0)
Bacteria
6446
56.7 %
(3658)
63.2 % 
(4077)
23.1 % 
(1488)
64.4 %
38 aa 
3081 aa 





Ralstonia metallidurans CH34 (rmet0)
Bacteria
6319
51.8 %
(3271)
63.9 % 
(4037)
24.5 % 
(1551)
63.5 %
31 aa 
3714 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5120
48.9 %
(2505)
61.1 % 
(3130)
25.0 % 
(1282)
67.0 %
20 aa 
6889 aa 





Polaromonas sp. JS666 (pola0)
Bacteria
5453
52.9 %
(2882)
59.3 % 
(3231)
23.3 % 
(1273)
62.0 %
34 aa 
2793 aa 





Rhodoferax ferrireducens DSM 15236 (rfer0)
Bacteria
4418
54.1 %
(2392)
60.2 % 
(2660)
26.2 % 
(1158)
59.6 %
38 aa 
3026 aa 





Thiobacillus denitrificans ATCC 25259 (tden1)
Bacteria
2827
53.4 %
(1510)
64.9 % 
(1836)
27.0 % 
(762)
66.1 %
30 aa 
3472 aa 





Methylobacillus flagellatus KT (mfla0)
Bacteria
2753
56.0 %
(1542)
61.8 % 
(1700)
28.4 % 
(781)
55.7 %
35 aa 
3332 aa 





Chromobacterium violaceum ATCC 12472 (cvio0)
Bacteria
4407
50.6 %
(2232)
57.0 % 
(2510)
24.7 % 
(1087)
64.8 %
37 aa 
4130 aa 





Neisseria gonorrhoeae FA 1090 (ngon0)
Bacteria
2002
48.7 %
(975)
53.7 % 
(1075)
21.0 % 
(421)
52.7 %
36 aa 
1977 aa 





Neisseria meningitidis MC58 (nmen0)
Bacteria
2063
51.0 %
(1052)
55.1 % 
(1137)
23.0 % 
(475)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
50.3 %
(1038)
54.4 % 
(1123)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Nitrosomonas europaea ATCC 19718 (neur0)
Bacteria
2461
52.1 %
(1282)
58.2 % 
(1433)
25.8 % 
(636)
50.7 %
42 aa 
3064 aa 





Nitrosospira multiformis ATCC 25196 (nmul0)
Bacteria
2805
51.5 %
(1445)
56.3 % 
(1579)
27.5 % 
(772)
53.9 %
41 aa 
5216 aa 





Azoarcus sp. EbN1 (azoa0)
Bacteria
4598
42.9 %
(1974)
55.7 % 
(2559)
20.6 % 
(949)
64.7 %
14 aa 
2043 aa 





Dechloromonas aromatica RCB (daro0)
Bacteria
4171
53.4 %
(2229)
65.5 % 
(2734)
28.4 % 
(1185)
59.2 %
37 aa 
4854 aa 





Bdellovibrio bacteriovorus HD100 (bbac0)
Bacteria
3583
43.4 %
(1556)
47.4 % 
(1699)
29.3 % 
(1050)
50.6 %
30 aa 
2828 aa 





Desulfotalea psychrophila LSv54 (dpsy0)
Bacteria
3236
47.3 %
(1530)
58.2 % 
(1883)
29.8 % 
(964)
46.6 %
31 aa 
4725 aa 





Desulfovibrio desulfuricans G20 (ddes0)
Bacteria
3775
45.4 %
(1714)
56.2 % 
(2123)
23.7 % 
(894)
57.8 %
30 aa 
3252 aa 





Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough (dvul0)
Bacteria
3531
44.5 %
(1573)
49.4 % 
(1745)
23.3 % 
(822)
63.3 %
18 aa 
3038 aa 





Lawsonia intracellularis PHE/MN1-00 (lint2)
Bacteria
1342
55.3 %
(742)
65.5 % 
(879)
28.6 % 
(384)
33.1 %
67 aa 
8746 aa 





Geobacter metallireducens GS-15 (gmet0)
Bacteria
3532
54.4 %
(1920)
60.0 % 
(2118)
27.1 % 
(958)
59.5 %
32 aa 
3507 aa 





Geobacter sulfurreducens PCA (gsul0)
Bacteria
3447
52.5 %
(1811)
58.3 % 
(2009)
28.4 % 
(979)
60.9 %
30 aa 
5899 aa 





Pelobacter carbinolicus DSM 2380 (pcar0)
Bacteria
3119
55.1 %
(1718)
67.2 % 
(2095)
26.7 % 
(832)
55.1 %
37 aa 
1925 aa 





Anaeromyxobacter dehalogenans 2CP-C (adeh0)
Bacteria
4346
48.6 %
(2110)
59.4 % 
(2582)
25.5 % 
(1109)
74.9 %
38 aa 
4074 aa 





Myxococcus xanthus DK 1622 (mxan0)
Bacteria
7331
42.4 %
(3105)
52.6 % 
(3859)
22.2 % 
(1624)
68.9 %
30 aa 
14274 aa 





Syntrophus aciditrophicus SB (saci1)
Bacteria
3168
47.4 %
(1501)
56.4 % 
(1786)
24.1 % 
(764)
51.5 %
39 aa 
1606 aa 





Campylobacter jejuni subsp. jejuni NCTC 11168 (cjej0)
Bacteria
1634
55.9 %
(914)
61.4 % 
(1004)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Campylobacter jejuni RM1221 (cjej1)
Bacteria
1838
49.0 %
(901)
57.6 % 
(1058)
26.1 % 
(480)
30.3 %
30 aa 
1899 aa 





Thiomicrospira denitrificans ATCC 33889 (tden2)
Bacteria
2097
54.8 %
(1150)
65.8 % 
(1380)
27.3 % 
(572)
34.5 %
37 aa 
1864 aa 





Helicobacter acinonychis Sheeba (haci0)
Bacteria
1618
45.0 %
(728)
48.5 % 
(785)
23.1 % 
(374)
38.2 %
30 aa 
3216 aa 





Helicobacter hepaticus ATCC 51449 (hhep0)
Bacteria
1875
47.3 %
(886)
51.9 % 
(973)
28.5 % 
(535)
35.9 %
30 aa 
2894 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
47.4 %
(742)
51.5 % 
(806)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
50.1 %
(747)
54.5 % 
(813)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Helicobacter pylori HPAG1 (hpyl2)
Bacteria
1544
48.6 %
(750)
52.8 % 
(816)
25.2 % 
(389)
39.1 %
21 aa 
3185 aa 





Wolinella succinogenes DSMZ 1740 (wsuc0)
Bacteria
2044
56.1 %
(1147)
61.3 % 
(1252)
28.5 % 
(583)
48.5 %
33 aa 
2883 aa 





Saccharophagus degradans 2-40 (sdeg0)
Bacteria
4008
50.2 %
(2013)
55.4 % 
(2221)
30.6 % 
(1226)
45.8 %
38 aa 
14609 aa 





Colwellia psychrerythraea 34H (cpsy0)
Bacteria
4910
47.1 %
(2315)
53.0 % 
(2601)
27.8 % 
(1365)
38.0 %
15 aa 
3758 aa 





Idiomarina loihiensis L2TR (iloi0)
Bacteria
2628
56.6 %
(1488)
68.0 % 
(1787)
28.6 % 
(751)
47.0 %
34 aa 
1615 aa 





Pseudoalteromonas atlantica T6c (patl0)
Bacteria
4281
55.0 %
(2353)
65.4 % 
(2801)
27.8 % 
(1192)
44.6 %
33 aa 
4689 aa 





Pseudoalteromonas haloplanktis TAC125 (phal0)
Bacteria
3486
53.3 %
(1857)
63.0 % 
(2196)
28.3 % 
(986)
40.1 %
20 aa 
2410 aa 





Shewanella oneidensis MR-1 (sone0)
Bacteria
4778
44.3 %
(2116)
51.7 % 
(2471)
25.5 % 
(1220)
45.9 %
30 aa 
5020 aa 





Shewanella denitrificans OS217 (sden0)
Bacteria
3754
50.6 %
(1899)
57.5 % 
(2157)
27.4 % 
(1027)
45.1 %
36 aa 
5236 aa 





Baumannia cicadellinicola Hc (Homalodisca coagulata) (bcic0)
Bacteria
595
82.5 %
(491)
86.6 % 
(515)
20.5 % 
(122)
33.2 %
31 aa 
1408 aa 





Nitrosococcus oceani ATCC 19707 (noce0)
Bacteria
3017
48.9 %
(1475)
53.5 % 
(1613)
28.4 % 
(857)
50.3 %
37 aa 
1867 aa 





Buchnera aphidicola str. Sg (Schizaphis graminum) (baph0)
Bacteria
552
81.3 %
(449)
85.5 % 
(472)
17.0 % 
(94)
25.3 %
38 aa 
1413 aa 





Buchnera aphidicola str. Bp (Baizongia pistaciae) (baph1)
Bacteria
507
83.0 %
(421)
86.0 % 
(436)
18.5 % 
(94)
25.3 %
38 aa 
1404 aa 





Buchnera aphidicola str. APS (Acyrthosiphon pisum) (buch0)
Bacteria
574
82.2 %
(472)
87.3 % 
(501)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli K12 MG1655 (ecol0)
Bacteria
4404
54.4 %
(2396)
59.9 % 
(2639)
26.7 % 
(1176)
50.8 %
14 aa 
2367 aa 





Escherichia coli O157:H7 (ecol1)
Bacteria
5447
47.2 %
(2572)
52.3 % 
(2849)
24.0 % 
(1309)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 EDL933 (ecol2)
Bacteria
5449
47.3 %
(2576)
53.3 % 
(2902)
24.3 % 
(1323)
50.4 %
9 aa 
5188 aa 





Escherichia coli CFT073 (ecol3)
Bacteria
5379
47.5 %
(2553)
56.3 % 
(3030)
25.1 % 
(1351)
50.5 %
14 aa 
3216 aa 





Escherichia coli K12 W3110 (ecol4)
Bacteria
4227
55.8 %
(2360)
65.6 % 
(2771)
26.7 % 
(1130)
50.8 %
14 aa 
2367 aa 





Escherichia coli UTI89 (ecol5)
Bacteria
5211
48.8 %
(2542)
55.2 % 
(2878)
25.6 % 
(1336)
50.6 %
21 aa 
3262 aa 





Escherichia coli 536 (ecol6)
Bacteria
4629
53.5 %
(2478)
59.1 % 
(2734)
26.7 % 
(1237)
50.5 %
21 aa 
3242 aa 





Erwinia carotovora subsp. atroseptica SCRI1043 (ecar0)
Bacteria
4472
53.5 %
(2392)
59.1 % 
(2641)
26.7 % 
(1195)
51.0 %
31 aa 
7523 aa 





Photorhabdus luminescens subsp. laumondii TTO1 (plum0)
Bacteria
4683
44.9 %
(2103)
50.8 % 
(2379)
20.9 % 
(981)
42.8 %
30 aa 
16367 aa 





Salmonella enterica subsp. enterica serovar Typhi  str. CT18 (styp0)
Bacteria
4766
49.1 %
(2340)
58.4 % 
(2782)
25.8 % 
(1230)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4554
53.7 %
(2444)
63.7 % 
(2899)
27.2 % 
(1239)
52.2 %
14 aa 
5559 aa 





Salmonella enterica subsp. enterica serovar Typhi Ty2 (styp2)
Bacteria
4323
52.5 %
(2270)
62.0 % 
(2681)
26.7 % 
(1153)
52.1 %
13 aa 
3624 aa 





Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 (styp3)
Bacteria
4093
54.7 %
(2240)
64.4 % 
(2636)
27.5 % 
(1125)
52.2 %
21 aa 
4560 aa 





Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 (styp4)
Bacteria
4666
50.0 %
(2334)
60.1 % 
(2804)
26.2 % 
(1221)
52.1 %
21 aa 
5559 aa 





Shigella boydii Sb227 (sboy0)
Bacteria
4284
48.5 %
(2076)
55.0 % 
(2355)
25.5 % 
(1092)
51.1 %
14 aa 
1653 aa 





Shigella dysenteriae Sd197 (sdys0)
Bacteria
4497
43.6 %
(1962)
49.3 % 
(2215)
20.0 % 
(900)
51.0 %
14 aa 
1588 aa 





Shigella flexneri 2a str. 301 (sfle0)
Bacteria
4443
48.3 %
(2147)
59.7 % 
(2652)
25.4 % 
(1129)
50.7 %
13 aa 
1522 aa 





Shigella flexneri 2a str. 2457T (sfle1)
Bacteria
4068
50.2 %
(2044)
60.9 % 
(2479)
25.6 % 
(1043)
50.9 %
14 aa 
1522 aa 





Shigella flexneri 5 8401 (sfle2)
Bacteria
4116
51.3 %
(2110)
62.1 % 
(2555)
26.0 % 
(1072)
50.9 %
28 aa 
1554 aa 





Shigella sonnei Ss046 (sson0)
Bacteria
4461
49.1 %
(2190)
61.8 % 
(2756)
22.8 % 
(1017)
50.8 %
14 aa 
1653 aa 





Sodalis glossinidius str. morsitans (sglo0)
Bacteria
2516
52.1 %
(1311)
56.4 % 
(1420)
21.1 % 
(532)
54.5 %
33 aa 
1484 aa 





Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis (wbre0)
Bacteria
611
76.6 %
(468)
80.7 % 
(493)
23.7 % 
(145)
22.5 %
38 aa 
1405 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4074
52.2 %
(2128)
58.3 % 
(2375)
25.9 % 
(1054)
47.6 %
14 aa 
3705 aa 





Yersinia pestis KIM (ypes1)
Bacteria
4281
49.9 %
(2137)
55.6 % 
(2379)
25.8 % 
(1105)
47.7 %
14 aa 
3710 aa 





Yersinia pestis biovar Medievalis str. 91001 (ypes2)
Bacteria
4142
51.4 %
(2127)
57.4 % 
(2377)
26.4 % 
(1092)
47.7 %
20 aa 
3710 aa 





Yersinia pseudotuberculosis IP 32953 (ypes3)
Bacteria
4038
52.9 %
(2135)
58.6 % 
(2368)
26.8 % 
(1082)
47.6 %
14 aa 
5623 aa 





Yersinia pestis Antiqua (ypes4)
Bacteria
4364
52.4 %
(2287)
58.2 % 
(2541)
24.8 % 
(1082)
47.7 %
22 aa 
3705 aa 





Yersinia pestis Nepal516 (ypes5)
Bacteria
4094
52.9 %
(2165)
59.0 % 
(2416)
25.5 % 
(1045)
47.6 %
29 aa 
4270 aa 





Candidatus Blochmannia floridanus (bflo0)
Bacteria
583
80.8 %
(471)
84.0 % 
(490)
23.0 % 
(134)
27.4 %
38 aa 
1420 aa 





Candidatus Blochmannia pennsylvanicus str. BPEN (bpen0)
Bacteria
610
80.0 %
(488)
84.1 % 
(513)
20.8 % 
(127)
29.6 %
38 aa 
1416 aa 





Coxiella burnetii RSA 493 (cbur0)
Bacteria
2052
44.6 %
(915)
53.7 % 
(1101)
23.3 % 
(479)
42.6 %
30 aa 
1734 aa 





Legionella pneumophila str. Lens (lpne0)
Bacteria
2934
48.8 %
(1432)
60.1 % 
(1763)
28.5 % 
(836)
38.4 %
34 aa 
7919 aa 





Legionella pneumophila str. Paris (lpne1)
Bacteria
3166
48.5 %
(1537)
59.2 % 
(1873)
28.6 % 
(904)
38.3 %
23 aa 
7679 aa 





Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (lpne2)
Bacteria
2942
49.8 %
(1466)
60.5 % 
(1779)
29.0 % 
(854)
38.3 %
34 aa 
3780 aa 





Methylococcus capsulatus str. Bath (mcap0)
Bacteria
2960
52.2 %
(1545)
62.7 % 
(1856)
24.1 % 
(713)
63.6 %
24 aa 
3349 aa 





Alcanivorax borkumensis SK2 (abor0)
Bacteria
2755
56.4 %
(1554)
67.9 % 
(1872)
27.7 % 
(763)
54.7 %
33 aa 
3600 aa 





Hahella chejuensis KCTC 2396 (hche0)
Bacteria
6778
42.2 %
(2863)
47.8 % 
(3238)
24.2 % 
(1640)
53.9 %
29 aa 
5711 aa 





Chromohalobacter salexigens DSM 3043 (csal0)
Bacteria
3298
57.4 %
(1893)
63.5 % 
(2095)
25.2 % 
(831)
63.9 %
40 aa 
3314 aa 





Haemophilus ducreyi 35000HP (hduc0)
Bacteria
1717
50.6 %
(868)
54.9 % 
(942)
24.9 % 
(427)
38.2 %
30 aa 
4919 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
62.0 %
(1060)
66.5 % 
(1137)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Haemophilus influenzae 86-028NP (hinf1)
Bacteria
1791
57.7 %
(1033)
62.5 % 
(1119)
22.4 % 
(401)
38.2 %
30 aa 
1794 aa 





Haemophilus somnus 129PT (hsom0)
Bacteria
1798
57.4 %
(1032)
67.0 % 
(1204)
23.4 % 
(420)
37.2 %
37 aa 
5143 aa 





Mannheimia succiniciproducens MBEL55E (msuc0)
Bacteria
2384
54.4 %
(1296)
59.8 % 
(1425)
24.1 % 
(574)
42.5 %
30 aa 
5399 aa 





Pasteurella multocida subsp. multocida str. Pm70 (pmul0)
Bacteria
2014
61.1 %
(1230)
66.7 % 
(1343)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Acinetobacter sp. ADP1 (acin0)
Bacteria
3325
52.8 %
(1756)
63.0 % 
(2096)
25.3 % 
(841)
40.4 %
23 aa 
3711 aa 





Psychrobacter arcticus 273-4 (parc0)
Bacteria
2120
55.1 %
(1168)
66.7 % 
(1414)
23.4 % 
(497)
42.8 %
38 aa 
6715 aa 





Psychrobacter cryohalolentis K5 (pcry0)
Bacteria
2511
56.0 %
(1407)
67.5 % 
(1694)
25.1 % 
(630)
42.2 %
38 aa 
2301 aa 





Pseudomonas aeruginosa PAO1 (paer0)
Bacteria
5568
54.5 %
(3032)
66.8 % 
(3722)
26.8 % 
(1492)
66.6 %
10 aa 
5627 aa 





Pseudomonas entomophila L48 (pent0)
Bacteria
5134
51.8 %
(2658)
63.6 % 
(3267)
26.1 % 
(1339)
64.2 %
23 aa 
8493 aa 





Pseudomonas fluorescens Pf-5 (pflu0)
Bacteria
6137
52.9 %
(3245)
64.8 % 
(3977)
26.5 % 
(1628)
63.3 %
23 aa 
6675 aa 





Pseudomonas fluorescens PfO-1 (pflu1)
Bacteria
5736
53.0 %
(3042)
65.1 % 
(3732)
26.8 % 
(1540)
60.5 %
24 aa 
5654 aa 





Pseudomonas putida KT2440 (pput0)
Bacteria
5350
52.3 %
(2798)
59.1 % 
(3161)
25.3 % 
(1356)
61.5 %
23 aa 
8682 aa 





Pseudomonas syringae pv. tomato str. DC3000 (psyr0)
Bacteria
5608
48.4 %
(2717)
55.2 % 
(3093)
23.9 % 
(1339)
58.3 %
24 aa 
6274 aa 





Pseudomonas syringae pv. phaseolicola 1448A (psyr1)
Bacteria
5171
51.5 %
(2663)
59.1 % 
(3058)
24.1 % 
(1244)
57.9 %
24 aa 
5107 aa 





Pseudomonas syringae pv. syringae B728a (psyr2)
Bacteria
5089
53.4 %
(2716)
60.1 % 
(3057)
25.3 % 
(1286)
59.2 %
24 aa 
13537 aa 





Francisella tularensis subsp. tularensis SCHU S4 (ftul0)
Bacteria
3208
53.1 %
(1702)
57.2 % 
(1836)
29.9 % 
(958)
32.3 %
32 aa 
1422 aa 





Francisella tularensis subsp. holarctica LVS (ftul1)
Bacteria
1754
51.4 %
(901)
58.4 % 
(1025)
29.4 % 
(515)
32.2 %
36 aa 
1444 aa 





Thiomicrospira crunogena XCL-2 (tcru0)
Bacteria
2196
58.8 %
(1291)
68.0 % 
(1493)
25.8 % 
(567)
43.1 %
37 aa 
1597 aa 





Photobacterium profundum ss9 (ppro0)
Bacteria
5480
47.2 %
(2586)
53.2 % 
(2915)
26.9 % 
(1475)
41.7 %
35 aa 
4684 aa 





Vibrio cholerae O1 biovar eltor str. N16961 (vcho0)
Bacteria
3828
50.5 %
(1934)
56.1 % 
(2146)
27.4 % 
(1049)
47.5 %
26 aa 
4558 aa 





Vibrio fischeri ES114 (vfis0)
Bacteria
3802
54.4 %
(2069)
59.9 % 
(2277)
28.2 % 
(1071)
38.4 %
21 aa 
3971 aa 





Vibrio parahaemolyticus RIMD 2210633 (vpar0)
Bacteria
4832
49.7 %
(2401)
55.5 % 
(2682)
27.2 % 
(1316)
45.4 %
14 aa 
6084 aa 





Vibrio vulnificus CMCP6 (vvul0)
Bacteria
4538
51.7 %
(2344)
57.7 % 
(2618)
25.6 % 
(1161)
46.7 %
20 aa 
5206 aa 





Vibrio vulnificus YJ016 (vvul1)
Bacteria
5028
47.7 %
(2400)
53.5 % 
(2692)
26.7 % 
(1341)
46.7 %
34 aa 
5206 aa 





Xanthomonas axonopodis pv. citri str. 306 (xaxo0)
Bacteria
4429
49.4 %
(2188)
55.3 % 
(2451)
24.9 % 
(1102)
64.7 %
30 aa 
4753 aa 





Xanthomonas campestris pv. campestris str. ATCC 33913 (xcam0)
Bacteria
4181
51.2 %
(2140)
57.2 % 
(2391)
25.3 % 
(1056)
65.1 %
21 aa 
3961 aa 





Xanthomonas campestris pv. vesicatoria (xcam1)
Bacteria
4726
47.5 %
(2246)
53.2 % 
(2516)
24.8 % 
(1172)
64.6 %
30 aa 
3709 aa 





Xanthomonas campestris pv. campestris str. 8004 (xcam2)
Bacteria
4273
50.2 %
(2146)
56.1 % 
(2399)
25.4 % 
(1086)
65.0 %
28 aa 
3961 aa 





Xanthomonas oryzae pv. oryzae KACC10331 (xory0)
Bacteria
4637
39.8 %
(1845)
53.3 % 
(2471)
21.0 % 
(975)
63.7 %
30 aa 
2941 aa 





Xanthomonas oryzae pv. oryzae MAFF 311018 (xory1)
Bacteria
4372
42.0 %
(1837)
56.0 % 
(2449)
23.0 % 
(1007)
63.7 %
30 aa 
2927 aa 





Xylella fastidiosa 9a5c (xfas0)
Bacteria
2832
39.7 %
(1124)
44.1 % 
(1248)
24.7 % 
(700)
52.6 %
30 aa 
3455 aa 





Xylella fastidiosa Temecula1 (xfas1)
Bacteria
2036
52.2 %
(1062)
61.7 % 
(1257)
25.6 % 
(522)
51.8 %
30 aa 
3457 aa 





Leptospira interrogans serovar Lai str. 56601 (lint0)
Bacteria
4725
33.1 %
(1563)
41.1 % 
(1942)
26.6 % 
(1255)
35.0 %
30 aa 
3141 aa 





Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 (lint1)
Bacteria
3658
42.1 %
(1541)
52.0 % 
(1903)
31.5 % 
(1152)
35.0 %
37 aa 
3140 aa 





Borrelia afzelii PKo (bafz0)
Bacteria
927
51.5 %
(477)
58.4 % 
(541)
30.5 % 
(283)
28.3 %
16 aa 
2162 aa 





Borrelia burgdorferi B31 (bbur0)
Bacteria
1653
32.1 %
(531)
34.1 % 
(563)
27.9 % 
(462)
28.2 %
30 aa 
2166 aa 





Borrelia garinii PBi (bgar0)
Bacteria
1270
39.4 %
(501)
41.7 % 
(530)
26.7 % 
(339)
28.1 %
14 aa 
2162 aa 





Treponema denticola ATCC 35405 (tden0)
Bacteria
2767
40.9 %
(1131)
50.3 % 
(1393)
32.4 % 
(897)
37.9 %
30 aa 
3320 aa 





Treponema pallidum subsp. pallidum str. Nichols (tpal0)
Bacteria
1031
49.5 %
(510)
57.5 % 
(593)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima MSB8 (tmar0)
Bacteria
1846
60.1 %
(1110)
69.4 % 
(1281)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Cryptosporidium hominis TU502 (chom0)
Eukaryota
3934
33.2 %
(1308)
35.2 % 
(1385)
25.4 % 
(998)
0.0 %
9 aa 
4725 aa 





Cryptosporidium parvum (cpar0)
Eukaryota
3396
34.9 %
(1185)
36.9 % 
(1253)
31.4 % 
(1067)
0.0 %
55 aa 
13413 aa 





Plasmodium falciparum 3D7 (pfal0)
Eukaryota
5271
35.3 %
(1862)
46.0 % 
(2427)
35.2 % 
(1856)
20.4 %
13 aa 
10589 aa 





Plasmodium yoelii yoeliia str. 17XNL (pyoe0)
Eukaryota
7861
22.6 %
(1780)
40.6 % 
(3188)
33.2 % 
(2612)
0.0 %
1 aa 
6636 aa 





Guillardia theta (gthe0)
Eukaryota
632
49.4 %
(312)
50.3 % 
(318)
23.9 % 
(151)
0.0 %
29 aa 
2057 aa 





Giardia lamblia ATCC 50803 (gint0)
Eukaryota
9649
20.5 %
(1977)
23.4 % 
(2258)
19.7 % 
(1902)
0.0 %
33 aa 
8161 aa 





Leishmania major strain Friedlin (lmaj0)
Eukaryota
1340
35.6 %
(477)
45.5 % 
(610)
23.5 % 
(315)
0.0 %
51 aa 
17392 aa 





Trypanosoma brucei TREU927 (tbru0)
Eukaryota
8262
33.1 %
(2737)
42.4 % 
(3505)
25.2 % 
(2081)
0.0 %
30 aa 
8214 aa 





Phaeosphaeria nodorum SN15 (snod0)
Eukaryota
16597
29.6 %
(4911)
31.9 % 
(5288)
20.2 % 
(3352)
0.0 %
16 aa 
7290 aa 





Aspergillus nidulans FGSC A4 (anid0)
Eukaryota
9541
45.0 %
(4290)
49.2 % 
(4695)
25.1 % 
(2397)
0.0 %
12 aa 
7214 aa 





Aspergillus fumigatus Af293 (afum0)
Eukaryota
9923
42.5 %
(4217)
53.1 % 
(5274)
24.6 % 
(2441)
0.0 %
21 aa 
8515 aa 





Botryotinia fuckeliana B05.10 (bcin0)
Eukaryota
16448
25.5 %
(4201)
30.1 % 
(4953)
18.6 % 
(3053)
0.0 %
29 aa 
6808 aa 





Sclerotinia sclerotiorum 1980 (sscl0)
Eukaryota
14522
26.7 %
(3872)
33.6 % 
(4876)
18.5 % 
(2682)
0.0 %
28 aa 
6771 aa 





Trichoderma reesei QM9414 (tree0)
Eukaryota
9997
42.4 %
(4234)
47.1 % 
(4705)
20.7 % 
(2067)
0.0 %
49 aa 
20818 aa 





Gibberella zeae PH-1 (gzea0)
Eukaryota
11640
41.2 %
(4798)
48.2 % 
(5611)
25.6 % 
(2980)
0.0 %
11 aa 
11999 aa 





Magnaporthe grisea 70-15 (mgri0)
Eukaryota
11109
35.4 %
(3931)
39.0 % 
(4337)
23.7 % 
(2632)
0.0 %
9 aa 
6586 aa 





Chaetomium globosum CBS 148.51 (cglo0)
Eukaryota
11124
34.8 %
(3868)
37.9 % 
(4213)
20.6 % 
(2288)
0.0 %
3 aa 
9223 aa 





Neurospora crassa OR74A (ncra0)
Eukaryota
10626
31.7 %
(3373)
35.0 % 
(3722)
20.0 % 
(2127)
0.0 %
1 aa 
10820 aa 





Yarrowia lipolytica CLIB122 (ylip0)
Eukaryota
6544
44.1 %
(2889)
47.7 % 
(3124)
22.9 % 
(1501)
0.0 %
15 aa 
4696 aa 





Debaryomyces hansenii CBS767 (dhan0)
Eukaryota
6317
44.4 %
(2804)
53.4 % 
(3374)
22.9 % 
(1444)
0.0 %
13 aa 
4189 aa 





Ashbya gossypii ATCC 10895 (agos0)
Eukaryota
4726
47.2 %
(2232)
57.4 % 
(2715)
20.1 % 
(948)
0.0 %
25 aa 
4899 aa 





Kluyveromyces lactis (klac0)
Eukaryota
5336
45.0 %
(2399)
54.6 % 
(2914)
22.2 % 
(1187)
0.0 %
40 aa 
4915 aa 





Saccharomyces kluyveri (sklu0)
Eukaryota
2968
50.1 %
(1486)
53.7 % 
(1594)
19.7 % 
(585)
0.0 %
1 aa 
3160 aa 





Naumovia castellii (ncas0)
Eukaryota
4677
50.2 %
(2348)
54.4 % 
(2542)
19.7 % 
(921)
0.0 %
1 aa 
4933 aa 





Saccharomyces cerevisiae (scer0)
Eukaryota
5877
46.5 %
(2735)
50.5 % 
(2970)
21.7 % 
(1274)
0.0 %
16 aa 
4910 aa 





Saccharomyces bayanus (sbay0)
Eukaryota
8762
31.5 %
(2762)
34.1 % 
(2989)
25.9 % 
(2270)
0.0 %
1 aa 
3266 aa 





Saccharomyces kudriavzevii (skud0)
Eukaryota
3768
46.1 %
(1736)
49.5 % 
(1867)
20.0 % 
(753)
0.0 %
1 aa 
2158 aa 





Saccharomyces mikatae (smik0)
Eukaryota
8110
34.1 %
(2765)
36.8 % 
(2986)
25.0 % 
(2029)
0.0 %
1 aa 
2672 aa 





Saccharomyces paradoxus (spar0)
Eukaryota
8008
34.1 %
(2728)
39.2 % 
(3143)
26.2 % 
(2100)
0.0 %
1 aa 
4092 aa 





Candida glabrata (cgla0)
Eukaryota
5192
47.4 %
(2463)
51.9 % 
(2693)
21.4 % 
(1112)
0.0 %
41 aa 
4880 aa 





Schizosaccharomyces pombe 972h- (spom0)
Eukaryota
5287
51.1 %
(2701)
59.6 % 
(3151)
20.9 % 
(1104)
0.0 %
14 aa 
4924 aa 





Cryptococcus neoformans var. neoformans JEC21 (cneo0)
Eukaryota
6594
44.5 %
(2932)
48.4 % 
(3189)
23.1 % 
(1523)
0.0 %
17 aa 
4844 aa 





Phanerochaete chrysosporium RP-78 (pchr0)
Eukaryota
10048
39.4 %
(3963)
49.2 % 
(4946)
21.1 % 
(2116)
0.0 %
49 aa 
4827 aa 





Ustilago maydis 521 (umay0)
Eukaryota
6522
43.6 %
(2843)
47.7 % 
(3109)
24.2 % 
(1580)
0.0 %
20 aa 
5431 aa 





Encephalitozoon cuniculi GB-M1 (ecun0)
Eukaryota
1996
42.2 %
(842)
44.3 % 
(884)
20.6 % 
(412)
0.0 %
52 aa 
3436 aa 





Rhizopus oryzae RA 99-880 (rory0)
Eukaryota
17467
34.4 %
(6008)
42.2 % 
(7372)
15.5 % 
(2704)
0.0 %
29 aa 
5940 aa 





Drosophila melanogaster (dmel0)
Eukaryota
19191
51.2 %
(9831)
59.2 % 
(11354)
30.5 % 
(5851)
0.0 %
25 aa 
23015 aa 





Anopheles gambiae (agam0)
Eukaryota
15815
49.2 %
(7786)
57.5 % 
(9088)
24.7 % 
(3899)
44.3 %
20 aa 
8588 aa 





Apis mellifera (amel0)
Eukaryota
27768
48.8 %
(13539)
55.2 % 
(15318)
28.5 % 
(7901)
32.8 %
6 aa 
7687 aa 





Bombyx mori (bmor0)
Eukaryota
21314
32.4 %
(6896)
35.8 % 
(7638)
16.6 % 
(3542)
0.0 %
28 aa 
4621 aa 





Fugu rubripes (trub0)
Eukaryota
26734
55.4 %
(14820)
60.2 % 
(16096)
27.3 % 
(7297)
0.0 %
47 aa 
23275 aa 





Tetraodon nigroviridis (tnig0)
Eukaryota
28018
49.5 %
(13878)
57.0 % 
(15982)
24.6 % 
(6901)
46.4 %
24 aa 
10495 aa 





Danio rerio (drer0)
Eukaryota
32156
63.2 %
(20322)
70.7 % 
(22732)
27.4 % 
(8797)
36.6 %
4 aa 
18412 aa 





Xenopus tropicalis (xtro0)
Eukaryota
27929
53.9 %
(15042)
58.3 % 
(16287)
29.0 % 
(8098)
0.0 %
49 aa 
9945 aa 





Gallus gallus (ggal0)
Eukaryota
28429
57.5 %
(16338)
62.5 % 
(17759)
25.5 % 
(7261)
41.5 %
15 aa 
6981 aa 





Mus musculus (mmus0)
Eukaryota
36485
57.4 %
(20950)
61.4 % 
(22394)
27.3 % 
(9960)
41.7 %
3 aa 
7397 aa 





Rattus norvegicus (rnor0)
Eukaryota
32556
61.1 %
(19901)
70.2 % 
(22844)
30.0 % 
(9767)
41.9 %
6 aa 
7357 aa 





Homo sapiens (hsap0)
Eukaryota
33882
57.6 %
(19515)
63.2 % 
(21400)
27.0 % 
(9163)
40.8 %
15 aa 
32794 aa 





Homo sapiens (hsap1)
Eukaryota
39091
43.4 %
(16983)
46.7 % 
(18248)
20.2 % 
(7906)
0.0 %
13 aa 
3395 aa 





Homo sapiens (hsap2)
Eukaryota
27469
57.1 %
(15691)
64.7 % 
(17783)
27.6 % 
(7582)
0.0 %
16 aa 
34350 aa 





Homo sapiens cDNA (huge0)
Eukaryota
2037
58.0 %
(1182)
72.1 % 
(1469)
22.1 % 
(450)
0.0 %
73 aa 
4594 aa 





Pan troglodytes (ptro0)
Eukaryota
39661
48.5 %
(19220)
51.4 % 
(20379)
21.0 % 
(8309)
40.7 %
1 aa 
6640 aa 





Canis familiaris (cfam0)
Eukaryota
33651
66.4 %
(22344)
71.3 % 
(23986)
23.7 % 
(7964)
0.0 %
15 aa 
14730 aa 





Monodelphis domestica (mdom0)
Eukaryota
27035
59.7 %
(16139)
64.3 % 
(17378)
29.1 % 
(7861)
36.8 %
11 aa 
34341 aa 





Ciona intestinalis (cint0)
Eukaryota
14195
55.2 %
(7840)
57.9 % 
(8220)
24.6 % 
(3494)
0.0 %
35 aa 
21226 aa 





Caenorhabditis briggsae (cbri0)
Eukaryota
14713
46.3 %
(6809)
53.6 % 
(7887)
36.2 % 
(5329)
0.0 %
22 aa 
7747 aa 





Caenorhabditis elegans (cele0)
Eukaryota
22881
37.8 %
(8656)
40.0 % 
(9150)
37.4 % 
(8554)
0.0 %
16 aa 
18562 aa 





Dictyostelium discoideum AX4 (ddis0)
Eukaryota
13337
36.3 %
(4839)
39.2 % 
(5227)
27.4 % 
(3652)
0.0 %
39 aa 
11103 aa 





Cyanidioschyzon merolae strain 10D (cmer0)
Eukaryota
5254
49.7 %
(2611)
58.3 % 
(3062)
23.2 % 
(1217)
0.0 %
25 aa 
6020 aa 





Chlamydomonas reinhardtii (crei0)
Eukaryota
19909
25.7 %
(5108)
26.8 % 
(5341)
19.5 % 
(3875)
0.0 %
6 aa 
13501 aa 





Oryza sativa (japonica cultivar-group) (osat0)
Eukaryota
40940
23.8 %
(9727)
29.3 % 
(11999)
21.1 % 
(8658)
43.5 %
23 aa 
4190 aa 





Oryza sativa cDNA(japonica cultivar-group) (osat1)
Eukaryota
32071
41.5 %
(13311)
50.0 % 
(16040)
26.4 % 
(8470)
0.0 %
1 aa 
1921 aa 





Arabidopsis thaliana (atha0)
Eukaryota
30690
47.7 %
(14637)
53.0 % 
(16268)
27.5 % 
(8453)
0.0 %
19 aa 
5336 aa 





Thalassiosira pseudonana CCMP1335 (tpse0)
Eukaryota
11397
46.2 %
(5270)
54.8 % 
(6246)
13.1 % 
(1496)
0.0 %
25 aa 
4697 aa 





Phytophthora ramorum (pram0)
Eukaryota
16066
40.2 %
(6464)
43.9 % 
(7057)
23.8 % 
(3830)
0.0 %
32 aa 
10810 aa 





Phytophthora sojae (psoj0)
Eukaryota
19276
36.4 %
(7016)
43.9 % 
(8463)
23.1 % 
(4462)
0.0 %
10 aa 
10590 aa 





Pseudomonas aeruginosa phage phi CTX Viruses. (bpct0)
Viruses
47
2.1 %
(1)
6.4 % 
(3)
12.8 % 
(6)
62.6 %
35 aa 
904 aa 





Bacteriophage phig1e Viruses. (bpg10)
Viruses
49
10.2 %
(5)
10.2 % 
(5)
12.2 % 
(6)
42.7 %
49 aa 
1662 aa 





PA01 (bppa0)
Viruses
34
11.8 %
(4)
14.7 % 
(5)
8.8 % 
(3)
0.0 %
23 aa 
745 aa 





RB69 (bprb0)
Viruses
256
20.3 %
(52)
25.0 % 
(64)
9.4 % 
(24)
0.0 %
19 aa 
1277 aa 





Rd (bprd0)
Viruses
47
8.5 %
(4)
19.1 % 
(9)
8.5 % 
(4)
0.0 %
38 aa 
731 aa 





S-PM2 (bpsp4)
Viruses
241
12.4 %
(30)
22.4 % 
(54)
6.6 % 
(16)
0.0 %
25 aa 
3779 aa 





T3 (bpt30)
Viruses
44
15.9 %
(7)
25.0 % 
(11)
15.9 % 
(7)
49.9 %
25 aa 
884 aa 





¦ÕMFV1 (bppm1)
Viruses
17
35.3 %
(6)
41.2 % 
(7)
11.8 % 
(2)
0.0 %
53 aa 
615 aa 





Staphylococcus phage K Viruses. (bpk_0)
Viruses
115
17.4 %
(20)
19.1 % 
(22)
10.4 % 
(12)
0.0 %
99 aa 
1351 aa 





Bacteriophage A511 (bpa50)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
36.7 %
106 aa 
562 aa 





Bacteriophage Aaphi23 (bpaa0)
Viruses
66
7.6 %
(5)
12.1 % 
(8)
19.7 % 
(13)
0.0 %
27 aa 
800 aa 





Burkholderia cepacia phage Bcep781 (bpbc0)
Viruses
61
11.5 %
(7)
13.1 % 
(8)
4.9 % 
(3)
63.3 %
38 aa 
873 aa 





Burkholderia cepacia phage Bcep1 (bpbc1)
Viruses
71
8.5 %
(6)
11.3 % 
(8)
9.9 % 
(7)
0.0 %
41 aa 
824 aa 





Burkholderia cepacia phage Bcep43 (bpbc3)
Viruses
66
10.6 %
(7)
12.1 % 
(8)
7.6 % 
(5)
0.0 %
47 aa 
824 aa 





Burkholderia cenocepacia phage BcepB1A (bpbc5)
Viruses
58
8.6 %
(5)
15.5 % 
(9)
13.8 % 
(8)
0.0 %
53 aa 
919 aa 





Mycobacteriophage Bxz1 (bpbx1)
Viruses
225
4.9 %
(11)
5.8 % 
(13)
8.4 % 
(19)
0.0 %
31 aa 
1370 aa 





Bacteriophage EJ-1 (bpej0)
Viruses
73
8.2 %
(6)
9.6 % 
(7)
19.2 % 
(14)
0.0 %
34 aa 
748 aa 





Halovirus HF2 (bphf0)
Viruses
114
7.9 %
(9)
7.9 % 
(9)
6.1 % 
(7)
55.8 %
29 aa 
1288 aa 





Haemophilus phage HP1 (bphp0)
Viruses
41
14.6 %
(6)
17.1 % 
(7)
12.2 % 
(5)
40.0 %
61 aa 
925 aa 





Haemophilus phage HP2 (bphp1)
Viruses
36
11.1 %
(4)
13.9 % 
(5)
13.9 % 
(5)
39.9 %
61 aa 
910 aa 





Bacteriophage KVP40 (bpkv0)
Viruses
381
13.9 %
(53)
15.5 % 
(59)
11.3 % 
(43)
0.0 %
36 aa 
1256 aa 





Bacteriophage P4 (bpp40)
Viruses
13
7.7 %
(1)
23.1 % 
(3)
7.7 % 
(1)
49.5 %
88 aa 
777 aa 





Pseudomonas phage phiKZ (bpph0)
Viruses
306
5.9 %
(18)
11.1 % 
(34)
11.8 % 
(36)
36.8 %
63 aa 
2237 aa 





Virus PhiCh1 (bpph1)
Viruses
98
8.2 %
(8)
11.2 % 
(11)
5.1 % 
(5)
61.9 %
54 aa 
581 aa 





Cyanophage P-SSM2 (bpps3)
Viruses
329
14.0 %
(46)
23.4 % 
(77)
8.2 % 
(27)
0.0 %
24 aa 
5195 aa 





Cyanophage P-SSM4 (bpps4)
Viruses
198
14.6 %
(29)
21.7 % 
(43)
13.6 % 
(27)
0.0 %
35 aa 
7312 aa 





Vibrio harveyi bacteriophage VHML (bpvh0)
Viruses
57
7.0 %
(4)
12.3 % 
(7)
7.0 % 
(4)
50.6 %
33 aa 
1023 aa 





Bacteriophage WPhi (bpwp0)
Viruses
44
6.8 %
(3)
13.6 % 
(6)
11.4 % 
(5)
0.0 %
56 aa 
815 aa 





Burkholderia cenocepacia phage BcepMu (bpbc4)
Viruses
53
7.5 %
(4)
13.2 % 
(7)
15.1 % 
(8)
0.0 %
67 aa 
846 aa 





Enterobacteria phage Mu (bpmu0)
Viruses
53
17.0 %
(9)
17.0 % 
(9)
11.3 % 
(6)
52.1 %
39 aa 
690 aa 





Enterobacteria phage P1 (bpp11)
Viruses
110
11.8 %
(13)
14.5 % 
(16)
9.1 % 
(10)
0.0 %
31 aa 
2255 aa 





Enterobacteria phage 186 (bp180)
Viruses
46
19.6 %
(9)
19.6 % 
(9)
13.0 % 
(6)
53.1 %
58 aa 
812 aa 





Enterobacteria phage P2 (bpp20)
Viruses
42
4.8 %
(2)
9.5 % 
(4)
14.3 % 
(6)
50.2 %
56 aa 
815 aa 





Bacteriophage L-413C (bpl40)
Viruses
40
5.0 %
(2)
5.0 % 
(2)
17.5 % 
(7)
52.1 %
56 aa 
913 aa 





Bacteriophage PSP3 (bpps2)
Viruses
42
9.5 %
(4)
9.5 % 
(4)
9.5 % 
(4)
0.0 %
60 aa 
814 aa 





Bacteriophage K139 (bpk10)
Viruses
44
9.1 %
(4)
9.1 % 
(4)
6.8 % 
(3)
48.9 %
53 aa 
800 aa 





Bacteriophage 44RR2.8t (bp441)
Viruses
252
19.4 %
(49)
24.6 % 
(62)
6.7 % 
(17)
0.0 %
32 aa 
1420 aa 





Bacteriophage Aeh1 (bpae0)
Viruses
331
14.5 %
(48)
19.0 % 
(63)
11.2 % 
(37)
0.0 %
28 aa 
1358 aa 





Enterobacteria phage RB49 (bprb1)
Viruses
272
17.3 %
(47)
21.7 % 
(59)
11.0 % 
(30)
0.0 %
32 aa 
1246 aa 





Bacteriophage RM 378 (bprm0)
Viruses
146
8.2 %
(12)
12.3 % 
(18)
9.6 % 
(14)
42.5 %
27 aa 
1019 aa 





Enterobacteria phage T4 (bpt40)
Viruses
278
20.5 %
(57)
25.2 % 
(70)
10.4 % 
(29)
35.3 %
26 aa 
1289 aa 





Acyrthosiphon pisum bacteriophage APSE-1 (bpap0)
Viruses
54
11.1 %
(6)
14.8 % 
(8)
18.5 % 
(10)
43.9 %
73 aa 
993 aa 





Burkholderia cepacia phage Bcep22 (bpbc2)
Viruses
78
6.4 %
(5)
16.7 % 
(13)
9.0 % 
(7)
0.0 %
32 aa 
4602 aa 





Bordetella phage BIP-1 (bpbi7)
Viruses
48
16.7 %
(8)
18.8 % 
(9)
8.3 % 
(4)
0.0 %
56 aa 
2052 aa 





Bordetella phage BMP-1 (bpbm0)
Viruses
47
17.0 %
(8)
19.1 % 
(9)
8.5 % 
(4)
0.0 %
56 aa 
2052 aa 





Bordetella phage BPP-1 (bpbp0)
Viruses
49
16.3 %
(8)
18.4 % 
(9)
10.2 % 
(5)
0.0 %
56 aa 
2052 aa 





Salmonella typhimurium bacteriophage ES18 (bpes0)
Viruses
79
10.1 %
(8)
10.1 % 
(8)
13.9 % 
(11)
0.0 %
26 aa 
1124 aa 





Bacteriophage H-19B (bph10)
Viruses
22
13.6 %
(3)
13.6 % 
(3)
13.6 % 
(3)
45.9 %
44 aa 
315 aa 





Mycoplasma virus P1 (bpp10)
Viruses
11
0.0 %
(0)
18.2 % 
(2)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





Cyanophage P60 (bpp60)
Viruses
80
11.2 %
(9)
17.5 % 
(14)
6.2 % 
(5)
53.2 %
40 aa 
680 aa 





Pseudomonas aeruginosa bacteriophage PaP2 (bppa2)
Viruses
58
3.4 %
(2)
6.9 % 
(4)
13.8 % 
(8)
0.0 %
48 aa 
1849 aa 





Cyanophage P-SSP7 (bpps5)
Viruses
53
13.2 %
(7)
22.6 % 
(12)
11.3 % 
(6)
0.0 %
26 aa 
1245 aa 





Shigella flexneri bacteriophage V (bpsf1)
Viruses
53
15.1 %
(8)
32.1 % 
(17)
13.2 % 
(7)
50.8 %
56 aa 
611 aa 





Salmonella typhimurium phage ST64B (bpst0)
Viruses
56
14.3 %
(8)
28.6 % 
(16)
8.9 % 
(5)
51.0 %
54 aa 
642 aa 





Salmonella typhimurium bacteriophage ST64T (bpst1)
Viruses
65
18.5 %
(12)
20.0 % 
(13)
10.8 % 
(7)
47.5 %
37 aa 
725 aa 





Vibriophage VP5 (bpvp1)
Viruses
12
50.0 %
(6)
50.0 % 
(6)
0.0 % 
(0)
0.0 %
105 aa 
782 aa 





Vibriophage VP2 (bpvp2)
Viruses
14
42.9 %
(6)
42.9 % 
(6)
0.0 % 
(0)
0.0 %
105 aa 
782 aa 





Enterobacteria phage epsilon15 (bpep0)
Viruses
49
4.1 %
(2)
8.2 % 
(4)
18.4 % 
(9)
50.8 %
35 aa 
1070 aa 





Bacteriophage KS7 (bpks0)
Viruses
56
12.5 %
(7)
14.3 % 
(8)
7.1 % 
(4)
0.0 %
20 aa 
728 aa 





Bacteriophage Mx8 (bpmx0)
Viruses
86
7.0 %
(6)
12.8 % 
(11)
11.6 % 
(10)
0.0 %
32 aa 
743 aa 





Enterobacteria phage P22 (bpp21)
Viruses
36
19.4 %
(7)
22.2 % 
(8)
5.6 % 
(2)
47.1 %
47 aa 
667 aa 





Enterobacteria phage Sf6 (bpsf2)
Viruses
66
16.7 %
(11)
18.2 % 
(12)
12.1 % 
(8)
0.0 %
27 aa 
708 aa 





Enterobacteria phage SP6 (bpsp0)
Viruses
20
25.0 %
(5)
35.0 % 
(7)
5.0 % 
(1)
46.1 %
42 aa 
874 aa 





Pseudomonas phage gh-1 (bpgh0)
Viruses
42
19.0 %
(8)
23.8 % 
(10)
7.1 % 
(3)
57.4 %
25 aa 
1392 aa 





Pseudomonas aeruginosa phage PaP3 (bppa1)
Viruses
69
10.1 %
(7)
13.0 % 
(9)
11.6 % 
(8)
52.1 %
26 aa 
1056 aa 





Bacteriophage phiYeO3-12 (bpph2)
Viruses
59
20.3 %
(12)
25.4 % 
(15)
15.3 % 
(9)
50.6 %
25 aa 
1320 aa 





Yersinia pestis phage phiA1122 (bpphD)
Viruses
50
18.0 %
(9)
26.0 % 
(13)
10.0 % 
(5)
48.3 %
27 aa 
1318 aa 





bacteriophage phiKMV (bpphF)
Viruses
48
14.6 %
(7)
22.9 % 
(11)
12.5 % 
(6)
0.0 %
64 aa 
1337 aa 





Roseophage SIO1 (bpsi0)
Viruses
34
0.0 %
(0)
0.0 % 
(0)
11.8 % 
(4)
46.2 %
77 aa 
1484 aa 





Enterobacteria phage T7 (bpt70)
Viruses
58
17.2 %
(10)
24.1 % 
(14)
12.1 % 
(7)
48.4 %
29 aa 
1318 aa 





Vibriophage VpV262 (bpvp0)
Viruses
67
3.0 %
(2)
13.4 % 
(9)
9.0 % 
(6)
49.5 %
46 aa 
1536 aa 





Staphylococcus phage 44AHJD (bp440)
Viruses
21
9.5 %
(2)
14.3 % 
(3)
9.5 % 
(2)
29.6 %
55 aa 
755 aa 





Bacteriophage B103 (bpb11)
Viruses
17
41.2 %
(7)
47.1 % 
(8)
5.9 % 
(1)
37.7 %
100 aa 
860 aa 





Streptococcus phage C1 (bpc10)
Viruses
20
5.0 %
(1)
10.0 % 
(2)
5.0 % 
(1)
0.0 %
51 aa 
784 aa 





Streptococcus phage Cp-1 (bpcp0)
Viruses
28
10.7 %
(3)
10.7 % 
(3)
14.3 % 
(4)
38.9 %
62 aa 
586 aa 





Bacillus phage GA-1 (bpga0)
Viruses
35
25.7 %
(9)
25.7 % 
(9)
22.9 % 
(8)
34.7 %
25 aa 
740 aa 





Staphylococcus aureus phage phiP68 (bpphE)
Viruses
22
13.6 %
(3)
18.2 % 
(4)
9.1 % 
(2)
29.3 %
55 aa 
755 aa 





Bacillus phage PZA (bppz0)
Viruses
27
33.3 %
(9)
37.0 % 
(10)
11.1 % 
(3)
39.7 %
37 aa 
854 aa 





Bacteriophage 77 (bp770)
Viruses
69
10.1 %
(7)
15.9 % 
(11)
10.1 % 
(7)
0.0 %
33 aa 
1509 aa 





Bacteriophage A118 (bpa10)
Viruses
72
4.2 %
(3)
12.5 % 
(9)
13.9 % 
(10)
36.1 %
21 aa 
1794 aa 





Bacteriophage B1 (bpb10)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
36.8 %
65 aa 
273 aa 





Mycobacteriophage Barnyard (bpba0)
Viruses
109
2.8 %
(3)
5.5 % 
(6)
9.2 % 
(10)
0.0 %
44 aa 
2047 aa 





Bacteriophage bIL170 (bpbi0)
Viruses
64
9.4 %
(6)
9.4 % 
(6)
10.9 % 
(7)
34.3 %
33 aa 
916 aa 





Bacteriophage bIL285 (bpbi1)
Viruses
62
11.3 %
(7)
12.9 % 
(8)
9.7 % 
(6)
35.2 %
42 aa 
894 aa 





Bacteriophage bIL286 (bpbi2)
Viruses
61
9.8 %
(6)
11.5 % 
(7)
13.1 % 
(8)
35.3 %
32 aa 
1640 aa 





Bacteriophage bIL309 (bpbi3)
Viruses
56
7.1 %
(4)
8.9 % 
(5)
14.3 % 
(8)
35.7 %
40 aa 
1441 aa 





Bacteriophage bIL310 (bpbi4)
Viruses
29
0.0 %
(0)
3.4 % 
(1)
10.3 % 
(3)
35.9 %
28 aa 
542 aa 





Bacteriophage bIL311 (bpbi5)
Viruses
22
13.6 %
(3)
13.6 % 
(3)
9.1 % 
(2)
34.2 %
38 aa 
489 aa 





Bacteriophage bIL312 (bpbi6)
Viruses
27
7.4 %
(2)
7.4 % 
(2)
11.1 % 
(3)
33.0 %
46 aa 
480 aa 





Lactococcus phage BK5-T (bpbk0)
Viruses
63
12.7 %
(8)
14.3 % 
(9)
15.9 % 
(10)
35.0 %
42 aa 
1904 aa 





Mycobacteriophage Bxb1 (bpbx0)
Viruses
86
7.0 %
(6)
11.6 % 
(10)
12.8 % 
(11)
63.6 %
31 aa 
823 aa 





Mycobacteriophage Bxz2 (bpbx2)
Viruses
86
9.3 %
(8)
11.6 % 
(10)
14.0 % 
(12)
0.0 %
20 aa 
1008 aa 





Mycobacteriophage Che8 (bpch0)
Viruses
112
4.5 %
(5)
6.2 % 
(7)
8.9 % 
(10)
0.0 %
31 aa 
1188 aa 





Mycobacteriophage Che9c (bpch1)
Viruses
84
2.4 %
(2)
4.8 % 
(4)
16.7 % 
(14)
0.0 %
44 aa 
1213 aa 





Mycobacteriophage Che9d (bpch2)
Viruses
111
5.4 %
(6)
6.3 % 
(7)
7.2 % 
(8)
0.0 %
34 aa 
1183 aa 





Mycobacteriophage CJW1 (bpcj0)
Viruses
141
8.5 %
(12)
9.9 % 
(14)
7.1 % 
(10)
0.0 %
32 aa 
1576 aa 





Mycobacteriophage Corndog (bpco0)
Viruses
122
4.1 %
(5)
7.4 % 
(9)
13.1 % 
(16)
0.0 %
33 aa 
1461 aa 





Mycobacteriophage D29 (bpd20)
Viruses
79
13.9 %
(11)
16.5 % 
(13)
10.1 % 
(8)
63.5 %
28 aa 
837 aa 





Bacteriophage HK620 (bphk1)
Viruses
58
15.5 %
(9)
17.2 % 
(10)
8.6 % 
(5)
46.7 %
27 aa 
722 aa 





Listeria phage 2389 (bpl20)
Viruses
57
10.5 %
(6)
10.5 % 
(6)
12.3 % 
(7)
34.7 %
48 aa 
1026 aa 





Lactobacillus casei bacteriophage A2 (bplc0)
Viruses
61
8.2 %
(5)
9.8 % 
(6)
8.2 % 
(5)
44.9 %
59 aa 
1621 aa 





Lactobacillus johnsonii prophage Lj928 (bplj0)
Viruses
50
8.0 %
(4)
10.0 % 
(5)
12.0 % 
(6)
0.0 %
48 aa 
1544 aa 





Lactobacillus johnsonii prophage Lj965 (bplj1)
Viruses
46
10.9 %
(5)
13.0 % 
(6)
13.0 % 
(6)
0.0 %
49 aa 
2021 aa 





Mycobacteriophage Omega (bpom0)
Viruses
237
8.0 %
(19)
11.0 % 
(26)
9.3 % 
(22)
0.0 %
22 aa 
1599 aa 





Lactococcus phage P335 (bpp30)
Viruses
49
12.2 %
(6)
20.4 % 
(10)
10.2 % 
(5)
35.4 %
54 aa 
1711 aa 





Mycobacteriophage PG1 (bppg0)
Viruses
100
6.0 %
(6)
8.0 % 
(8)
10.0 % 
(10)
0.0 %
45 aa 
1932 aa 





Bacteriophage phi3626 (bpph5)
Viruses
50
20.0 %
(10)
28.0 % 
(14)
14.0 % 
(7)
28.4 %
39 aa 
983 aa 





Bacteriophage phi ETA (bpph7)
Viruses
66
10.6 %
(7)
21.2 % 
(14)
13.6 % 
(9)
35.4 %
48 aa 
989 aa 





Temperate phage PhiNIH1.1 (bpph8)
Viruses
55
12.7 %
(7)
23.6 % 
(13)
12.7 % 
(7)
38.6 %
49 aa 
1086 aa 





Staphylococcus aureus prophage phiPV83 (bpph9)
Viruses
65
9.2 %
(6)
23.1 % 
(15)
13.8 % 
(9)
33.5 %
46 aa 
1313 aa 





Staphylococcus aureus temperate phage phiSLT (bpphA)
Viruses
62
19.4 %
(12)
25.8 % 
(16)
14.5 % 
(9)
33.3 %
35 aa 
1374 aa 





Lactobacillus bacteriophage phi adh (bpphB)
Viruses
63
11.1 %
(7)
15.9 % 
(10)
12.7 % 
(8)
35.6 %
49 aa 
1487 aa 





Staphylococcus aureus phage phi 11 (bpphH)
Viruses
53
7.5 %
(4)
24.5 % 
(13)
9.4 % 
(5)
0.0 %
57 aa 
910 aa 





Staphylococcus aureus phage phi 12 (bpphI)
Viruses
49
22.4 %
(11)
26.5 % 
(13)
4.1 % 
(2)
0.0 %
54 aa 
2066 aa 





Staphylococcus aureus phage phi 13 (bpphJ)
Viruses
49
8.2 %
(4)
22.4 % 
(11)
18.4 % 
(9)
0.0 %
52 aa 
1550 aa 





Bacteriophage phi JL001 (bppj0)
Viruses
90
7.8 %
(7)
14.4 % 
(13)
11.1 % 
(10)
0.0 %
29 aa 
1152 aa 





Bacteriophage phiKO2 (bppk0)
Viruses
64
12.5 %
(8)
21.9 % 
(14)
9.4 % 
(6)
0.0 %
33 aa 
3433 aa 





Bacteriophage phi LC3 (bppl0)
Viruses
51
13.7 %
(7)
23.5 % 
(12)
9.8 % 
(5)
0.0 %
52 aa 
843 aa 





Methanobacterium phage psiM2 (bpps0)
Viruses
31
3.2 %
(1)
3.2 % 
(1)
6.5 % 
(2)
46.3 %
90 aa 
1186 aa 





Methanothermobacter wolfeii prophage psiM100 (bpps1)
Viruses
37
5.4 %
(2)
10.8 % 
(4)
10.8 % 
(4)
45.7 %
85 aa 
1157 aa 





Bacteriophage PY54 (bppy0)
Viruses
67
7.5 %
(5)
14.9 % 
(10)
9.0 % 
(6)
0.0 %
54 aa 
1330 aa 





Bacteriophage r1t (bpr10)
Viruses
50
16.0 %
(8)
28.0 % 
(14)
14.0 % 
(7)
35.5 %
54 aa 
667 aa 





Mycobacteriophage Rosebush (bpro0)
Viruses
90
6.7 %
(6)
11.1 % 
(10)
12.2 % 
(11)
0.0 %
37 aa 
1882 aa 





Staphylococcus aureus bacteriophage PVL (bpsa0)
Viruses
62
11.3 %
(7)
17.7 % 
(11)
17.7 % 
(11)
33.6 %
43 aa 
759 aa 





Streptococcus thermophilus bacteriophage Sfi11 (bpsf0)
Viruses
25
4.0 %
(1)
8.0 % 
(2)
12.0 % 
(3)
38.6 %
53 aa 
1510 aa 





Bacteriophage sk1 (bpsk0)
Viruses
54
9.3 %
(5)
11.1 % 
(6)
11.1 % 
(6)
34.5 %
39 aa 
999 aa 





Streptococcus mitis phage SM1 (bpsm0)
Viruses
56
3.6 %
(2)
16.1 % 
(9)
8.9 % 
(5)
0.0 %
42 aa 
1062 aa 





Bacteriophage SPBc2 (bpsp1)
Viruses
185
14.1 %
(26)
22.2 % 
(41)
15.1 % 
(28)
34.6 %
21 aa 
2285 aa 





Streptococcus pneumoniae bacteriophage MM1 (bpsp3)
Viruses
53
11.3 %
(6)
17.0 % 
(9)
11.3 % 
(6)
38.4 %
57 aa 
1989 aa 





Streptococcus thermophilus bacteriophage 7201 (bpst2)
Viruses
46
8.7 %
(4)
17.4 % 
(8)
10.9 % 
(5)
38.7 %
47 aa 
1554 aa 





Streptococcus thermophilus bacteriophage DT1 (bpst3)
Viruses
47
4.3 %
(2)
21.3 % 
(10)
4.3 % 
(2)
39.1 %
36 aa 
1278 aa 





Streptococcus thermophilus temperate bacteriophage O1205 (bpst4)
Viruses
57
3.5 %
(2)
14.0 % 
(8)
8.8 % 
(5)
38.3 %
42 aa 
1517 aa 





Streptococcus thermophilus bacteriophage Sfi19 (bpst5)
Viruses
45
6.7 %
(3)
22.2 % 
(10)
8.9 % 
(4)
38.3 %
40 aa 
1626 aa 





Streptococcus thermophilus bacteriophage Sfi21 (bpst6)
Viruses
50
4.0 %
(2)
22.0 % 
(11)
12.0 % 
(6)
37.6 %
48 aa 
1560 aa 





Mycobacteriophage TM4 (bptm0)
Viruses
89
3.4 %
(3)
10.1 % 
(9)
12.4 % 
(11)
68.1 %
29 aa 
1229 aa 





Lactococcus lactis bacteriophage TP901-1 (bptp0)
Viruses
56
14.3 %
(8)
19.6 % 
(11)
7.1 % 
(4)
35.4 %
47 aa 
937 aa 





Bacteriophage Tuc2009 (bptu0)
Viruses
56
17.9 %
(10)
21.4 % 
(12)
8.9 % 
(5)
36.2 %
32 aa 
1025 aa 





Lactococcus lactis bacteriophage ul36 (bpul0)
Viruses
58
10.3 %
(6)
13.8 % 
(8)
13.8 % 
(8)
35.8 %
50 aa 
908 aa 





Bacteriophage VT2-Sa (bpvt0)
Viruses
82
11.0 %
(9)
15.9 % 
(13)
13.4 % 
(11)
49.9 %
42 aa 
2806 aa 





Mycobacterium phage L5 (bpl50)
Viruses
85
12.9 %
(11)
15.3 % 
(13)
7.1 % 
(6)
62.3 %
37 aa 
837 aa 





Phage phi 4795 (bp470)
Viruses
48
12.5 %
(6)
16.7 % 
(8)
14.6 % 
(7)
0.0 %
25 aa 
645 aa 





Bacteriophage 933W (bp930)
Viruses
80
10.0 %
(8)
15.0 % 
(12)
12.5 % 
(10)
49.4 %
51 aa 
2806 aa 





Pseudomonas phage D3 (bpd30)
Viruses
94
9.6 %
(9)
10.6 % 
(10)
12.8 % 
(12)
57.8 %
32 aa 
909 aa 





Bacteriophage D3112 (bpd31)
Viruses
55
5.5 %
(3)
5.5 % 
(3)
10.9 % 
(6)
0.0 %
34 aa 
735 aa 





Enterobacteria phage HK022 (bphk0)
Viruses
57
17.5 %
(10)
22.8 % 
(13)
10.5 % 
(6)
49.5 %
50 aa 
1183 aa 





Bacteriophage HK97 (bphk2)
Viruses
61
16.4 %
(10)
19.7 % 
(12)
11.5 % 
(7)
49.8 %
32 aa 
1296 aa 





bacteriophage lambda (bpla0)
Viruses
66
24.2 %
(16)
27.3 % 
(18)
10.6 % 
(7)
49.9 %
28 aa 
1132 aa 





Bacteriophage N15 (bpn10)
Viruses
60
15.0 %
(9)
26.7 % 
(16)
6.7 % 
(4)
51.2 %
18 aa 
1324 aa 





Bacteriophage P27 (bpp22)
Viruses
58
15.5 %
(9)
25.9 % 
(15)
12.1 % 
(7)
49.4 %
51 aa 
649 aa 





Bacteriophage phi-105 (bpph3)
Viruses
51
9.8 %
(5)
21.6 % 
(11)
11.8 % 
(6)
42.7 %
56 aa 
1018 aa 





Bacteriophage phi-C31 (bpph4)
Viruses
55
9.1 %
(5)
21.8 % 
(12)
14.5 % 
(8)
63.6 %
41 aa 
729 aa 





Bacteriophage phiE125 (bpph6)
Viruses
71
7.0 %
(5)
21.1 % 
(15)
11.3 % 
(8)
61.2 %
43 aa 
1354 aa 





Bacteriophage phi-BT1 (bpphC)
Viruses
55
7.3 %
(4)
18.2 % 
(10)
16.4 % 
(9)
62.8 %
46 aa 
808 aa 





Bacteriophage phi1026b (bpphG)
Viruses
83
9.6 %
(8)
18.1 % 
(15)
12.0 % 
(10)
0.0 %
35 aa 
1354 aa 





Bacteriophage SPP1 (bpsp2)
Viruses
106
8.5 %
(9)
13.2 % 
(14)
23.6 % 
(25)
43.7 %
51 aa 
846 aa 





Stx2 converting bacteriophage I (bpst7)
Viruses
166
4.8 %
(8)
7.8 % 
(13)
17.5 % 
(29)
49.4 %
33 aa 
2806 aa 





Stx1 converting bacteriophage (bpst8)
Viruses
167
5.4 %
(9)
7.8 % 
(13)
16.8 % 
(28)
0.0 %
42 aa 
2806 aa 





Stx2 converting bacteriophage II (bpst9)
Viruses
170
5.9 %
(10)
8.2 % 
(14)
18.2 % 
(31)
0.0 %
41 aa 
2576 aa 





Bacteriophage VWB (bpvw0)
Viruses
61
4.9 %
(3)
9.8 % 
(6)
9.8 % 
(6)
0.0 %
51 aa 
1440 aa 





Enterobacteria phage T1 (bpt10)
Viruses
78
6.4 %
(5)
11.5 % 
(9)
12.8 % 
(10)
0.0 %
36 aa 
1172 aa 





Enterobacteria phage BF23 (bpbf0)
Viruses
8
12.5 %
(1)
12.5 % 
(1)
12.5 % 
(1)
38.5 %
75 aa 
595 aa 





Bacteriophage T5 (bpt50)
Viruses
162
13.6 %
(22)
23.5 % 
(38)
15.4 % 
(25)
0.0 %
27 aa 
1396 aa 





Lactococcus phage c2 (bpc20)
Viruses
39
2.6 %
(1)
2.6 % 
(1)
15.4 % 
(6)
36.3 %
22 aa 
706 aa 





Burkholderia cepacia complex phage BcepC6B (bpbc6)
Viruses
46
21.7 %
(10)
23.9 % 
(11)
13.0 % 
(6)
0.0 %
49 aa 
888 aa 





Burkholderia cepacia phage BcepNazgul (bpbc7)
Viruses
75
4.0 %
(3)
4.0 % 
(3)
12.0 % 
(9)
0.0 %
31 aa 
1270 aa 





Bacteriophage Felix 01 (bpfe0)
Viruses
247
8.1 %
(20)
10.1 % 
(25)
17.0 % 
(42)
0.0 %
37 aa 
909 aa 





Mycoplasma arthritidis bacteriophage MAV1 (bpma0)
Viruses
15
13.3 %
(2)
13.3 % 
(2)
13.3 % 
(2)
0.0 %
91 aa 
766 aa 





Sinorhizobium meliloti phage PBC5 (bppb0)
Viruses
83
3.6 %
(3)
12.0 % 
(10)
12.0 % 
(10)
0.0 %
80 aa 
2849 aa 





Listonella pelagia phage phiHSIC (bpphK)
Viruses
47
8.5 %
(4)
8.5 % 
(4)
10.6 % 
(5)
0.0 %
49 aa 
1069 aa 





Xanthomonas oryzae bacteriophage Xp10 (bpxp0)
Viruses
60
11.7 %
(7)
23.3 % 
(14)
10.0 % 
(6)
0.0 %
50 aa 
1574 aa 





Alteromonas phage PM2 (bppm0)
Viruses
22
0.0 %
(0)
4.5 % 
(1)
31.8 % 
(7)
0.0 %
30 aa 
634 aa 





Enterobacteria phage PRD1 (bppr0)
Viruses
22
36.4 %
(8)
36.4 % 
(8)
36.4 % 
(8)
48.1 %
42 aa 
591 aa 







Ratio of ORFs, whose 3D-structures are predicted


DATE Oct 26 2005

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf 






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.





Aeropyrum pernix K1 (aper0)
Archaea
2694
24.6 %
(662)
32.4 % 
(872)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Sulfolobus solfataricus P2 (ssol0)
Archaea
2994
38.5 %
(1154)
53.4 % 
(1599)
23.8 % 
(712)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii 7 (stok0)
Archaea
2826
38.1 %
(1077)
49.1 % 
(1387)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum IM2 (paer1)
Archaea
2605
34.1 %
(888)
44.8 % 
(1168)
25.9 % 
(674)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus DSM4304 (aful0)
Archaea
2407
45.2 %
(1087)
57.9 % 
(1394)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Methanosarcina acetivorans C2A (mace0)
Archaea
4544
37.4 %
(1698)
52.2 % 
(2373)
27.7 % 
(1260)
42.7 %
41 aa 
4226 aa 





Methanosarcina mazei Goe1 (mmaz0)
Archaea
3371
39.2 %
(1322)
56.2 % 
(1894)
24.1 % 
(812)
41.5 %
16 aa 
1898 aa 





Haloarcula marismortui ATCC 43049 (hmar0)
Archaea
4240
37.2 %
(1576)
48.6 % 
(2062)
24.2 % 
(1028)
61.1 %
30 aa 
2306 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
37.0 %
(964)
50.2 % 
(1309)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Methanothermobacter thermautotrophicus Delta H (mthe0)
Archaea
1869
45.4 %
(848)
59.6 % 
(1113)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanocaldococcus jannaschii DSM2661 (mjan0)
Archaea
1770
42.8 %
(757)
55.6 % 
(985)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanococcus maripaludis S2 (mmar0)
Archaea
1722
48.1 %
(828)
60.3 % 
(1039)
23.4 % 
(403)
33.1 %
32 aa 
2076 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
39.2 %
(661)
52.6 % 
(887)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Pyrococcus abyssi Orsay (paby0)
Archaea
1784
48.9 %
(872)
61.5 % 
(1098)
24.7 % 
(441)
44.7 %
18 aa 
2122 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
45.8 %
(946)
58.5 % 
(1207)
24.8 % 
(513)
40.8 %
21 aa 
1740 aa 





Pyrococcus horikoshii OT3 (phor0)
Archaea
2061
39.8 %
(820)
49.3 % 
(1017)
28.0 % 
(578)
41.9 %
50 aa 
4436 aa 





Thermococcus kodakaraensis KOD1 (tkod0)
Archaea
2306
40.4 %
(932)
52.4 % 
(1208)
27.0 % 
(622)
52.0 %
33 aa 
1798 aa 





Picrophilus torridus DSM 9790 (ptor0)
Archaea
1535
48.9 %
(750)
60.4 % 
(927)
24.0 % 
(368)
36.0 %
24 aa 
1667 aa 





Thermoplasma acidophilum DSM1728 (taci0)
Archaea
1478
50.3 %
(743)
62.5 % 
(924)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium GSS1 (tvol0)
Archaea
1526
49.5 %
(755)
60.2 % 
(918)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Nanoarchaeum equitans Kin4-M (nequ0)
Archaea
536
43.5 %
(233)
54.5 % 
(292)
25.7 % 
(138)
31.6 %
54 aa 
2197 aa 





Corynebacterium diphtheriae NCTC13129 (cdip0)
Bacteria
2272
46.0 %
(1044)
55.9 % 
(1270)
26.2 % 
(596)
53.5 %
31 aa 
2977 aa 





Corynebacterium efficiens YS-314 (ceff0)
Bacteria
2998
42.2 %
(1264)
55.0 % 
(1650)
25.2 % 
(754)
63.0 %
33 aa 
3022 aa 





Corynebacterium glutamicum ATCC 13032 (cglu0)
Bacteria
3099
42.7 %
(1324)
55.2 % 
(1712)
25.6 % 
(793)
53.8 %
33 aa 
2993 aa 





Corynebacterium glutamicum ATCC 13032 (cglu1)
Bacteria
3057
43.5 %
(1329)
56.2 % 
(1719)
26.3 % 
(803)
53.8 %
22 aa 
2996 aa 





Mycobacterium leprae TN (mlep0)
Bacteria
1605
51.3 %
(823)
62.2 % 
(998)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium avium subsp. paratuberculosis str. k10 (mavi0)
Bacteria
4350
48.0 %
(2089)
63.7 % 
(2772)
21.9 % 
(952)
69.3 %
37 aa 
6384 aa 





Mycobacterium tuberculosis H37Rv (mtub0)
Bacteria
3991
42.1 %
(1679)
57.6 % 
(2298)
21.9 % 
(874)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
39.4 %
(1651)
53.2 % 
(2226)
21.3 % 
(890)
65.6 %
30 aa 
4151 aa 





Mycobacterium bovis subsp. bovis AF2122/97 (mbov0)
Bacteria
3920
42.8 %
(1676)
57.6 % 
(2259)
22.0 % 
(861)
65.6 %
26 aa 
4151 aa 





Nocardia farcinica IFM 10152 (nfar0)
Bacteria
5936
40.4 %
(2399)
55.1 % 
(3272)
21.9 % 
(1302)
70.7 %
34 aa 
14474 aa 





Leifsonia xyli subsp. xyli str. CTCB07 (lxyl0)
Bacteria
2030
44.6 %
(905)
58.7 % 
(1192)
24.9 % 
(506)
67.7 %
20 aa 
1980 aa 





Propionibacterium acnes KPA171202 (pacn0)
Bacteria
2297
48.1 %
(1106)
60.4 % 
(1387)
26.2 % 
(601)
60.0 %
33 aa 
2117 aa 





Streptomyces avermitilis (save0)
Bacteria
7673
40.2 %
(3081)
57.1 % 
(4382)
22.9 % 
(1759)
70.7 %
33 aa 
7746 aa 





Streptomyces coelicolor A3(2) (scoe0)
Bacteria
8154
39.1 %
(3192)
55.8 % 
(4551)
22.6 % 
(1843)
72.0 %
19 aa 
7463 aa 





Bifidobacterium longum NCC2705 (blon0)
Bacteria
1729
51.1 %
(883)
63.6 % 
(1099)
25.0 % 
(432)
60.1 %
15 aa 
3172 aa 





Symbiobacterium thermophilum IAM 14863 (symb0)
Bacteria
3337
45.3 %
(1511)
59.4 % 
(1981)
27.9 % 
(932)
68.7 %
30 aa 
2244 aa 





Tropheryma whipplei TW08/27 (twhi0)
Bacteria
783
58.6 %
(459)
67.8 % 
(531)
30.5 % 
(239)
46.3 %
29 aa 
2308 aa 





Tropheryma whipplei str. Twist (twhi1)
Bacteria
808
57.1 %
(461)
66.1 % 
(534)
32.1 % 
(259)
46.3 %
39 aa 
2312 aa 





Aquifex aeolicus VF5 (aaeo0)
Bacteria
1553
56.1 %
(872)
67.6 % 
(1050)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Bacteroides fragilis NCTC 9343 (bfra1)
Bacteria
4236
37.3 %
(1580)
54.1 % 
(2293)
32.2 % 
(1365)
43.1 %
30 aa 
1957 aa 





Bacteroides thetaiotaomicron VPI-5482 (bthe0)
Bacteria
4816
37.8 %
(1820)
57.3 % 
(2758)
32.4 % 
(1561)
42.8 %
32 aa 
2183 aa 





Bacteroides fragilis YCH46 (bfra0)
Bacteria
4625
35.1 %
(1625)
50.8 % 
(2351)
31.2 % 
(1445)
43.2 %
38 aa 
1957 aa 





Porphyromonas gingivalis W83 (pgin0)
Bacteria
1909
41.5 %
(792)
55.7 % 
(1064)
27.0 % 
(516)
48.3 %
30 aa 
2316 aa 





Chlamydia muridarum Nigg (cmur0)
Bacteria
911
48.5 %
(442)
58.8 % 
(536)
27.1 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis D/UW-3/CX (ctra0)
Bacteria
894
49.8 %
(445)
59.4 % 
(531)
27.2 % 
(243)
41.3 %
45 aa 
1786 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1116
40.2 %
(449)
49.8 % 
(556)
31.4 % 
(350)
40.6 %
30 aa 
1826 aa 





Chlamydophila caviae GPIC (ccav0)
Bacteria
1005
46.0 %
(462)
56.6 % 
(569)
30.5 % 
(307)
39.2 %
30 aa 
3346 aa 





Chlamydophila pneumoniae CWL029 (cpne1)
Bacteria
1052
42.9 %
(451)
52.9 % 
(556)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
42.4 %
(453)
52.8 % 
(564)
31.2 % 
(333)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae TW-183 (cpne3)
Bacteria
1113
40.9 %
(455)
50.9 % 
(567)
30.6 % 
(341)
40.6 %
33 aa 
1826 aa 





Parachlamydia sp. UWE25 (para0)
Bacteria
2031
39.1 %
(795)
48.7 % 
(989)
25.9 % 
(526)
34.7 %
45 aa 
3181 aa 





Chlorobium tepidum TLS (ctep0)
Bacteria
2252
45.6 %
(1027)
56.7 % 
(1278)
21.4 % 
(483)
56.5 %
30 aa 
1510 aa 





Dehalococcoides ethenogenes 195 (deth0)
Bacteria
1580
48.7 %
(770)
60.1 % 
(949)
22.8 % 
(361)
48.9 %
30 aa 
1834 aa 





Gloeobacter violaceus PCC 7421 (gvio0)
Bacteria
4430
41.4 %
(1832)
57.9 % 
(2567)
24.1 % 
(1066)
62.0 %
28 aa 
3277 aa 





Synechococcus sp. WH 8102 (syne1)
Bacteria
2517
41.5 %
(1045)
54.6 % 
(1374)
21.6 % 
(543)
59.4 %
31 aa 
10791 aa 





Synechocystis sp. PCC 6803 (syne0)
Bacteria
3569
41.9 %
(1496)
56.4 % 
(2013)
25.2 % 
(901)
47.4 %
29 aa 
4199 aa 





Thermosynechococcus elongatus BP-1 (telo0)
Bacteria
2475
45.5 %
(1125)
60.6 % 
(1500)
26.5 % 
(656)
53.9 %
29 aa 
1706 aa 





Nostoc sp. PCC 7120 (anab0)
Bacteria
6132
37.7 %
(2311)
52.4 % 
(3213)
25.6 % 
(1567)
41.3 %
17 aa 
4936 aa 





Prochlorococcus marinus MED4 (pmar0)
Bacteria
1712
48.2 %
(825)
60.2 % 
(1030)
25.9 % 
(444)
30.8 %
32 aa 
1521 aa 





Prochlorococcus marinus MIT9313 (pmar1)
Bacteria
2265
42.6 %
(965)
54.8 % 
(1241)
24.6 % 
(558)
50.7 %
33 aa 
1765 aa 





Prochlorococcus marinus marinus CCMP1375 (pmar2)
Bacteria
1882
44.6 %
(839)
55.2 % 
(1038)
25.4 % 
(478)
36.4 %
30 aa 
1524 aa 





Deinococcus radiodurans R1 (drad0)
Bacteria
3102
44.0 %
(1364)
57.8 % 
(1792)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Thermus thermophilus HB27 (tthe0)
Bacteria
2210
51.4 %
(1137)
64.3 % 
(1422)
23.5 % 
(519)
69.4 %
27 aa 
2672 aa 





Thermus thermophilus HB8 (tthe1)
Bacteria
2246
51.1 %
(1148)
63.9 % 
(1435)
22.8 % 
(511)
69.5 %
11 aa 
2672 aa 





Bacillus halodurans C-125 (bhal0)
Bacteria
4066
47.2 %
(1919)
59.0 % 
(2400)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus licheniformis DSM 13 (blic0)
Bacteria
4196
48.1 %
(2018)
59.4 % 
(2493)
29.4 % 
(1234)
46.2 %
24 aa 
3588 aa 





Bacillus licheniformis ATCC 14580 (blic1)
Bacteria
4152
47.9 %
(1990)
59.2 % 
(2459)
29.5 % 
(1223)
46.2 %
26 aa 
3588 aa 





Bacillus anthracis str. Ames (bant0)
Bacteria
5311
41.0 %
(2176)
52.0 % 
(2760)
31.4 % 
(1666)
35.4 %
28 aa 
5017 aa 





Bacillus anthracis str. Ames 0581 (bant1)
Bacteria
5617
39.2 %
(2204)
50.2 % 
(2819)
31.3 % 
(1759)
35.4 %
28 aa 
5017 aa 





Bacillus anthracis str. Sterne (bant2)
Bacteria
5513
42.4 %
(2335)
54.3 % 
(2991)
31.8 % 
(1752)
35.4 %
35 aa 
5017 aa 





Bacillus cereus ATCC 14579 (bcer0)
Bacteria
5255
42.5 %
(2233)
54.0 % 
(2838)
30.2 % 
(1586)
35.3 %
18 aa 
5017 aa 





Bacillus cereus ATCC 10987 (bcer1)
Bacteria
5844
39.8 %
(2325)
51.0 % 
(2981)
31.3 % 
(1829)
35.5 %
30 aa 
3242 aa 





Bacillus cereus ZK (bcer2)
Bacteria
5134
44.7 %
(2297)
56.5 % 
(2901)
32.2 % 
(1652)
35.4 %
44 aa 
5017 aa 





Bacillus thuringiensis serovar konkukian str. 97-27 (bthu0)
Bacteria
5197
43.7 %
(2273)
55.3 % 
(2876)
32.1 % 
(1667)
35.4 %
48 aa 
5017 aa 





Bacillus clausii KSM-K16 (bcla0)
Bacteria
4108
49.9 %
(2050)
62.2 % 
(2556)
27.8 % 
(1141)
44.8 %
26 aa 
2870 aa 





Bacillus subtilis 168 (bsub0)
Bacteria
4106
47.5 %
(1950)
58.6 % 
(2405)
29.3 % 
(1202)
43.5 %
20 aa 
5488 aa 





Geobacillus kaustophilus HTA426 (gkau0)
Bacteria
3540
45.8 %
(1621)
57.3 % 
(2028)
25.8 % 
(912)
52.0 %
23 aa 
2301 aa 





Oceanobacillus iheyensis HTE831 (oihe0)
Bacteria
3496
49.3 %
(1725)
61.2 % 
(2141)
32.2 % 
(1127)
35.7 %
24 aa 
2373 aa 





Listeria innocua Clip11262 (linn0)
Bacteria
3043
48.4 %
(1473)
60.5 % 
(1841)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
52.5 %
(1494)
64.5 % 
(1836)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Listeria monocytogenes str. 4b F2365 (lmon1)
Bacteria
2821
51.9 %
(1465)
64.0 % 
(1805)
29.1 % 
(820)
38.0 %
28 aa 
2195 aa 





Staphylococcus aureus Mu50 (saur0)
Bacteria
2733
48.7 %
(1330)
58.7 % 
(1605)
27.6 % 
(754)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus N315 (saur1)
Bacteria
2624
51.0 %
(1338)
61.1 % 
(1603)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus MW2 (saur2)
Bacteria
2659
48.9 %
(1300)
58.9 % 
(1567)
28.4 % 
(756)
32.8 %
18 aa 
9904 aa 





Staphylococcus aureus subsp. aureus COL (saur5)
Bacteria
2618
48.5 %
(1271)
58.4 % 
(1529)
27.2 % 
(713)
32.8 %
21 aa 
10498 aa 





Staphylococcus epidermidis ATCC 12228 (sepi0)
Bacteria
2485
48.1 %
(1195)
58.1 % 
(1445)
26.8 % 
(666)
32.0 %
25 aa 
9439 aa 





Staphylococcus epidermidis RP62A (sepi1)
Bacteria
2526
47.5 %
(1201)
57.7 % 
(1458)
25.9 % 
(655)
32.1 %
19 aa 
10203 aa 





Staphylococcus aureus subsp. aureus MRSA252 (saur3)
Bacteria
2656
48.8 %
(1297)
59.5 % 
(1579)
27.7 % 
(737)
32.8 %
16 aa 
10746 aa 





Staphylococcus aureus subsp. aureus MSSA476 (saur4)
Bacteria
2598
49.4 %
(1284)
59.3 % 
(1541)
28.5 % 
(741)
32.8 %
16 aa 
2391 aa 





Clostridium acetobutylicum ATCC824 (cace0)
Bacteria
3848
47.2 %
(1818)
59.7 % 
(2296)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium perfringens 13 (cper0)
Bacteria
2723
49.0 %
(1335)
60.4 % 
(1644)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Clostridium tetani E88 (ctet0)
Bacteria
2432
48.6 %
(1182)
61.5 % 
(1496)
30.3 % 
(738)
28.6 %
71 aa 
2838 aa 





Thermoanaerobacter tengcongensis MB4T (tten0)
Bacteria
2588
49.8 %
(1290)
62.1 % 
(1607)
27.6 % 
(715)
37.6 %
37 aa 
2862 aa 





Enterococcus faecalis V583 (efae0)
Bacteria
3265
41.8 %
(1365)
53.5 % 
(1746)
27.7 % 
(906)
37.4 %
22 aa 
3173 aa 





Lactobacillus acidophilus NCFM (laci0)
Bacteria
1864
50.4 %
(940)
62.2 % 
(1159)
27.5 % 
(513)
34.7 %
27 aa 
4326 aa 





Lactobacillus johnsonii NCC 533 (ljoh0)
Bacteria
1821
49.5 %
(902)
61.0 % 
(1111)
29.0 % 
(529)
34.6 %
38 aa 
4734 aa 





Lactobacillus plantarum WCFS1 (lpla0)
Bacteria
3059
46.9 %
(1436)
60.1 % 
(1837)
27.9 % 
(854)
44.5 %
24 aa 
5289 aa 





Lactococcus lactis IL1403 (llac0)
Bacteria
2266
48.1 %
(1089)
60.9 % 
(1380)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus agalactiae (saga0)
Bacteria
2124
47.8 %
(1015)
60.1 % 
(1276)
26.8 % 
(570)
35.6 %
23 aa 
2274 aa 





Streptococcus agalactiae NEM316 (saga1)
Bacteria
2094
49.5 %
(1036)
61.1 % 
(1280)
28.8 % 
(603)
35.6 %
30 aa 
2066 aa 





Streptococcus mutans UA159 (smut0)
Bacteria
1960
50.9 %
(997)
63.1 % 
(1237)
27.3 % 
(535)
36.8 %
25 aa 
2724 aa 





Streptococcus pneumoniae R6 (spne0)
Bacteria
2094
47.2 %
(988)
58.9 % 
(1234)
25.4 % 
(531)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae TIGR4 (spne1)
Bacteria
2043
49.2 %
(1006)
61.5 % 
(1257)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes SF370 (spyo0)
Bacteria
1696
49.7 %
(843)
63.1 % 
(1070)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
47.3 %
(873)
61.4 % 
(1133)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Streptococcus pyogenes MGAS315 (spyo2)
Bacteria
1865
46.3 %
(864)
59.8 % 
(1115)
23.0 % 
(429)
38.6 %
38 aa 
1622 aa 





Streptococcus pyogenes SSI-1 (spyo3)
Bacteria
1861
45.9 %
(854)
59.2 % 
(1101)
22.9 % 
(426)
38.6 %
27 aa 
1623 aa 





Streptococcus pyogenes MGAS10394 (spyo4)
Bacteria
1886
46.2 %
(871)
60.2 % 
(1135)
23.8 % 
(448)
38.7 %
30 aa 
1648 aa 





Streptococcus thermophilus CNRZ1066 (sthe0)
Bacteria
1915
47.8 %
(915)
59.6 % 
(1141)
24.1 % 
(462)
39.1 %
20 aa 
1464 aa 





Streptococcus thermophilus LMG 18311 (sthe1)
Bacteria
1889
47.8 %
(902)
59.7 % 
(1127)
24.7 % 
(466)
39.1 %
30 aa 
1470 aa 





Onion yellows phytoplasma OY-M (past0)
Bacteria
754
50.5 %
(381)
58.2 % 
(439)
28.2 % 
(213)
27.7 %
33 aa 
1571 aa 





Mesoplasma florum L1 (mflo0)
Bacteria
683
56.8 %
(388)
66.5 % 
(454)
24.5 % 
(167)
27.0 %
37 aa 
1814 aa 





Mycoplasma gallisepticum R (mgal0)
Bacteria
726
49.7 %
(361)
61.6 % 
(447)
25.1 % 
(182)
31.5 %
37 aa 
1976 aa 





Mycoplasma genitalium G37 (mgen0)
Bacteria
480
57.7 %
(277)
70.2 % 
(337)
23.1 % 
(111)
31.7 %
37 aa 
1805 aa 





Mycoplasma hyopneumoniae 232 (mhyo0)
Bacteria
691
46.7 %
(323)
55.0 % 
(380)
30.1 % 
(208)
28.6 %
46 aa 
3969 aa 





Mycoplasma mobile 163K (mmob0)
Bacteria
633
51.2 %
(324)
60.8 % 
(385)
23.4 % 
(148)
25.0 %
38 aa 
4727 aa 





Mycoplasma penetrans (mpen0)
Bacteria
1037
41.9 %
(435)
49.8 % 
(516)
27.9 % 
(289)
25.7 %
47 aa 
3317 aa 





Mycoplasma pneumoniae M129 (mpne0)
Bacteria
688
45.1 %
(310)
52.5 % 
(361)
23.0 % 
(158)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis UAB CTIP (mpul0)
Bacteria
782
46.9 %
(367)
55.9 % 
(437)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Mycoplasma mycoides subsp. mycoides SC (mmyc0)
Bacteria
1016
40.4 %
(410)
54.6 % 
(555)
28.1 % 
(286)
24.0 %
36 aa 
1972 aa 





Ureaplasma urealyticum (uure0)
Bacteria
611
46.6 %
(285)
54.2 % 
(331)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Fusobacterium nucleatum ATCC 25586 (fnuc0)
Bacteria
2067
44.6 %
(921)
56.1 % 
(1160)
25.8 % 
(534)
27.2 %
20 aa 
3165 aa 





Pirellula sp. 1 (rbal0)
Bacteria
7325
26.8 %
(1960)
38.2 % 
(2799)
23.0 % 
(1685)
55.4 %
35 aa 
8173 aa 





Caulobacter crescentus (ccre0)
Bacteria
3737
47.0 %
(1756)
61.3 % 
(2289)
22.9 % 
(854)
67.2 %
30 aa 
2479 aa 





Bartonella henselae Houston-1 (bhen0)
Bacteria
1488
46.6 %
(694)
59.3 % 
(882)
26.2 % 
(390)
38.2 %
41 aa 
3036 aa 





Bartonella quintana Toulouse (bqui0)
Bacteria
1142
56.8 %
(649)
69.1 % 
(789)
28.6 % 
(327)
38.8 %
41 aa 
2855 aa 





Bradyrhizobium japonicum (bjap0)
Bacteria
8317
43.8 %
(3641)
59.5 % 
(4949)
24.7 % 
(2052)
64.1 %
30 aa 
5685 aa 





Rhodopseudomonas palustris (rpal0)
Bacteria
4822
48.3 %
(2330)
63.7 % 
(3074)
26.2 % 
(1264)
65.0 %
25 aa 
4335 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
48.5 %
(1552)
62.4 % 
(1997)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Brucella suis 1330 (bsui0)
Bacteria
3271
44.9 %
(1470)
57.5 % 
(1882)
23.5 % 
(768)
57.3 %
29 aa 
3420 aa 





Mesorhizobium loti MAFF303099 (mlot0)
Bacteria
7281
42.8 %
(3118)
58.5 % 
(4256)
22.7 % 
(1650)
62.5 %
30 aa 
3930 aa 





Agrobacterium tumefaciens C58 (atum0)
Bacteria
5301
47.5 %
(2518)
63.7 % 
(3377)
23.8 % 
(1263)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens C58 (Dupont) (atum1)
Bacteria
5402
47.0 %
(2538)
62.6 % 
(3381)
23.1 % 
(1246)
59.0 %
22 aa 
2831 aa 





Sinorhizobium meliloti 1021 (smel0)
Bacteria
6205
46.7 %
(2895)
63.1 % 
(3915)
23.8 % 
(1478)
62.2 %
31 aa 
2832 aa 





Silicibacter pomeroyi DSS-3 (spom1)
Bacteria
4252
49.1 %
(2089)
65.3 % 
(2778)
23.9 % 
(1017)
64.1 %
30 aa 
8093 aa 





Gluconobacter oxydans 621H (goxy0)
Bacteria
2664
44.3 %
(1180)
58.8 % 
(1566)
20.0 % 
(532)
60.8 %
26 aa 
1750 aa 





Anaplasma marginale str. St. Maries (amar0)
Bacteria
949
50.6 %
(480)
61.3 % 
(582)
33.2 % 
(315)
49.8 %
39 aa 
3492 aa 





Ehrlichia ruminantium Welgevonden(ARC-OVI) (erum0)
Bacteria
888
51.9 %
(461)
63.6 % 
(565)
34.3 % 
(305)
27.5 %
42 aa 
3715 aa 





Ehrlichia ruminantium str. Welgevonden(CIRAD) (erum1)
Bacteria
958
49.0 %
(469)
60.3 % 
(578)
35.8 % 
(343)
27.5 %
42 aa 
3558 aa 





Ehrlichia ruminantium str. Gardel (erum2)
Bacteria
950
49.1 %
(466)
60.2 % 
(572)
35.5 % 
(337)
27.5 %
42 aa 
3448 aa 





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
37.8 %
(520)
47.8 % 
(657)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia prowazekii Madrid E (rpro0)
Bacteria
834
55.2 %
(460)
67.6 % 
(564)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Rickettsia typhi str. Wilmington (rtyp0)
Bacteria
838
54.7 %
(458)
66.0 % 
(553)
32.6 % 
(273)
28.9 %
24 aa 
2331 aa 





Wolbachia endosymbiont of Drosophila melanogaster (wend0)
Bacteria
1195
42.1 %
(503)
50.1 % 
(599)
24.7 % 
(295)
35.2 %
30 aa 
2843 aa 





Wolbachia endosymbiont strain TRS of Brugia malayi (wend1)
Bacteria
805
52.9 %
(426)
61.5 % 
(495)
25.8 % 
(208)
34.2 %
42 aa 
2839 aa 





Zymomonas mobilis subsp. mobilis ZM4 (zmob0)
Bacteria
2041
47.5 %
(970)
58.2 % 
(1188)
20.4 % 
(416)
46.3 %
30 aa 
2984 aa 





Bordetella bronchiseptica RB50 (bbro0)
Bacteria
4994
48.9 %
(2444)
68.4 % 
(3418)
22.9 % 
(1146)
68.1 %
31 aa 
4218 aa 





Bordetella parapertussis (bpar0)
Bacteria
4185
50.7 %
(2122)
70.5 % 
(2949)
23.3 % 
(975)
68.1 %
37 aa 
4218 aa 





Bordetella pertussis Tohama I (bper0)
Bacteria
3447
48.6 %
(1676)
72.2 % 
(2490)
22.2 % 
(766)
67.7 %
37 aa 
4196 aa 





Burkholderia mallei ATCC 23344 (bmal0)
Bacteria
4764
46.9 %
(2236)
61.0 % 
(2907)
20.8 % 
(993)
68.5 %
30 aa 
3328 aa 





Burkholderia pseudomallei K96243 (bpse0)
Bacteria
5729
46.1 %
(2642)
61.4 % 
(3517)
24.5 % 
(1406)
68.1 %
30 aa 
6274 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5116
44.5 %
(2275)
59.6 % 
(3048)
25.0 % 
(1279)
67.0 %
20 aa 
6889 aa 





Chromobacterium violaceum ATCC 12472 (cvio0)
Bacteria
4407
45.5 %
(2003)
60.2 % 
(2654)
24.7 % 
(1087)
64.8 %
37 aa 
4130 aa 





Neisseria gonorrhoeae FA 1090 (ngon0)
Bacteria
2002
44.5 %
(891)
55.1 % 
(1104)
21.0 % 
(421)
52.7 %
36 aa 
1977 aa 





Neisseria meningitidis MC58 (nmen0)
Bacteria
2025
46.6 %
(943)
57.0 % 
(1154)
23.2 % 
(470)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
45.6 %
(941)
55.9 % 
(1155)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Nitrosomonas europaea ATCC 19718 (neur0)
Bacteria
2461
47.4 %
(1166)
63.9 % 
(1573)
25.8 % 
(636)
50.7 %
42 aa 
3064 aa 





Azoarcus sp. EbN1 (azoa0)
Bacteria
4603
38.7 %
(1780)
53.5 % 
(2462)
20.6 % 
(950)
64.7 %
14 aa 
2043 aa 





Bdellovibrio bacteriovorus HD100 (bbac0)
Bacteria
3583
39.2 %
(1405)
50.8 % 
(1821)
29.3 % 
(1050)
50.6 %
30 aa 
2828 aa 





Desulfotalea psychrophila LSv54 (dpsy0)
Bacteria
3236
42.9 %
(1389)
56.1 % 
(1814)
29.8 % 
(964)
46.6 %
31 aa 
4725 aa 





Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough (dvul0)
Bacteria
3531
41.0 %
(1448)
53.5 % 
(1890)
23.3 % 
(822)
63.3 %
18 aa 
3038 aa 





Geobacter sulfurreducens PCA (gsul0)
Bacteria
3446
48.3 %
(1663)
61.2 % 
(2110)
28.4 % 
(979)
60.9 %
30 aa 
5899 aa 





Campylobacter jejuni  (cjej0)
Bacteria
1634
51.2 %
(837)
62.2 % 
(1016)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Campylobacter jejuni RM1221 (cjej1)
Bacteria
1838
45.0 %
(828)
55.2 % 
(1014)
26.1 % 
(480)
30.3 %
30 aa 
1899 aa 





Helicobacter hepaticus ATCC 51449 (hhep0)
Bacteria
1875
42.6 %
(799)
53.5 % 
(1003)
28.5 % 
(535)
35.9 %
30 aa 
2894 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
41.4 %
(648)
52.7 % 
(825)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
44.5 %
(663)
55.0 % 
(820)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Wolinella succinogenes DSMZ 1740 (wsuc0)
Bacteria
2044
50.5 %
(1032)
65.1 % 
(1331)
28.5 % 
(583)
48.5 %
33 aa 
2883 aa 





Shewanella oneidensis MR-1 (sone0)
Bacteria
4778
39.9 %
(1907)
53.6 % 
(2563)
25.5 % 
(1220)
45.9 %
30 aa 
5020 aa 





Idiomarina loihiensis L2TR (iloi0)
Bacteria
2628
52.0 %
(1366)
65.4 % 
(1719)
28.6 % 
(751)
47.0 %
34 aa 
1615 aa 





Buchnera aphidicola Sg (baph0)
Bacteria
552
76.3 %
(421)
84.4 % 
(466)
17.0 % 
(94)
25.3 %
38 aa 
1413 aa 





Buchnera aphidicola (Baizongia pistaciae) (baph1)
Bacteria
507
77.7 %
(394)
85.0 % 
(431)
18.5 % 
(94)
25.3 %
38 aa 
1404 aa 





Buchnera sp. APS (buch0)
Bacteria
574
77.7 %
(446)
85.7 % 
(492)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli K-12 MG1655 (ecol0)
Bacteria
4285
50.6 %
(2170)
63.2 % 
(2707)
27.3 % 
(1169)
50.7 %
14 aa 
2358 aa 





Escherichia coli O157:H7  (ecol1)
Bacteria
5447
42.5 %
(2315)
54.6 % 
(2972)
24.0 % 
(1309)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 EDL933 (ecol2)
Bacteria
5449
42.5 %
(2318)
54.9 % 
(2990)
24.3 % 
(1323)
50.4 %
9 aa 
5188 aa 





Escherichia coli CFT073 (ecol3)
Bacteria
5379
42.7 %
(2296)
53.4 % 
(2873)
25.1 % 
(1351)
50.5 %
14 aa 
3216 aa 





Erwinia carotovora subsp. atroseptica SCRI1043 (ecar0)
Bacteria
4472
48.9 %
(2187)
62.4 % 
(2789)
26.7 % 
(1195)
51.0 %
31 aa 
7523 aa 





Photorhabdus luminescens laumondii TTO1 (plum0)
Bacteria
4683
40.7 %
(1905)
55.5 % 
(2600)
20.9 % 
(981)
42.8 %
30 aa 
16367 aa 





Salmonella Typhi CT18 (styp0)
Bacteria
4766
44.2 %
(2107)
55.8 % 
(2659)
25.8 % 
(1230)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4554
48.4 %
(2206)
61.0 % 
(2780)
27.2 % 
(1239)
52.2 %
14 aa 
5559 aa 





Salmonella enterica subsp. enterica serovar Typhi Ty2 (styp2)
Bacteria
4323
47.3 %
(2045)
59.2 % 
(2559)
26.7 % 
(1153)
52.1 %
13 aa 
3624 aa 





Salmonella enterica subsp. enterica serovar Paratypi A str. ATCC 9150 (styp3)
Bacteria
4093
49.5 %
(2026)
61.9 % 
(2534)
27.5 % 
(1125)
52.2 %
21 aa 
4560 aa 





Shigella flexneri 2a 301 (sfle0)
Bacteria
4454
43.5 %
(1937)
56.9 % 
(2534)
25.4 % 
(1132)
50.7 %
13 aa 
1522 aa 





Shigella flexneri 2a str. 2457T (sfle1)
Bacteria
4068
45.7 %
(1858)
58.4 % 
(2374)
25.6 % 
(1043)
50.9 %
14 aa 
1522 aa 





Wigglesworthia brevipalpis (wbre0)
Bacteria
617
72.8 %
(449)
80.7 % 
(498)
24.1 % 
(149)
22.5 %
38 aa 
1405 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4083
45.1 %
(1842)
59.2 % 
(2418)
25.8 % 
(1054)
47.6 %
14 aa 
3705 aa 





Yersinia pestis KIM (ypes1)
Bacteria
4281
43.5 %
(1862)
56.6 % 
(2424)
25.8 % 
(1105)
47.7 %
14 aa 
3710 aa 





Yersinia pestis biovar Mediaevails str. 91001 (ypes2)
Bacteria
4142
45.0 %
(1864)
58.5 % 
(2424)
26.4 % 
(1092)
47.7 %
20 aa 
3710 aa 





Yersinia pseudotuberculosis IP 32953 (ypes3)
Bacteria
4038
47.7 %
(1928)
60.0 % 
(2422)
26.8 % 
(1082)
47.6 %
14 aa 
5623 aa 





Candidatus Blochmannia floridanus (bflo0)
Bacteria
583
76.0 %
(443)
83.9 % 
(489)
23.0 % 
(134)
27.4 %
38 aa 
1420 aa 





Coxiella burnetii RSA 493 (cbur0)
Bacteria
2046
40.4 %
(827)
50.4 % 
(1032)
23.4 % 
(479)
42.6 %
30 aa 
1734 aa 





Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (lpne2)
Bacteria
2942
44.9 %
(1320)
58.4 % 
(1718)
29.0 % 
(854)
38.3 %
34 aa 
3780 aa 





Legionella pneumophila str. Lens (lpne0)
Bacteria
2934
43.9 %
(1289)
57.9 % 
(1699)
28.5 % 
(836)
38.4 %
34 aa 
7919 aa 





Legionella pneumophila str. Paris (lpne1)
Bacteria
3166
43.3 %
(1370)
56.9 % 
(1802)
28.6 % 
(904)
38.3 %
23 aa 
7679 aa 





Methylococcus capsulatus str. Bath (mcap0)
Bacteria
2959
47.9 %
(1418)
61.0 % 
(1804)
24.1 % 
(713)
63.6 %
24 aa 
3349 aa 





Haemophilus ducreyi 35000HP (hduc0)
Bacteria
1717
47.6 %
(818)
56.0 % 
(961)
24.9 % 
(427)
38.2 %
30 aa 
4919 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
58.0 %
(991)
67.9 % 
(1161)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Mannheimia succiniciproducens MBEL55E (msuc0)
Bacteria
2384
49.9 %
(1189)
60.8 % 
(1450)
24.1 % 
(574)
42.5 %
30 aa 
5399 aa 





Pasteurella multocida PM70 (pmul0)
Bacteria
2014
56.8 %
(1143)
68.6 % 
(1382)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Acinetobacter sp. ADP1 (acin0)
Bacteria
3325
48.2 %
(1604)
61.3 % 
(2037)
25.3 % 
(841)
40.4 %
23 aa 
3711 aa 





Pseudomonas aeruginosa PAO1 (paer0)
Bacteria
5566
49.3 %
(2744)
64.9 % 
(3611)
26.8 % 
(1491)
66.6 %
10 aa 
5627 aa 





Pseudomonas putida KT2440 (pput0)
Bacteria
5350
47.7 %
(2553)
62.9 % 
(3363)
25.3 % 
(1356)
61.5 %
23 aa 
8682 aa 





Pseudomonas syringae pv. tomato str. DC3000 (psyr0)
Bacteria
5608
43.6 %
(2445)
59.1 % 
(3313)
23.8 % 
(1337)
58.3 %
24 aa 
6274 aa 





Francisella tularensis subsp. tularensis (ftul0)
Bacteria
1603
47.9 %
(768)
60.2 % 
(965)
29.8 % 
(478)
32.3 %
32 aa 
1422 aa 





Photobacterium profundum ss9 (ppro0)
Bacteria
5480
42.7 %
(2340)
58.5 % 
(3205)
26.9 % 
(1475)
41.7 %
35 aa 
4684 aa 





Vibrio cholerae N16961 (vcho0)
Bacteria
3828
46.3 %
(1773)
58.5 % 
(2240)
27.4 % 
(1049)
47.5 %
26 aa 
4558 aa 





Vibrio fischeri ES114 (vfis0)
Bacteria
3802
50.2 %
(1909)
62.5 % 
(2376)
28.2 % 
(1071)
38.4 %
21 aa 
3971 aa 





Vibrio parahaemolyticus RIMD 2210633 (vpar0)
Bacteria
4832
45.6 %
(2205)
58.4 % 
(2822)
27.2 % 
(1316)
45.4 %
14 aa 
6084 aa 





Vibrio vulnificus CMCP6 (vvul0)
Bacteria
4537
47.5 %
(2153)
61.8 % 
(2804)
25.6 % 
(1161)
46.7 %
20 aa 
5206 aa 





Vibrio vulnificus YJ016 (vvul1)
Bacteria
5028
43.5 %
(2188)
56.5 % 
(2842)
26.7 % 
(1341)
46.7 %
34 aa 
5206 aa 





Xanthomonas axonopodis pv. citri 306 (xaxo0)
Bacteria
4427
45.5 %
(2016)
59.9 % 
(2652)
24.8 % 
(1100)
64.7 %
30 aa 
4753 aa 





Xanthomonas campestris pv. campestris ATCC 33913 (xcam0)
Bacteria
4181
47.1 %
(1970)
61.2 % 
(2557)
25.3 % 
(1056)
65.1 %
21 aa 
3961 aa 





Xanthomonas oryzae pv. oryzae KACC10331 (xory0)
Bacteria
4637
36.5 %
(1694)
50.6 % 
(2347)
21.0 % 
(975)
63.7 %
30 aa 
2941 aa 





Xylella fastidiosa 9a5c (xfas0)
Bacteria
2832
36.3 %
(1028)
46.3 % 
(1312)
24.7 % 
(700)
52.6 %
30 aa 
3455 aa 





Xylella fastidiosa Temecula1 (xfas1)
Bacteria
2036
48.5 %
(988)
59.8 % 
(1217)
25.6 % 
(522)
51.8 %
30 aa 
3457 aa 





Leptospira interrogans serovar lai str. 56601 (lint0)
Bacteria
4725
29.6 %
(1400)
41.3 % 
(1950)
26.6 % 
(1255)
35.0 %
30 aa 
3141 aa 





Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 (lint1)
Bacteria
3658
37.9 %
(1387)
51.4 % 
(1881)
31.5 % 
(1152)
35.0 %
37 aa 
3140 aa 





Borrelia burgdorferi (bbur0)
Bacteria
1653
29.1 %
(481)
35.8 % 
(591)
27.9 % 
(462)
28.2 %
30 aa 
2166 aa 





Borrelia garinii PBi (bgar0)
Bacteria
1270
36.5 %
(464)
42.9 % 
(545)
26.7 % 
(339)
28.3 %
14 aa 
2162 aa 





Treponema denticola ATCC 35405 (tden0)
Bacteria
2767
37.2 %
(1028)
48.4 % 
(1339)
32.4 % 
(897)
37.9 %
30 aa 
3320 aa 





Treponema pallidum subsp. pallidum str. Nichols (tpal0)
Bacteria
1031
45.8 %
(472)
56.0 % 
(577)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima MSB8 (tmar0)
Bacteria
1846
54.8 %
(1011)
66.3 % 
(1224)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Cryptosporidium hominis (chom0)
Eukaryota
3934
29.6 %
(1164)
37.7 % 
(1483)
25.4 % 
(998)
0.0 %
9 aa 
4725 aa 





Plasmodium falciparum 3D7 (pfal0)
Eukaryota
5271
30.4 %
(1602)
42.7 % 
(2250)
35.2 % 
(1856)
20.4 %
13 aa 
10589 aa 





Plasmodium yoelii yoelii (pyoe0)
Eukaryota
7861
19.9 %
(1563)
40.8 % 
(3211)
33.2 % 
(2612)
0.0 %
1 aa 
6636 aa 





Thalassiosira pseudonana CCMP1335 (tpse0)
Eukaryota
11397
42.8 %
(4874)
50.4 % 
(5740)
13.1 % 
(1496)
0.0 %
25 aa 
4697 aa 





Guillardia theta Nucleomorph (gthe0)
Eukaryota
632
47.3 %
(299)
53.0 % 
(335)
23.9 % 
(151)
26.4 %
29 aa 
2057 aa 





Giardia lamblia ATCC 50803 (gint0)
Eukaryota
9649
19.0 %
(1836)
23.3 % 
(2244)
19.7 % 
(1902)
0.0 %
33 aa 
8161 aa 





Leishmania major Friedlin (lmaj0)
Eukaryota
173
30.1 %
(52)
39.3 % 
(68)
25.4 % 
(44)
63.1 %
83 aa 
3112 aa 





Aspergillus nidulans FGSC A4 (anid0)
Eukaryota
9541
40.6 %
(3878)
54.3 % 
(5178)
25.1 % 
(2397)
0.0 %
12 aa 
7214 aa 





Gibberella zeae PH-1 (gzea0)
Eukaryota
11640
37.5 %
(4366)
50.7 % 
(5905)
25.6 % 
(2980)
0.0 %
11 aa 
11999 aa 





Magnaporthe grisea 70-15 (mgri0)
Eukaryota
11109
32.1 %
(3567)
45.1 % 
(5010)
23.7 % 
(2632)
0.0 %
9 aa 
6586 aa 





Neurospora crassa (ncra0)
Eukaryota
10118
30.0 %
(3038)
41.0 % 
(4151)
20.4 % 
(2068)
0.0 %
9 aa 
10820 aa 





Yarrowia lipolytica CLIB99 (ylip0)
Eukaryota
6544
40.1 %
(2625)
52.8 % 
(3453)
22.9 % 
(1501)
0.0 %
15 aa 
4696 aa 





Debaryomyces hansenii CBS767 (dhan0)
Eukaryota
6317
40.5 %
(2560)
51.5 % 
(3256)
22.9 % 
(1444)
0.0 %
13 aa 
4189 aa 





Ashbya gossypii (agos0)
Eukaryota
4726
43.1 %
(2036)
56.2 % 
(2656)
20.1 % 
(948)
51.9 %
25 aa 
4899 aa 





Kluyveromyces lactis NRRL Y-1140 (klac0)
Eukaryota
5336
41.2 %
(2197)
53.6 % 
(2861)
22.2 % 
(1187)
0.0 %
40 aa 
4915 aa 





Naumovia castellii (ncas0)
Eukaryota
4677
45.9 %
(2149)
57.7 % 
(2700)
19.7 % 
(921)
0.0 %
1 aa 
4933 aa 





Saccharomyces bayanus (sbay0)
Eukaryota
8762
28.5 %
(2500)
36.8 % 
(3225)
25.9 % 
(2270)
0.0 %
1 aa 
3266 aa 





Saccharomyces kluyveri (sklu0)
Eukaryota
2968
45.8 %
(1360)
57.2 % 
(1697)
19.7 % 
(585)
0.0 %
1 aa 
3160 aa 





Saccharomyces kudriavzevii (skud0)
Eukaryota
3768
42.4 %
(1599)
53.6 % 
(2018)
20.0 % 
(753)
0.0 %
1 aa 
2158 aa 





Saccharomyces mikatae (smik0)
Eukaryota
8110
31.2 %
(2527)
39.9 % 
(3238)
25.0 % 
(2029)
0.0 %
1 aa 
2672 aa 





Saccharomyces paradoxus (spar0)
Eukaryota
8008
31.0 %
(2485)
40.0 % 
(3200)
26.2 % 
(2100)
0.0 %
1 aa 
4092 aa 





Saccharomyces cerevisiae (scer0)
Eukaryota
5870
42.5 %
(2496)
55.1 % 
(3232)
21.6 % 
(1270)
0.0 %
16 aa 
4910 aa 





Candida glabrata CBS138 (cgla0)
Eukaryota
5192
43.3 %
(2248)
56.6 % 
(2939)
21.4 % 
(1112)
0.0 %
41 aa 
4880 aa 





Schizosaccharomyces pombe 972h- (spom0)
Eukaryota
5279
46.5 %
(2454)
58.1 % 
(3067)
20.9 % 
(1102)
0.0 %
14 aa 
4924 aa 





Ustilago maydis 521 (umay0)
Eukaryota
6522
39.6 %
(2582)
52.9 % 
(3451)
24.2 % 
(1580)
0.0 %
20 aa 
5431 aa 





Drosophila melanogaster (dmel0)
Eukaryota
18729
47.3 %
(8863)
57.1 % 
(10696)
30.6 % 
(5731)
0.0 %
28 aa 
23015 aa 





Bombyx mori (bmor0)
Eukaryota
21314
29.5 %
(6285)
35.8 % 
(7621)
16.6 % 
(3542)
0.0 %
28 aa 
4621 aa 





Anopheles gambiae (agam0)
Eukaryota
13887
46.3 %
(6436)
56.4 % 
(7829)
25.4 % 
(3529)
0.0 %
20 aa 
8588 aa 





Xenopus tropicalis (xtro0)
Eukaryota
28382
51.9 %
(14724)
63.8 % 
(18120)
23.4 % 
(6636)
0.0 %
42 aa 
27000 aa 





Takifugu rubripes rubripes (trub0)
Eukaryota
37452
38.2 %
(14312)
41.8 % 
(15673)
16.6 % 
(6201)
0.0 %
4 aa 
5522 aa 





Danio rerio (drer0)
Eukaryota
32075
60.1 %
(19262)
67.8 % 
(21752)
25.7 % 
(8242)
0.0 %
20 aa 
7249 aa 





Gallus gallus (ggal0)
Eukaryota
24876
54.8 %
(13623)
63.2 % 
(15719)
26.0 % 
(6460)
0.0 %
15 aa 
6981 aa 





Canis familiaris (cfam0)
Eukaryota
16306
59.6 %
(9725)
69.1 % 
(11271)
31.2 % 
(5082)
0.0 %
52 aa 
22739 aa 





Homo sapiens (hsap0)
Eukaryota
33873
53.8 %
(18214)
61.9 % 
(20956)
24.9 % 
(8444)
0.0 %
15 aa 
32794 aa 





Homo sapiens (hsap1)
Eukaryota
39091
39.7 %
(15520)
48.5 % 
(18951)
20.2 % 
(7906)
0.0 %
13 aa 
3395 aa 





Homo sapiens (hsap2)
Eukaryota
27469
53.4 %
(14671)
60.7 % 
(16679)
27.6 % 
(7582)
0.0 %
16 aa 
34350 aa 





Homo sapiens cDNA (huge0)
Eukaryota
2037
52.3 %
(1066)
68.7 % 
(1399)
21.9 % 
(447)
49.1 %
73 aa 
4594 aa 





Pan troglodytes (ptro0)
Eukaryota
38231
45.9 %
(17536)
52.7 % 
(20150)
21.0 % 
(8033)
0.0 %
1 aa 
6531 aa 





Mus musculus (mmus0)
Eukaryota
32452
52.1 %
(16920)
59.6 % 
(19349)
27.7 % 
(9004)
0.0 %
20 aa 
7398 aa 





Rattus norvegicus (rnor0)
Eukaryota
28212
56.3 %
(15895)
64.1 % 
(18095)
27.9 % 
(7861)
0.0 %
16 aa 
7340 aa 





Ciona intestinalis (cint0)
Eukaryota
15865
45.9 %
(7278)
51.6 % 
(8184)
24.6 % 
(3901)
0.0 %
2 aa 
17232 aa 





Tetraodon nigroviridis (tnig0)
Eukaryota
27918
45.6 %
(12739)
52.1 % 
(14537)
24.6 % 
(6859)
0.0 %
24 aa 
10495 aa 





Caenorhabditis briggsae (cbri0)
Eukaryota
14713
42.4 %
(6245)
51.9 % 
(7634)
36.2 % 
(5329)
0.0 %
22 aa 
7747 aa 





Caenorhabditis elegans (cele0)
Eukaryota
22382
34.8 %
(7795)
43.3 % 
(9693)
37.1 % 
(8294)
0.0 %
16 aa 
18562 aa 





Encephalitozoon cuniculi (ecun0)
Eukaryota
1996
38.8 %
(775)
47.8 % 
(954)
20.6 % 
(412)
0.0 %
52 aa 
3436 aa 





Cyanidioschyzon merolae (cmer0)
Eukaryota
5254
45.8 %
(2406)
56.4 % 
(2964)
23.2 % 
(1217)
0.0 %
25 aa 
6020 aa 





Chlamydomonas reinhardtii (crei0)
Eukaryota
19909
23.4 %
(4650)
29.6 % 
(5891)
19.5 % 
(3875)
0.0 %
6 aa 
13501 aa 





Oryza sativa (japonica cultivar-group) (osat0)
Eukaryota
40913
21.7 %
(8889)
29.2 % 
(11928)
21.3 % 
(8709)
43.5 %
23 aa 
4190 aa 





Oryza sativa (japonica cultivar-group) (osat1)
Eukaryota
32071
38.0 %
(12196)
49.5 % 
(15867)
26.4 % 
(8470)
0.0 %
1 aa 
1921 aa 





Arabidopsis thaliana (atha0)
Eukaryota
29094
43.9 %
(12758)
58.1 % 
(16916)
27.3 % 
(7936)
0.0 %
19 aa 
5336 aa 





186 (bp180)
Viruses
46
17.4 %
(8)
23.9 % 
(11)
13.0 % 
(6)
53.1 %
58 aa 
812 aa 





44RR2.8t (bp441)
Viruses
252
17.9 %
(45)
24.2 % 
(61)
6.7 % 
(17)
43.9 %
32 aa 
1420 aa 





A511 (bpa50)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
36.7 %
106 aa 
562 aa 





AaƒÓ23 (bpaa0)
Viruses
66
7.6 %
(5)
12.1 % 
(8)
19.7 % 
(13)
42.5 %
27 aa 
800 aa 





Aeh1 (bpae0)
Viruses
331
12.4 %
(41)
19.6 % 
(65)
11.2 % 
(37)
42.8 %
28 aa 
1358 aa 





Bcep781 (bpbc0)
Viruses
61
9.8 %
(6)
11.5 % 
(7)
4.9 % 
(3)
63.3 %
38 aa 
873 aa 





Bcep1 (bpbc1)
Viruses
71
7.0 %
(5)
9.9 % 
(7)
9.9 % 
(7)
63.6 %
41 aa 
824 aa 





Bcep43 (bpbc3)
Viruses
66
9.1 %
(6)
10.6 % 
(7)
7.6 % 
(5)
63.4 %
47 aa 
824 aa 





BcepMu (bpbc4)
Viruses
53
5.7 %
(3)
11.3 % 
(6)
15.1 % 
(8)
62.9 %
67 aa 
846 aa 





BcepB1A (bpbc5)
Viruses
58
6.9 %
(4)
13.8 % 
(8)
13.8 % 
(8)
54.5 %
53 aa 
919 aa 





Bxz1 (bpbx1)
Viruses
225
3.6 %
(8)
10.2 % 
(23)
8.4 % 
(19)
64.8 %
31 aa 
1370 aa 





ƒÓCTX (bpct0)
Viruses
47
4.3 %
(2)
12.8 % 
(6)
12.8 % 
(6)
62.6 %
35 aa 
904 aa 





EJ-1 (bpej0)
Viruses
73
4.1 %
(3)
15.1 % 
(11)
19.2 % 
(14)
39.6 %
34 aa 
748 aa 





ƒÓg1e (bpg10)
Viruses
49
4.1 %
(2)
10.2 % 
(5)
12.2 % 
(6)
42.7 %
49 aa 
1662 aa 





HF2 (bphf0)
Viruses
114
7.0 %
(8)
13.2 % 
(15)
6.1 % 
(7)
55.8 %
29 aa 
1288 aa 





HP1 (bphp0)
Viruses
41
9.8 %
(4)
17.1 % 
(7)
12.2 % 
(5)
40.0 %
61 aa 
925 aa 





HP2 (bphp1)
Viruses
36
8.3 %
(3)
13.9 % 
(5)
13.9 % 
(5)
39.9 %
61 aa 
910 aa 





K139 (bpk10)
Viruses
44
4.5 %
(2)
11.4 % 
(5)
6.8 % 
(3)
48.9 %
53 aa 
800 aa 





KVP40 (bpkv0)
Viruses
381
11.5 %
(44)
17.1 % 
(65)
11.3 % 
(43)
42.6 %
36 aa 
1256 aa 





L-413C (bpl40)
Viruses
40
5.0 %
(2)
22.5 % 
(9)
17.5 % 
(7)
52.1 %
56 aa 
913 aa 





Mu (bpmu0)
Viruses
53
13.2 %
(7)
15.1 % 
(8)
11.3 % 
(6)
52.1 %
39 aa 
690 aa 





P1 (bpp11)
Viruses
110
9.1 %
(10)
13.6 % 
(15)
9.1 % 
(10)
47.3 %
31 aa 
2255 aa 





P2 (bpp20)
Viruses
42
4.8 %
(2)
19.0 % 
(8)
14.3 % 
(6)
50.2 %
56 aa 
815 aa 





P4 (bpp40)
Viruses
13
7.7 %
(1)
23.1 % 
(3)
7.7 % 
(1)
49.5 %
88 aa 
777 aa 





PA01 (bppa0)
Viruses
34
11.8 %
(4)
20.6 % 
(7)
8.8 % 
(3)
 %
23 aa 
745 aa 





ƒÓKZ (bpph0)
Viruses
306
5.6 %
(17)
10.5 % 
(32)
11.8 % 
(36)
36.8 %
63 aa 
2237 aa 





ƒÓCh1 (bpph1)
Viruses
98
9.2 %
(9)
14.3 % 
(14)
5.1 % 
(5)
61.9 %
54 aa 
581 aa 





PSP3 (bpps2)
Viruses
42
7.1 %
(3)
19.0 % 
(8)
9.5 % 
(4)
52.8 %
60 aa 
814 aa 





P-SSM2 (bpps3)
Viruses
329
13.4 %
(44)
19.8 % 
(65)
8.2 % 
(27)
35.5 %
24 aa 
5195 aa 





P-SSM4 (bpps4)
Viruses
198
11.6 %
(23)
16.2 % 
(32)
13.6 % 
(27)
36.7 %
35 aa 
7312 aa 





RB69 (bprb0)
Viruses
256
17.6 %
(45)
22.7 % 
(58)
9.4 % 
(24)
 %
19 aa 
1277 aa 





RB49 (bprb1)
Viruses
272
14.7 %
(40)
19.1 % 
(52)
11.0 % 
(30)
 %
32 aa 
1246 aa 





Rd (bprd0)
Viruses
47
10.6 %
(5)
19.1 % 
(9)
8.5 % 
(4)
 %
38 aa 
731 aa 





RM378 (bprm0)
Viruses
146
4.8 %
(7)
12.3 % 
(18)
9.6 % 
(14)
42.5 %
27 aa 
1019 aa 





S-PM2 (bpsp4)
Viruses
241
10.8 %
(26)
15.4 % 
(37)
6.6 % 
(16)
 %
25 aa 
3779 aa 





T4 (bpt40)
Viruses
278
17.6 %
(49)
23.7 % 
(66)
10.4 % 
(29)
35.3 %
26 aa 
1289 aa 





VHML (bpvh0)
Viruses
57
8.8 %
(5)
17.5 % 
(10)
7.0 % 
(4)
50.6 %
33 aa 
1023 aa 





WƒÓ (bpwp0)
Viruses
44
6.8 %
(3)
22.7 % 
(10)
11.4 % 
(5)
51.7 %
56 aa 
815 aa 





44AHJD (bp440)
Viruses
21
4.8 %
(1)
9.5 % 
(2)
9.5 % 
(2)
29.6 %
55 aa 
755 aa 





APSE-1 (bpap0)
Viruses
54
9.3 %
(5)
11.1 % 
(6)
18.5 % 
(10)
43.9 %
73 aa 
993 aa 





B103 (bpb11)
Viruses
17
41.2 %
(7)
41.2 % 
(7)
5.9 % 
(1)
37.7 %
100 aa 
860 aa 





Bcep22 (bpbc2)
Viruses
78
7.7 %
(6)
16.7 % 
(13)
9.0 % 
(7)
65.3 %
32 aa 
4602 aa 





BIP-1 (bpbi7)
Viruses
48
12.5 %
(6)
18.8 % 
(9)
8.3 % 
(4)
65.4 %
56 aa 
2052 aa 





BMP-1 (bpbm0)
Viruses
47
12.8 %
(6)
19.1 % 
(9)
8.5 % 
(4)
65.4 %
56 aa 
2052 aa 





BPP-1 (bpbp0)
Viruses
49
12.2 %
(6)
18.4 % 
(9)
10.2 % 
(5)
65.4 %
56 aa 
2052 aa 





C1 (bpc10)
Viruses
20
5.0 %
(1)
15.0 % 
(3)
5.0 % 
(1)
34.6 %
51 aa 
784 aa 





Cp-1 (bpcp0)
Viruses
28
10.7 %
(3)
10.7 % 
(3)
14.3 % 
(4)
38.9 %
62 aa 
586 aa 





rb15 (bpep0)
Viruses
49
4.1 %
(2)
14.3 % 
(7)
18.4 % 
(9)
50.8 %
35 aa 
1070 aa 





ES18 (bpes0)
Viruses
79
8.9 %
(7)
10.1 % 
(8)
13.9 % 
(11)
48.6%
26 aa 
1124 aa 





GA-1 (bpga0)
Viruses
35
22.9 %
(8)
14.3 % 
(5)
22.9 % 
(8)
34.7 %
25 aa 
740 aa 





gh-1 (bpgh0)
Viruses
42
19.0 %
(8)
23.8 % 
(10)
7.1 % 
(3)
57.4 %
25 aa 
1392 aa 





H-19B (bph10)
Viruses
22
9.1 %
(2)
18.2 % 
(4)
13.6 % 
(3)
45.9 %
44 aa 
315 aa 





KS7 (bpks0)
Viruses
56
8.9 %
(5)
17.9 % 
(10)
7.1 % 
(4)
50.1 %
20 aa 
728 aa 





Mx8 (bpmx0)
Viruses
86
4.7 %
(4)
7.0 % 
(6)
11.6 % 
(10)
67.7 %
32 aa 
743 aa 





P1 (bpp10)
Viruses
11
0.0 %
(0)
18.2 % 
(2)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





P22 (bpp21)
Viruses
36
16.7 %
(6)
22.2 % 
(8)
5.6 % 
(2)
47.1 %
47 aa 
667 aa 





P60 (bpp60)
Viruses
80
11.2 %
(9)
18.8 % 
(15)
6.2 % 
(5)
53.2 %
40 aa 
680 aa 





PaP3 (bppa1)
Viruses
69
8.7 %
(6)
13.0 % 
(9)
11.6 % 
(8)
52.1 %
26 aa 
1056 aa 





PaP2 (bppa2)
Viruses
58
3.4 %
(2)
8.6 % 
(5)
13.8 % 
(8)
45.4 %
48 aa 
1849 aa 





ƒÓYeO3-12 (bpph2)
Viruses
59
20.3 %
(12)
20.3 % 
(12)
15.3 % 
(9)
50.6 %
25 aa 
1320 aa 





ƒÓA1122 (bpphD)
Viruses
50
18.0 %
(9)
26.0 % 
(13)
10.0 % 
(5)
48.3 %
27 aa 
1318 aa 





P68 (bpphE)
Viruses
22
9.1 %
(2)
13.6 % 
(3)
9.1 % 
(2)
29.3 %
55 aa 
755 aa 





ƒÓKMV (bpphF)
Viruses
48
10.4 %
(5)
18.8 % 
(9)
12.5 % 
(6)
62.3 %
64 aa 
1337 aa 





P-SSP7 (bpps5)
Viruses
53
13.2 %
(7)
24.5 % 
(13)
11.3 % 
(6)
38.8 %
26 aa 
1245 aa 





PZA (bppz0)
Viruses
27
25.9 %
(7)
25.9 % 
(7)
11.1 % 
(3)
39.7 %
37 aa 
854 aa 





V (bpsf1)
Viruses
53
11.3 %
(6)
26.4 % 
(14)
13.2 % 
(7)
50.8 %
56 aa 
611 aa 





Sf6 (bpsf2)
Viruses
66
16.7 %
(11)
16.7 % 
(11)
12.1 % 
(8)
47.5 %
27 aa 
708 aa 





SIO1 (bpsi0)
Viruses
34
0.0 %
(0)
0.0 % 
(0)
11.8 % 
(4)
46.2 %
77 aa 
1484 aa 





SP6 (bpsp0)
Viruses
20
20.0 %
(4)
25.0 % 
(5)
5.0 % 
(1)
46.1 %
42 aa 
874 aa 





ST64B (bpst0)
Viruses
56
12.5 %
(7)
23.2 % 
(13)
8.9 % 
(5)
51.0 %
54 aa 
642 aa 





ST64T (bpst1)
Viruses
65
13.8 %
(9)
18.5 % 
(12)
10.8 % 
(7)
47.5 %
37 aa 
725 aa 





T3 (bpt30)
Viruses
44
18.2 %
(8)
22.7 % 
(10)
15.9 % 
(7)
49.9 %
25 aa 
884 aa 





T7 (bpt70)
Viruses
58
17.2 %
(10)
20.7 % 
(12)
12.1 % 
(7)
48.4 %
29 aa 
1318 aa 





VpV262 (bpvp0)
Viruses
67
3.0 %
(2)
9.0 % 
(6)
9.0 % 
(6)
49.5 %
46 aa 
1536 aa 





VP5 (bpvp1)
Viruses
12
41.7 %
(5)
50.0 % 
(6)
0.0 % 
(0)
50.5 %
105 aa 
782 aa 





VP2 (bpvp2)
Viruses
14
28.6 %
(4)
42.9 % 
(6)
0.0 % 
(0)
50.5 %
105 aa 
782 aa 





ƒÓ4795 (bp470)
Viruses
48
10.4 %
(5)
14.6 % 
(7)
14.6 % 
(7)
50.6 %
25 aa 
645 aa 





77 (bp770)
Viruses
69
8.7 %
(6)
14.5 % 
(10)
10.1 % 
(7)
33.5 %
33 aa 
1509 aa 





933W (bp930)
Viruses
80
8.8 %
(7)
12.5 % 
(10)
12.5 % 
(10)
49.4 %
51 aa 
2806 aa 





A118 (bpa10)
Viruses
72
4.2 %
(3)
15.3 % 
(11)
13.9 % 
(10)
36.1 %
21 aa 
1794 aa 





B1 (bpb10)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
36.8 %
65 aa 
273 aa 





Barnyard (bpba0)
Viruses
109
0.9 %
(1)
6.4 % 
(7)
0.0 % 
(0)
57.3 %
44 aa 
2047 aa 





BF23 (bpbf0)
Viruses
8
12.5 %
(1)
0.0 % 
(0)
12.5 % 
(1)
38.5 %
75 aa 
595 aa 





bIL170 (bpbi0)
Viruses
64
6.2 %
(4)
15.6 % 
(10)
10.9 % 
(7)
34.3 %
33 aa 
916 aa 





bIL285 (bpbi1)
Viruses
62
8.1 %
(5)
16.1 % 
(10)
9.7 % 
(6)
35.2 %
42 aa 
894 aa 





bIL286 (bpbi2)
Viruses
61
6.6 %
(4)
18.0 % 
(11)
13.1 % 
(8)
35.3 %
32 aa 
1640 aa 





bIL309 (bpbi3)
Viruses
56
5.4 %
(3)
17.9 % 
(10)
14.3 % 
(8)
35.7 %
40 aa 
1441 aa 





bIL310 (bpbi4)
Viruses
29
0.0 %
(0)
13.8 % 
(4)
10.3 % 
(3)
35.9 %
28 aa 
542 aa 





bIL311 (bpbi5)
Viruses
22
13.6 %
(3)
22.7 % 
(5)
9.1 % 
(2)
34.2 %
38 aa 
489 aa 





bIL312 (bpbi6)
Viruses
27
3.7 %
(1)
11.1 % 
(3)
11.1 % 
(3)
33.0 %
46 aa 
480 aa 





BK5-T (bpbk0)
Viruses
63
7.9 %
(5)
15.9 % 
(10)
15.9 % 
(10)
35.0 %
42 aa 
1904 aa 





Bxb1 (bpbx0)
Viruses
86
7.0 %
(6)
12.8 % 
(11)
12.8 % 
(11)
63.6 %
31 aa 
823 aa 





Bxz2 (bpbx2)
Viruses
86
9.3 %
(8)
16.3 % 
(14)
14.0 % 
(12)
64.2 %
20 aa 
1008 aa 





c2 (bpc20)
Viruses
39
2.6 %
(1)
12.8 % 
(5)
15.4 % 
(6)
36.3 %
22 aa 
706 aa 





Che8 (bpch0)
Viruses
112
2.7 %
(3)
9.8 % 
(11)
8.9 % 
(10)
61.3 %
31 aa 
1188 aa 





Che9c (bpch1)
Viruses
84
2.4 %
(2)
13.1 % 
(11)
16.7 % 
(14)
65.4 %
44 aa 
1213 aa 





Che9d (bpch2)
Viruses
111
4.5 %
(5)
10.8 % 
(12)
7.2 % 
(8)
61.0 %
34 aa 
1183 aa 





CJW1 (bpcj0)
Viruses
141
8.5 %
(12)
12.8 % 
(18)
7.1 % 
(10)
63.1 %
32 aa 
1576 aa 





Corndog (bpco0)
Viruses
122
4.1 %
(5)
9.8 % 
(12)
13.1 % 
(16)
65.4 %
33 aa 
1461 aa 





D29 (bpd20)
Viruses
79
10.1 %
(8)
21.5 % 
(17)
10.1 % 
(8)
63.5 %
28 aa 
837 aa 





D3 (bpd30)
Viruses
94
8.5 %
(8)
11.7 % 
(11)
12.8 % 
(12)
57.8 %
32 aa 
909 aa 





D3112 (bpd31)
Viruses
55
5.5 %
(3)
7.3 % 
(4)
10.9 % 
(6)
64.3 %
34 aa 
735 aa 





HK022 (bphk0)
Viruses
57
15.8 %
(9)
21.1 % 
(12)
10.5 % 
(6)
49.5 %
50 aa 
1183 aa 





HK620 (bphk1)
Viruses
58
12.1 %
(7)
12.1 % 
(7)
8.6 % 
(5)
46.7 %
27 aa 
722 aa 





HK97 (bphk2)
Viruses
61
16.4 %
(10)
23.0 % 
(14)
11.5 % 
(7)
49.8 %
32 aa 
1296 aa 





2389 (bpl20)
Viruses
57
7.0 %
(4)
17.5 % 
(10)
12.3 % 
(7)
34.7 %
48 aa 
1026 aa 





L5 (bpl50)
Viruses
85
10.6 %
(9)
20.0 % 
(17)
7.1 % 
(6)
62.3 %
37 aa 
837 aa 





ă (bpla0)
Viruses
66
21.2 %
(14)
31.8 % 
(21)
10.6 % 
(7)
49.9 %
28 aa 
1132 aa 





A2 (bplc0)
Viruses
61
8.2 %
(5)
16.4 % 
(10)
8.2 % 
(5)
44.9 %
59 aa 
1621 aa 





Lj928 (bplj0)
Viruses
50
4.0 %
(2)
14.0 % 
(7)
12.0 % 
(6)
34.7 %
48 aa 
1544 aa 





Lj965 (bplj1)
Viruses
46
6.5 %
(3)
15.2 % 
(7)
13.0 % 
(6)
35.1 %
49 aa 
2021 aa 





N15 (bpn10)
Viruses
60
11.7 %
(7)
26.7 % 
(16)
6.7 % 
(4)
51.2 %
18 aa 
1324 aa 





Omega (bpom0)
Viruses
237
7.6 %
(18)
10.5 % 
(25)
9.3 % 
(22)
61.4 %
22 aa 
1599 aa 





P27 (bpp22)
Viruses
58
12.1 %
(7)
20.7 % 
(12)
12.1 % 
(7)
49.4 %
51 aa 
649 aa 





P335 (bpp30)
Viruses
49
12.2 %
(6)
20.4 % 
(10)
10.2 % 
(5)
35.4 %
54 aa 
1711 aa 





PG1 (bppg0)
Viruses
100
4.0 %
(4)
10.0 % 
(10)
10.0 % 
(10)
66.5 %
45 aa 
1932 aa 





ƒÓ105 (bpph3)
Viruses
51
7.8 %
(4)
21.6 % 
(11)
11.8 % 
(6)
42.7 %
56 aa 
1018 aa 





ƒÓC31 (bpph4)
Viruses
55
7.3 %
(4)
21.8 % 
(12)
14.5 % 
(8)
63.6 %
41 aa 
729 aa 





ƒÓ3626 (bpph5)
Viruses
50
20.0 %
(10)
28.0 % 
(14)
14.0 % 
(7)
28.4 %
39 aa 
983 aa 





ƒÓE125 (bpph6)
Viruses
71
4.2 %
(3)
16.9 % 
(12)
11.3 % 
(8)
61.2 %
43 aa 
1354 aa 





ƒÓETA (bpph7)
Viruses
66
9.1 %
(6)
18.2 % 
(12)
13.6 % 
(9)
35.4 %
48 aa 
989 aa 





ƒÓNIH1.1 (bpph8)
Viruses
55
9.1 %
(5)
21.8 % 
(12)
12.7 % 
(7)
38.6 %
49 aa 
1086 aa 





ƒÓPV83 (bpph9)
Viruses
65
9.2 %
(6)
24.6 % 
(16)
13.8 % 
(9)
33.5 %
46 aa 
1313 aa 





ƒÓSLT (bpphA)
Viruses
62
12.9 %
(8)
25.8 % 
(16)
14.5 % 
(9)
33.3 %
35 aa 
1374 aa 





ƒÓadh (bpphB)
Viruses
63
9.5 %
(6)
19.0 % 
(12)
12.7 % 
(8)
35.6 %
49 aa 
1487 aa 





ƒÓBT1 (bpphC)
Viruses
55
7.3 %
(4)
18.2 % 
(10)
16.4 % 
(9)
62.8 %
46 aa 
808 aa 





ƒÓ11 (bpphH)
Viruses
53
3.8 %
(2)
22.6 % 
(12)
9.4 % 
(5)
34.5 %
57 aa 
910 aa 





ƒÓ12 (bpphI)
Viruses
49
14.3 %
(7)
28.6 % 
(14)
4.1 % 
(2)
33.3 %
54 aa 
2066 aa 





ƒÓ13 (bpphJ)
Viruses
49
6.1 %
(3)
16.3 % 
(8)
18.4 % 
(9)
33.5 %
52 aa 
1550 aa 





ƒÓJL001 (bppj0)
Viruses
90
6.7 %
(6)
10.0 % 
(9)
11.1 % 
(10)
62.1 %
29 aa 
1152 aa 





ƒÓKO2 (bppk0)
Viruses
64
10.9 %
(7)
20.3 % 
(13)
9.4 % 
(6)
51.5 %
33 aa 
3433 aa 





ƒÓLC3 (bppl0)
Viruses
51
7.8 %
(4)
21.6 % 
(11)
9.8 % 
(5)
35.5 %
52 aa 
843 aa 





ƒÕM2 (bpps0)
Viruses
31
0.0 %
(0)
12.9 % 
(4)
6.5 % 
(2)
46.3 %
90 aa 
1186 aa 





ƒÕM100 (bpps1)
Viruses
37
5.4 %
(2)
10.8 % 
(4)
10.8 % 
(4)
45.7 %
85 aa 
1157 aa 





PY54 (bppy0)
Viruses
67
6.0 %
(4)
20.9 % 
(14)
9.0 % 
(6)
44.6 %
54 aa 
1330 aa 





r1t (bpr10)
Viruses
50
10.0 %
(5)
24.0 % 
(12)
14.0 % 
(7)
35.5 %
54 aa 
667 aa 





Rosebush (bpro0)
Viruses
90
5.6 %
(5)
11.1 % 
(10)
12.2 % 
(11)
69.0 %
37 aa 
1882 aa 





PVL (bpsa0)
Viruses
62
8.1 %
(5)
21.0 % 
(13)
17.7 % 
(11)
33.6 %
43 aa 
759 aa 





Sfi11 (bpsf0)
Viruses
25
4.0 %
(1)
8.0 % 
(2)
12.0 % 
(3)
38.6 %
53 aa 
1510 aa 





sk1 (bpsk0)
Viruses
54
5.6 %
(3)
7.4 % 
(4)
11.1 % 
(6)
34.5 %
39 aa 
999 aa 





SM1 (bpsm0)
Viruses
56
3.6 %
(2)
17.9 % 
(10)
8.9 % 
(5)
39.2 %
42 aa 
1062 aa 





SPƒÀc2 (bpsp1)
Viruses
185
11.4 %
(21)
18.4 % 
(34)
15.1 % 
(28)
34.6 %
21 aa 
2285 aa 





SPP1 (bpsp2)
Viruses
106
6.6 %
(7)
11.3 % 
(12)
23.6 % 
(25)
43.7 %
51 aa 
846 aa 





MM1 (bpsp3)
Viruses
53
11.3 %
(6)
18.9 % 
(10)
11.3 % 
(6)
38.4 %
57 aa 
1989 aa 





7201 (bpst2)
Viruses
46
8.7 %
(4)
21.7 % 
(10)
10.9 % 
(5)
38.7 %
47 aa 
1554 aa 





DT1 (bpst3)
Viruses
47
4.3 %
(2)
21.3 % 
(10)
4.3 % 
(2)
39.1 %
36 aa 
1278 aa 





O1205 (bpst4)
Viruses
57
3.5 %
(2)
12.3 % 
(7)
8.8 % 
(5)
38.3 %
42 aa 
1517 aa 





Sfi19 (bpst5)
Viruses
45
6.7 %
(3)
22.2 % 
(10)
8.9 % 
(4)
38.3 %
40 aa 
1626 aa 





Sfi21 (bpst6)
Viruses
50
4.0 %
(2)
22.0 % 
(11)
12.0 % 
(6)
37.6 %
48 aa 
1560 aa 





Stx2 (bpst7)
Viruses
166
4.2 %
(7)
8.4 % 
(14)
17.5 % 
(29)
49.4 %
33 aa 
2806 aa 





Stx1 converting bacteriophage (bpst8)
Viruses
167
4.8 %
(8)
7.8 % 
(13)
16.8 % 
(28)
49.7 %
42 aa 
2806 aa 





Stx2 converting bacteriophage II (bpst9)
Viruses
170
5.3 %
(9)
8.2 % 
(14)
18.2 % 
(31)
49.9 %
41 aa 
2576 aa 





T1 (bpt10)
Viruses
78
5.1 %
(4)
11.5 % 
(9)
12.8 % 
(10)
45.6 %
36 aa 
1172 aa 





T5 (bpt50)
Viruses
162
13.6 %
(22)
21.0 % 
(34)
15.4 % 
(25)
35.4 %
27 aa 
1396 aa 





TM4 (bptm0)
Viruses
89
3.4 %
(3)
10.1 % 
(9)
12.4 % 
(11)
68.1 %
29 aa 
1229 aa 





TP901-1 (bptp0)
Viruses
56
10.7 %
(6)
16.1 % 
(9)
7.1 % 
(4)
35.4 %
47 aa 
937 aa 





Tuc2009 (bptu0)
Viruses
56
12.5 %
(7)
23.2 % 
(13)
8.9 % 
(5)
36.2 %
32 aa 
1025 aa 





ul36 (bpul0)
Viruses
58
8.6 %
(5)
17.2 % 
(10)
13.8 % 
(8)
35.8 %
50 aa 
908 aa 





VT2-Sa (bpvt0)
Viruses
82
9.8 %
(8)
13.4 % 
(11)
13.4 % 
(11)
49.9 %
42 aa 
2806 aa 





VWB (bpvw0)
Viruses
61
1.6 %
(1)
9.8 % 
(6)
9.8 % 
(6)
71.1 %
51 aa 
1440 aa 





ƒÓ1026b (bpphG)
Viruses
83
4.8 %
(4)
16.9 % 
(14)
12.0 % 
(10)
60.7 %
35 aa 
1354 aa 





BcepC6B (bpbc6)
Viruses
46
19.6 %
(9)
28.3 % 
(13)
13.0 % 
(6)
65.2 %
49 aa 
888 aa 





BcepNazgul (bpbc7)
Viruses
75
4.0 %
(3)
8.0 % 
(6)
12.0 % 
(9)
60.7 %
31 aa 
1270 aa 





Felix 01 (bpfe0)
Viruses
247
7.3 %
(18)
12.6 % 
(31)
17.0 % 
(42)
39.0 %
37 aa 
909 aa 





MAV1 (bpma0)
Viruses
15
6.7 %
(1)
13.3 % 
(2)
13.3 % 
(2)
29.0 %
91 aa 
766 aa 





PBC5 (bppb0)
Viruses
83
2.4 %
(2)
12.0 % 
(10)
12.0 % 
(10)
61.5 %
80 aa 
2849 aa 





ƒÓHSIC (bpphK)
Viruses
47
6.4 %
(3)
6.4 % 
(3)
10.6 % 
(5)
44.0 %
49 aa 
1069 aa 





ƒÓMFV1 (bppm1)
Viruses
17
17.6 %
(3)
23.5 % 
(4)
11.8 % 
(2)
24.8 %
53 aa 
615 aa 





Xp10 (bpxp0)
Viruses
60
11.7 %
(7)
25.0 % 
(15)
10.0 % 
(6)
52.0 %
50 aa 
1574 aa 





PM2 (bppm0)
Viruses
22
4.5 %
(1)
4.5 % 
(1)
31.8 % 
(7)
42.2 %
30 aa 
634 aa 





K (bpk_0)
Viruses
115
12.2 %
(14)
23.5 % 
(27)
10.4 % 
(12)
30.6 %
99 aa 
1351 aa 





PRD1 (bppr0)
Viruses
22
36.4 %
(8)
36.4 % 
(8)
36.4 % 
(8)
48.1 %
42 aa 
591 aa 









Ratio of ORFs, whose 3D-structures are predicted


DATE Dec 22 2004

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf 






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.





Aeropyrum pernix K1 (aper0)
Archaea
2694
22.6 %
(608)
31.4 % 
(846)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Sulfolobus solfataricus P2 (ssol0)
Archaea
2994
35.4 %
(1059)
48.8 % 
(1460)
23.8 % 
(712)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii 7 (stok0)
Archaea
2826
34.9 %
(985)
47.6 % 
(1344)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum IM2 (paer1)
Archaea
2605
30.8 %
(802)
43.5 % 
(1134)
25.9 % 
(674)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus DSM4304 (aful0)
Archaea
2407
40.3 %
(971)
55.1 % 
(1326)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Methanosarcina acetivorans C2A (mace0)
Archaea
4544
34.6 %
(1570)
50.2 % 
(2280)
27.7 % 
(1260)
42.7 %
41 aa 
4226 aa 





Methanosarcina mazei Goe1 (mmaz0)
Archaea
3371
36.2 %
(1219)
52.6 % 
(1773)
24.1 % 
(812)
41.5 %
16 aa 
1898 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
34.3 %
(894)
48.4 % 
(1262)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Methanothermobacter thermautotrophicus Delta H (mthe0)
Archaea
1869
42.1 %
(787)
56.8 % 
(1062)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanocaldococcus jannaschii DSM2661 (mjan0)
Archaea
1770
39.0 %
(691)
53.4 % 
(945)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanococcus maripaludis S2 (mmar0)
Archaea
1722
44.6 %
(768)
58.9 % 
(1015)
23.4 % 
(403)
33.1 %
32 aa 
2076 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
36.0 %
(608)
50.6 % 
(853)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Pyrococcus abyssi Orsay (paby0)
Archaea
1784
44.2 %
(788)
57.0 % 
(1016)
24.7 % 
(441)
44.7 %
18 aa 
2122 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
41.2 %
(850)
54.1 % 
(1117)
24.8 % 
(513)
40.8 %
21 aa 
1740 aa 





Pyrococcus horikoshii OT3 (phor0)
Archaea
2061
35.8 %
(738)
46.2 % 
(953)
28.0 % 
(578)
41.9 %
50 aa 
4436 aa 





Picrophilus torridus DSM 9790 (ptor0)
Archaea
1535
45.2 %
(694)
59.5 % 
(914)
24.0 % 
(368)
36.0 %
24 aa 
1667 aa 





Thermoplasma acidophilum DSM1728 (taci0)
Archaea
1478
46.2 %
(683)
60.8 % 
(898)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium GSS1 (tvol0)
Archaea
1526
45.6 %
(696)
58.4 % 
(891)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Nanoarchaeum equitans Kin4-M (nequ0)
Archaea
536
39.4 %
(211)
54.7 % 
(293)
25.7 % 
(138)
31.6 %
54 aa 
2197 aa 





Corynebacterium diphtheriae NCTC13129 (cdip0)
Bacteria
2272
42.9 %
(974)
54.4 % 
(1235)
26.2 % 
(596)
53.5 %
31 aa 
2977 aa 





Corynebacterium efficiens YS-314 (ceff0)
Bacteria
2998
39.2 %
(1175)
53.3 % 
(1597)
25.2 % 
(754)
63.0 %
33 aa 
3022 aa 





Corynebacterium glutamicum ATCC 13032 (cglu0)
Bacteria
3099
39.9 %
(1236)
53.0 % 
(1644)
25.6 % 
(793)
53.8 %
33 aa 
2993 aa 





Corynebacterium glutamicum ATCC 13032 (cglu1)
Bacteria
3057
40.6 %
(1242)
54.0 % 
(1651)
26.3 % 
(803)
53.8 %
22 aa 
2996 aa 





Mycobacterium leprae TN (mlep0)
Bacteria
1605
47.8 %
(767)
59.0 % 
(947)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium avium subsp. paratuberculosis str. k10 (mavi0)
Bacteria
4350
44.1 %
(1919)
61.3 % 
(2667)
21.9 % 
(952)
69.3 %
37 aa 
6384 aa 





Mycobacterium tuberculosis H37Rv (mtub0)
Bacteria
3991
38.9 %
(1552)
54.1 % 
(2160)
21.9 % 
(874)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
36.4 %
(1523)
49.9 % 
(2088)
21.3 % 
(890)
65.6 %
30 aa 
4151 aa 





Mycobacterium bovis subsp. bovis AF2122/97 (mbov0)
Bacteria
3920
39.5 %
(1549)
54.2 % 
(2124)
22.0 % 
(861)
65.6 %
26 aa 
4151 aa 





Streptomyces avermitilis (save0)
Bacteria
7671
37.3 %
(2860)
54.8 % 
(4200)
22.9 % 
(1757)
70.7 %
33 aa 
7746 aa 





Streptomyces coelicolor A3(2) (scoe0)
Bacteria
8154
36.3 %
(2957)
53.9 % 
(4399)
22.6 % 
(1843)
72.0 %
19 aa 
7463 aa 





Bifidobacterium longum NCC2705 (blon0)
Bacteria
1731
47.5 %
(822)
59.7 % 
(1033)
25.0 % 
(432)
60.1 %
15 aa 
3172 aa 





Tropheryma whipplei TW08/27 (twhi0)
Bacteria
783
55.3 %
(433)
65.4 % 
(512)
30.5 % 
(239)
46.3 %
29 aa 
2308 aa 





Tropheryma whipplei str. Twist (twhi1)
Bacteria
808
53.6 %
(433)
64.0 % 
(517)
32.1 % 
(259)
46.3 %
39 aa 
2312 aa 





Aquifex aeolicus VF5 (aaeo0)
Bacteria
1553
51.5 %
(800)
64.3 % 
(998)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Bacteroides thetaiotaomicron VPI-5482 (bthe0)
Bacteria
4816
35.6 %
(1716)
54.5 % 
(2626)
32.4 % 
(1561)
42.8 %
32 aa 
2183 aa 





Porphyromonas gingivalis W83 (pgin0)
Bacteria
1909
38.7 %
(738)
53.7 % 
(1026)
27.0 % 
(516)
48.3 %
30 aa 
2316 aa 





Chlamydia muridarum Nigg (cmur0)
Bacteria
911
45.8 %
(417)
55.9 % 
(509)
27.1 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis D/UW-3/CX (ctra0)
Bacteria
894
46.9 %
(419)
56.7 % 
(507)
27.2 % 
(243)
41.3 %
45 aa 
1786 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1116
37.8 %
(422)
47.0 % 
(524)
31.4 % 
(350)
40.6 %
30 aa 
1826 aa 





Chlamydophila caviae GPIC (ccav0)
Bacteria
1005
42.9 %
(431)
52.6 % 
(529)
30.5 % 
(307)
39.2 %
30 aa 
3346 aa 





Chlamydophila pneumoniae CWL029 (cpne1)
Bacteria
1052
40.3 %
(424)
49.8 % 
(524)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
39.9 %
(426)
49.5 % 
(529)
31.2 % 
(333)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae TW-183 (cpne3)
Bacteria
1113
38.4 %
(427)
47.4 % 
(528)
30.6 % 
(341)
40.6 %
33 aa 
1826 aa 





Parachlamydia sp. UWE25 (para0)
Bacteria
2031
36.7 %
(746)
47.5 % 
(964)
25.9 % 
(526)
34.7 %
45 aa 
3181 aa 





Chlorobium tepidum TLS (ctep0)
Bacteria
2252
42.5 %
(958)
54.8 % 
(1233)
21.4 % 
(483)
56.5 %
30 aa 
1510 aa 





Gloeobacter violaceus PCC 7421 (gvio0)
Bacteria
4430
37.9 %
(1679)
52.9 % 
(2344)
24.1 % 
(1066)
62.0 %
28 aa 
3277 aa 





Synechococcus sp. WH 8102 (syne1)
Bacteria
2517
38.7 %
(973)
53.1 % 
(1337)
21.6 % 
(543)
59.4 %
31 aa 
10791 aa 





Synechocystis sp. PCC 6803 (syne0)
Bacteria
3569
38.5 %
(1373)
53.0 % 
(1892)
25.2 % 
(901)
47.7 %
29 aa 
4199 aa 





Thermosynechococcus elongatus BP-1 (telo0)
Bacteria
2475
42.4 %
(1050)
56.0 % 
(1386)
26.5 % 
(656)
53.9 %
29 aa 
1706 aa 





Nostoc sp. PCC 7120 (anab0)
Bacteria
6132
35.0 %
(2149)
48.4 % 
(2966)
25.6 % 
(1567)
41.3 %
17 aa 
4936 aa 





Prochlorococcus marinus MED4 (pmar0)
Bacteria
1712
45.3 %
(776)
58.2 % 
(996)
25.9 % 
(444)
30.8 %
32 aa 
1521 aa 





Prochlorococcus marinus MIT9313 (pmar1)
Bacteria
2265
40.0 %
(907)
52.7 % 
(1194)
24.6 % 
(558)
50.7 %
33 aa 
1765 aa 





Prochlorococcus marinus marinus CCMP1375 (pmar2)
Bacteria
1882
41.7 %
(784)
53.2 % 
(1002)
25.4 % 
(478)
36.4 %
30 aa 
1524 aa 





Deinococcus radiodurans R1 (drad0)
Bacteria
3102
40.2 %
(1248)
53.4 % 
(1658)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Thermus thermophilus HB27 (tthe0)
Bacteria
2210
47.1 %
(1041)
60.1 % 
(1328)
23.5 % 
(519)
69.4 %
27 aa 
2672 aa 





Bacillus halodurans C-125 (bhal0)
Bacteria
4066
43.8 %
(1779)
55.3 % 
(2249)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus anthracis str. Ames (bant0)
Bacteria
5311
37.8 %
(2008)
49.3 % 
(2618)
31.4 % 
(1666)
35.4 %
28 aa 
5017 aa 





Bacillus anthracis str. Ames 0581 (bant1)
Bacteria
5821
36.6 %
(2129)
48.3 % 
(2814)
30.9 % 
(1799)
35.4 %
28 aa 
5017 aa 





Bacillus anthracis str. Sterne (bant2)
Bacteria
5287
40.2 %
(2123)
52.9 % 
(2795)
31.8 % 
(1679)
35.4 %
35 aa 
5017 aa 





Bacillus cereus ATCC 14579 (bcer0)
Bacteria
5255
39.3 %
(2065)
51.3 % 
(2696)
30.2 % 
(1586)
35.3 %
18 aa 
5017 aa 





Bacillus cereus ATCC 10987 (bcer1)
Bacteria
5844
36.7 %
(2147)
48.2 % 
(2819)
31.3 % 
(1829)
35.5 %
30 aa 
3242 aa 





Bacillus thuringiensis serovar konkukian str. 97-27 (bthu0)
Bacteria
5117
40.8 %
(2088)
52.9 % 
(2705)
32.1 % 
(1644)
35.4 %
48 aa 
5017 aa 





Bacillus subtilis 168 (bsub0)
Bacteria
4106
44.3 %
(1819)
56.2 % 
(2306)
29.3 % 
(1202)
43.5 %
20 aa 
5488 aa 





Oceanobacillus iheyensis HTE831 (oihe0)
Bacteria
3496
45.7 %
(1597)
57.6 % 
(2012)
32.2 % 
(1127)
35.7 %
24 aa 
2373 aa 





Listeria innocua Clip11262 (linn0)
Bacteria
3043
44.7 %
(1359)
57.0 % 
(1733)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
48.3 %
(1376)
60.7 % 
(1727)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Listeria monocytogenes str. 4b F2365 (lmon1)
Bacteria
2821
47.7 %
(1347)
59.8 % 
(1688)
29.1 % 
(820)
38.0 %
28 aa 
2195 aa 





Staphylococcus aureus Mu50 (saur0)
Bacteria
2748
45.0 %
(1237)
55.9 % 
(1536)
27.6 % 
(758)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus N315 (saur1)
Bacteria
2624
47.3 %
(1241)
58.3 % 
(1529)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus MW2 (saur2)
Bacteria
2659
45.4 %
(1208)
56.3 % 
(1498)
28.4 % 
(756)
32.8 %
18 aa 
9904 aa 





Staphylococcus epidermidis ATCC 12228 (sepi0)
Bacteria
2485
44.1 %
(1097)
55.3 % 
(1374)
26.8 % 
(666)
32.0 %
25 aa 
9439 aa 





Staphylococcus aureus subsp. aureus MRSA252 (saur3)
Bacteria
2656
45.4 %
(1205)
56.6 % 
(1504)
27.7 % 
(737)
32.8 %
16 aa 
10746 aa 





Clostridium acetobutylicum ATCC824 (cace0)
Bacteria
3848
43.5 %
(1672)
56.9 % 
(2191)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium perfringens 13 (cper0)
Bacteria
2723
45.7 %
(1245)
57.6 % 
(1568)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Clostridium tetani E88 (ctet0)
Bacteria
2432
45.2 %
(1100)
57.6 % 
(1402)
30.3 % 
(738)
28.6 %
71 aa 
2838 aa 





Thermoanaerobacter tengcongensis MB4T (tten0)
Bacteria
2588
46.4 %
(1202)
58.1 % 
(1504)
27.6 % 
(715)
37.6 %
37 aa 
2862 aa 





Enterococcus faecalis V583 (efae0)
Bacteria
3265
38.5 %
(1258)
50.1 % 
(1635)
27.7 % 
(906)
37.4 %
22 aa 
3173 aa 





Lactobacillus johnsonii NCC 533 (ljoh0)
Bacteria
1821
46.5 %
(847)
58.2 % 
(1060)
29.0 % 
(529)
34.6 %
38 aa 
4734 aa 





Lactobacillus plantarum WCFS1 (lpla0)
Bacteria
3009
43.9 %
(1321)
57.2 % 
(1720)
27.9 % 
(840)
44.5 %
24 aa 
5289 aa 





Lactococcus lactis IL1403 (llac0)
Bacteria
2266
44.3 %
(1003)
58.3 % 
(1322)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus agalactiae (saga0)
Bacteria
2124
44.3 %
(941)
57.1 % 
(1213)
26.8 % 
(570)
35.6 %
23 aa 
2274 aa 





Streptococcus agalactiae NEM316 (saga1)
Bacteria
2094
45.9 %
(962)
58.9 % 
(1233)
28.8 % 
(603)
35.6 %
30 aa 
2066 aa 





Streptococcus mutans UA159 (smut0)
Bacteria
1960
47.1 %
(923)
60.7 % 
(1189)
27.3 % 
(535)
36.8 %
25 aa 
2724 aa 





Streptococcus pneumoniae R6 (spne0)
Bacteria
2094
43.6 %
(914)
55.6 % 
(1165)
25.4 % 
(531)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae TIGR4 (spne1)
Bacteria
2043
45.6 %
(932)
58.4 % 
(1194)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes SF370 (spyo0)
Bacteria
1696
45.6 %
(774)
58.6 % 
(994)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
43.6 %
(804)
56.7 % 
(1046)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Streptococcus pyogenes MGAS315 (spyo2)
Bacteria
1865
42.7 %
(796)
55.4 % 
(1033)
23.0 % 
(429)
38.6 %
38 aa 
1622 aa 





Streptococcus pyogenes SSI-1 (spyo3)
Bacteria
1861
42.2 %
(785)
54.6 % 
(1017)
22.9 % 
(426)
38.6 %
27 aa 
1623 aa 





Phytoplasma asteris, OY strain (past0)
Bacteria
754
47.3 %
(357)
58.2 % 
(439)
28.2 % 
(213)
27.7 %
33 aa 
1571 aa 





Mycoplasma gallisepticum R (mgal0)
Bacteria
726
44.5 %
(323)
54.5 % 
(396)
25.1 % 
(182)
31.5 %
37 aa 
1976 aa 





Mycoplasma genitalium G37 (mgen0)
Bacteria
480
52.3 %
(251)
66.0 % 
(317)
23.1 % 
(111)
31.7 %
37 aa 
1805 aa 





Mycoplasma mobile 163K (mmob0)
Bacteria
633
47.6 %
(301)
59.4 % 
(376)
23.4 % 
(148)
25.0 %
38 aa 
4727 aa 





Mycoplasma penetrans (mpen0)
Bacteria
1037
38.7 %
(401)
49.5 % 
(513)
27.9 % 
(289)
25.7 %
47 aa 
3317 aa 





Mycoplasma pneumoniae M129 (mpne0)
Bacteria
688
40.8 %
(281)
49.9 % 
(343)
23.0 % 
(158)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis UAB CTIP (mpul0)
Bacteria
782
44.0 %
(344)
54.2 % 
(424)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Mycoplasma mycoides subsp. mycoides SC (mmyc0)
Bacteria
1016
36.3 %
(369)
52.0 % 
(528)
28.1 % 
(286)
24.0 %
36 aa 
1972 aa 





Ureaplasma urealyticum (uure0)
Bacteria
611
42.9 %
(262)
53.0 % 
(324)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Fusobacterium nucleatum ATCC 25586 (fnuc0)
Bacteria
2067
41.6 %
(859)
53.6 % 
(1107)
25.8 % 
(534)
27.2 %
20 aa 
3165 aa 





Pirellula sp. 1 (rbal0)
Bacteria
7325
25.3 %
(1850)
37.3 % 
(2732)
23.0 % 
(1685)
55.4 %
35 aa 
8173 aa 





Caulobacter crescentus (ccre0)
Bacteria
3737
43.2 %
(1614)
58.4 % 
(2184)
22.9 % 
(854)
67.2 %
30 aa 
2479 aa 





Bradyrhizobium japonicum (bjap0)
Bacteria
8317
40.4 %
(3360)
56.6 % 
(4706)
24.7 % 
(2052)
64.1 %
30 aa 
5685 aa 





Rhodopseudomonas palustris (rpal0)
Bacteria
4821
44.7 %
(2154)
60.0 % 
(2893)
26.2 % 
(1264)
65.0 %
25 aa 
4335 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
45.4 %
(1453)
59.4 % 
(1900)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Brucella suis 1330 (bsui0)
Bacteria
3264
42.1 %
(1374)
54.3 % 
(1771)
23.5 % 
(767)
57.3 %
29 aa 
3420 aa 





Mesorhizobium loti MAFF303099 (mlot0)
Bacteria
7281
39.6 %
(2881)
54.9 % 
(3994)
22.7 % 
(1650)
62.5 %
30 aa 
3930 aa 





Agrobacterium tumefaciens C58 (atum0)
Bacteria
5301
44.0 %
(2332)
59.5 % 
(3155)
23.8 % 
(1263)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens C58 (Dupont) (atum1)
Bacteria
5402
43.6 %
(2353)
58.7 % 
(3171)
23.1 % 
(1246)
59.0 %
22 aa 
2831 aa 





Sinorhizobium meliloti 1021 (smel0)
Bacteria
6205
43.2 %
(2681)
58.8 % 
(3650)
23.8 % 
(1478)
62.2 %
31 aa 
2832 aa 





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
35.1 %
(482)
44.6 % 
(613)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia prowazekii Madrid E (rpro0)
Bacteria
834
51.1 %
(426)
62.7 % 
(523)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Wolbachia endosymbiont of Drosophila melanogaster (wend0)
Bacteria
1195
39.5 %
(472)
47.4 % 
(567)
24.7 % 
(295)
35.2 %
30 aa 
2843 aa 





Bordetella bronchiseptica RB50 (bbro0)
Bacteria
4994
46.2 %
(2308)
64.4 % 
(3214)
22.9 % 
(1146)
68.1 %
31 aa 
4218 aa 





Bordetella parapertussis (bpar0)
Bacteria
4185
47.9 %
(2004)
65.9 % 
(2757)
23.3 % 
(975)
68.1 %
37 aa 
4218 aa 





Bordetella pertussis Tohama I (bper0)
Bacteria
3447
46.0 %
(1587)
67.7 % 
(2332)
22.2 % 
(766)
67.7 %
37 aa 
4196 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5116
40.8 %
(2087)
55.8 % 
(2857)
25.0 % 
(1279)
67.0 %
20 aa 
6889 aa 





Chromobacterium violaceum ATCC 12472 (cvio0)
Bacteria
4385
41.4 %
(1815)
56.2 % 
(2464)
25.0 % 
(1097)
64.8 %
51 aa 
4130 aa 





Neisseria meningitidis MC58 (nmen0)
Bacteria
2025
43.2 %
(875)
53.8 % 
(1090)
23.2 % 
(470)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
42.4 %
(875)
52.3 % 
(1081)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Nitrosomonas europaea ATCC 19718 (neur0)
Bacteria
2461
43.9 %
(1080)
58.7 % 
(1444)
25.8 % 
(636)
50.7 %
42 aa 
3064 aa 





Bdellovibrio bacteriovorus HD100 (bbac0)
Bacteria
3583
36.5 %
(1307)
48.8 % 
(1749)
29.3 % 
(1050)
50.6 %
30 aa 
2828 aa 





Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough (dvul0)
Bacteria
3379
38.2 %
(1292)
51.1 % 
(1726)
22.9 % 
(774)
63.1 %
18 aa 
3038 aa 





Geobacter sulfurreducens PCA (gsul0)
Bacteria
3445
44.6 %
(1537)
59.2 % 
(2039)
28.4 % 
(978)
60.9 %
30 aa 
5899 aa 





Campylobacter jejuni  (cjej0)
Bacteria
1634
47.2 %
(772)
59.3 % 
(969)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Helicobacter hepaticus ATCC 51449 (hhep0)
Bacteria
1875
40.0 %
(750)
52.5 % 
(984)
28.5 % 
(535)
35.9 %
30 aa 
2894 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
39.1 %
(613)
51.0 % 
(799)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
41.9 %
(624)
53.8 % 
(802)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Wolinella succinogenes DSMZ 1740 (wsuc0)
Bacteria
2044
47.4 %
(968)
62.2 % 
(1272)
28.5 % 
(583)
48.5 %
33 aa 
2883 aa 





Shewanella oneidensis MR-1 (sone0)
Bacteria
4778
36.5 %
(1744)
50.7 % 
(2424)
25.5 % 
(1220)
45.9 %
30 aa 
5020 aa 





Buchnera aphidicola Sg (baph0)
Bacteria
552
69.4 %
(383)
77.5 % 
(428)
17.0 % 
(94)
25.3 %
38 aa 
1413 aa 





Buchnera aphidicola (Baizongia pistaciae) (baph1)
Bacteria
507
71.2 %
(361)
79.3 % 
(402)
18.5 % 
(94)
25.3 %
38 aa 
1404 aa 





Buchnera sp. APS (buch0)
Bacteria
574
70.9 %
(407)
79.8 % 
(458)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli K-12 MG1655 (ecol0)
Bacteria
4285
47.1 %
(2017)
59.1 % 
(2531)
27.3 % 
(1169)
50.7 %
14 aa 
2358 aa 





Escherichia coli O157:H7  (ecol1)
Bacteria
5447
39.4 %
(2147)
50.5 % 
(2751)
24.0 % 
(1309)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 EDL933 (ecol2)
Bacteria
5449
39.5 %
(2150)
50.9 % 
(2772)
24.3 % 
(1323)
50.4 %
9 aa 
5188 aa 





Escherichia coli CFT073 (ecol3)
Bacteria
5379
39.8 %
(2143)
50.4 % 
(2711)
25.1 % 
(1351)
50.5 %
14 aa 
3216 aa 





Photorhabdus luminescens laumondii TTO1 (plum0)
Bacteria
4683
38.2 %
(1791)
51.5 % 
(2410)
20.9 % 
(981)
42.8 %
30 aa 
16367 aa 





Salmonella Typhi CT18 (styp0)
Bacteria
4767
41.1 %
(1957)
52.2 % 
(2487)
25.8 % 
(1230)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4554
45.0 %
(2051)
56.9 % 
(2591)
27.2 % 
(1239)
52.2 %
14 aa 
5559 aa 





Salmonella enterica subsp. enterica serovar Typhi Ty2 (styp2)
Bacteria
4323
43.9 %
(1897)
55.3 % 
(2392)
26.7 % 
(1153)
52.1 %
13 aa 
3624 aa 





Shigella flexneri 2a 301 (sfle0)
Bacteria
4452
40.6 %
(1807)
54.1 % 
(2410)
25.6 % 
(1139)
50.7 %
13 aa 
1522 aa 





Shigella flexneri 2a str. 2457T (sfle1)
Bacteria
4068
42.6 %
(1735)
55.7 % 
(2266)
25.6 % 
(1043)
50.9 %
14 aa 
1522 aa 





Wigglesworthia brevipalpis (wbre0)
Bacteria
611
67.8 %
(414)
76.8 % 
(469)
23.7 % 
(145)
22.5 %
38 aa 
1405 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4083
41.8 %
(1707)
54.0 % 
(2204)
25.8 % 
(1054)
47.6 %
14 aa 
3705 aa 





Yersinia pestis KIM (ypes1)
Bacteria
4281
40.3 %
(1725)
51.9 % 
(2223)
25.8 % 
(1105)
47.7 %
14 aa 
3710 aa 





Yersinia pestis biovar Mediaevails str. 91001 (ypes2)
Bacteria
4142
41.7 %
(1728)
53.4 % 
(2210)
26.4 % 
(1092)
47.7 %
20 aa 
3710 aa 





Candidatus Blochmannia floridanus (bflo0)
Bacteria
583
70.7 %
(412)
79.4 % 
(463)
23.0 % 
(134)
27.4 %
38 aa 
1420 aa 





Coxiella burnetii RSA 493 (cbur0)
Bacteria
2045
37.8 %
(772)
48.0 % 
(981)
23.4 % 
(479)
42.6 %
30 aa 
1734 aa 





Haemophilus ducreyi 35000HP (hduc0)
Bacteria
1717
44.1 %
(758)
53.4 % 
(917)
24.9 % 
(427)
38.2 %
30 aa 
4919 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
54.1 %
(925)
64.6 % 
(1104)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Pasteurella multocida PM70 (pmul0)
Bacteria
2014
52.9 %
(1065)
64.7 % 
(1304)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Pseudomonas aeruginosa PAO1 (paer0)
Bacteria
5566
45.1 %
(2512)
61.3 % 
(3411)
26.8 % 
(1491)
66.6 %
10 aa 
5627 aa 





Pseudomonas putida KT2440 (pput0)
Bacteria
5350
43.6 %
(2334)
58.4 % 
(3127)
25.3 % 
(1356)
61.5 %
23 aa 
8682 aa 





Pseudomonas syringae pv. tomato str. DC3000 (psyr0)
Bacteria
5608
40.1 %
(2247)
55.2 % 
(3094)
23.8 % 
(1337)
58.3 %
24 aa 
6274 aa 





Photobacterium profundum ss9 (ppro0)
Bacteria
5413
39.2 %
(2121)
54.9 % 
(2974)
27.0 % 
(1460)
41.7 %
35 aa 
4684 aa 





Vibrio cholerae N16961 (vcho0)
Bacteria
3828
41.8 %
(1602)
54.3 % 
(2080)
27.4 % 
(1049)
47.5 %
26 aa 
4558 aa 





Vibrio parahaemolyticus RIMD 2210633 (vpar0)
Bacteria
4832
41.6 %
(2008)
54.4 % 
(2630)
27.2 % 
(1316)
45.4 %
14 aa 
6084 aa 





Vibrio vulnificus CMCP6 (vvul0)
Bacteria
4537
42.8 %
(1941)
57.7 % 
(2617)
25.6 % 
(1161)
46.7 %
20 aa 
5206 aa 





Vibrio vulnificus YJ016 (vvul1)
Bacteria
5028
39.3 %
(1978)
52.8 % 
(2653)
26.7 % 
(1341)
46.7 %
34 aa 
5206 aa 





Xanthomonas axonopodis pv. citri 306 (xaxo0)
Bacteria
4427
42.0 %
(1858)
56.6 % 
(2505)
24.8 % 
(1100)
64.7 %
30 aa 
4753 aa 





Xanthomonas campestris pv. campestris ATCC 33913 (xcam0)
Bacteria
4181
43.1 %
(1801)
57.9 % 
(2420)
25.3 % 
(1056)
65.1 %
21 aa 
3961 aa 





Xylella fastidiosa 9a5c (xfas0)
Bacteria
2832
33.3 %
(942)
43.7 % 
(1238)
24.7 % 
(700)
52.6 %
30 aa 
3455 aa 





Xylella fastidiosa Temecula1 (xfas1)
Bacteria
2036
44.5 %
(907)
56.1 % 
(1142)
25.6 % 
(522)
51.8 %
30 aa 
3457 aa 





Leptospira interrogans serovar lai str. 56601 (lint0)
Bacteria
4727
27.2 %
(1285)
38.4 % 
(1817)
26.5 % 
(1255)
35.0 %
30 aa 
3141 aa 





Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 (lint1)
Bacteria
3660
34.8 %
(1272)
48.5 % 
(1775)
31.5 % 
(1152)
35.0 %
37 aa 
3140 aa 





Borrelia burgdorferi (bbur0)
Bacteria
1639
26.1 %
(428)
34.3 % 
(562)
28.0 % 
(459)
28.2 %
30 aa 
2166 aa 





Treponema denticola ATCC 35405 (tden0)
Bacteria
2767
33.8 %
(934)
45.2 % 
(1251)
32.4 % 
(897)
37.9 %
30 aa 
3320 aa 





Treponema pallidum subsp. pallidum str. Nichols (tpal0)
Bacteria
1031
42.6 %
(439)
53.0 % 
(546)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima MSB8 (tmar0)
Bacteria
1846
49.9 %
(922)
62.2 % 
(1149)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Plasmodium falciparum 3D7 (pfal0)
Eukaryota
5271
28.8 %
(1516)
38.9 % 
(2051)
35.2 % 
(1856)
20.4 %
13 aa 
10589 aa 





Guillardia theta Nucleomorph (gthe0)
Eukaryota
632
45.3 %
(286)
51.6 % 
(326)
23.9 % 
(151)
26.4 %
29 aa 
2057 aa 





Leishmania major Friedlin (lmaj0)
Eukaryota
173
28.3 %
(49)
38.2 % 
(66)
25.4 % 
(44)
63.1 %
83 aa 
3112 aa 





Neurospora crassa (ncra0)
Eukaryota
10118
28.2 %
(2856)
39.8 % 
(4025)
20.4 % 
(2068)
-
9 aa 
10820 aa 





Saccharomyces cerevisiae (scer0)
Eukaryota
5868
40.2 %
(2358)
52.7 % 
(3093)
21.6 % 
(1270)
36.1 %
16 aa 
4910 aa 





Ashbya gossypii (agos0)
Eukaryota
4726
40.8 %
(1926)
54.1 % 
(2559)
20.1 % 
(949)
-
25 aa 
4899 aa 





Schizosaccharomyces pombe 972h- (spom0)
Eukaryota
5276
43.6 %
(2298)
56.3 % 
(2970)
20.9 % 
(1101)
36.1 %
14 aa 
4924 aa 





Drosophila melanogaster (dmel0)
Eukaryota
18759
45.3 %
(8507)
55.5 % 
(10419)
30.6 % 
(5737)
-
28 aa 
23015 aa 





Anopheles gambiae (agam0)
Eukaryota
13877
44.5 %
(6171)
55.3 % 
(7673)
25.3 % 
(3517)
-
20 aa 
8588 aa 





Xenopus tropicalis (xtro0)
Eukaryota
28382
49.9 %
(14160)
64.4 % 
(18276)
23.4 % 
(6636)
-
42 aa 
27000 aa 





Takifugu rubripes rubripes (trub0)
Eukaryota
37452
36.5 %
(13655)
43.7 % 
(16378)
16.6 % 
(6201)
-
4 aa 
5522 aa 





Danio rerio (drer0)
Eukaryota
30840
56.8 %
(17510)
66.9 % 
(20624)
26.0 % 
(8013)
-
26 aa 
10303 aa 





Gallus gallus (ggal0)
Eukaryota
27662
50.8 %
(14062)
60.6 % 
(16772)
25.5 % 
(7043)
-
15 aa 
6981 aa 





Homo sapiens (hsap0)
Eukaryota
36272
53.1 %
(19244)
62.1 % 
(22510)
26.7 % 
(9685)
-
20 aa 
19348 aa 





Homo sapiens (hsap1)
Eukaryota
39091
37.5 %
(14648)
46.7 % 
(18245)
20.2 % 
(7906)
-
13 aa 
3395 aa 





Homo sapiens (hsap2)
Eukaryota
27188
50.6 %
(13767)
59.2 % 
(16101)
27.8 % 
(7552)
-
16 aa 
34350 aa 





Homo sapiens cDNA (huge0)
Eukaryota
2037
49.2 %
(1003)
64.7 % 
(1318)
21.9 % 
(447)
-
73 aa 
4594 aa 





Pan troglodytes (ptro0)
Eukaryota
38769
44.1 %
(17081)
52.8 % 
(20475)
20.9 % 
(8102)
-
1 aa 
6531 aa 





Mus musculus (mmus0)
Eukaryota
30364
50.5 %
(15324)
59.8 % 
(18155)
28.1 % 
(8542)
-
18 aa 
7385 aa 





Rattus norvegicus (rnor0)
Eukaryota
27122
54.1 %
(14685)
63.7 % 
(17287)
28.0 % 
(7594)
-
16 aa 
7340 aa 





Ciona intestinalis (cint0)
Eukaryota
15865
43.6 %
(6923)
53.4 % 
(8474)
24.6 % 
(3901)
-
2 aa 
17232 aa 





Caenorhabditis briggsae (cbri0)
Eukaryota
14714
40.7 %
(5994)
51.2 % 
(7529)
36.2 % 
(5330)
-
22 aa 
7747 aa 





Caenorhabditis elegans (cele0)
Eukaryota
22246
32.9 %
(7330)
42.9 % 
(9534)
36.9 % 
(8204)
35.4%
16 aa 
13100 aa 





Encephalitozoon cuniculi (ecun0)
Eukaryota
1996
36.8 %
(735)
47.6 % 
(950)
20.6 % 
(412)
47.3 %
52 aa 
3436 aa 





Cyanidioschyzon merolae (cmer0)
Eukaryota
4772
41.4 %
(1974)
55.4 % 
(2646)
21.9 % 
(1043)
-
25 aa 
6020 aa 





Chlamydomonas reinhardtii (crei0)
Eukaryota
19909
21.9 %
(4356)
30.7 % 
(6119)
19.5 % 
(3875)
-
6 aa 
13501 aa 





Oryza sativa (japonica cultivar-group) (osat0)
Eukaryota
22287
20.3 %
(4518)
27.8 % 
(6187)
20.4 % 
(4544)
-
13 aa 
4190 aa 





Oryza sativa cDNA(japonica cultivar-group) (osat1)
Eukaryota
32071
35.7 %
(11435)
47.0 % 
(15059)
26.4 % 
(8470)
-
1 aa 
1921 aa 





Arabidopsis thaliana (atha0)
Eukaryota
29094
40.8 %
(11869)
55.2 % 
(16059)
27.3 % 
(7936)
36.0 %
19 aa 
5336 aa 





186 (bp180)
Viruses
46
17.4 %
(8)
19.6 % 
(9)
13.0 % 
(6)
53.1 %
58 aa 
812 aa 





44RR2.8t (bp441)
Viruses
252
16.7 %
(42)
22.6 % 
(57)
6.7 % 
(17)
43.9 %
32 aa 
1420 aa 





A511 (bpa50)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
36.7 %
106 aa 
562 aa 





Aa¦Õ23 (bpaa0)
Viruses
66
7.6 %
(5)
12.1 % 
(8)
19.7 % 
(13)
42.5 %
27 aa 
800 aa 





Aeh1 (bpae0)
Viruses
331
11.5 %
(38)
16.9 % 
(56)
11.2 % 
(37)
42.8 %
28 aa 
1358 aa 





Bcep781 (bpbc0)
Viruses
61
9.8 %
(6)
13.1 % 
(8)
4.9 % 
(3)
63.3 %
38 aa 
873 aa 





Bcep1 (bpbc1)
Viruses
71
7.0 %
(5)
11.3 % 
(8)
9.9 % 
(7)
636 %
41 aa 
824 aa 





Bcep43 (bpbc3)
Viruses
66
9.1 %
(6)
12.1 % 
(8)
7.6 % 
(5)
63.4 %
47 aa 
824 aa 





BcepMu (bpbc4)
Viruses
53
3.8 %
(2)
9.4 % 
(5)
15.1 % 
(8)
62.9 %
67 aa 
846 aa 





BcepB1A (bpbc5)
Viruses
58
5.2 %
(3)
13.8 % 
(8)
13.8 % 
(8)
54.5 %
53 aa 
919 aa 





Bxz1 (bpbx1)
Viruses
225
3.6 %
(8)
11.1 % 
(25)
8.4 % 
(19)
64.8 %
31 aa 
1370 aa 





ƒÓCTX (bpct0)
Viruses
47
2.1 %
(1)
8.5 % 
(4)
12.8 % 
(6)
62.6 %
35 aa 
904 aa 





EJ-1 (bpej0)
Viruses
73
4.1 %
(3)
11.0 % 
(8)
19.2 % 
(14)
39.6 %
34 aa 
748 aa 





ƒÓg1e (bpg10)
Viruses
49
4.1 %
(2)
14.3 % 
(7)
12.2 % 
(6)
42.7 %
49 aa 
1662 aa 





HF2 (bphf0)
Viruses
114
7.0 %
(8)
10.5 % 
(12)
6.1 % 
(7)
55.8 %
29 aa 
1288 aa 





HP1 (bphp0)
Viruses
41
7.3 %
(3)
14.6 % 
(6)
12.2 % 
(5)
40.0 %
61 aa 
925 aa 





HP2 (bphp1)
Viruses
36
5.6 %
(2)
11.1 % 
(4)
13.9 % 
(5)
39.9 %
61 aa 
910 aa 





K139 (bpk10)
Viruses
44
2.3 %
(1)
11.4 % 
(5)
6.8 % 
(3)
48.9 %
53 aa 
800 aa 





KVP40 (bpkv0)
Viruses
381
10.8 %
(41)
17.3 % 
(66)
11.3 % 
(43)
42.6 %
36 aa 
1256 aa 





L-413C (bpl40)
Viruses
40
5.0 %
(2)
10.0 % 
(4)
17.5 % 
(7)
52.1 %
56 aa 
913 aa 





Mu (bpmu0)
Viruses
53
9.4 %
(5)
11.3 % 
(6)
11.3 % 
(6)
52.1 %
39 aa 
690 aa 





P1 (bpp11)
Viruses
110
7.3 %
(8)
11.8 % 
(13)
9.1 % 
(10)
47.3 %
31 aa 
2255 aa 





P2 (bpp20)
Viruses
42
4.8 %
(2)
9.5 % 
(4)
14.3 % 
(6)
50.2 %
56 aa 
815 aa 





P4 (bpp40)
Viruses
12
8.3 %
(1)
16.7 % 
(2)
0.0 % 
(0)
49.5 %
88 aa 
777 aa 





PA01 (bppa0)
Viruses
34
11.8 %
(4)
11.8 % 
(4)
8.8 % 
(3)
 %
23 aa 
745 aa 





ƒÓKZ (bpph0)
Viruses
306
4.2 %
(13)
8.8 % 
(27)
11.8 % 
(36)
36.8 %
63 aa 
2237 aa 





ƒÓCh1 (bpph1)
Viruses
98
7.1 %
(7)
10.2 % 
(10)
5.1 % 
(5)
61.9 %
54 aa 
581 aa 





PSP3 (bpps2)
Viruses
42
7.1 %
(3)
11.9 % 
(5)
9.5 % 
(4)
52.8 %
60 aa 
814 aa 





RB69 (bprb0)
Viruses
256
16.0 %
(41)
22.7 % 
(58)
9.4 % 
(24)
 %
19 aa 
1277 aa 





RB49 (bprb1)
Viruses
272
13.2 %
(36)
20.2 % 
(55)
11.0 % 
(30)
 %
32 aa 
1246 aa 





Rd (bprd0)
Viruses
47
8.5 %
(4)
14.9 % 
(7)
8.5 % 
(4)
 %
38 aa 
731 aa 





RM378 (bprm0)
Viruses
146
4.8 %
(7)
12.3 % 
(18)
9.6 % 
(14)
42.5 %
27 aa 
1019 aa 





S-PM2 (bpsp4)
Viruses
241
10.8 %
(26)
17.4 % 
(42)
6.6 % 
(16)
 %
25 aa 
3779 aa 





T4 (bpt40)
Viruses
278
16.9 %
(47)
20.9 % 
(58)
10.4 % 
(29)
35.3 %
26 aa 
1289 aa 





VHML (bpvh0)
Viruses
57
8.8 %
(5)
15.8 % 
(9)
7.0 % 
(4)
50.6 %
33 aa 
1023 aa 





WƒÓ
 (bpwp0)
Viruses
44
6.8 %
(3)
9.1 % 
(4)
11.4 % 
(5)
51.7 %
56 aa 
815 aa 





44AHJD (bp440)
Viruses
21
0.0 %
(0)
4.8 % 
(1)
9.5 % 
(2)
29.6 %
55 aa 
755 aa 





APSE-1 (bpap0)
Viruses
54
9.3 %
(5)
14.8 % 
(8)
18.5 % 
(10)
43.9 %
73 aa 
993 aa 





B103 (bpb11)
Viruses
17
35.3 %
(6)
41.2 % 
(7)
5.9 % 
(1)
37.7 %
100 aa 
860 aa 





Bcep22 (bpbc2)
Viruses
78
6.4 %
(5)
16.7 % 
(13)
9.0 % 
(7)
65.3 %
32 aa 
4602 aa 





BIP-1 (bpbi7)
Viruses
48
12.5 %
(6)
20.8 % 
(10)
8.3 % 
(4)
65.4 %
56 aa 
2052 aa 





BMP-1 (bpbm0)
Viruses
47
12.8 %
(6)
21.3 % 
(10)
8.5 % 
(4)
65.4 %
56 aa 
2052 aa 





BPP-1 (bpbp0)
Viruses
49
12.2 %
(6)
20.4 % 
(10)
10.2 % 
(5)
65.4 %
56 aa 
2052 aa 





C1 (bpc10)
Viruses
20
0.0 %
(0)
5.0 % 
(1)
5.0 % 
(1)
34.6 %
51 aa 
784 aa 





Cp-1 (bpcp0)
Viruses
28
7.1 %
(2)
7.1 % 
(2)
14.3 % 
(4)
38.9 %
62 aa 
586 aa 





rb15 (bpep0)
Viruses
49
4.1 %
(2)
14.3 % 
(7)
18.4 % 
(9)
50.8 %
35 aa 
1070 aa 





GA-1 (bpga0)
Viruses
35
17.1 %
(6)
20.0 % 
(7)
22.9 % 
(8)
34.7 %
25 aa 
740 aa 





gh-1 (bpgh0)
Viruses
42
19.0 %
(8)
26.2 % 
(11)
7.1 % 
(3)
57.4 %
25 aa 
1392 aa 





H-19B (bph10)
Viruses
22
9.1 %
(2)
18.2 % 
(4)
13.6 % 
(3)
45.9 %
44 aa 
315 aa 





P1 (bpp10)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





P22 (bpp21)
Viruses
36
16.7 %
(6)
19.4 % 
(7)
5.6 % 
(2)
47.1 %
47 aa 
667 aa 





P60 (bpp60)
Viruses
80
11.2 %
(9)
16.2 % 
(13)
6.2 % 
(5)
53.2 %
40 aa 
680 aa 





PaP3 (bppa1)
Viruses
69
8.7 %
(6)
14.5 % 
(10)
11.6 % 
(8)
52.1 %
26 aa 
1056 aa 





PaP2 (bppa2)
Viruses
58
1.7 %
(1)
5.2 % 
(3)
13.8 % 
(8)
45.4 %
48 aa 
1849 aa 





ƒÓYeO3-12 (bpph2)
Viruses
59
18.6 %
(11)
22.0 % 
(13)
15.3 % 
(9)
50.6 %
25 aa 
1320 aa 





ƒÓA1122 (bpphD)
Viruses
50
18.0 %
(9)
20.0 % 
(10)
10.0 % 
(5)
48.3 %
27 aa 
1318 aa 





P68 (bpphE)
Viruses
22
4.5 %
(1)
9.1 % 
(2)
9.1 % 
(2)
29.3 %
55 aa 
755 aa 





ƒÓKMV (bpphF)
Viruses
48
10.4 %
(5)
27.1 % 
(13)
12.5 % 
(6)
62.3 %
64 aa 
1337 aa 





PZA (bppz0)
Viruses
27
18.5 %
(5)
22.2 % 
(6)
11.1 % 
(3)
39.7 %
37 aa 
854 aa 





V (bpsf1)
Viruses
53
11.3 %
(6)
17.0 % 
(9)
13.2 % 
(7)
50.8 %
56 aa 
611 aa 





Sf6 (bpsf2)
Viruses
66
15.2 %
(10)
16.7 % 
(11)
12.1 % 
(8)
47.5 %
27 aa 
708 aa 





SIO1 (bpsi0)
Viruses
34
0.0 %
(0)
0.0 % 
(0)
11.8 % 
(4)
46.2 %
77 aa 
1484 aa 





SP6 (bpsp0)
Viruses
20
20.0 %
(4)
30.0 % 
(6)
5.0 % 
(1)
46.1 %
42 aa 
874 aa 





ST64B (bpst0)
Viruses
56
12.5 %
(7)
17.9 % 
(10)
8.9 % 
(5)
51.0 %
54 aa 
642 aa 





ST64T (bpst1)
Viruses
65
12.3 %
(8)
16.9 % 
(11)
10.8 % 
(7)
47.5 %
37 aa 
725 aa 





T3 (bpt30)
Viruses
44
18.2 %
(8)
22.7 % 
(10)
15.9 % 
(7)
49.9 %
25 aa 
884 aa 





T7 (bpt70)
Viruses
58
17.2 %
(10)
19.0 % 
(11)
12.1 % 
(7)
48.4 %
29 aa 
1318 aa 





VpV262 (bpvp0)
Viruses
67
1.5 %
(1)
7.5 % 
(5)
9.0 % 
(6)
49.5 %
46 aa 
1536 aa 





VP5 (bpvp1)
Viruses
12
33.3 %
(4)
41.7 % 
(5)
0.0 % 
(0)
50.5 %
105 aa 
782 aa 





VP2 (bpvp2)
Viruses
14
21.4 %
(3)
35.7 % 
(5)
0.0 % 
(0)
50.6 %
105 aa 
782 aa 





¦Õ4795 (bp470)
Viruses
48
10.4 %
(5)
14.6 % 
(7)
14.6 % 
(7)
50.6 %
25 aa 
645 aa 





77 (bp770)
Viruses
69
7.2 %
(5)
13.0 % 
(9)
10.1 % 
(7)
33.5 %
33 aa 
1509 aa 





933W (bp930)
Viruses
80
8.8 %
(7)
13.8 % 
(11)
12.5 % 
(10)
49.4 %
51 aa 
2806 aa 





A118 (bpa10)
Viruses
72
2.8 %
(2)
13.9 % 
(10)
13.9 % 
(10)
36.1 %
21 aa 
1794 aa 





B1 (bpb10)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
36.8 %
65 aa 
273 aa 





Barnyard (bpba0)
Viruses
109
0.9 %
(1)
5.5 % 
(6)
9.2 % 
(10)
57.3 %
44 aa 
2047 aa 





BF23 (bpbf0)
Viruses
8
12.5 %
(1)
25.0 % 
(2)
12.5 % 
(1)
38.5 %
75 aa 
595 aa 





bIL170 (bpbi0)
Viruses
64
1.6 %
(1)
7.8 % 
(5)
10.9 % 
(7)
34.3 %
33 aa 
916 aa 





bIL285 (bpbi1)
Viruses
62
8.1 %
(5)
12.9 % 
(8)
9.7 % 
(6)
35.2 %
42 aa 
894 aa 





bIL286 (bpbi2)
Viruses
61
6.6 %
(4)
16.4 % 
(10)
13.1 % 
(8)
35.3 %
32 aa 
1640 aa 





bIL309 (bpbi3)
Viruses
56
5.4 %
(3)
12.5 % 
(7)
14.3 % 
(8)
35.7 %
40 aa 
1441 aa 





bIL310 (bpbi4)
Viruses
29
0.0 %
(0)
17.2 % 
(5)
10.3 % 
(3)
35.9 %
28 aa 
542 aa 





bIL311 (bpbi5)
Viruses
22
13.6 %
(3)
27.3 % 
(6)
9.1 % 
(2)
34.2 %
38 aa 
489 aa 





bIL312 (bpbi6)
Viruses
27
3.7 %
(1)
14.8 % 
(4)
11.1 % 
(3)
33.0 %
46 aa 
480 aa 





BK5-T (bpbk0)
Viruses
63
6.3 %
(4)
14.3 % 
(9)
15.9 % 
(10)
35.0 %
42 aa 
1904 aa 





Bxb1 (bpbx0)
Viruses
86
7.0 %
(6)
14.0 % 
(12)
12.8 % 
(11)
63.6 %
31 aa 
823 aa 





Bxz2 (bpbx2)
Viruses
86
8.1 %
(7)
17.4 % 
(15)
14.0 % 
(12)
64.2 %
20 aa 
1008 aa 





c2 (bpc20)
Viruses
39
0.0 %
(0)
7.7 % 
(3)
15.4 % 
(6)
36.3 %
22 aa 
706 aa 





Che8 (bpch0)
Viruses
112
1.8 %
(2)
9.8 % 
(11)
8.9 % 
(10)
61.3 %
31 aa 
1188 aa 





Che9c (bpch1)
Viruses
84
2.4 %
(2)
9.5 % 
(8)
16.7 % 
(14)
65.4 %
44 aa 
1213 aa 





Che9d (bpch2)
Viruses
111
4.5 %
(5)
10.8 % 
(12)
7.2 % 
(8)
61.0 %
34 aa 
1183 aa 





CJW1 (bpcj0)
Viruses
141
8.5 %
(12)
12.8 % 
(18)
7.1 % 
(10)
63.1 %
32 aa 
1576 aa 





Corndog (bpco0)
Viruses
122
3.3 %
(4)
9.8 % 
(12)
13.1 % 
(16)
65.4 %
33 aa 
1461 aa 





D29 (bpd20)
Viruses
79
8.9 %
(7)
20.3 % 
(16)
10.1 % 
(8)
63.5 %
28 aa 
837 aa 





D3 (bpd30)
Viruses
94
8.5 %
(8)
9.6 % 
(9)
12.8 % 
(12)
57.8 %
32 aa 
909 aa 





D3112 (bpd31)
Viruses
55
5.5 %
(3)
9.1 % 
(5)
10.9 % 
(6)
64.3 %
34 aa 
735 aa 





HK022 (bphk0)
Viruses
57
15.8 %
(9)
19.3 % 
(11)
10.5 % 
(6)
49.5 %
50 aa 
1183 aa 





HK620 (bphk1)
Viruses
58
12.1 %
(7)
13.8 % 
(8)
8.6 % 
(5)
46.7 %
27 aa 
722 aa 





HK97 (bphk2)
Viruses
61
16.4 %
(10)
21.3 % 
(13)
11.5 % 
(7)
49.8 %
32 aa 
1296 aa 





2389 (bpl20)
Viruses
57
7.0 %
(4)
14.0 % 
(8)
12.3 % 
(7)
34.7 %
48 aa 
1026 aa 





L5 (bpl50)
Viruses
85
8.2 %
(7)
15.3 % 
(13)
7.1 % 
(6)
62.3 %
37 aa 
837 aa 





ă
 (bpla0)
Viruses
66
21.2 %
(14)
31.8 % 
(21)
10.6 % 
(7)
49.9 %
28 aa 
1132 aa 





A2 (bplc0)
Viruses
61
4.9 %
(3)
13.1 % 
(8)
8.2 % 
(5)
44.9 %
59 aa 
1621 aa 





Lj928 (bplj0)
Viruses
50
4.0 %
(2)
16.0 % 
(8)
12.0 % 
(6)
34.7 %
48 aa 
1544 aa 





Lj965 (bplj1)
Viruses
46
6.5 %
(3)
17.4 % 
(8)
13.0 % 
(6)
35.1 %
49 aa 
2021 aa 





N15 (bpn10)
Viruses
60
10.0 %
(6)
23.3 % 
(14)
6.7 % 
(4)
51.2 %
18 aa 
1324 aa 





Omega (bpom0)
Viruses
237
6.3 %
(15)
10.5 % 
(25)
9.3 % 
(22)
61.4 %
22 aa 
1599 aa 





P27 (bpp22)
Viruses
58
10.3 %
(6)
17.2 % 
(10)
12.1 % 
(7)
49.4 %
51 aa 
649 aa 





P335 (bpp30)
Viruses
49
10.2 %
(5)
16.3 % 
(8)
10.2 % 
(5)
35.4 %
54 aa 
1711 aa 





PG1 (bppg0)
Viruses
100
3.0 %
(3)
9.0 % 
(9)
10.0 % 
(10)
66.5 %
45 aa 
1932 aa 





ƒÓ105 (bpph3)
Viruses
51
5.9 %
(3)
17.6 % 
(9)
11.8 % 
(6)
42.7 %
56 aa 
1018 aa 





ƒÓC31 (bpph4)
Viruses
55
5.5 %
(3)
16.4 % 
(9)
14.5 % 
(8)
63.6 %
41 aa 
729 aa 





ƒÓ3626 (bpph5)
Viruses
50
20.0 %
(10)
28.0 % 
(14)
14.0 % 
(7)
28.4 %
39 aa 
983 aa 





ƒÓE125 (bpph6)
Viruses
71
2.8 %
(2)
16.9 % 
(12)
11.3 % 
(8)
61.2 %
43 aa 
1354 aa 





ƒÓETA (bpph7)
Viruses
66
6.1 %
(4)
15.2 % 
(10)
13.6 % 
(9)
35.4 %
48 aa 
989 aa 





ƒÓNIH1.1 (bpph8)
Viruses
55
7.3 %
(4)
14.5 % 
(8)
12.7 % 
(7)
38.6 %
49 aa 
1086 aa 





ƒÓPV83 (bpph9)
Viruses
65
9.2 %
(6)
16.9 % 
(11)
13.8 % 
(9)
33.5 %
46 aa 
1313 aa 





ƒÓSLT (bpphA)
Viruses
62
12.9 %
(8)
22.6 % 
(14)
14.5 % 
(9)
33.3 %
35 aa 
1374 aa 





ƒÓadh (bpphB)
Viruses
63
9.5 %
(6)
15.9 % 
(10)
12.7 % 
(8)
35.6 %
49 aa 
1487 aa 





ƒÓBT1 (bpphC)
Viruses
55
5.5 %
(3)
16.4 % 
(9)
16.4 % 
(9)
62.8 %
46 aa 
808 aa 





ƒÓ11 (bpphH)
Viruses
53
3.8 %
(2)
17.0 % 
(9)
9.4 % 
(5)
34.5 %
57 aa 
910 aa 





ƒÓ12 (bpphI)
Viruses
49
12.2 %
(6)
28.6 % 
(14)
4.1 % 
(2)
33.3 %
54 aa 
2066 aa 





ƒÓ13 (bpphJ)
Viruses
49
6.1 %
(3)
14.3 % 
(7)
18.4 % 
(9)
33.5 %
52 aa 
1550 aa 





ƒÓKO2 (bppk0)
Viruses
64
9.4 %
(6)
17.2 % 
(11)
9.4 % 
(6)
51.5 %
33 aa 
3433 aa 





ƒÓLC3 (bppl0)
Viruses
51
7.8 %
(4)
13.7 % 
(7)
9.8 % 
(5)
35.5 %
52 aa 
843 aa 





ƒÕM2 (bpps0)
Viruses
31
0.0 %
(0)
6.5 % 
(2)
6.5 % 
(2)
46.3 %
90 aa 
1186 aa 





ƒÕM100 (bpps1)
Viruses
37
5.4 %
(2)
8.1 % 
(3)
10.8 % 
(4)
45.7 %
85 aa 
1157 aa 





PY54 (bppy0)
Viruses
67
4.5 %
(3)
16.4 % 
(11)
9.0 % 
(6)
44.6 %
54 aa 
1330 aa 





r1t (bpr10)
Viruses
50
8.0 %
(4)
14.0 % 
(7)
14.0 % 
(7)
35.5 %
54 aa 
667 aa 





Rosebush (bpro0)
Viruses
90
4.4 %
(4)
11.1 % 
(10)
12.2 % 
(11)
69.0 %
37 aa 
1882 aa 





PVL (bpsa0)
Viruses
62
8.1 %
(5)
19.4 % 
(12)
17.7 % 
(11)
33.6 %
43 aa 
759 aa 





Sfi11 (bpsf0)
Viruses
25
4.0 %
(1)
4.0 % 
(1)
12.0 % 
(3)
38.6 %
53 aa 
1510 aa 





sk1 (bpsk0)
Viruses
54
5.6 %
(3)
7.4 % 
(4)
11.1 % 
(6)
34.5 %
39 aa 
999 aa 





SPƒÀc2 (bpsp1)
Viruses
185
9.7 %
(18)
19.5 % 
(36)
15.1 % 
(28)
34.6 %
21 aa 
2285 aa 





SPP1 (bpsp2)
Viruses
106
5.7 %
(6)
11.3 % 
(12)
23.6 % 
(25)
43.7 %
51 aa 
846 aa 





MM1 (bpsp3)
Viruses
53
11.3 %
(6)
15.1 % 
(8)
11.3 % 
(6)
38.4 %
57 aa 
1989 aa 





7201 (bpst2)
Viruses
46
8.7 %
(4)
19.6 % 
(9)
10.9 % 
(5)
38.7 %
47 aa 
1554 aa 





DT1 (bpst3)
Viruses
47
4.3 %
(2)
17.0 % 
(8)
4.3 % 
(2)
39.1 %
36 aa 
1278 aa 





O1205 (bpst4)
Viruses
57
3.5 %
(2)
10.5 % 
(6)
8.8 % 
(5)
38.3 %
42 aa 
1517 aa 





Sfi19 (bpst5)
Viruses
45
6.7 %
(3)
22.2 % 
(10)
8.9 % 
(4)
38.3 %
40 aa 
1626 aa 





Sfi21 (bpst6)
Viruses
50
4.0 %
(2)
22.0 % 
(11)
12.0 % 
(6)
37.6 %
48 aa 
1560 aa 





Stx2 (bpst7)
Viruses
166
4.2 %
(7)
7.8 % 
(13)
17.5 % 
(29)
49.4 %
33 aa 
2806 aa 





Stx1 converting bacteriophage (bpst8)
Viruses
167
4.8 %
(8)
7.8 % 
(13)
16.8 % 
(28)
49.7 %
42 aa 
2806 aa 





Stx2 converting bacteriophage II (bpst9)
Viruses
170
5.3 %
(9)
8.2 % 
(14)
18.2 % 
(31)
49.9 %
41 aa 
2576 aa 





T1 (bpt10)
Viruses
78
2.6 %
(2)
9.0 % 
(7)
12.8 % 
(10)
45.6 %
36 aa 
1172 aa 





T5 (bpt50)
Viruses
162
11.1 %
(18)
16.7 % 
(27)
15.4 % 
(25)
39.3 %
27 aa 
1396 aa 





TM4 (bptm0)
Viruses
89
3.4 %
(3)
7.9 % 
(7)
12.4 % 
(11)
68.1 %
29 aa 
1229 aa 





TP901-1 (bptp0)
Viruses
56
10.7 %
(6)
14.3 % 
(8)
7.1 % 
(4)
35.4 %
47 aa 
937 aa 





Tuc2009 (bptu0)
Viruses
56
12.5 %
(7)
17.9 % 
(10)
8.9 % 
(5)
36.2 %
32 aa 
1025 aa 





ul36 (bpul0)
Viruses
58
8.6 %
(5)
13.8 % 
(8)
13.8 % 
(8)
35.8 %
50 aa 
908 aa 





VT2-Sa (bpvt0)
Viruses
82
9.8 %
(8)
15.9 % 
(13)
13.4 % 
(11)
49.9 %
42 aa 
2806 aa 





VWB (bpvw0)
Viruses
61
1.6 %
(1)
9.8 % 
(6)
9.8 % 
(6)
71.1 %
51 aa 
1440 aa 





ƒÓ1026b (bpphG)
Viruses
83
3.6 %
(3)
14.5 % 
(12)
12.0 % 
(10)
60.7 %
35 aa 
1354 aa 





BcepC6B (bpbc6)
Viruses
46
19.6 %
(9)
26.1 % 
(12)
13.0 % 
(6)
65.2 %
49 aa 
888 aa 





PM2 (bppm0)
Viruses
22
4.5 %
(1)
9.1 % 
(2)
31.8 % 
(7)
42.2 %
30 aa 
634 aa 





PRD1 (bppr0)
Viruses
22
13.6 %
(3)
18.2 % 
(4)
36.4 % 
(8)
48.1 %
42 aa 
591 aa 






DATE May 19 2004

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf 






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.





ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.





Aeropyrum pernix K1 (aper0)
Archaea
2694
21.0 %
(567)
29.6 % 
(797)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Sulfolobus solfataricus P2 (ssol0)
Archaea
2994
32.4 %
(971)
46.5 % 
(1393)
23.8 % 
(712)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii 7 (stok0)
Archaea
2826
32.1 %
(906)
44.7 % 
(1264)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum IM2 (paer1)
Archaea
2605
27.6 %
(720)
40.9 % 
(1065)
25.9 % 
(674)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus DSM4304 (aful0)
Archaea
2407
37.6 %
(904)
51.8 % 
(1248)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Methanosarcina acetivorans C2A (mace0)
Archaea
4544
31.9 %
(1450)
47.4 % 
(2154)
27.7 % 
(1260)
42.7 %
41 aa 
4226 aa 





Methanosarcina mazei Goe1 (mmaz0)
Archaea
3371
33.1 %
(1117)
48.9 % 
(1648)
24.1 % 
(812)
41.5 %
16 aa 
1898 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
32.1 %
(837)
46.3 % 
(1205)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Methanobacterium thermoautotrophicum Delta H (mthe0)
Archaea
1869
39.4 %
(737)
53.7 % 
(1004)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanococcus jannaschii DSM2661 (mjan0)
Archaea
1770
35.9 %
(635)
49.8 % 
(881)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanococcus maripaludis S2 (mmar0)
Archaea
1722
48.9 %
(842)
60.4 % 
(1040)
23.4 % 
(403)
33.1 %
32 aa 
2076 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
33.4 %
(564)
47.1 % 
(795)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Pyrococcus abyssi Orsay (paby0)
Archaea
1784
40.8 %
(728)
53.6 % 
(957)
24.7 % 
(441)
44.7 %
18 aa 
2122 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
37.8 %
(781)
50.7 % 
(1047)
24.8 % 
(513)
40.8 %
21 aa 
1740 aa 





Pyrococcus horikoshii OT3 (phor0)
Archaea
2061
33.1 %
(683)
43.2 % 
(891)
28.0 % 
(578)
41.9 %
50 aa 
4436 aa 





Thermoplasma acidophilum DSM1728 (taci0)
Archaea
1478
42.7 %
(631)
57.7 % 
(853)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium GSS1 (tvol0)
Archaea
1526
42.3 %
(646)
55.8 % 
(852)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Nanoarchaeum equitans Kin4-M (nequ0)
Archaea
536
36.0 %
(193)
50.6 % 
(271)
25.7 % 
(138)
31.6 %
54 aa 
2197 aa 





Corynebacterium diphtheriae NCTC13129 (cdip0)
Bacteria
2272
40.4 %
(919)
52.2 % 
(1187)
26.2 % 
(596)
53.5 %
31 aa 
2977 aa 





Corynebacterium efficiens YS-314 (ceff0)
Bacteria
2998
36.5 %
(1095)
51.1 % 
(1533)
25.2 % 
(754)
63.0 %
33 aa 
3022 aa 





Corynebacterium glutamicum ATCC 13032 (cglu0)
Bacteria
3099
37.3 %
(1155)
51.1 % 
(1584)
25.6 % 
(793)
53.8 %
33 aa 
2993 aa 





Mycobacterium leprae TN (mlep0)
Bacteria
1605
45.0 %
(722)
57.8 % 
(927)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium tuberculosis H37Rv (mtub0)
Bacteria
3918
36.8 %
(1442)
52.2 % 
(2046)
22.0 % 
(861)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
34.0 %
(1425)
47.8 % 
(2003)
21.3 % 
(890)
65.6 %
30 aa 
4151 aa 





Mycobacterium bovis subsp. bovis AF2122/97 (mbov0)
Bacteria
3920
36.9 %
(1447)
51.8 % 
(2029)
22.0 % 
(861)
65.6 %
26 aa 
4151 aa 





Streptomyces avermitilis (save0)
Bacteria
7671
34.9 %
(2678)
52.5 % 
(4025)
22.9 % 
(1757)
70.7 %
33 aa 
7746 aa 





Streptomyces coelicolor A3(2) (scoe0)
Bacteria
8154
33.9 %
(2765)
51.8 % 
(4224)
22.6 % 
(1843)
72.0 %
19 aa 
7463 aa 





Bifidobacterium longum NCC2705 (blon0)
Bacteria
1731
45.3 %
(785)
57.4 % 
(993)
25.0 % 
(432)
60.1 %
15 aa 
3172 aa 





Tropheryma whipplei TW08/27 (twhi0)
Bacteria
783
52.9 %
(414)
64.0 % 
(501)
30.5 % 
(239)
46.3 %
29 aa 
2308 aa 





Tropheryma whipplei str. Twist (twhi1)
Bacteria
808
51.4 %
(415)
62.5 % 
(505)
32.1 % 
(259)
46.3 %
39 aa 
2312 aa 





Aquifex aeolicus VF5 (aaeo0)
Bacteria
1553
48.2 %
(748)
60.5 % 
(940)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Bacteroides thetaiotaomicron VPI-5482 (bthe0)
Bacteria
4816
33.1 %
(1592)
51.5 % 
(2479)
32.4 % 
(1561)
42.8 %
32 aa 
2183 aa 





Porphyromonas gingivalis W83 (pgin0)
Bacteria
1909
36.6 %
(698)
50.1 % 
(956)
27.0 % 
(516)
48.3 %
30 aa 
2316 aa 





Chlamydia muridarum Nigg (cmur0)
Bacteria
911
42.9 %
(391)
53.3 % 
(486)
27.1 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis D/UW-3/CX (ctra0)
Bacteria
894
43.7 %
(391)
54.7 % 
(489)
27.2 % 
(243)
41.3 %
45 aa 
1786 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1116
35.3 %
(394)
44.3 % 
(494)
31.4 % 
(350)
40.6 %
30 aa 
1826 aa 





Chlamydophila caviae GPIC (ccav0)
Bacteria
1005
40.5 %
(407)
50.5 % 
(508)
30.5 % 
(307)
39.2 %
30 aa 
3346 aa 





Chlamydophila pneumoniae CWL029 (cpne1)
Bacteria
1052
37.6 %
(396)
47.1 % 
(495)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
37.2 %
(398)
46.9 % 
(501)
31.2 % 
(333)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae TW-183 (cpne3)
Bacteria
1113
35.9 %
(400)
45.0 % 
(501)
30.6 % 
(341)
40.6 %
33 aa 
1826 aa 





Chlorobium tepidum TLS (ctep0)
Bacteria
2252
39.8 %
(897)
52.3 % 
(1177)
21.4 % 
(483)
56.5 %
30 aa 
1510 aa 





Gloeobacter violaceus PCC 7421 (gvio0)
Bacteria
4430
35.4 %
(1569)
50.3 % 
(2230)
24.1 % 
(1066)
62.0 %
28 aa 
3277 aa 





Synechococcus sp. WH 8102 (syne1)
Bacteria
2517
35.9 %
(903)
49.9 % 
(1256)
21.6 % 
(543)
59.4 %
31 aa 
10791 aa 





Synechocystis sp. PCC 6803 (syne0)
Bacteria
3167
39.1 %
(1237)
53.4 % 
(1691)
26.6 % 
(844)
47.7 %
29 aa 
4199 aa 





Thermosynechococcus elongatus BP-1 (telo0)
Bacteria
2475
39.8 %
(986)
53.1 % 
(1315)
26.5 % 
(656)
53.9 %
29 aa 
1706 aa 





Nostoc sp. PCC 7120 (anab0)
Bacteria
6132
33.3 %
(2041)
45.7 % 
(2802)
25.6 % 
(1567)
41.3 %
17 aa 
4936 aa 





Prochlorococcus marinus MED4 (pmar0)
Bacteria
1712
42.5 %
(728)
55.1 % 
(944)
25.9 % 
(444)
30.8 %
32 aa 
1521 aa 





Prochlorococcus marinus MIT9313 (pmar1)
Bacteria
2265
37.3 %
(845)
49.9 % 
(1130)
24.6 % 
(558)
50.7 %
33 aa 
1765 aa 





Prochlorococcus marinus marinus CCMP1375 (pmar2)
Bacteria
1882
39.2 %
(738)
50.4 % 
(949)
25.4 % 
(478)
36.4 %
30 aa 
1524 aa 





Deinococcus radiodurans R1 (drad0)
Bacteria
3102
37.0 %
(1148)
51.4 % 
(1593)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Thermus thermophilus HB27 (tthe0)
Bacteria
2210
43.1 %
(952)
57.3 % 
(1266)
23.5 % 
(519)
69.4 %
27 aa 
2672 aa 





Bacillus halodurans C-125 (bhal0)
Bacteria
4066
40.8 %
(1658)
53.1 % 
(2160)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus anthracis str. Ames (bant0)
Bacteria
5311
35.4 %
(1882)
47.3 % 
(2510)
31.4 % 
(1666)
35.4 %
28 aa 
5017 aa 





Bacillus cereus ATCC 14579 (bcer0)
Bacteria
5255
36.9 %
(1939)
49.0 % 
(2577)
30.2 % 
(1586)
35.3 %
18 aa 
5017 aa 





Bacillus cereus ATCC 10987 (bcer1)
Bacteria
5844
40.3 %
(2353)
50.2 % 
(2936)
31.3 % 
(1829)
35.5 %
30 aa 
3242 aa 





Bacillus subtilis 168 (bsub0)
Bacteria
4106
41.4 %
(1701)
53.5 % 
(2196)
29.3 % 
(1202)
43.5 %
20 aa 
5488 aa 





Oceanobacillus iheyensis HTE831 (oihe0)
Bacteria
3496
42.5 %
(1486)
54.7 % 
(1912)
32.2 % 
(1127)
35.7 %
24 aa 
2373 aa 





Listeria innocua Clip11262 (linn0)
Bacteria
3043
42.0 %
(1277)
54.7 % 
(1664)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
45.2 %
(1287)
58.8 % 
(1674)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Staphylococcus aureus Mu50 (saur0)
Bacteria
2748
42.0 %
(1155)
53.5 % 
(1471)
27.6 % 
(758)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus N315 (saur1)
Bacteria
2624
44.2 %
(1161)
55.8 % 
(1465)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus MW2 (saur2)
Bacteria
2659
42.5 %
(1130)
53.7 % 
(1428)
28.4 % 
(756)
32.8 %
18 aa 
9904 aa 





Staphylococcus epidermidis ATCC 12228 (sepi0)
Bacteria
2485
41.3 %
(1026)
53.2 % 
(1321)
26.8 % 
(666)
32.0 %
25 aa 
9439 aa 





Clostridium acetobutylicum ATCC824 (cace0)
Bacteria
3848
40.6 %
(1561)
54.2 % 
(2084)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium perfringens 13 (cper0)
Bacteria
2723
42.9 %
(1167)
54.8 % 
(1492)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Clostridium tetani E88 (ctet0)
Bacteria
2432
42.5 %
(1034)
54.5 % 
(1326)
30.3 % 
(738)
28.6 %
71 aa 
2838 aa 





Thermoanaerobacter tengcongensis MB4T (tten0)
Bacteria
2588
43.1 %
(1116)
55.0 % 
(1424)
27.6 % 
(715)
37.6 %
37 aa 
2862 aa 





Enterococcus faecalis V583 (efae0)
Bacteria
3265
36.2 %
(1181)
48.6 % 
(1586)
27.7 % 
(906)
37.4 %
22 aa 
3173 aa 





Lactobacillus johnsonii NCC 533 (ljoh0)
Bacteria
1821
50.4 %
(918)
60.9 % 
(1109)
29.0 % 
(529)
34.6 %
38 aa 
4734 aa 





Lactobacillus plantarum WCFS1 (lpla0)
Bacteria
3009
41.4 %
(1245)
55.3 % 
(1663)
27.9 % 
(840)
44.5 %
24 aa 
5289 aa 





Lactococcus lactis IL1403 (llac0)
Bacteria
2266
41.7 %
(945)
55.8 % 
(1264)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus agalactiae (saga0)
Bacteria
2124
41.9 %
(891)
55.1 % 
(1170)
26.8 % 
(570)
35.6 %
23 aa 
2274 aa 





Streptococcus agalactiae NEM316 (saga1)
Bacteria
2094
43.4 %
(909)
56.7 % 
(1188)
28.8 % 
(603)
35.6 %
30 aa 
2066 aa 





Streptococcus mutans UA159 (smut0)
Bacteria
1960
44.1 %
(864)
58.5 % 
(1146)
27.3 % 
(535)
36.8 %
25 aa 
2724 aa 





Streptococcus pneumoniae R6 (spne0)
Bacteria
2094
41.5 %
(868)
53.1 % 
(1112)
25.4 % 
(531)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae TIGR4 (spne1)
Bacteria
2043
43.4 %
(887)
56.0 % 
(1145)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes SF370 (spyo0)
Bacteria
1696
43.2 %
(732)
56.8 % 
(964)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
41.4 %
(764)
54.6 % 
(1007)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Streptococcus pyogenes MGAS315 (spyo2)
Bacteria
1865
40.4 %
(754)
53.5 % 
(998)
23.0 % 
(429)
38.6 %
38 aa 
1622 aa 





Streptococcus pyogenes SSI-1 (spyo3)
Bacteria
1861
39.9 %
(742)
53.0 % 
(986)
22.9 % 
(426)
38.6 %
27 aa 
1623 aa 





Phytoplasma asteris, OY strain (past0)
Bacteria
754
45.0 %
(339)
57.0 % 
(430)
28.2 % 
(213)
27.7 %
33 aa 
1571 aa 





Mycoplasma gallisepticum R (mgal0)
Bacteria
726
41.7 %
(303)
52.5 % 
(381)
25.1 % 
(182)
31.5 %
37 aa 
1976 aa 





Mycoplasma genitalium G37 (mgen0)
Bacteria
480
50.0 %
(240)
64.6 % 
(310)
23.1 % 
(111)
31.7 %
37 aa 
1805 aa 





Mycoplasma penetrans (mpen0)
Bacteria
1037
36.4 %
(377)
46.8 % 
(485)
27.9 % 
(289)
25.7 %
47 aa 
3317 aa 





Mycoplasma pneumoniae M129 (mpne0)
Bacteria
688
38.1 %
(262)
49.0 % 
(337)
23.0 % 
(158)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis UAB CTIP (mpul0)
Bacteria
782
41.9 %
(328)
52.2 % 
(408)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Ureaplasma urealyticum (uure0)
Bacteria
611
40.3 %
(246)
50.2 % 
(307)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Fusobacterium nucleatum ATCC 25586 (fnuc0)
Bacteria
2067
38.9 %
(804)
50.2 % 
(1037)
25.8 % 
(534)
27.2 %
20 aa 
3165 aa 





Pirellula sp. 1 (rbal0)
Bacteria
7325
23.9 %
(1750)
35.8 % 
(2623)
23.0 % 
(1685)
55.4 %
35 aa 
8173 aa 





Caulobacter crescentus (ccre0)
Bacteria
3737
40.8 %
(1524)
56.2 % 
(2099)
22.9 % 
(854)
67.2 %
30 aa 
2479 aa 





Bradyrhizobium japonicum (bjap0)
Bacteria
8317
38.1 %
(3168)
53.8 % 
(4472)
24.7 % 
(2052)
64.1 %
30 aa 
5685 aa 





Rhodopseudomonas palustris (rpal0)
Bacteria
4814
41.9 %
(2018)
57.3 % 
(2759)
26.3 % 
(1264)
65.0 %
25 aa 
4335 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
42.2 %
(1348)
56.8 % 
(1815)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Brucella suis 1330 (bsui0)
Bacteria
3264
39.0 %
(1272)
51.9 % 
(1693)
23.5 % 
(767)
57.3 %
29 aa 
3420 aa 





Mesorhizobium loti MAFF303099 (mlot0)
Bacteria
7281
37.4 %
(2722)
53.0 % 
(3860)
22.7 % 
(1650)
62.5 %
30 aa 
3930 aa 





Agrobacterium tumefaciens C58 (atum0)
Bacteria
5301
41.5 %
(2200)
57.3 % 
(3039)
23.8 % 
(1263)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens C58 (Dupont) (atum1)
Bacteria
5402
41.1 %
(2220)
56.5 % 
(3053)
23.1 % 
(1246)
59.0 %
22 aa 
2831 aa 





Sinorhizobium meliloti 1021 (smel0)
Bacteria
6205
40.8 %
(2532)
56.8 % 
(3526)
23.8 % 
(1478)
62.2 %
31 aa 
2832 aa 





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
32.9 %
(452)
42.1 % 
(579)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia prowazekii Madrid E (rpro0)
Bacteria
834
48.7 %
(406)
60.7 % 
(506)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Bordetella bronchiseptica RB50 (bbro0)
Bacteria
4994
43.7 %
(2184)
58.9 % 
(2943)
22.9 % 
(1146)
68.1 %
31 aa 
4218 aa 





Bordetella parapertussis (bpar0)
Bacteria
4185
45.3 %
(1896)
60.6 % 
(2535)
23.3 % 
(975)
68.1 %
37 aa 
4218 aa 





Bordetella pertussis Tohama I (bper0)
Bacteria
3447
43.4 %
(1495)
63.4 % 
(2185)
22.2 % 
(766)
67.7 %
37 aa 
4196 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5116
38.2 %
(1955)
53.2 % 
(2720)
25.0 % 
(1279)
67.0 %
20 aa 
6889 aa 





Chromobacterium violaceum ATCC 12472 (cvio0)
Bacteria
4385
38.7 %
(1697)
53.8 % 
(2358)
25.0 % 
(1097)
64.8 %
51 aa 
4130 aa 





Neisseria meningitidis MC58 (nmen0)
Bacteria
2025
39.8 %
(805)
50.8 % 
(1028)
23.2 % 
(470)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
39.3 %
(811)
50.1 % 
(1034)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Nitrosomonas europaea ATCC 19718 (neur0)
Bacteria
2461
41.3 %
(1017)
56.2 % 
(1382)
25.8 % 
(636)
50.7 %
42 aa 
3064 aa 





Bdellovibrio bacteriovorus HD100 (bbac0)
Bacteria
3583
40.2 %
(1440)
52.5 % 
(1881)
29.3 % 
(1050)
50.6 %
30 aa 
2828 aa 





Geobacter sulfurreducens PCA (gsul0)
Bacteria
3445
42.1 %
(1452)
55.7 % 
(1918)
28.4 % 
(978)
60.9 %
30 aa 
5899 aa 





Campylobacter jejuni  (cjej0)
Bacteria
1634
43.4 %
(709)
55.8 % 
(912)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Helicobacter hepaticus ATCC 51449 (hhep0)
Bacteria
1875
37.5 %
(704)
49.1 % 
(920)
28.5 % 
(535)
35.9 %
30 aa 
2894 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
37.2 %
(582)
48.3 % 
(756)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
39.8 %
(594)
50.9 % 
(759)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Wolinella succinogenes DSMZ 1740 (wsuc0)
Bacteria
2044
44.8 %
(915)
59.7 % 
(1220)
28.5 % 
(583)
48.5 %
33 aa 
2883 aa 





Shewanella oneidensis MR-1 (sone0)
Bacteria
4778
33.8 %
(1613)
48.3 % 
(2310)
25.5 % 
(1220)
45.9 %
30 aa 
5020 aa 





Buchnera aphidicola Sg (baph0)
Bacteria
552
66.1 %
(365)
74.8 % 
(413)
17.0 % 
(94)
25.3 %
38 aa 
1413 aa 





Buchnera aphidicola (Baizongia pistaciae) (baph1)
Bacteria
507
66.9 %
(339)
76.1 % 
(386)
18.5 % 
(94)
25.3 %
38 aa 
1404 aa 





Buchnera sp. APS (buch0)
Bacteria
574
67.4 %
(387)
76.7 % 
(440)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli K-12 MG1655 (ecol0)
Bacteria
4285
44.0 %
(1884)
56.3 % 
(2414)
27.3 % 
(1169)
50.7 %
14 aa 
2358 aa 





Escherichia coli O157:H7  (ecol1)
Bacteria
5447
36.5 %
(1990)
48.2 % 
(2624)
24.0 % 
(1309)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 EDL933 (ecol2)
Bacteria
5449
36.5 %
(1990)
48.5 % 
(2644)
24.3 % 
(1323)
50.4 %
9 aa 
5188 aa 





Escherichia coli CFT073 (ecol3)
Bacteria
5379
37.2 %
(2002)
48.0 % 
(2583)
25.1 % 
(1351)
50.5 %
14 aa 
3216 aa 





Photorhabdus luminescens laumondii TTO1 (plum0)
Bacteria
4683
35.9 %
(1682)
49.2 % 
(2305)
20.9 % 
(981)
42.8 %
30 aa 
16367 aa 





Salmonella Typhi CT18 (styp0)
Bacteria
4767
38.5 %
(1835)
49.7 % 
(2369)
25.8 % 
(1230)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4554
42.1 %
(1918)
54.3 % 
(2472)
27.2 % 
(1239)
52.2 %
14 aa 
5559 aa 





Salmonella enterica subsp. enterica serovar Typhi Ty2 (styp2)
Bacteria
4323
41.1 %
(1775)
52.8 % 
(2281)
26.7 % 
(1153)
52.1 %
13 aa 
3624 aa 





Shigella flexneri 2a 301 (sfle0)
Bacteria
4452
37.8 %
(1684)
52.1 % 
(2319)
25.6 % 
(1139)
50.7 %
13 aa 
1522 aa 





Shigella flexneri 2a str. 2457T (sfle1)
Bacteria
4068
39.8 %
(1618)
53.3 % 
(2170)
25.6 % 
(1043)
50.9 %
14 aa 
1522 aa 





Wigglesworthia brevipalpis (wbre0)
Bacteria
611
63.7 %
(389)
73.0 % 
(446)
23.7 % 
(145)
22.5 %
38 aa 
1405 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4083
39.1 %
(1597)
52.4 % 
(2138)
25.8 % 
(1054)
47.6 %
14 aa 
3705 aa 





Yersinia pestis KIM (ypes1)
Bacteria
4281
37.7 %
(1613)
50.0 % 
(2141)
25.8 % 
(1105)
47.7 %
14 aa 
3710 aa 





Yersinia pestis biovar Mediaevails str. 91001 (ypes2)
Bacteria
4142
39.2 %
(1622)
51.5 % 
(2135)
26.4 % 
(1092)
47.7 %
20 aa 
3710 aa 





Candidatus Blochmannia floridanus (bflo0)
Bacteria
583
67.2 %
(392)
77.4 % 
(451)
23.0 % 
(134)
27.4 %
38 aa 
1420 aa 





Coxiella burnetii RSA 493 (cbur0)
Bacteria
2045
35.1 %
(717)
45.9 % 
(939)
23.4 % 
(479)
42.6 %
30 aa 
1734 aa 





Haemophilus ducreyi 35000HP (hduc0)
Bacteria
1717
41.1 %
(706)
50.8 % 
(873)
24.9 % 
(427)
38.2 %
30 aa 
4919 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
50.6 %
(864)
61.3 % 
(1048)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Pasteurella multocida PM70 (pmul0)
Bacteria
2014
49.3 %
(993)
62.0 % 
(1248)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Pseudomonas aeruginosa PAO1 (paer0)
Bacteria
5566
41.6 %
(2315)
58.0 % 
(3230)
26.8 % 
(1491)
66.6 %
10 aa 
5627 aa 





Pseudomonas putida KT2440 (pput0)
Bacteria
5350
40.7 %
(2176)
55.9 % 
(2988)
25.3 % 
(1356)
61.5 %
23 aa 
8682 aa 





Pseudomonas syringae pv. tomato str. DC3000 (psyr0)
Bacteria
5608
37.6 %
(2109)
52.7 % 
(2957)
23.8 % 
(1337)
58.3 %
24 aa 
6274 aa 





Vibrio cholerae N16961 (vcho0)
Bacteria
3828
39.1 %
(1496)
51.8 % 
(1981)
27.4 % 
(1049)
47.5 %
26 aa 
4558 aa 





Vibrio parahaemolyticus RIMD 2210633 (vpar0)
Bacteria
4832
38.6 %
(1863)
51.3 % 
(2481)
27.2 % 
(1316)
45.4 %
14 aa 
6084 aa 





Vibrio vulnificus CMCP6 (vvul0)
Bacteria
4537
40.1 %
(1819)
54.6 % 
(2476)
25.6 % 
(1161)
46.7 %
20 aa 
5206 aa 





Vibrio vulnificus YJ016 (vvul1)
Bacteria
5028
36.9 %
(1857)
50.0 % 
(2514)
26.7 % 
(1341)
46.7 %
34 aa 
5206 aa 





Xanthomonas axonopodis pv. citri 306 (xaxo0)
Bacteria
4427
38.9 %
(1722)
54.1 % 
(2395)
24.8 % 
(1100)
64.7 %
30 aa 
4753 aa 





Xanthomonas campestris pv. campestris ATCC 33913 (xcam0)
Bacteria
4181
39.9 %
(1668)
55.0 % 
(2301)
25.3 % 
(1056)
65.1 %
21 aa 
3961 aa 





Xylella fastidiosa 9a5c (xfas0)
Bacteria
2832
31.1 %
(882)
41.5 % 
(1176)
24.7 % 
(700)
52.6 %
30 aa 
3455 aa 





Xylella fastidiosa Temecula1 (xfas1)
Bacteria
2036
41.6 %
(846)
52.9 % 
(1078)
25.6 % 
(522)
51.8 %
30 aa 
3457 aa 





Leptospira interrogans serovar lai str. 56601 (lint0)
Bacteria
4725
25.1 %
(1184)
36.7 % 
(1736)
26.6 % 
(1255)
35.0 %
30 aa 
3141 aa 





Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 (lint1)
Bacteria
3660
32.0 %
(1173)
46.2 % 
(1690)
31.5 % 
(1152)
35.0 %
37 aa 
3140 aa 





Borrelia burgdorferi (bbur0)
Bacteria
1639
24.5 %
(401)
33.4 % 
(547)
28.0 % 
(459)
28.2 %
30 aa 
2166 aa 





Treponema pallidum (tpal0)
Bacteria
1031
39.8 %
(410)
50.6 % 
(522)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima (tmar0)
Bacteria
1846
46.4 %
(857)
57.8 % 
(1067)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Plasmodium falciparum 3D7 (pfal0)
Eukaryota
5268
27.1 %
(1428)
37.4 % 
(1971)
35.2 % 
(1853)
19.4 %
13 aa 
10589 aa 





Guillardia theta Nucleomorph (gthe0)
Eukaryota
632
42.1 %
(266)
49.8 % 
(315)
23.9 % 
(151)
26.4 %
29 aa 
2057 aa 





Leishmania major Friedlin (lmaj0)
Eukaryota
173
26.6 %
(46)
36.4 % 
(63)
25.4 % 
(44)
63.1 %
83 aa 
3112 aa 





Neurospora crassa (ncra0)
Eukaryota
10088
26.8 %
(2708)
38.2 % 
(3852)
20.4 % 
(2062)
56.0 %
9 aa 
10820 aa 





Saccharomyces cerevisiae (scer0)
Eukaryota
5869
37.8 %
(2220)
50.7 % 
(2976)
21.6 % 
(1266)
38.1 %
16 aa 
4910 aa 





Schizosaccharomyces pombe 972h- (spom0)
Eukaryota
5261
41.1 %
(2160)
54.0 % 
(2840)
20.8 % 
(1096)
34.6 %
14 aa 
4924 aa 





Drosophila melanogaster (dmel0)
Eukaryota
18302
42.5 %
(7783)
53.1 % 
(9725)
30.0 % 
(5488)
0.0 %
9 aa 
23054 aa 





Takifugu rubripes rubripes (trub0)
Eukaryota
37452
34.3 %
(12843)
41.8 % 
(15640)
16.6 % 
(6201)
0.0 %
4 aa 
5522 aa 





Danio rerio (drer0)
Eukaryota
26587
53.2 %
(14148)
63.6 % 
(16911)
24.1 % 
(6406)
37.1 %
22 aa 
5805 aa 





Homo sapiens (hsap0)
Eukaryota
28063
48.5 %
(13600)
57.3 % 
(16070)
26.3 % 
(7388)
40.8 %
19 aa 
17539 aa 





Homo sapiens cDNA (huge0)
Eukaryota
2037
46.2 %
(942)
62.2 % 
(1268)
21.9 % 
(447)
-
73 aa 
4594 aa 





Mus musculus (mmus0)
Eukaryota
24928
50.3 %
(12538)
60.1 % 
(14984)
26.6 % 
(6620)
41.8 %
22 aa 
5928 aa 





Rattus norvegicus (rnor0)
Eukaryota
28682
52.0 %
(14907)
61.4 % 
(17605)
28.0 % 
(8019)
41.9 %
16 aa 
7340 aa 





Ciona intestinalis (cint0)
Eukaryota
15865
41.9 %
(6643)
52.1 % 
(8258)
24.6 % 
(3901)
0.0 %
2 aa 
17232 aa 





Caenorhabditis briggsae (cbri0)
Eukaryota
14713
39.2 %
(5771)
49.4 % 
(7263)
36.2 % 
(5329)
37.4 %
22 aa 
7747 aa 





Caenorhabditis elegans (cele0)
Eukaryota
22220
31.6 %
(7015)
41.0 % 
(9114)
36.8 % 
(8176)
0.0 %
6 aa 
13100 aa 





Encephalitozoon cuniculi (ecun0)
Eukaryota
1996
34.5 %
(688)
45.5 % 
(909)
20.6 % 
(412)
47.3 %
52 aa 
3436 aa 





Oryza sativa (japonica cultivar-group) (osat0)
Eukaryota
16724
19.6 %
(3285)
27.2 % 
(4548)
22.1 % 
(3699)
43.6 %
13 aa 
2876 aa 





Oryza sativa cDNA(japonica cultivar-group) (osat1)
Eukaryota
32071
36.1 %
(11580)
46.5 % 
(14927)
26.4 % 
(8470)
-
1 aa 
1921 aa 





Arabidopsis thaliana (atha0)
Eukaryota
28723
37.3 %
(10709)
50.7 % 
(14552)
26.7 % 
(7655)
36.03 %
19 aa 
5155 aa 





186 (bp180)
Viruses
46
17.4 %
(8)
17.4 % 
(8)
13.0 % 
(6)
53.1 %
58 aa 
812 aa 





44RR2.8t (bp441)
Viruses
252
15.5 %
(39)
21.8 % 
(55)
6.7 % 
(17)
43.9 %
32 aa 
1420 aa 





A511 (bpa50)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
36.7 %
106 aa 
562 aa 





Aeh1 (bpae0)
Viruses
331
10.3 %
(34)
15.1 % 
(50)
11.2 % 
(37)
42.8 %
28 aa 
1358 aa 





Bcep781 (bpbc0)
Viruses
61
8.2 %
(5)
9.8 % 
(6)
4.9 % 
(3)
63.3 %
38 aa 
873 aa 





Bcep1 (bpbc1)
Viruses
71
5.6 %
(4)
8.5 % 
(6)
9.9 % 
(7)
63.6 %
41 aa 
824 aa 





Bcep43 (bpbc3)
Viruses
66
7.6 %
(5)
9.1 % 
(6)
7.6 % 
(5)
63.4 %
47 aa 
824 aa 





ƒÓCTX (bpct0)
Viruses
47
2.1 %
(1)
8.5 % 
(4)
12.8 % 
(6)
62.6 %
35 aa 
904 aa 





EJ-1 (bpej0)
Viruses
73
4.1 %
(3)
11.0 % 
(8)
19.2 % 
(14)
39.6 %
34 aa 
748 aa 





ƒÓg1e (bpg10)
Viruses
50
0.0 %
(0)
12.0 % 
(6)
12.0 % 
(6)
42.7 %
49 aa 
1662 aa 





HF2 (bphf0)
Viruses
114
6.1 %
(7)
10.5 % 
(12)
6.1 % 
(7)
55.8 %
29 aa 
1288 aa 





HP1 (bphp0)
Viruses
41
7.3 %
(3)
12.2 % 
(5)
12.2 % 
(5)
40.0 %
61 aa 
925 aa 





HP2 (bphp1)
Viruses
36
5.6 %
(2)
11.1 % 
(4)
13.9 % 
(5)
39.9 %
61 aa 
910 aa 





K139 (bpk10)
Viruses
44
2.3 %
(1)
9.1 % 
(4)
6.8 % 
(3)
48.9 %
53 aa 
800 aa 





KVP40 (bpkv0)
Viruses
381
9.7 %
(37)
15.2 % 
(58)
11.3 % 
(43)
42.6 %
36 aa 
1256 aa 





L-413C (bpl40)
Viruses
40
5.0 %
(2)
10.0 % 
(4)
17.5 % 
(7)
52.1 %
56 aa 
913 aa 





Mu (bpmu0)
Viruses
53
9.4 %
(5)
11.3 % 
(6)
11.3 % 
(6)
52.1 %
39 aa 
690 aa 





P2 (bpp20)
Viruses
42
4.8 %
(2)
11.9 % 
(5)
14.3 % 
(6)
50.2 %
56 aa 
815 aa 





P4 (bpp40)
Viruses
12
8.3 %
(1)
16.7 % 
(2)
0.0 % 
(0)
49.5 %
88 aa 
777 aa 





PA01 (bppa0)
Viruses
34
11.8 %
(4)
14.7 % 
(5)
8.8 % 
(3)
0.0 %
23 aa 
745 aa 





ƒÓKZ (bpph0)
Viruses
306
3.9 %
(12)
9.2 % 
(28)
11.8 % 
(36)
36.8 %
63 aa 
2237 aa 





ƒÓCh1 (bpph1)
Viruses
98
6.1 %
(6)
9.2 % 
(9)
5.1 % 
(5)
61.9 %
54 aa 
581 aa 





RB69 (bprb0)
Viruses
256
15.2 %
(39)
22.3 % 
(57)
9.4 % 
(24)
0.0 %
19 aa 
1277 aa 





RB49 (bprb1)
Viruses
272
12.9 %
(35)
19.1 % 
(52)
11.0 % 
(30)
0.0 %
32 aa 
1246 aa 





Rd (bprd0)
Viruses
47
8.5 %
(4)
14.9 % 
(7)
8.5 % 
(4)
0.0 %
38 aa 
731 aa 





RM378 (bprm0)
Viruses
146
4.8 %
(7)
11.6 % 
(17)
9.6 % 
(14)
42.5 %
27 aa 
1019 aa 





T4 (bpt40)
Viruses
278
15.8 %
(44)
20.9 % 
(58)
10.4 % 
(29)
35.3 %
26 aa 
1289 aa 





VHML (bpvh0)
Viruses
57
8.8 %
(5)
14.0 % 
(8)
7.0 % 
(4)
50.6 %
33 aa 
1023 aa 





WƒÓ (bpwp0)
Viruses
44
6.8 %
(3)
9.1 % 
(4)
11.4 % 
(5)
51.7 %
56 aa 
815 aa 





44AHJD (bp440)
Viruses
21
0.0 %
(0)
4.8 % 
(1)
9.5 % 
(2)
29.6 %
55 aa 
755 aa 





APSE-1 (bpap0)
Viruses
54
9.3 %
(5)
11.1 % 
(6)
18.5 % 
(10)
43.9 %
73 aa 
993 aa 





B103 (bpb11)
Viruses
17
29.4 %
(5)
35.3 % 
(6)
5.9 % 
(1)
37.7 %
100 aa 
860 aa 





Bcep22 (bpbc2)
Viruses
78
5.1 %
(4)
12.8 % 
(10)
9.0 % 
(7)
65.3 %
32 aa 
4602 aa 





BPP-1 (bpbp0)
Viruses
49
10.2 %
(5)
16.3 % 
(8)
10.2 % 
(5)
65.4 %
56 aa 
2052 aa 





Cp-1 (bpcp0)
Viruses
28
7.1 %
(2)
7.1 % 
(2)
14.3 % 
(4)
38.9 %
62 aa 
586 aa 





rb15 (bpep0)
Viruses
49
4.1 %
(2)
12.2 % 
(6)
18.4 % 
(9)
50.8 %
35 aa 
1070 aa 





GA-1 (bpga0)
Viruses
35
14.3 %
(5)
20.0 % 
(7)
22.9 % 
(8)
34.7 %
25 aa 
740 aa 





gh-1 (bpgh0)
Viruses
42
19.0 %
(8)
28.6 % 
(12)
7.1 % 
(3)
57.4 %
25 aa 
1392 aa 





H-19B (bph10)
Viruses
22
9.1 %
(2)
18.2 % 
(4)
13.6 % 
(3)
45.9 %
44 aa 
315 aa 





P1 (bpp10)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





P1 (bpp11)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





P22 (bpp21)
Viruses
36
16.7 %
(6)
22.2 % 
(8)
5.6 % 
(2)
47.1 %
47 aa 
667 aa 





P60 (bpp60)
Viruses
80
11.2 %
(9)
16.2 % 
(13)
6.2 % 
(5)
53.2 %
40 aa 
680 aa 





PaP3 (bppa1)
Viruses
69
7.2 %
(5)
11.6 % 
(8)
11.6 % 
(8)
52.1 %
26 aa 
1056 aa 





ƒÓYeO3-12 (bpph2)
Viruses
59
18.6 %
(11)
22.0 % 
(13)
15.3 % 
(9)
50.6 %
25 aa 
1320 aa 





ƒÓA1122 (bpphD)
Viruses
50
16.0 %
(8)
20.0 % 
(10)
10.0 % 
(5)
48.3 %
27 aa 
1318 aa 





P68 (bpphE)
Viruses
22
4.5 %
(1)
9.1 % 
(2)
9.1 % 
(2)
29.3 %
55 aa 
755 aa 





ƒÓKMV (bpphF)
Viruses
48
10.4 %
(5)
22.9 % 
(11)
12.5 % 
(6)
62.3 %
64 aa 
1337 aa 





PZA (bppz0)
Viruses
27
14.8 %
(4)
18.5 % 
(5)
11.1 % 
(3)
39.7 %
37 aa 
854 aa 





V (bpsf1)
Viruses
53
9.4 %
(5)
13.2 % 
(7)
13.2 % 
(7)
50.8 %
56 aa 
611 aa 





Sf6 (bpsf2)
Viruses
66
12.1 %
(8)
13.6 % 
(9)
12.1 % 
(8)
47.5 %
27 aa 
708 aa 





SIO1 (bpsi0)
Viruses
34
0.0 %
(0)
0.0 % 
(0)
11.8 % 
(4)
46.2 %
77 aa 
1484 aa 





SP6 (bpsp0)
Viruses
20
20.0 %
(4)
30.0 % 
(6)
5.0 % 
(1)
46.1 %
42 aa 
874 aa 





ST64B (bpst0)
Viruses
56
10.7 %
(6)
16.1 % 
(9)
8.9 % 
(5)
51.0 %
54 aa 
642 aa 





ST64T (bpst1)
Viruses
65
9.2 %
(6)
12.3 % 
(8)
10.8 % 
(7)
47.5 %
37 aa 
725 aa 





T3 (bpt30)
Viruses
44
18.2 %
(8)
22.7 % 
(10)
15.9 % 
(7)
49.9 %
25 aa 
884 aa 





T7 (bpt70)
Viruses
58
15.5 %
(9)
17.2 % 
(10)
12.1 % 
(7)
48.4 %
29 aa 
1318 aa 





VpV262 (bpvp0)
Viruses
67
1.5 %
(1)
6.0 % 
(4)
9.0 % 
(6)
49.5 %
46 aa 
1536 aa 





77 (bp770)
Viruses
69
5.8 %
(4)
11.6 % 
(8)
10.1 % 
(7)
33.5 %
33 aa 
1509 aa 





933W (bp930)
Viruses
80
6.2 %
(5)
11.2 % 
(9)
12.5 % 
(10)
49.4 %
51 aa 
2806 aa 





A118 (bpa10)
Viruses
72
2.8 %
(2)
12.5 % 
(9)
13.9 % 
(10)
36.1 %
21 aa 
1794 aa 





B1 (bpb10)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
36.8 %
65 aa 
273 aa 





BF23 (bpbf0)
Viruses
8
12.5 %
(1)
12.5 % 
(1)
12.5 % 
(1)
38.5 %
75 aa 
595 aa 





bIL170 (bpbi0)
Viruses
64
1.6 %
(1)
4.7 % 
(3)
10.9 % 
(7)
34.3 %
33 aa 
916 aa 





bIL285 (bpbi1)
Viruses
62
4.8 %
(3)
8.1 % 
(5)
9.7 % 
(6)
35.2 %
42 aa 
894 aa 





bIL286 (bpbi2)
Viruses
61
6.6 %
(4)
13.1 % 
(8)
13.1 % 
(8)
35.3 %
32 aa 
1640 aa 





bIL309 (bpbi3)
Viruses
56
5.4 %
(3)
10.7 % 
(6)
14.3 % 
(8)
35.7 %
40 aa 
1441 aa 





bIL310 (bpbi4)
Viruses
29
0.0 %
(0)
13.8 % 
(4)
10.3 % 
(3)
35.9 %
28 aa 
542 aa 





bIL311 (bpbi5)
Viruses
22
13.6 %
(3)
27.3 % 
(6)
9.1 % 
(2)
34.2 %
38 aa 
489 aa 





bIL312 (bpbi6)
Viruses
27
3.7 %
(1)
11.1 % 
(3)
11.1 % 
(3)
33.0 %
46 aa 
480 aa 





BK5-T (bpbk0)
Viruses
63
4.8 %
(3)
9.5 % 
(6)
15.9 % 
(10)
35.0 %
42 aa 
1904 aa 





Bxb1 (bpbx0)
Viruses
86
7.0 %
(6)
14.0 % 
(12)
12.8 % 
(11)
63.6 %
31 aa 
823 aa 





c2 (bpc20)
Viruses
39
0.0 %
(0)
5.1 % 
(2)
15.4 % 
(6)
36.3 %
22 aa 
706 aa 





D29 (bpd20)
Viruses
79
8.9 %
(7)
19.0 % 
(15)
10.1 % 
(8)
63.5 %
28 aa 
837 aa 





D3 (bpd30)
Viruses
94
7.4 %
(7)
11.7 % 
(11)
12.8 % 
(12)
57.8 %
32 aa 
909 aa 





D3112 (bpd31)
Viruses
55
5.5 %
(3)
9.1 % 
(5)
10.9 % 
(6)
64.3 %
34 aa 
735 aa 





HK022 (bphk0)
Viruses
57
12.3 %
(7)
15.8 % 
(9)
10.5 % 
(6)
49.5 %
50 aa 
1183 aa 





HK620 (bphk1)
Viruses
58
8.6 %
(5)
10.3 % 
(6)
8.6 % 
(5)
46.7 %
27 aa 
722 aa 





HK97 (bphk2)
Viruses
61
13.1 %
(8)
18.0 % 
(11)
11.5 % 
(7)
49.8 %
32 aa 
1296 aa 





2389 (bpl20)
Viruses
57
7.0 %
(4)
12.3 % 
(7)
12.3 % 
(7)
34.7 %
48 aa 
1026 aa 





L5 (bpl50)
Viruses
85
8.2 %
(7)
14.1 % 
(12)
7.1 % 
(6)
62.3 %
37 aa 
837 aa 





ă (bpla0)
Viruses
66
18.2 %
(12)
27.3 % 
(18)
10.6 % 
(7)
49.9 %
28 aa 
1132 aa 





A2 (bplc0)
Viruses
61
4.9 %
(3)
13.1 % 
(8)
8.2 % 
(5)
44.9 %
59 aa 
1621 aa 





Lj928 (bplj0)
Viruses
50
4.0 %
(2)
12.0 % 
(6)
12.0 % 
(6)
34.7 %
48 aa 
1544 aa 





Lj965 (bplj1)
Viruses
46
4.3 %
(2)
15.2 % 
(7)
13.0 % 
(6)
35.1 %
49 aa 
2021 aa 





N15 (bpn10)
Viruses
60
10.0 %
(6)
21.7 % 
(13)
6.7 % 
(4)
51.2 %
18 aa 
1324 aa 





P27 (bpp22)
Viruses
58
10.3 %
(6)
15.5 % 
(9)
12.1 % 
(7)
49.4 %
51 aa 
649 aa 





P335 (bpp30)
Viruses
49
8.2 %
(4)
14.3 % 
(7)
10.2 % 
(5)
35.4 %
54 aa 
1711 aa 





PG1 (bppg0)
Viruses
100
3.0 %
(3)
10.0 % 
(10)
10.0 % 
(10)
66.5 %
45 aa 
1932 aa 





ƒÓ105 (bpph3)
Viruses
51
5.9 %
(3)
15.7 % 
(8)
11.8 % 
(6)
42.7 %
56 aa 
1018 aa 





ƒÓC31 (bpph4)
Viruses
55
5.5 %
(3)
14.5 % 
(8)
14.5 % 
(8)
63.6 %
41 aa 
729 aa 





ƒÓ3626 (bpph5)
Viruses
50
14.0 %
(7)
22.0 % 
(11)
14.0 % 
(7)
28.4 %
39 aa 
983 aa 





ƒÓE125 (bpph6)
Viruses
71
2.8 %
(2)
16.9 % 
(12)
11.3 % 
(8)
61.2 %
43 aa 
1354 aa 





ƒÓETA (bpph7)
Viruses
66
6.1 %
(4)
13.6 % 
(9)
13.6 % 
(9)
35.4 %
48 aa 
989 aa 





ƒÓNIH1.1 (bpph8)
Viruses
55
5.5 %
(3)
12.7 % 
(7)
12.7 % 
(7)
38.6 %
49 aa 
1086 aa 





ƒÓPV83 (bpph9)
Viruses
65
7.7 %
(5)
13.8 % 
(9)
13.8 % 
(9)
33.5 %
46 aa 
1313 aa 





ƒÓSLT (bpphA)
Viruses
62
11.3 %
(7)
19.4 % 
(12)
14.5 % 
(9)
33.3 %
35 aa 
1374 aa 





ƒÓadh (bpphB)
Viruses
63
9.5 %
(6)
14.3 % 
(9)
12.7 % 
(8)
35.6 %
49 aa 
1487 aa 





ƒÓBT1 (bpphC)
Viruses
55
3.6 %
(2)
16.4 % 
(9)
16.4 % 
(9)
62.8 %
46 aa 
808 aa 





ƒÓ11 (bpphH)
Viruses
53
3.8 %
(2)
17.0 % 
(9)
9.4 % 
(5)
34.5 %
57 aa 
910 aa 





ƒÓ12 (bpphI)
Viruses
49
12.2 %
(6)
20.4 % 
(10)
4.1 % 
(2)
33.3 %
54 aa 
2066 aa 





ƒÓ13 (bpphJ)
Viruses
49
4.1 %
(2)
12.2 % 
(6)
18.4 % 
(9)
33.5 %
52 aa 
1550 aa 





ƒÕM2 (bpps0)
Viruses
31
0.0 %
(0)
3.2 % 
(1)
6.5 % 
(2)
46.3 %
90 aa 
1186 aa 





ƒÕM100 (bpps1)
Viruses
37
5.4 %
(2)
10.8 % 
(4)
10.8 % 
(4)
45.7 %
85 aa 
1157 aa 





PY54 (bppy0)
Viruses
67
4.5 %
(3)
14.9 % 
(10)
9.0 % 
(6)
44.6 %
54 aa 
1330 aa 





r1t (bpr10)
Viruses
50
6.0 %
(3)
14.0 % 
(7)
14.0 % 
(7)
35.5 %
54 aa 
667 aa 





PVL (bpsa0)
Viruses
62
6.5 %
(4)
12.9 % 
(8)
17.7 % 
(11)
33.6 %
43 aa 
759 aa 





Sfi11 (bpsf0)
Viruses
25
0.0 %
(0)
4.0 % 
(1)
12.0 % 
(3)
38.6 %
53 aa 
1510 aa 





sk1 (bpsk0)
Viruses
54
3.7 %
(2)
5.6 % 
(3)
11.1 % 
(6)
34.5 %
39 aa 
999 aa 





SPƒÀc2 (bpsp1)
Viruses
185
9.2 %
(17)
17.8 % 
(33)
15.1 % 
(28)
34.6 %
21 aa 
2285 aa 





SPP1 (bpsp2)
Viruses
106
3.8 %
(4)
7.5 % 
(8)
23.6 % 
(25)
43.7 %
51 aa 
846 aa 





MM1 (bpsp3)
Viruses
53
11.3 %
(6)
15.1 % 
(8)
11.3 % 
(6)
38.4 %
57 aa 
1989 aa 





7201 (bpst2)
Viruses
46
8.7 %
(4)
17.4 % 
(8)
10.9 % 
(5)
38.7 %
47 aa 
1554 aa 





DT1 (bpst3)
Viruses
47
4.3 %
(2)
14.9 % 
(7)
4.3 % 
(2)
39.1 %
36 aa 
1278 aa 





O1205 (bpst4)
Viruses
57
3.5 %
(2)
7.0 % 
(4)
8.8 % 
(5)
38.3 %
42 aa 
1517 aa 





Sfi19 (bpst5)
Viruses
45
4.4 %
(2)
15.6 % 
(7)
8.9 % 
(4)
38.3 %
40 aa 
1626 aa 





Sfi21 (bpst6)
Viruses
50
4.0 %
(2)
18.0 % 
(9)
12.0 % 
(6)
37.6 %
48 aa 
1560 aa 





Stx2 (bpst7)
Viruses
165
3.0 %
(5)
6.7 % 
(11)
17.6 % 
(29)
49.4 %
33 aa 
2806 aa 





TM4 (bptm0)
Viruses
89
2.2 %
(2)
5.6 % 
(5)
12.4 % 
(11)
68.1 %
29 aa 
1229 aa 





TP901-1 (bptp0)
Viruses
56
7.1 %
(4)
12.5 % 
(7)
7.1 % 
(4)
35.4 %
47 aa 
937 aa 





Tuc2009 (bptu0)
Viruses
56
8.9 %
(5)
12.5 % 
(7)
8.9 % 
(5)
36.2 %
32 aa 
1025 aa 





ul36 (bpul0)
Viruses
58
5.2 %
(3)
8.6 % 
(5)
13.8 % 
(8)
35.8 %
50 aa 
908 aa 





VT2-Sa (bpvt0)
Viruses
82
7.3 %
(6)
12.2 % 
(10)
13.4 % 
(11)
49.9 %
42 aa 
2806 aa 





VWB (bpvw0)
Viruses
61
1.6 %
(1)
9.8 % 
(6)
9.8 % 
(6)
71.1 %
51 aa 
1440 aa 





ƒÓ1026b (bpphG)
Viruses
83
3.6 %
(3)
13.3 % 
(11)
12.0 % 
(10)
60.7 %
35 aa 
1354 aa 





PM2 (bppm0)
Viruses
22
4.5 %
(1)
9.1 % 
(2)
31.8 % 
(7)
42.2 %
30 aa 
634 aa 





PRD1 (bppr0)
Viruses
22
13.6 %
(3)
18.2 % 
(4)
36.4 % 
(8)
48.1 %
42 aa 
591 aa 






DATE February 9 2004

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf 






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.





Aeropyrum pernix K1 (aper0)
Archaea
2694
21.0 %
(567)
29.6 % 
(797)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Sulfolobus solfataricus P2 (ssol0)
Archaea
2994
32.4 %
(971)
46.5 % 
(1393)
23.8 % 
(712)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii 7 (stok0)
Archaea
2826
32.1 %
(906)
44.7 % 
(1264)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum IM2 (paer1)
Archaea
2605
27.6 %
(720)
40.9 % 
(1065)
25.9 % 
(674)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus DSM4304 (aful0)
Archaea
2407
37.6 %
(904)
51.8 % 
(1248)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Methanosarcina acetivorans C2A (mace0)
Archaea
4544
31.9 %
(1450)
47.4 % 
(2154)
27.7 % 
(1260)
42.7 %
41 aa 
4226 aa 





Methanosarcina mazei Goe1 (mmaz0)
Archaea
3371
33.1 %
(1117)
48.9 % 
(1648)
24.1 % 
(812)
41.5 %
16 aa 
1898 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
32.1 %
(837)
46.3 % 
(1205)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Methanobacterium thermoautotrophicum Delta H (mthe0)
Archaea
1869
39.4 %
(737)
53.7 % 
(1004)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanococcus jannaschii DSM2661 (mjan0)
Archaea
1770
35.9 %
(635)
49.8 % 
(881)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
33.4 %
(564)
47.1 % 
(795)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Pyrococcus abyssi Orsay (paby0)
Archaea
1784
40.8 %
(728)
53.6 % 
(957)
24.7 % 
(441)
44.7 %
18 aa 
2122 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
37.8 %
(781)
50.7 % 
(1047)
24.8 % 
(513)
40.8 %
21 aa 
1740 aa 





Pyrococcus horikoshii OT3 (phor0)
Archaea
2061
33.1 %
(683)
43.2 % 
(891)
28.0 % 
(578)
41.9 %
50 aa 
4436 aa 





Thermoplasma acidophilum DSM1728 (taci0)
Archaea
1478
42.7 %
(631)
57.7 % 
(853)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium GSS1 (tvol0)
Archaea
1526
42.3 %
(646)
55.8 % 
(852)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Nanoarchaeum equitans Kin4-M (nequ0)
Archaea
536
36.0 %
(193)
50.6 % 
(271)
25.7 % 
(138)
31.6 %
54 aa 
2197 aa 





Corynebacterium diphtheriae NCTC13129 (cdip0)
Bacteria
2272
40.4 %
(919)
52.2 % 
(1187)
26.2 % 
(596)
53.5 %
31 aa 
2977 aa 





Corynebacterium efficiens YS-314 (ceff0)
Bacteria
2998
36.5 %
(1095)
51.1 % 
(1533)
25.2 % 
(754)
63.0 %
33 aa 
3022 aa 





Corynebacterium glutamicum ATCC 13032 (cglu0)
Bacteria
3099
37.3 %
(1155)
51.1 % 
(1584)
25.6 % 
(793)
53.8 %
33 aa 
2993 aa 





Mycobacterium leprae TN (mlep0)
Bacteria
1605
45.0 %
(722)
57.8 % 
(927)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium tuberculosis H37Rv (mtub0)
Bacteria
3918
36.8 %
(1442)
52.2 % 
(2046)
22.0 % 
(861)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
34.0 %
(1425)
47.8 % 
(2003)
21.3 % 
(890)
65.6 %
30 aa 
4151 aa 





Mycobacterium bovis subsp. bovis AF2122/97 (mbov0)
Bacteria
3920
36.9 %
(1447)
51.8 % 
(2029)
22.0 % 
(861)
65.6 %
26 aa 
4151 aa 





Streptomyces avermitilis (save0)
Bacteria
7671
34.9 %
(2678)
52.5 % 
(4025)
22.9 % 
(1757)
70.7 %
33 aa 
7746 aa 





Streptomyces coelicolor A3(2) (scoe0)
Bacteria
8154
33.9 %
(2765)
51.8 % 
(4224)
22.6 % 
(1843)
72.0 %
19 aa 
7463 aa 





Bifidobacterium longum NCC2705 (blon0)
Bacteria
1731
45.3 %
(785)
57.4 % 
(993)
25.0 % 
(432)
60.1 %
15 aa 
3172 aa 





Tropheryma whipplei TW08/27 (twhi0)
Bacteria
783
52.9 %
(414)
64.0 % 
(501)
30.5 % 
(239)
46.3 %
29 aa 
2308 aa 





Tropheryma whipplei str. Twist (twhi1)
Bacteria
808
51.4 %
(415)
62.5 % 
(505)
32.1 % 
(259)
46.3 %
39 aa 
2312 aa 





Aquifex aeolicus VF5 (aaeo0)
Bacteria
1553
48.2 %
(748)
60.5 % 
(940)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Bacteroides thetaiotaomicron VPI-5482 (bthe0)
Bacteria
4816
33.1 %
(1592)
51.5 % 
(2479)
32.4 % 
(1561)
42.8 %
32 aa 
2183 aa 





Porphyromonas gingivalis W83 (pgin0)
Bacteria
1909
36.6 %
(698)
50.1 % 
(956)
27.0 % 
(516)
48.3 %
30 aa 
2316 aa 





Chlamydia muridarum Nigg (cmur0)
Bacteria
911
42.9 %
(391)
53.3 % 
(486)
27.1 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis D/UW-3/CX (ctra0)
Bacteria
894
43.7 %
(391)
54.7 % 
(489)
27.2 % 
(243)
41.3 %
45 aa 
1786 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1116
35.3 %
(394)
44.3 % 
(494)
31.4 % 
(350)
40.6 %
30 aa 
1826 aa 





Chlamydophila caviae GPIC (ccav0)
Bacteria
1005
40.5 %
(407)
50.5 % 
(508)
30.5 % 
(307)
39.2 %
30 aa 
3346 aa 





Chlamydophila pneumoniae CWL029 (cpne1)
Bacteria
1052
37.6 %
(396)
47.1 % 
(495)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
37.2 %
(398)
46.9 % 
(501)
31.2 % 
(333)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae TW-183 (cpne3)
Bacteria
1113
35.9 %
(400)
45.0 % 
(501)
30.6 % 
(341)
40.6 %
33 aa 
1826 aa 





Chlorobium tepidum TLS (ctep0)
Bacteria
2252
39.8 %
(897)
52.3 % 
(1177)
21.4 % 
(483)
56.5 %
30 aa 
1510 aa 





Gloeobacter violaceus PCC 7421 (gvio0)
Bacteria
4430
35.4 %
(1569)
50.3 % 
(2230)
24.1 % 
(1066)
62.0 %
28 aa 
3277 aa 





Synechococcus sp. WH 8102 (syne1)
Bacteria
2517
35.9 %
(903)
49.9 % 
(1256)
21.6 % 
(543)
59.4 %
31 aa 
10791 aa 





Synechocystis sp. PCC 6803 (syne0)
Bacteria
3167
39.1 %
(1237)
53.4 % 
(1691)
26.6 % 
(844)
47.7 %
29 aa 
4199 aa 





Thermosynechococcus elongatus BP-1 (telo0)
Bacteria
2475
39.8 %
(986)
53.1 % 
(1315)
26.5 % 
(656)
53.9 %
29 aa 
1706 aa 





Nostoc sp. PCC 7120 (anab0)
Bacteria
6132
33.3 %
(2041)
45.7 % 
(2802)
25.6 % 
(1567)
41.3 %
17 aa 
4936 aa 





Prochlorococcus marinus MED4 (pmar0)
Bacteria
1712
42.5 %
(728)
55.1 % 
(944)
25.9 % 
(444)
30.8 %
32 aa 
1521 aa 





Prochlorococcus marinus MIT9313 (pmar1)
Bacteria
2265
37.3 %
(845)
49.9 % 
(1130)
24.6 % 
(558)
50.7 %
33 aa 
1765 aa 





Prochlorococcus marinus marinus CCMP1375 (pmar2)
Bacteria
1882
39.2 %
(738)
50.4 % 
(949)
25.4 % 
(478)
36.4 %
30 aa 
1524 aa 





Deinococcus radiodurans R1 (drad0)
Bacteria
3102
37.0 %
(1148)
51.4 % 
(1593)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Bacillus halodurans C-125 (bhal0)
Bacteria
4066
40.8 %
(1658)
53.1 % 
(2160)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus anthracis str. Ames (bant0)
Bacteria
5311
35.4 %
(1882)
47.3 % 
(2510)
31.4 % 
(1666)
35.4 %
28 aa 
5017 aa 





Bacillus cereus ATCC 14579 (bcer0)
Bacteria
5255
36.9 %
(1939)
49.0 % 
(2577)
30.2 % 
(1586)
35.3 %
18 aa 
5017 aa 





Bacillus subtilis 168 (bsub0)
Bacteria
4106
41.4 %
(1701)
53.5 % 
(2196)
29.3 % 
(1202)
43.5 %
20 aa 
5488 aa 





Oceanobacillus iheyensis HTE831 (oihe0)
Bacteria
3496
42.5 %
(1486)
54.7 % 
(1912)
32.2 % 
(1127)
35.7 %
24 aa 
2373 aa 





Listeria innocua Clip11262 (linn0)
Bacteria
3043
42.0 %
(1277)
54.7 % 
(1664)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
45.2 %
(1287)
58.8 % 
(1674)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Staphylococcus aureus Mu50 (saur0)
Bacteria
2748
42.0 %
(1155)
53.5 % 
(1471)
27.6 % 
(758)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus N315 (saur1)
Bacteria
2624
44.2 %
(1161)
55.8 % 
(1465)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus MW2 (saur2)
Bacteria
2659
42.5 %
(1130)
53.7 % 
(1428)
28.4 % 
(756)
32.8 %
18 aa 
9904 aa 





Staphylococcus epidermidis ATCC 12228 (sepi0)
Bacteria
2485
41.3 %
(1026)
53.2 % 
(1321)
26.8 % 
(666)
32.0 %
25 aa 
9439 aa 





Clostridium acetobutylicum ATCC824 (cace0)
Bacteria
3848
40.6 %
(1561)
54.2 % 
(2084)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium perfringens 13 (cper0)
Bacteria
2723
42.9 %
(1167)
54.8 % 
(1492)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Clostridium tetani E88 (ctet0)
Bacteria
2432
42.5 %
(1034)
54.5 % 
(1326)
30.3 % 
(738)
28.6 %
71 aa 
2838 aa 





Thermoanaerobacter tengcongensis MB4T (tten0)
Bacteria
2588
43.1 %
(1116)
55.0 % 
(1424)
27.6 % 
(715)
37.6 %
37 aa 
2862 aa 





Enterococcus faecalis V583 (efae0)
Bacteria
3265
36.2 %
(1181)
48.6 % 
(1586)
27.7 % 
(906)
37.4 %
22 aa 
3173 aa 





Lactobacillus plantarum WCFS1 (lpla0)
Bacteria
3009
41.4 %
(1245)
55.3 % 
(1663)
27.9 % 
(840)
44.5 %
24 aa 
5289 aa 





Lactococcus lactis IL1403 (llac0)
Bacteria
2266
41.7 %
(945)
55.8 % 
(1264)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus agalactiae (saga0)
Bacteria
2124
41.9 %
(891)
55.1 % 
(1170)
26.8 % 
(570)
35.6 %
23 aa 
2274 aa 





Streptococcus agalactiae NEM316 (saga1)
Bacteria
2094
43.4 %
(909)
56.7 % 
(1188)
28.8 % 
(603)
35.6 %
30 aa 
2066 aa 





Streptococcus mutans UA159 (smut0)
Bacteria
1960
44.1 %
(864)
58.5 % 
(1146)
27.3 % 
(535)
36.8 %
25 aa 
2724 aa 





Streptococcus pneumoniae R6 (spne0)
Bacteria
2094
41.5 %
(868)
53.1 % 
(1112)
25.4 % 
(531)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae TIGR4 (spne1)
Bacteria
2043
43.4 %
(887)
56.0 % 
(1145)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes SF370 (spyo0)
Bacteria
1696
43.2 %
(732)
56.8 % 
(964)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
41.4 %
(764)
54.6 % 
(1007)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Streptococcus pyogenes MGAS315 (spyo2)
Bacteria
1865
40.4 %
(754)
53.5 % 
(998)
23.0 % 
(429)
38.6 %
38 aa 
1622 aa 





Streptococcus pyogenes SSI-1 (spyo3)
Bacteria
1861
39.9 %
(742)
53.0 % 
(986)
22.9 % 
(426)
38.6 %
27 aa 
1623 aa 





Onion yellows phytoplasma (oyel0)
Bacteria
754
45.0 %
(339)
57.0 % 
(430)
28.2 % 
(213)
27.7 %
33 aa 
1571 aa 





Mycoplasma gallisepticum R (mgal0)
Bacteria
726
41.7 %
(303)
52.5 % 
(381)
25.1 % 
(182)
31.5 %
37 aa 
1976 aa 





Mycoplasma genitalium G37 (mgen0)
Bacteria
480
50.0 %
(240)
64.6 % 
(310)
23.1 % 
(111)
31.7 %
37 aa 
1805 aa 





Mycoplasma penetrans (mpen0)
Bacteria
1037
36.4 %
(377)
46.8 % 
(485)
27.9 % 
(289)
25.7 %
47 aa 
3317 aa 





Mycoplasma pneumoniae M129 (mpne0)
Bacteria
688
38.1 %
(262)
49.0 % 
(337)
23.0 % 
(158)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis UAB CTIP (mpul0)
Bacteria
782
41.9 %
(328)
52.2 % 
(408)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Ureaplasma urealyticum (uure0)
Bacteria
611
40.3 %
(246)
50.2 % 
(307)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Fusobacterium nucleatum ATCC 25586 (fnuc0)
Bacteria
2067
38.9 %
(804)
50.2 % 
(1037)
25.8 % 
(534)
27.2 %
20 aa 
3165 aa 





Pirellula sp. 1 (rbal0)
Bacteria
7325
23.9 %
(1750)
35.8 % 
(2623)
23.0 % 
(1685)
55.4 %
35 aa 
8173 aa 





Caulobacter crescentus (ccre0)
Bacteria
3737
40.8 %
(1524)
56.2 % 
(2099)
22.9 % 
(854)
67.2 %
30 aa 
2479 aa 





Bradyrhizobium japonicum (bjap0)
Bacteria
8317
38.1 %
(3168)
53.8 % 
(4472)
24.7 % 
(2052)
64.1 %
30 aa 
5685 aa 





Rhodopseudomonas palustris (rpal0)
Bacteria
4814
41.9 %
(2018)
57.3 % 
(2759)
26.3 % 
(1264)
65.0 %
25 aa 
4335 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
42.2 %
(1348)
56.8 % 
(1815)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Brucella suis 1330 (bsui0)
Bacteria
3264
39.0 %
(1272)
51.9 % 
(1693)
23.5 % 
(767)
57.3 %
29 aa 
3420 aa 





Mesorhizobium loti MAFF303099 (mlot0)
Bacteria
7281
37.4 %
(2722)
53.0 % 
(3860)
22.7 % 
(1650)
62.5 %
30 aa 
3930 aa 





Agrobacterium tumefaciens C58 (atum0)
Bacteria
5301
41.5 %
(2200)
57.3 % 
(3039)
23.8 % 
(1263)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens C58 (Dupont) (atum1)
Bacteria
5402
41.1 %
(2220)
56.5 % 
(3053)
23.1 % 
(1246)
59.0 %
22 aa 
2831 aa 





Sinorhizobium meliloti 1021 (smel0)
Bacteria
6205
40.8 %
(2532)
56.8 % 
(3526)
23.8 % 
(1478)
62.2 %
31 aa 
2832 aa 





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
32.9 %
(452)
42.1 % 
(579)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia prowazekii Madrid E (rpro0)
Bacteria
834
48.7 %
(406)
60.7 % 
(506)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Bordetella bronchiseptica RB50 (bbro0)
Bacteria
4994
43.7 %
(2184)
58.9 % 
(2943)
22.9 % 
(1146)
68.1 %
31 aa 
4218 aa 





Bordetella parapertussis (bpar0)
Bacteria
4185
45.3 %
(1896)
60.6 % 
(2535)
23.3 % 
(975)
68.1 %
37 aa 
4218 aa 





Bordetella pertussis Tohama I (bper0)
Bacteria
3447
43.4 %
(1495)
63.4 % 
(2185)
22.2 % 
(766)
67.7 %
37 aa 
4196 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5116
38.2 %
(1955)
53.2 % 
(2720)
25.0 % 
(1279)
67.0 %
20 aa 
6889 aa 





Chromobacterium violaceum ATCC 12472 (cvio0)
Bacteria
4385
38.7 %
(1697)
53.8 % 
(2358)
25.0 % 
(1097)
64.8 %
51 aa 
4130 aa 





Neisseria meningitidis MC58 (nmen0)
Bacteria
2025
39.8 %
(805)
50.8 % 
(1028)
23.2 % 
(470)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
39.3 %
(811)
50.1 % 
(1034)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Nitrosomonas europaea ATCC 19718 (neur0)
Bacteria
2461
41.3 %
(1017)
56.2 % 
(1382)
25.8 % 
(636)
50.7 %
42 aa 
3064 aa 





Geobacter sulfurreducens PCA (gsul0)
Bacteria
3445
42.1 %
(1452)
55.7 % 
(1918)
28.4 % 
(978)
60.9 %
30 aa 
5899 aa 





Campylobacter jejuni  (cjej0)
Bacteria
1634
43.4 %
(709)
55.8 % 
(912)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Helicobacter hepaticus ATCC 51449 (hhep0)
Bacteria
1875
37.5 %
(704)
49.1 % 
(920)
28.5 % 
(535)
35.9 %
30 aa 
2894 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
37.2 %
(582)
48.3 % 
(756)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
39.8 %
(594)
50.9 % 
(759)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Wolinella succinogenes DSMZ 1740 (wsuc0)
Bacteria
2044
44.8 %
(915)
59.7 % 
(1220)
28.5 % 
(583)
48.5 %
33 aa 
2883 aa 





Shewanella oneidensis MR-1 (sone0)
Bacteria
4778
33.8 %
(1613)
48.3 % 
(2310)
25.5 % 
(1220)
45.9 %
30 aa 
5020 aa 





Buchnera aphidicola Sg (baph0)
Bacteria
552
66.1 %
(365)
74.8 % 
(413)
17.0 % 
(94)
25.3 %
38 aa 
1413 aa 





Buchnera aphidicola (Baizongia pistaciae) (baph1)
Bacteria
507
66.9 %
(339)
76.1 % 
(386)
18.5 % 
(94)
25.3 %
38 aa 
1404 aa 





Buchnera sp. APS (buch0)
Bacteria
574
67.4 %
(387)
76.7 % 
(440)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli K-12 MG1655 (ecol0)
Bacteria
4285
43.9 %
(1883)
56.3 % 
(2413)
27.3 % 
(1169)
50.7 %
14 aa 
2358 aa 





Escherichia coli O157:H7  (ecol1)
Bacteria
5447
36.5 %
(1990)
48.2 % 
(2624)
24.0 % 
(1309)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 EDL933 (ecol2)
Bacteria
5449
36.5 %
(1990)
48.5 % 
(2644)
24.3 % 
(1323)
50.4 %
9 aa 
5188 aa 





Escherichia coli CFT073 (ecol3)
Bacteria
5379
37.2 %
(2002)
48.0 % 
(2583)
25.1 % 
(1351)
50.5 %
14 aa 
3216 aa 





Photorhabdus luminescens laumondii TTO1 (plum0)
Bacteria
4683
35.9 %
(1682)
49.2 % 
(2305)
20.9 % 
(981)
42.8 %
30 aa 
16367 aa 





Salmonella Typhi CT18 (styp0)
Bacteria
4767
38.5 %
(1835)
49.7 % 
(2369)
25.8 % 
(1230)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4554
42.1 %
(1918)
54.3 % 
(2472)
27.2 % 
(1239)
52.2 %
14 aa 
5559 aa 





Salmonella enterica subsp. enterica serovar Typhi Ty2 (styp2)
Bacteria
4323
41.1 %
(1775)
52.8 % 
(2281)
26.7 % 
(1153)
52.1 %
13 aa 
3624 aa 





Shigella flexneri 2a 301 (sfle0)
Bacteria
4452
37.8 %
(1684)
52.1 % 
(2319)
25.6 % 
(1139)
50.7 %
13 aa 
1522 aa 





Shigella flexneri 2a str. 2457T (sfle1)
Bacteria
4068
39.8 %
(1618)
53.3 % 
(2170)
25.6 % 
(1043)
50.9 %
14 aa 
1522 aa 





Wigglesworthia brevipalpis (wbre0)
Bacteria
611
63.7 %
(389)
73.0 % 
(446)
23.7 % 
(145)
22.5 %
38 aa 
1405 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4083
39.1 %
(1597)
52.4 % 
(2138)
25.8 % 
(1054)
47.6 %
14 aa 
3705 aa 





Yersinia pestis KIM (ypes1)
Bacteria
4281
37.7 %
(1613)
50.0 % 
(2141)
25.8 % 
(1105)
47.7 %
14 aa 
3710 aa 





Candidatus Blochmannia floridanus (bflo0)
Bacteria
583
67.2 %
(392)
77.4 % 
(451)
23.0 % 
(134)
27.4 %
38 aa 
1420 aa 





Coxiella burnetii RSA 493 (cbur0)
Bacteria
2045
35.1 %
(717)
45.9 % 
(939)
23.4 % 
(479)
42.6 %
30 aa 
1734 aa 





Haemophilus ducreyi 35000HP (hduc0)
Bacteria
1717
41.1 %
(706)
50.8 % 
(873)
24.9 % 
(427)
38.2 %
30 aa 
4919 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
50.6 %
(864)
61.3 % 
(1048)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Pasteurella multocida PM70 (pmul0)
Bacteria
2014
49.3 %
(993)
62.0 % 
(1248)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Pseudomonas aeruginosa PAO1 (paer0)
Bacteria
5566
41.6 %
(2315)
58.0 % 
(3230)
26.8 % 
(1491)
66.6 %
10 aa 
5627 aa 





Pseudomonas putida KT2440 (pput0)
Bacteria
5350
40.7 %
(2176)
55.9 % 
(2988)
25.3 % 
(1356)
61.5 %
23 aa 
8682 aa 





Pseudomonas syringae pv. tomato str. DC3000 (psyr0)
Bacteria
5608
37.6 %
(2109)
52.7 % 
(2957)
23.8 % 
(1337)
58.3 %
24 aa 
6274 aa 





Vibrio cholerae N16961 (vcho0)
Bacteria
3828
39.1 %
(1496)
51.8 % 
(1981)
27.4 % 
(1049)
47.5 %
26 aa 
4558 aa 





Vibrio parahaemolyticus RIMD 2210633 (vpar0)
Bacteria
4832
38.6 %
(1863)
51.3 % 
(2481)
27.2 % 
(1316)
45.4 %
14 aa 
6084 aa 





Vibrio vulnificus CMCP6 (vvul0)
Bacteria
4537
40.1 %
(1819)
54.6 % 
(2476)
25.6 % 
(1161)
46.7 %
20 aa 
5206 aa 





Vibrio vulnificus YJ016 (vvul1)
Bacteria
5028
36.9 %
(1857)
50.0 % 
(2514)
26.7 % 
(1341)
46.7 %
34 aa 
5206 aa 





Xanthomonas axonopodis pv. citri 306 (xaxo0)
Bacteria
4427
38.9 %
(1722)
54.1 % 
(2395)
24.8 % 
(1100)
64.7 %
30 aa 
4753 aa 





Xanthomonas campestris pv. campestris ATCC 33913 (xcam0)
Bacteria
4181
39.9 %
(1668)
55.0 % 
(2301)
25.3 % 
(1056)
65.1 %
21 aa 
3961 aa 





Xylella fastidiosa 9a5c (xfas0)
Bacteria
2832
31.1 %
(882)
41.5 % 
(1176)
24.7 % 
(700)
52.6 %
30 aa 
3455 aa 





Xylella fastidiosa Temecula1 (xfas1)
Bacteria
2036
41.6 %
(846)
52.9 % 
(1078)
25.6 % 
(522)
51.8 %
30 aa 
3457 aa 





Leptospira interrogans serovar lai str. 56601 (lint0)
Bacteria
4725
25.1 %
(1184)
36.7 % 
(1736)
26.6 % 
(1255)
25.2 %
30 aa 
3141 aa 





Borrelia burgdorferi (bbur0)
Bacteria
1639
24.5 %
(401)
33.4 % 
(547)
28.0 % 
(459)
28.2 %
30 aa 
2166 aa 





Treponema pallidum (tpal0)
Bacteria
1031
39.8 %
(410)
50.6 % 
(522)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima (tmar0)
Bacteria
1846
46.4 %
(857)
57.8 % 
(1067)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Plasmodium falciparum 3D7 (pfal0)
Eukaryota
5268
27.1 %
(1428)
37.4 % 
(1971)
35.2 % 
(1853)
19.4 %
13 aa 
10589 aa 





Guillardia theta Nucleomorph (gthe0)
Eukaryota
632
42.1 %
(266)
49.8 % 
(315)
23.9 % 
(151)
26.4 %
29 aa 
2057 aa 





Leishmania major Friedlin (lmaj0)
Eukaryota
173
26.6 %
(46)
36.4 % 
(63)
25.4 % 
(44)
63.1 %
83 aa 
3112 aa 





Neurospora crassa (ncra0)
Eukaryota
10088
26.8 %
(2708)
38.2 % 
(3852)
20.4 % 
(2062)
56.0 %
9 aa 
10820 aa 





Saccharomyces cerevisiae (scer0)
Eukaryota
5869
37.8 %
(2220)
50.7 % 
(2976)
21.6 % 
(1266)
38.1 %
16 aa 
4910 aa 





Schizosaccharomyces pombe 972h- (spom0)
Eukaryota
5261
41.1 %
(2160)
54.0 % 
(2840)
20.8 % 
(1096)
36.1 %
14 aa 
4924 aa 





Drosophila melanogaster (dmel0)
Eukaryota
18302
42.5 %
(7783)
53.1 % 
(9725)
30.0 % 
(5488)
42.4 %
9 aa 
23054 aa 





Takifugu rubripes rubripes (trub0)
Eukaryota
37452
34.3 %
(12843)
41.8 % 
(15640)
16.6 % 
(6201)
45.3 %
4 aa 
5522 aa 





Danio rerio (drer0)
Eukaryota
26587
53.2 %
(14148)
63.6 % 
(16911)
24.1 % 
(6406)
52.4 %
22 aa 
5805 aa 





Homo sapiens (hsap0)
Eukaryota
28063
48.5 %
(13600)
57.3 % 
(16070)
26.3 % 
(7388)
40.8 %
19 aa 
17539 aa 





Homo sapiens cDNA (huge0)
Eukaryota
2037
46.2 %
(942)
62.2 % 
(1268)
21.9 % 
(447)
-
73 aa 
4594 aa 





Mus musculus (mmus0)
Eukaryota
24928
50.3 %
(12538)
60.1 % 
(14984)
26.6 % 
(6620)
41.8 %
22 aa 
5928 aa 





Rattus norvegicus (rnor0)
Eukaryota
28682
52.0 %
(14907)
61.4 % 
(17605)
28.0 % 
(8019)
41.9 %
16 aa 
7340 aa 





Ciona intestinalis (cint0)
Eukaryota
15865
41.9 %
(6643)
52.1 % 
(8258)
24.6 % 
(3901)
41.7 %
2 aa 
17232 aa 





Caenorhabditis briggsae (cbri0)
Eukaryota
14713
39.2 %
(5771)
49.4 % 
(7263)
36.2 % 
(5329)
37.4 %
22 aa 
7747 aa 





Caenorhabditis elegans (cele0)
Eukaryota
22220
31.6 %
(7015)
41.0 % 
(9114)
36.8 % 
(8176)
35.4 %
6 aa 
13100 aa 





Encephalitozoon cuniculi (ecun0)
Eukaryota
1996
34.5 %
(688)
45.5 % 
(909)
20.6 % 
(412)
47.3 %
52 aa 
3436 aa 





Oryza sativa (japonica cultivar-group) (osat0)
Eukaryota
16724
19.6 %
(3285)
27.2 % 
(4548)
22.1 % 
(3699)
43.6 %
13 aa 
2876 aa 





Arabidopsis thaliana (atha0)
Eukaryota
28723
37.3 %
(10709)
50.7 % 
(14552)
26.7 % 
(7655)
36.0 %
19 aa 
5155 aa 





Enterobacteria phage 186 (bp180)
Viruses
46
17.4 %
(8)
17.4 % 
(8)
13.0 % 
(6)
53.1 %
58 aa 
812 aa 





Bacteriophage 44RR2.8t (bp441)
Viruses
252
15.5 %
(39)
21.8 % 
(55)
6.7 % 
(17)
43.9 %
32 aa 
1420 aa 





Bacteriophage A511 (bpa50)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
36.7 %
106 aa 
562 aa 





Bacteriophage Aeh1 (bpae0)
Viruses
331
10.3 %
(34)
15.1 % 
(50)
11.2 % 
(37)
42.8 %
28 aa 
1358 aa 





Burkholderia cepacia phage Bcep781 (bpbc0)
Viruses
61
8.2 %
(5)
9.8 % 
(6)
4.9 % 
(3)
63.3 %
38 aa 
873 aa 





Pseudomonas aeruginosa phage phi CTX Viruses. (bpct0)
Viruses
47
2.1 %
(1)
8.5 % 
(4)
12.8 % 
(6)
62.6 %
35 aa 
904 aa 





Bacteriophage phig1e (bpg10)
Viruses
50
0.0 %
(0)
12.0 % 
(6)
12.0 % 
(6)
42.7 %
49 aa 
1662 aa 





Halovirus HF2 (bphf0)
Viruses
114
6.1 %
(7)
10.5 % 
(12)
6.1 % 
(7)
55.8 %
29 aa 
1288 aa 





Haemophilus phage HP1 (bphp0)
Viruses
41
7.3 %
(3)
12.2 % 
(5)
12.2 % 
(5)
40.0 %
61 aa 
925 aa 





Haemophilus phage HP2 (bphp1)
Viruses
36
5.6 %
(2)
11.1 % 
(4)
13.9 % 
(5)
39.9 %
61 aa 
910 aa 





Bacteriophage K139 (bpk10)
Viruses
44
2.3 %
(1)
9.1 % 
(4)
6.8 % 
(3)
48.9 %
53 aa 
800 aa 





Bacteriophage KVP40 (bpkv0)
Viruses
381
9.7 %
(37)
15.2 % 
(58)
11.3 % 
(43)
42.6 %
36 aa 
1256 aa 





Bacteriophage L-413C (bpl40)
Viruses
40
5.0 %
(2)
10.0 % 
(4)
17.5 % 
(7)
52.1 %
56 aa 
913 aa 





Bacteriophage Mu (bpmu0)
Viruses
53
9.4 %
(5)
11.3 % 
(6)
11.3 % 
(6)
52.1 %
39 aa 
690 aa 





Bacteriophage P2 (bpp20)
Viruses
42
4.8 %
(2)
11.9 % 
(5)
14.3 % 
(6)
50.2 %
56 aa 
815 aa 





Bacteriophage P4 (bpp40)
Viruses
12
8.3 %
(1)
16.7 % 
(2)
0.0 % 
(0)
49.5 %
88 aa 
777 aa 





Pseudomonas aeruginosa phage PA01 (bppa0)
Viruses
34
11.8 %
(4)
14.7 % 
(5)
8.8 % 
(3)
-
23 aa 
745 aa 





Pseudomonas phage phiKZ (bpph0)
Viruses
306
3.9 %
(12)
9.2 % 
(28)
11.8 % 
(36)
36.8 %
63 aa 
2237 aa 





Virus PhiCh1 (bpph1)
Viruses
98
6.1 %
(6)
9.2 % 
(9)
5.1 % 
(5)
61.9 %
54 aa 
581 aa 





Enterobacteria phage RB69 (bprb0)
Viruses
256
15.2 %
(39)
22.3 % 
(57)
9.4 % 
(24)
37.7 %
19 aa 
1277 aa 





Enterobacteria phage RB49 (bprb1)
Viruses
272
12.9 %
(35)
19.1 % 
(52)
11.0 % 
(30)
40.4 %
32 aa 
1246 aa 





Haemophilus influenzae phage Rd (bprd0)
Viruses
47
8.5 %
(4)
14.9 % 
(7)
8.5 % 
(4)
-
38 aa 
731 aa 





Bacteriophage RM 378 (bprm0)
Viruses
146
4.8 %
(7)
11.6 % 
(17)
9.6 % 
(14)
42.5 %
27 aa 
1019 aa 





Enterobacteria phage T4 (bpt40)
Viruses
278
15.8 %
(44)
20.9 % 
(58)
10.4 % 
(29)
35.3 %
26 aa 
1289 aa 





Vibrio harveyi bacteriophage VHML (bpvh0)
Viruses
57
8.8 %
(5)
14.0 % 
(8)
7.0 % 
(4)
50.6 %
33 aa 
1023 aa 





Bacteriophage WPhi (bpwp0)
Viruses
44
6.8 %
(3)
9.1 % 
(4)
11.4 % 
(5)
51.7 %
56 aa 
815 aa 





Staphylococcus phage 44AHJD (bp440)
Viruses
21
0.0 %
(0)
4.8 % 
(1)
9.5 % 
(2)
29.6 %
55 aa 
755 aa 





Acyrthosiphon pisum bacteriophage APSE-1 (bpap0)
Viruses
54
9.3 %
(5)
11.1 % 
(6)
18.5 % 
(10)
43.9 %
73 aa 
993 aa 





Bacteriophage B103 (bpb11)
Viruses
17
29.4 %
(5)
35.3 % 
(6)
5.9 % 
(1)
37.7 %
100 aa 
860 aa 





Streptococcus phage Cp-1 (bpcp0)
Viruses
28
7.1 %
(2)
7.1 % 
(2)
14.3 % 
(4)
38.9 %
62 aa 
586 aa 





Enterobacteria phage epsilon15 (bpep0)
Viruses
49
4.1 %
(2)
12.2 % 
(6)
18.4 % 
(9)
50.8 %
35 aa 
1070 aa 





Bacillus phage GA-1 (bpga0)
Viruses
35
14.3 %
(5)
20.0 % 
(7)
22.9 % 
(8)
34.7 %
25 aa 
740 aa 





Pseudomonas phage gh-1 (bpgh0)
Viruses
42
19.0 %
(8)
28.6 % 
(12)
7.1 % 
(3)
57.4 %
25 aa 
1392 aa 





Bacteriophage H-19B (bph10)
Viruses
22
9.1 %
(2)
18.2 % 
(4)
13.6 % 
(3)
45.9 %
44 aa 
315 aa 





Mycoplasma virus P1 (bpp10)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





Bacteriophage P22 (bpp21)
Viruses
36
16.7 %
(6)
22.2 % 
(8)
5.6 % 
(2)
47.1 %
47 aa 
667 aa 





Pseudomonas aeruginosa phage PaP3 (bppa1)
Viruses
69
7.2 %
(5)
11.6 % 
(8)
11.6 % 
(8)
52.1 %
26 aa 
1056 aa 





Bacteriophage phiYeO3-12 (bpph2)
Viruses
59
18.6 %
(11)
22.0 % 
(13)
15.3 % 
(9)
50.6 %
25 aa 
1320 aa 





Yersinia pestis phage phiA1122 (bpphD)
Viruses
50
16.0 %
(8)
20.0 % 
(10)
10.0 % 
(5)
48.3 %
27 aa 
1318 aa 





Staphylococcus aureus phage phiP68 (bpphE)
Viruses
22
4.5 %
(1)
9.1 % 
(2)
9.1 % 
(2)
29.3 %
55 aa 
755 aa 





bacteriophage phiKMV (bpphF)
Viruses
48
10.4 %
(5)
22.9 % 
(11)
12.5 % 
(6)
62.3 %
64 aa 
1337 aa 





Bacillus phage PZA (bppz0)
Viruses
27
14.8 %
(4)
18.5 % 
(5)
11.1 % 
(3)
39.7 %
37 aa 
854 aa 





Roseophage SIO1 (bpsi0)
Viruses
34
0.0 %
(0)
0.0 % 
(0)
11.8 % 
(4)
46.2 %
77 aa 
1484 aa 





Bacteriophage SP6 (bpsp0)
Viruses
20
20.0 %
(4)
30.0 % 
(6)
5.0 % 
(1)
46.1 %
42 aa 
874 aa 





Salmonella typhimurium phage ST64B (bpst0)
Viruses
56
10.7 %
(6)
16.1 % 
(9)
8.9 % 
(5)
51.0 %
54 aa 
642 aa 





Salmonella typhimurium bacteriophage ST64T (bpst1)
Viruses
65
9.2 %
(6)
12.3 % 
(8)
10.8 % 
(7)
47.5 %
37 aa 
725 aa 





Bacteriophage T7 (bpt70)
Viruses
58
15.5 %
(9)
17.2 % 
(10)
12.1 % 
(7)
48.4 %
29 aa 
1318 aa 





Vibriophage VpV262 (bpvp0)
Viruses
67
1.5 %
(1)
6.0 % 
(4)
9.0 % 
(6)
49.5 %
46 aa 
1536 aa 





Bacteriophage T3 (bpt30)
Viruses
44
18.2 %
(8)
22.7 % 
(10)
15.9 % 
(7)
49.9 %
25 aa 
884 aa 





Mycoplasma virus P1 (bpp11)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





Cyanophage P60 (bpp60)
Viruses
80
11.2 %
(9)
16.2 % 
(13)
6.2 % 
(5)
53.2 %
40 aa 
680 aa 





Shigella flexneri bacteriophage V (bpsf1)
Viruses
53
9.4 %
(5)
13.2 % 
(7)
13.2 % 
(7)
50.8 %
56 aa 
611 aa 





Bacteriophage 933W (bp930)
Viruses
80
6.2 %
(5)
11.2 % 
(9)
12.5 % 
(10)
49.4 %
51 aa 
2806 aa 





Bacteriophage A118 (bpa10)
Viruses
72
2.8 %
(2)
12.5 % 
(9)
13.9 % 
(10)
36.1 %
21 aa 
1794 aa 





Bacteriophage B1 (bpb10)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
36.8 %
65 aa 
273 aa 





Enterobacteria phage BF23 (bpbf0)
Viruses
8
12.5 %
(1)
12.5 % 
(1)
12.5 % 
(1)
38.5 %
75 aa 
595 aa 





Lactococcus phage c2 (bpc20)
Viruses
39
0.0 %
(0)
5.1 % 
(2)
15.4 % 
(6)
36.3 %
22 aa 
706 aa 





Pseudomonas phage D3 (bpd30)
Viruses
94
7.4 %
(7)
11.7 % 
(11)
12.8 % 
(12)
57.8 %
32 aa 
909 aa 





Enterobacteria phage HK022 (bphk0)
Viruses
57
12.3 %
(7)
15.8 % 
(9)
10.5 % 
(6)
49.5 %
50 aa 
1183 aa 





Bacteriophage HK97 (bphk2)
Viruses
61
13.1 %
(8)
18.0 % 
(11)
11.5 % 
(7)
49.8 %
32 aa 
1296 aa 





Mycobacterium phage L5 (bpl50)
Viruses
85
8.2 %
(7)
14.1 % 
(12)
7.1 % 
(6)
62.3 %
37 aa 
837 aa 





Bacteriophage lambda (bpla0)
Viruses
66
18.2 %
(12)
27.3 % 
(18)
10.6 % 
(7)
49.9 %
28 aa 
1132 aa 





Bacteriophage N15 (bpn10)
Viruses
60
10.0 %
(6)
21.7 % 
(13)
6.7 % 
(4)
51.2 %
18 aa 
1324 aa 





Bacteriophage P27 (bpp22)
Viruses
58
10.3 %
(6)
15.5 % 
(9)
12.1 % 
(7)
49.4 %
51 aa 
649 aa 





Bacteriophage phi-105 (bpph3)
Viruses
51
5.9 %
(3)
15.7 % 
(8)
11.8 % 
(6)
42.7 %
56 aa 
1018 aa 





Bacteriophage phi-C31 (bpph4)
Viruses
55
5.5 %
(3)
14.5 % 
(8)
14.5 % 
(8)
63.6 %
41 aa 
729 aa 





Bacteriophage phiE125 (bpph6)
Viruses
71
2.8 %
(2)
16.9 % 
(12)
11.3 % 
(8)
61.2 %
43 aa 
1354 aa 





Bacteriophage phi-BT1 (bpphC)
Viruses
55
3.6 %
(2)
16.4 % 
(9)
16.4 % 
(9)
62.8 %
46 aa 
808 aa 





Methanobacterium phage psiM2 (bpps0)
Viruses
31
0.0 %
(0)
3.2 % 
(1)
6.5 % 
(2)
46.3 %
90 aa 
1186 aa 





Bacteriophage PY54 (bppy0)
Viruses
67
4.5 %
(3)
14.9 % 
(10)
9.0 % 
(6)
44.6 %
54 aa 
1330 aa 





Streptococcus thermophilus bacteriophage Sfi11 (bpsf0)
Viruses
25
0.0 %
(0)
4.0 % 
(1)
12.0 % 
(3)
38.6 %
53 aa 
1510 aa 





Bacteriophage sk1 (bpsk0)
Viruses
54
3.7 %
(2)
5.6 % 
(3)
11.1 % 
(6)
34.5 %
39 aa 
999 aa 





Bacteriophage SPP1 (bpsp2)
Viruses
106
3.8 %
(4)
7.5 % 
(8)
23.6 % 
(25)
43.7 %
51 aa 
846 aa 





Stx2 converting bacteriophage I (bpst7)
Viruses
165
3.0 %
(5)
6.7 % 
(11)
17.6 % 
(29)
49.4 %
33 aa 
2806 aa 





Bacteriophage bIL170 (bpbi0)
Viruses
64
1.6 %
(1)
4.7 % 
(3)
10.9 % 
(7)
34.3 %
33 aa 
916 aa 





Bacteriophage bIL285 (bpbi1)
Viruses
62
4.8 %
(3)
8.1 % 
(5)
9.7 % 
(6)
35.2 %
42 aa 
894 aa 





Bacteriophage bIL286 (bpbi2)
Viruses
61
6.6 %
(4)
13.1 % 
(8)
13.1 % 
(8)
35.3 %
32 aa 
1640 aa 





Bacteriophage bIL309 (bpbi3)
Viruses
56
5.4 %
(3)
10.7 % 
(6)
14.3 % 
(8)
35.7 %
40 aa 
1441 aa 





Bacteriophage bIL310 (bpbi4)
Viruses
29
0.0 %
(0)
13.8 % 
(4)
10.3 % 
(3)
35.9 %
28 aa 
542 aa 





Bacteriophage bIL311 (bpbi5)
Viruses
22
13.6 %
(3)
27.3 % 
(6)
9.1 % 
(2)
34.2 %
38 aa 
489 aa 





Bacteriophage bIL312 (bpbi6)
Viruses
27
3.7 %
(1)
11.1 % 
(3)
11.1 % 
(3)
33.0 %
46 aa 
480 aa 





Lactococcus phage BK5-T (bpbk0)
Viruses
63
4.8 %
(3)
9.5 % 
(6)
15.9 % 
(10)
35.0 %
42 aa 
1904 aa 





Mycobacteriophage Bxb1 (bpbx0)
Viruses
86
7.0 %
(6)
14.0 % 
(12)
12.8 % 
(11)
63.6 %
31 aa 
823 aa 





Mycobacteriophage D29 (bpd20)
Viruses
79
8.9 %
(7)
19.0 % 
(15)
10.1 % 
(8)
63.5 %
28 aa 
837 aa 





Bacteriophage HK620 (bphk1)
Viruses
58
8.6 %
(5)
10.3 % 
(6)
8.6 % 
(5)
46.7 %
27 aa 
722 aa 





Listeria phage 2389 (bpl20)
Viruses
57
7.0 %
(4)
12.3 % 
(7)
12.3 % 
(7)
34.7 %
48 aa 
1026 aa 





Lactobacillus casei bacteriophage A2 (bplc0)
Viruses
61
4.9 %
(3)
13.1 % 
(8)
8.2 % 
(5)
44.9 %
59 aa 
1621 aa 





Lactococcus phage P335 (bpp30)
Viruses
49
8.2 %
(4)
14.3 % 
(7)
10.2 % 
(5)
35.4 %
54 aa 
1711 aa 





Bacteriophage phi3626 (bpph5)
Viruses
50
14.0 %
(7)
22.0 % 
(11)
14.0 % 
(7)
28.4 %
39 aa 
983 aa 





Bacteriophage phi ETA (bpph7)
Viruses
66
6.1 %
(4)
13.6 % 
(9)
13.6 % 
(9)
35.4 %
48 aa 
989 aa 





Temperate phage PhiNIH1.1 (bpph8)
Viruses
55
5.5 %
(3)
12.7 % 
(7)
12.7 % 
(7)
38.6 %
49 aa 
1086 aa 





Staphylococcus aureus prophage phiPV83 (bpph9)
Viruses
65
7.7 %
(5)
13.8 % 
(9)
13.8 % 
(9)
33.5 %
46 aa 
1313 aa 





Staphylococcus aureus temperate phage phiSLT (bpphA)
Viruses
62
11.3 %
(7)
19.4 % 
(12)
14.5 % 
(9)
33.3 %
35 aa 
1374 aa 





Lactobacillus bacteriophage phi adh (bpphB)
Viruses
63
9.5 %
(6)
14.3 % 
(9)
12.7 % 
(8)
35.6 %
49 aa 
1487 aa 





Methanothermobacter wolfeii prophage psiM100 (bpps1)
Viruses
37
5.4 %
(2)
10.8 % 
(4)
10.8 % 
(4)
45.7 %
85 aa 
1157 aa 





Bacteriophage r1t (bpr10)
Viruses
50
6.0 %
(3)
14.0 % 
(7)
14.0 % 
(7)
35.5 %
54 aa 
667 aa 





Staphylococcus aureus bacteriophage PVL (bpsa0)
Viruses
62
6.5 %
(4)
12.9 % 
(8)
17.7 % 
(11)
33.6 %
43 aa 
759 aa 





Bacteriophage SPBc2 (bpsp1)
Viruses
185
9.2 %
(17)
17.8 % 
(33)
15.1 % 
(28)
34.6 %
21 aa 
2285 aa 





Streptococcus pneumoniae bacteriophage MM1 (bpsp3)
Viruses
53
11.3 %
(6)
15.1 % 
(8)
11.3 % 
(6)
38.4 %
57 aa 
1989 aa 





Streptococcus thermophilus bacteriophage 7201 (bpst2)
Viruses
46
8.7 %
(4)
17.4 % 
(8)
10.9 % 
(5)
38.7 %
47 aa 
1554 aa 





Streptococcus thermophilus bacteriophage DT1 (bpst3)
Viruses
47
4.3 %
(2)
14.9 % 
(7)
4.3 % 
(2)
39.1 %
36 aa 
1278 aa 





Streptococcus thermophilus temperate bacteriophage O1205 (bpst4)
Viruses
57
3.5 %
(2)
7.0 % 
(4)
8.8 % 
(5)
38.3 %
42 aa 
1517 aa 





Streptococcus thermophilus bacteriophage Sfi19 (bpst5)
Viruses
45
4.4 %
(2)
15.6 % 
(7)
8.9 % 
(4)
38.3 %
40 aa 
1626 aa 





Streptococcus thermophilus bacteriophage Sfi21 (bpst6)
Viruses
50
4.0 %
(2)
18.0 % 
(9)
12.0 % 
(6)
37.6 %
48 aa 
1560 aa 





Mycobacteriophage TM4 (bptm0)
Viruses
89
2.2 %
(2)
5.6 % 
(5)
12.4 % 
(11)
68.1 %
29 aa 
1229 aa 





Lactococcus lactis bacteriophage TP901-1 (bptp0)
Viruses
56
7.1 %
(4)
12.5 % 
(7)
7.1 % 
(4)
35.4 %
47 aa 
937 aa 





Bacteriophage Tuc2009 (bptu0)
Viruses
56
8.9 %
(5)
12.5 % 
(7)
8.9 % 
(5)
36.2 %
32 aa 
1025 aa 





Lactococcus lactis bacteriophage ul36 (bpul0)
Viruses
58
5.2 %
(3)
8.6 % 
(5)
13.8 % 
(8)
35.8 %
50 aa 
908 aa 





Bacteriophage VT2-Sa (bpvt0)
Viruses
82
7.3 %
(6)
12.2 % 
(10)
13.4 % 
(11)
49.9 %
42 aa 
2806 aa 





Alteromonas phage PM2 (bppm0)
Viruses
22
4.5 %
(1)
9.1 % 
(2)
31.8 % 
(7)
42.2 %
30 aa 
634 aa 





Enterobacteria phage PRD1 (bppr0)
Viruses
22
13.6 %
(3)
18.2 % 
(4)
36.4 % 
(8)
48.1 %
42 aa 
591 aa 






DATE September 17 2003

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf 






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.





Aeropyrum pernix K1 (aper0)
Archaea
2694
18.6 %
(501)
28.2 % 
(759)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Sulfolobus solfataricus P2 (ssol0)
Archaea
2977
28.1 %
(837)
43.4 % 
(1292)
23.9 % 
(711)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii 7 (stok0)
Archaea
2826
27.6 %
(781)
42.6 % 
(1205)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum IM2 (paer1)
Archaea
2605
24.1 %
(628)
39.4 % 
(1026)
25.9 % 
(674)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus DSM4304 (aful0)
Archaea
2407
33.0 %
(794)
50.0 % 
(1203)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Methanosarcina acetivorans C2A (mace0)
Archaea
4544
27.0 %
(1227)
45.2 % 
(2053)
27.7 % 
(1260)
42.7 %
41 aa 
4226 aa 





Methanosarcina mazei Goe1 (mmaz0)
Archaea
3371
28.6 %
(963)
47.1 % 
(1587)
24.1 % 
(812)
41.5 %
16 aa 
1898 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
28.4 %
(740)
43.6 % 
(1135)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Methanobacterium thermoautotrophicum Delta H (mthe0)
Archaea
1869
34.6 %
(647)
52.0 % 
(972)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanococcus jannaschii DSM2661 (mjan0)
Archaea
1770
31.5 %
(558)
48.1 % 
(851)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
28.5 %
(480)
45.1 % 
(760)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Pyrococcus abyssi Orsay (paby0)
Archaea
1765
36.0 %
(636)
52.2 % 
(922)
24.6 % 
(435)
44.7 %
18 aa 
2122 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
32.7 %
(676)
49.0 % 
(1011)
24.8 % 
(513)
40.7 %
21 aa 
1740 aa 





Pyrococcus horikoshii OT3 (phor0)
Archaea
2064
29.3 %
(604)
42.0 % 
(866)
28.1 % 
(579)
41.9 %
50 aa 
4436 aa 





Thermoplasma acidophilum DSM1728 (taci0)
Archaea
1478
37.6 %
(556)
54.8 % 
(810)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium GSS1 (tvol0)
Archaea
1526
37.2 %
(568)
53.2 % 
(812)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Corynebacterium efficiens YS-314 (ceff0)
Bacteria
3006
32.3 %
(972)
48.7 % 
(1465)
25.1 % 
(754)
63.0 %
33 aa 
3022 aa 





Corynebacterium glutamicum ATCC 13032 (cglu0)
Bacteria
3099
33.1 %
(1027)
49.1 % 
(1521)
25.6 % 
(793)
53.8 %
33 aa 
2993 aa 





Mycobacterium leprae TN (mlep0)
Bacteria
1605
41.6 %
(668)
55.7 % 
(894)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium tuberculosis H37Rv (mtub0)
Bacteria
3869
33.4 %
(1294)
50.8 % 
(1964)
22.1 % 
(856)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
30.6 %
(1282)
46.0 % 
(1927)
21.3 % 
(890)
65.6 %
30 aa 
4151 aa 





Streptomyces avermitilis (save0)
Bacteria
7671
31.2 %
(2393)
50.7 % 
(3893)
22.9 % 
(1757)
70.7 %
33 aa 
7746 aa 





Streptomyces coelicolor A3(2) (scoe0)
Bacteria
7897
29.3 %
(2317)
49.7 % 
(3927)
22.5 % 
(1777)
72.0 %
19 aa 
7463 aa 





Bifidobacterium longum NCC2705 (blon0)
Bacteria
1729
41.4 %
(715)
56.3 % 
(974)
25.0 % 
(432)
60.1 %
15 aa 
3172 aa 





Tropheryma whipplei TW08/27 (twhi0)
Bacteria
783
48.1 %
(377)
62.1 % 
(486)
30.5 % 
(239)
46.3 %
29 aa 
2308 aa 





Tropheryma whipplei str. Twist (twhi1)
Bacteria
808
46.8 %
(378)
60.8 % 
(491)
32.1 % 
(259)
46.3 %
39 aa 
2312 aa 





Aquifex aeolicus VF5 (aaeo0)
Bacteria
1553
42.9 %
(666)
58.1 % 
(902)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Bacteroides thetaiotaomicron VPI-5482 (bthe0)
Bacteria
4852
28.5 %
(1381)
48.9 % 
(2371)
32.3 % 
(1565)
42.8 %
32 aa 
2183 aa 





Chlamydia muridarum Nigg (cmur0)
Bacteria
911
39.0 %
(355)
51.7 % 
(471)
27.1 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis D/UW-3/CX (ctra0)
Bacteria
894
39.7 %
(355)
52.2 % 
(467)
27.2 % 
(243)
41.3 %
45 aa 
1786 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1109
32.4 %
(359)
42.6 % 
(472)
31.4 % 
(348)
40.6 %
30 aa 
1826 aa 





Chlamydophila caviae GPIC (ccav0)
Bacteria
1005
36.8 %
(370)
48.3 % 
(485)
30.5 % 
(307)
39.2 %
30 aa 
3346 aa 





Chlamydophila pneumoniae CWL029 (cpne1)
Bacteria
1052
34.3 %
(361)
45.2 % 
(475)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
33.9 %
(362)
44.8 % 
(479)
31.2 % 
(333)
40.6 %
40 aa 
1826 aa 





Chlorobium tepidum TLS (ctep0)
Bacteria
2252
35.5 %
(799)
50.3 % 
(1132)
21.4 % 
(483)
56.5 %
30 aa 
1510 aa 





Synechocystis sp. PCC 6803 (syne0)
Bacteria
3169
35.1 %
(1112)
51.5 % 
(1632)
26.6 % 
(844)
47.7 %
28 aa 
4199 aa 





Thermosynechococcus elongatus BP-1 (telo0)
Bacteria
2475
35.6 %
(880)
51.3 % 
(1269)
26.5 % 
(656)
53.9 %
29 aa 
1706 aa 





Nostoc sp. PCC 7120 (anab0)
Bacteria
6129
29.5 %
(1807)
44.1 % 
(2703)
25.5 % 
(1565)
41.3 %
17 aa 
4936 aa 





Deinococcus radiodurans R1 (drad0)
Bacteria
3102
32.2 %
(1000)
48.9 % 
(1516)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Bacillus halodurans C-125 (bhal0)
Bacteria
4066
36.2 %
(1472)
50.4 % 
(2048)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus anthracis str. Ames (bant0)
Bacteria
5311
30.7 %
(1628)
45.3 % 
(2406)
31.4 % 
(1666)
35.4 %
28 aa 
5017 aa 





Bacillus cereus ATCC 14579 (bcer0)
Bacteria
5255
32.1 %
(1689)
47.3 % 
(2484)
30.2 % 
(1586)
35.3 %
18 aa 
5017 aa 





Bacillus subtilis 168 (bsub0)
Bacteria
4100
36.7 %
(1506)
51.4 % 
(2107)
29.3 % 
(1200)
43.5 %
20 aa 
4930 aa 





Oceanobacillus iheyensis HTE831 (oihe0)
Bacteria
3496
37.4 %
(1307)
52.7 % 
(1844)
32.2 % 
(1127)
35.7 %
24 aa 
2373 aa 





Listeria innocua Clip11262 (linn0)
Bacteria
3043
37.1 %
(1128)
52.6 % 
(1602)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
40.9 %
(1163)
56.6 % 
(1610)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Staphylococcus aureus Mu50 (saur0)
Bacteria
2748
37.8 %
(1040)
51.3 % 
(1411)
27.6 % 
(758)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus N315 (saur1)
Bacteria
2624
39.9 %
(1047)
53.7 % 
(1408)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus MW2 (saur2)
Bacteria
2632
38.7 %
(1018)
51.7 % 
(1360)
28.4 % 
(747)
32.8 %
18 aa 
9904 aa 





Staphylococcus epidermidis ATCC 12228 (sepi0)
Bacteria
2419
37.6 %
(909)
51.7 % 
(1250)
26.8 % 
(649)
32.1 %
25 aa 
9439 aa 





Clostridium acetobutylicum ATCC824 (cace0)
Bacteria
3848
35.8 %
(1377)
52.3 % 
(2013)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium perfringens 13 (cper0)
Bacteria
2723
37.9 %
(1032)
53.0 % 
(1443)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Clostridium tetani E88 (ctet0)
Bacteria
2432
37.4 %
(909)
52.7 % 
(1281)
30.3 % 
(738)
28.6 %
71 aa 
2838 aa 





Thermoanaerobacter tengcongensis MB4T (tten0)
Bacteria
2588
38.5 %
(996)
52.6 % 
(1362)
27.6 % 
(715)
37.6 %
37 aa 
2862 aa 





Enterococcus faecalis V583 (efae0)
Bacteria
3113
33.1 %
(1031)
47.9 % 
(1490)
27.8 % 
(865)
37.5 %
27 aa 
3173 aa 





Lactobacillus plantarum WCFS1 (lpla0)
Bacteria
3009
36.9 %
(1110)
53.9 % 
(1622)
27.9 % 
(840)
44.5 %
24 aa 
5289 aa 





Lactococcus lactis IL1403 (llac0)
Bacteria
2266
38.0 %
(861)
53.9 % 
(1222)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus agalactiae (saga0)
Bacteria
2124
37.6 %
(798)
53.3 % 
(1133)
26.8 % 
(570)
35.6 %
23 aa 
2274 aa 





Streptococcus agalactiae NEM316 (saga1)
Bacteria
2094
38.9 %
(815)
55.3 % 
(1158)
28.8 % 
(603)
35.6 %
30 aa 
2066 aa 





Streptococcus mutans UA159 (smut0)
Bacteria
1960
39.6 %
(777)
56.4 % 
(1106)
27.3 % 
(535)
36.8 %
25 aa 
2724 aa 





Streptococcus pneumoniae TIGR4 (spne0)
Bacteria
2094
37.7 %
(789)
52.0 % 
(1088)
25.4 % 
(531)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae R6 (spne1)
Bacteria
2043
39.2 %
(800)
55.0 % 
(1123)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes SF370 (spyo0)
Bacteria
1696
39.4 %
(668)
54.9 % 
(931)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
37.1 %
(685)
52.8 % 
(974)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Streptococcus pyogenes MGAS315 (spyo2)
Bacteria
1865
36.5 %
(681)
51.7 % 
(964)
23.0 % 
(429)
38.6 %
38 aa 
1622 aa 





Streptococcus pyogenes SSI-1 (spyo3)
Bacteria
1861
36.2 %
(674)
51.3 % 
(954)
22.9 % 
(426)
38.6 %
27 aa 
1623 aa 





Mycoplasma genitalium G37 (mgen0)
Bacteria
480
46.2 %
(222)
62.5 % 
(300)
23.1 % 
(111)
31.7 %
37 aa 
1805 aa 





Mycoplasma penetrans (mpen0)
Bacteria
1037
32.7 %
(339)
45.7 % 
(474)
27.9 % 
(289)
25.7 %
47 aa 
3317 aa 





Mycoplasma pneumoniae M129 (mpne0)
Bacteria
688
35.5 %
(244)
48.1 % 
(331)
22.8 % 
(157)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis UAB CTIP (mpul0)
Bacteria
782
37.2 %
(291)
50.8 % 
(397)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Ureaplasma urealyticum (uure0)
Bacteria
611
36.2 %
(221)
48.4 % 
(296)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Fusobacterium nucleatum ATCC 25586 (fnuc0)
Bacteria
2067
33.9 %
(701)
47.9 % 
(990)
25.8 % 
(534)
27.2 %
20 aa 
3165 aa 





Caulobacter crescentus (ccre0)
Bacteria
3737
35.9 %
(1340)
53.6 % 
(2002)
22.9 % 
(854)
67.2 %
30 aa 
2479 aa 





Bradyrhizobium japonicum (bjap0)
Bacteria
8317
34.2 %
(2843)
51.6 % 
(4292)
24.7 % 
(2052)
64.1 %
30 aa 
5685 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
38.1 %
(1220)
54.2 % 
(1734)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Brucella suis 1330 (bsui0)
Bacteria
3264
35.3 %
(1151)
49.6 % 
(1619)
23.5 % 
(767)
57.3 %
29 aa 
3420 aa 





Mesorhizobium loti MAFF303099 (mlot0)
Bacteria
7281
33.6 %
(2449)
51.1 % 
(3719)
22.7 % 
(1650)
61.9 %
30 aa 
3930 aa 





Agrobacterium tumefaciens C58 (atum0)
Bacteria
5301
37.7 %
(2000)
55.2 % 
(2925)
23.8 % 
(1263)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens C58 (Dupont) (atum1)
Bacteria
5402
37.3 %
(2016)
54.3 % 
(2934)
23.1 % 
(1246)
59.0 %
22 aa 
2831 aa 





Sinorhizobium meliloti 1021 (smel0)
Bacteria
6205
36.8 %
(2281)
55.1 % 
(3418)
23.8 % 
(1478)
62.2 %
31 aa 
2832 aa 





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
29.8 %
(410)
41.2 % 
(566)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia prowazekii Madrid E (rpro0)
Bacteria
834
43.8 %
(365)
57.8 % 
(482)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5116
34.0 %
(1738)
51.1 % 
(2612)
25.0 % 
(1279)
67.0 %
20 aa 
6889 aa 





Neisseria meningitidis MC58 (nmen0)
Bacteria
2025
35.9 %
(727)
48.6 % 
(985)
23.2 % 
(470)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
35.4 %
(730)
48.3 % 
(997)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Nitrosomonas europaea ATCC 19718 (neur0)
Bacteria
2461
36.4 %
(897)
53.6 % 
(1318)
25.8 % 
(636)
50.7 %
42 aa 
3064 aa 





Campylobacter jejuni  (cjej0)
Bacteria
1634
39.0 %
(637)
53.7 % 
(878)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
33.8 %
(529)
45.7 % 
(716)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
35.7 %
(533)
48.0 % 
(715)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Shewanella oneidensis MR-1 (sone0)
Bacteria
4778
30.3 %
(1450)
46.3 % 
(2212)
25.5 % 
(1220)
45.9 %
30 aa 
5020 aa 





Buchnera aphidicola Sg (baph0)
Bacteria
552
61.8 %
(341)
72.1 % 
(398)
17.0 % 
(94)
25.3 %
38 aa 
1413 aa 





Buchnera aphidicola (Baizongia pistaciae) (baph1)
Bacteria
507
63.7 %
(323)
74.0 % 
(375)
18.5 % 
(94)
25.3 %
38 aa 
1404 aa 





Buchnera sp. APS (buch0)
Bacteria
574
62.7 %
(360)
74.2 % 
(426)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli K-12 MG1655 (ecol0)
Bacteria
4391
38.3 %
(1680)
52.8 % 
(2320)
26.6 % 
(1167)
50.7 %
14 aa 
2383 aa 





Escherichia coli O157:H7  (ecol1)
Bacteria
5447
32.5 %
(1771)
46.1 % 
(2510)
24.0 % 
(1309)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 EDL933 (ecol2)
Bacteria
5349
32.8 %
(1753)
46.7 % 
(2499)
24.3 % 
(1298)
50.4 %
9 aa 
5188 aa 





Escherichia coli CFT073 (ecol3)
Bacteria
5379
33.1 %
(1783)
45.9 % 
(2470)
25.1 % 
(1351)
50.5 %
14 aa 
3216 aa 





Salmonella Typhi CT18 (styp0)
Bacteria
4767
34.0 %
(1623)
47.5 % 
(2263)
25.8 % 
(1230)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4553
37.6 %
(1711)
51.8 % 
(2359)
27.2 % 
(1239)
52.2 %
14 aa 
5559 aa 





Salmonella enterica subsp. enterica serovar Typhi Ty2 (styp2)
Bacteria
4323
36.5 %
(1578)
50.5 % 
(2183)
26.7 % 
(1153)
52.1 %
13 aa 
3624 aa 





Shigella flexneri 2a 301 (sfle0)
Bacteria
4180
35.2 %
(1473)
51.0 % 
(2133)
26.4 % 
(1103)
50.9 %
13 aa 
1522 aa 





Shigella flexneri 2a str. 2457T (sfle1)
Bacteria
4068
35.5 %
(1446)
50.7 % 
(2062)
25.6 % 
(1043)
50.9 %
14 aa 
1522 aa 





Wigglesworthia brevipalpis (wbre0)
Bacteria
611
60.1 %
(367)
70.2 % 
(429)
23.7 % 
(145)
22.5 %
38 aa 
1405 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4083
35.5 %
(1451)
50.3 % 
(2053)
25.8 % 
(1054)
47.6 %
14 aa 
3705 aa 





Yersinia pestis KIM (ypes1)
Bacteria
4090
35.1 %
(1436)
49.1 % 
(2009)
26.5 % 
(1084)
47.6 %
14 aa 
3710 aa 





Coxiella burnetii RSA 493 (cbur0)
Bacteria
2009
31.8 %
(639)
44.0 % 
(883)
23.6 % 
(475)
42.7 %
30 aa 
1734 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
45.9 %
(784)
58.9 % 
(1007)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Pasteurella multocida PM70 (pmul0)
Bacteria
2014
43.8 %
(883)
58.8 % 
(1185)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Pseudomonas aeruginosa PAO1 (paer0)
Bacteria
5565
37.2 %
(2070)
55.8 % 
(3106)
26.8 % 
(1491)
66.6 %
23 aa 
5627 aa 





Pseudomonas putida KT2440 (pput0)
Bacteria
5350
36.4 %
(1945)
53.2 % 
(2846)
25.3 % 
(1356)
61.5 %
23 aa 
8682 aa 





Pseudomonas syringae pv. tomato str. DC3000 (psyr0)
Bacteria
5608
33.7 %
(1891)
50.8 % 
(2850)
23.8 % 
(1337)
58.3 %
24 aa 
6274 aa 





Vibrio cholerae N16961 (vcho0)
Bacteria
3828
35.0 %
(1340)
50.1 % 
(1916)
27.4 % 
(1049)
47.5 %
26 aa 
4558 aa 





Vibrio parahaemolyticus RIMD 2210633 (vpar0)
Bacteria
4832
34.2 %
(1653)
49.8 % 
(2405)
27.2 % 
(1316)
45.4 %
14 aa 
6084 aa 





Vibrio vulnificus CMCP6 (vvul0)
Bacteria
4537
35.3 %
(1603)
52.2 % 
(2368)
25.6 % 
(1161)
46.7 %
20 aa 
5206 aa 





Xanthomonas axonopodis pv. citri 306 (xaxo0)
Bacteria
4427
34.6 %
(1532)
51.7 % 
(2287)
24.8 % 
(1100)
64.7 %
30 aa 
4753 aa 





Xanthomonas campestris pv. campestris ATCC 33913 (xcam0)
Bacteria
4181
35.5 %
(1485)
52.9 % 
(2213)
25.3 % 
(1056)
65.1 %
21 aa 
3961 aa 





Xylella fastidiosa 9a5c (xfas0)
Bacteria
2831
28.3 %
(800)
40.1 % 
(1136)
24.7 % 
(699)
52.6 %
30 aa 
3455 aa 





Xylella fastidiosa Temecula1 (xfas1)
Bacteria
2036
37.4 %
(761)
51.1 % 
(1040)
25.6 % 
(522)
51.8 %
30 aa 
3457 aa 





Leptospira interrogans serovar lai str. 56601 (lint0)
Bacteria
4727
21.6 %
(1019)
35.2 % 
(1665)
26.5 % 
(1255)
35.0 %
30 aa 
3141 aa 





Borrelia burgdorferi (bbur0)
Bacteria
1637
21.7 %
(356)
32.0 % 
(524)
28.0 % 
(459)
28.2 %
30 aa 
2166 aa 





Treponema pallidum (tpal0)
Bacteria
1031
35.6 %
(367)
48.5 % 
(500)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima (tmar0)
Bacteria
1846
41.5 %
(767)
55.9 % 
(1031)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Plasmodium falciparum 3D7 (pfal0)
Eukaryota
5268
23.7 %
(1248)
35.8 % 
(1887)
35.2 % 
(1853)
19.4 %
13 aa 
10589 aa 





Guillardia theta Nucleomorph (gthe0)
Eukaryota
485
34.2 %
(166)
43.3 % 
(210)
20.2 % 
(98)
26.4 %
56 aa 
2057 aa 





Leishmania major Friedlin (lmaj0)
Eukaryota
79
29.1 %
(23)
40.5 % 
(32)
21.5 % 
(17)
63.1 %
107 aa 
2241 aa 





Neurospora crassa (ncra0)
Eukaryota
10088
24.1 %
(2434)
36.3 % 
(3666)
20.4 % 
(2062)
56.0 %
9 aa 
10820 aa 





Saccharomyces cerevisiae (scer0)
Eukaryota
5866
33.9 %
(1990)
48.4 % 
(2839)
21.7 % 
(1270)
38.1 %
16 aa 
4910 aa 





Schizosaccharomyces pombe 972h- (spom0)
Eukaryota
5000
37.4 %
(1869)
52.1 % 
(2604)
20.7 % 
(1033)
36.1 %
14 aa 
4924 aa 





Drosophila melanogaster (dmel0)
Eukaryota
18289
38.9 %
(7107)
51.2 % 
(9371)
29.9 % 
(5475)
42.4 %
9 aa 
23054 aa 





Takifugu rubripes rubripes (trub0)
Eukaryota
37439
31.2 %
(11664)
40.3 % 
(15102)
16.5 % 
(6188)
45.3 %
4 aa 
5522 aa 





Danio rerio (drer0)
Eukaryota
26587
48.6 %
(12925)
61.7 % 
(16395)
24.1 % 
(6406)
52.4 %
22 aa 
5805 aa 





Homo sapiens (hsap0)
Eukaryota
32035
44.8 %
(14360)
55.8 % 
(17873)
26.0 % 
(8337)
40.9 %
19 aa 
10425 aa 





Homo sapiens cDNA (huge0)
Eukaryota
2031
40.4 %
(820)
60.3 % 
(1225)
22.0 % 
(447)
-
73 aa 
4594 aa 





Mus musculus (mmus0)
Eukaryota
32911
46.4 %
(15259)
58.0 % 
(19094)
26.5 % 
(8728)
41.7 %
7 aa 
7385 aa 





Rattus norvegicus (rnor0)
Eukaryota
28904
44.5 %
(12863)
55.5 % 
(16040)
26.9 % 
(7783)
42.0 %
5 aa 
7317 aa 





Ciona intestinalis (cint0)
Eukaryota
15852
37.4 %
(5923)
50.1 % 
(7949)
24.5 % 
(3888)
41.7 %
2 aa 
17232 aa 





Caenorhabditis briggsae (cbri0)
Eukaryota
14712
35.3 %
(5190)
47.2 % 
(6947)
36.2 % 
(5329)
37.4 %
22 aa 
7747 aa 





Caenorhabditis elegans (cele0)
Eukaryota
21588
28.3 %
(6106)
39.5 % 
(8532)
36.7 % 
(7916)
35.4 %
6 aa 
13100 aa 





Encephalitozoon cuniculi (ecun0)
Eukaryota
1996
30.5 %
(609)
44.3 % 
(885)
20.6 % 
(412)
47.3 %
52 aa 
3436 aa 





Oryza sativa (japonica cultivar-group) (osat0)
Eukaryota
14057
18.7 %
(2634)
28.6 % 
(4021)
22.4 % 
(3149)
43.7 %
13 aa 
2876 aa 





Arabidopsis thaliana (atha0)
Eukaryota
28581
33.3 %
(9513)
49.9 % 
(14272)
26.6 % 
(7590)
36.0 %
19 aa 
5155 aa 





Enterobacteria phage 186 (bp180)
Viruses
46
17.4 %
(8)
19.6 % 
(9)
13.0 % 
(6)
53.1 %
58 aa 
812 aa 





Bacteriophage A511 (bpa50)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
36.7 %
106 aa 
562 aa 





Bacteriophage Aeh1 (bpae0)
Viruses
331
10.0 %
(33)
14.5 % 
(48)
11.2 % 
(37)
0.0 %
28 aa 
1358 aa 





Burkholderia cepacia phage Bcep781 (bpbc0)
Viruses
61
4.9 %
(3)
9.8 % 
(6)
4.9 % 
(3)
63.3 %
38 aa 
873 aa 





Pseudomonas aeruginosa phage phi CTX Viruses. (bpct0)
Viruses
47
2.1 %
(1)
6.4 % 
(3)
12.8 % 
(6)
62.6 %
35 aa 
904 aa 





Bacteriophage phig1e (bpg10)
Viruses
50
0.0 %
(0)
12.0 % 
(6)
12.0 % 
(6)
42.7 %
49 aa 
1662 aa 





Halovirus HF2 (bphf0)
Viruses
114
4.4 %
(5)
7.9 % 
(9)
6.1 % 
(7)
55.8 %
29 aa 
1288 aa 





Haemophilus phage HP1 (bphp0)
Viruses
41
4.9 %
(2)
7.3 % 
(3)
12.2 % 
(5)
40.0 %
61 aa 
925 aa 





Haemophilus phage HP2 (bphp1)
Viruses
36
5.6 %
(2)
8.3 % 
(3)
13.9 % 
(5)
39.9 %
61 aa 
910 aa 





Bacteriophage K139 (bpk10)
Viruses
44
2.3 %
(1)
11.4 % 
(5)
6.8 % 
(3)
48.9 %
53 aa 
800 aa 





Bacteriophage L-413C (bpl40)
Viruses
40
5.0 %
(2)
7.5 % 
(3)
17.5 % 
(7)
52.1 %
56 aa 
913 aa 





Bacteriophage Mu (bpmu0)
Viruses
53
9.4 %
(5)
11.3 % 
(6)
11.3 % 
(6)
52.1 %
39 aa 
690 aa 





Bacteriophage P2 (bpp20)
Viruses
42
4.8 %
(2)
9.5 % 
(4)
14.3 % 
(6)
50.2 %
56 aa 
815 aa 





Bacteriophage P4 (bpp40)
Viruses
12
8.3 %
(1)
16.7 % 
(2)
0.0 % 
(0)
49.5 %
88 aa 
777 aa 





Pseudomonas aeruginosa phage PA01 (bppa0)
Viruses
34
11.8 %
(4)
14.7 % 
(5)
8.8 % 
(3)
-
23 aa 
745 aa 





Pseudomonas phage phiKZ (bpph0)
Viruses
306
2.3 %
(7)
7.8 % 
(24)
11.8 % 
(36)
36.8 %
63 aa 
2237 aa 





Virus PhiCh1 (bpph1)
Viruses
98
6.1 %
(6)
10.2 % 
(10)
5.1 % 
(5)
61.9 %
54 aa 
581 aa 





Enterobacteria phage RB69 (bprb0)
Viruses
256
14.1 %
(36)
20.3 % 
(52)
9.4 % 
(24)
-
19 aa 
1277 aa 





Enterobacteria phage RB49 (bprb1)
Viruses
272
11.0 %
(30)
16.9 % 
(46)
11.0 % 
(30)
-
32 aa 
1246 aa 





Haemophilus influenzae phage Rd (bprd0)
Viruses
47
6.4 %
(3)
10.6 % 
(5)
8.5 % 
(4)
-
38 aa 
731 aa 





Bacteriophage RM 378 (bprm0)
Viruses
146
4.1 %
(6)
11.6 % 
(17)
9.6 % 
(14)
42.5 %
27 aa 
1019 aa 





Enterobacteria phage T4 (bpt40)
Viruses
278
15.1 %
(42)
19.1 % 
(53)
10.4 % 
(29)
35.3 %
26 aa 
1289 aa 





Vibrio harveyi bacteriophage VHML (bpvh0)
Viruses
57
5.3 %
(3)
12.3 % 
(7)
7.0 % 
(4)
50.6 %
33 aa 
1023 aa 





Staphylococcus phage 44AHJD (bp440)
Viruses
21
0.0 %
(0)
4.8 % 
(1)
9.5 % 
(2)
29.6 %
55 aa 
755 aa 





Acyrthosiphon pisum bacteriophage APSE-1 (bpap0)
Viruses
54
7.4 %
(4)
9.3 % 
(5)
18.5 % 
(10)
43.9 %
73 aa 
993 aa 





Bacteriophage B103 (bpb11)
Viruses
17
11.8 %
(2)
17.6 % 
(3)
5.9 % 
(1)
37.7 %
100 aa 
860 aa 





Streptococcus phage Cp-1 (bpcp0)
Viruses
28
7.1 %
(2)
7.1 % 
(2)
14.3 % 
(4)
38.9 %
62 aa 
586 aa 





Enterobacteria phage epsilon15 (bpep0)
Viruses
49
4.1 %
(2)
10.2 % 
(5)
18.4 % 
(9)
50.8 %
35 aa 
1070 aa 





Bacillus phage GA-1 (bpga0)
Viruses
35
2.9 %
(1)
5.7 % 
(2)
22.9 % 
(8)
34.7 %
25 aa 
740 aa 





Pseudomonas phage gh-1 (bpgh0)
Viruses
42
19.0 %
(8)
26.2 % 
(11)
7.1 % 
(3)
57.4 %
25 aa 
1392 aa 





Bacteriophage H-19B (bph10)
Viruses
22
9.1 %
(2)
18.2 % 
(4)
13.6 % 
(3)
45.9 %
44 aa 
315 aa 





Mycoplasma virus P1 (bpp10)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





Bacteriophage P22 (bpp21)
Viruses
36
16.7 %
(6)
19.4 % 
(7)
5.6 % 
(2)
47.1 %
47 aa 
667 aa 





Pseudomonas aeruginosa phage PaP3 (bppa1)
Viruses
69
4.3 %
(3)
11.6 % 
(8)
11.6 % 
(8)
52.1 %
26 aa 
1056 aa 





Bacteriophage phiYeO3-12 (bpph2)
Viruses
59
18.6 %
(11)
22.0 % 
(13)
15.3 % 
(9)
50.6 %
25 aa 
1320 aa 





Yersinia pestis phage phiA1122 (bpphD)
Viruses
50
16.0 %
(8)
20.0 % 
(10)
10.0 % 
(5)
48.3 %
27 aa 
1318 aa 





Staphylococcus aureus phage phiP68 (bpphE)
Viruses
22
0.0 %
(0)
9.1 % 
(2)
9.1 % 
(2)
29.3 %
55 aa 
755 aa 





Bacillus phage PZA (bppz0)
Viruses
27
7.4 %
(2)
11.1 % 
(3)
11.1 % 
(3)
39.7 %
37 aa 
854 aa 





Roseophage SIO1 (bpsi0)
Viruses
34
0.0 %
(0)
0.0 % 
(0)
11.8 % 
(4)
46.2 %
77 aa 
1484 aa 





Bacteriophage SP6 (bpsp0)
Viruses
20
15.0 %
(3)
30.0 % 
(6)
5.0 % 
(1)
46.1 %
42 aa 
874 aa 





Salmonella typhimurium phage ST64B (bpst0)
Viruses
56
7.1 %
(4)
12.5 % 
(7)
8.9 % 
(5)
51.0 %
54 aa 
642 aa 





Salmonella typhimurium bacteriophage ST64T (bpst1)
Viruses
65
9.2 %
(6)
12.3 % 
(8)
10.8 % 
(7)
47.5 %
37 aa 
725 aa 





Bacteriophage T7 (bpt70)
Viruses
58
15.5 %
(9)
17.2 % 
(10)
12.1 % 
(7)
48.4 %
29 aa 
1318 aa 





Vibriophage VpV262 (bpvp0)
Viruses
67
1.5 %
(1)
7.5 % 
(5)
9.0 % 
(6)
49.5 %
46 aa 
1536 aa 





Bacteriophage T3 (bpt30)
Viruses
44
18.2 %
(8)
22.7 % 
(10)
15.9 % 
(7)
49.9 %
25 aa 
884 aa 





Mycoplasma virus P1 (bpp11)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





Cyanophage P60 (bpp60)
Viruses
80
11.2 %
(9)
16.2 % 
(13)
6.2 % 
(5)
53.2 %
40 aa 
680 aa 





Shigella flexneri bacteriophage V (bpsf1)
Viruses
53
9.4 %
(5)
15.1 % 
(8)
13.2 % 
(7)
50.8 %
56 aa 
611 aa 





Bacteriophage 933W (bp930)
Viruses
80
6.2 %
(5)
12.5 % 
(10)
12.5 % 
(10)
49.4 %
51 aa 
2806 aa 





Bacteriophage A118 (bpa10)
Viruses
72
2.8 %
(2)
11.1 % 
(8)
13.9 % 
(10)
36.1 %
21 aa 
1794 aa 





Bacteriophage B1 (bpb10)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
36.8 %
65 aa 
273 aa 





Enterobacteria phage BF23 (bpbf0)
Viruses
8
0.0 %
(0)
25.0 % 
(2)
12.5 % 
(1)
38.5 %
75 aa 
595 aa 





Lactococcus phage c2 (bpc20)
Viruses
39
0.0 %
(0)
5.1 % 
(2)
15.4 % 
(6)
36.3 %
22 aa 
706 aa 





Pseudomonas phage D3 (bpd30)
Viruses
94
6.4 %
(6)
9.6 % 
(9)
12.8 % 
(12)
57.8 %
32 aa 
909 aa 





Enterobacteria phage HK022 (bphk0)
Viruses
57
8.8 %
(5)
12.3 % 
(7)
10.5 % 
(6)
49.5 %
50 aa 
1183 aa 





Bacteriophage HK97 (bphk2)
Viruses
61
8.2 %
(5)
13.1 % 
(8)
11.5 % 
(7)
49.8 %
32 aa 
1296 aa 





Mycobacterium phage L5 (bpl50)
Viruses
85
7.1 %
(6)
14.1 % 
(12)
7.1 % 
(6)
62.3 %
37 aa 
837 aa 





Bacteriophage lambda (bpla0)
Viruses
66
16.7 %
(11)
22.7 % 
(15)
10.6 % 
(7)
49.9 %
28 aa 
1132 aa 





Bacteriophage N15 (bpn10)
Viruses
60
10.0 %
(6)
21.7 % 
(13)
6.7 % 
(4)
51.2 %
18 aa 
1324 aa 





Bacteriophage P27 (bpp22)
Viruses
58
8.6 %
(5)
17.2 % 
(10)
12.1 % 
(7)
49.4 %
51 aa 
649 aa 





Bacteriophage phi-105 (bpph3)
Viruses
51
5.9 %
(3)
15.7 % 
(8)
11.8 % 
(6)
42.7 %
56 aa 
1018 aa 





Bacteriophage phi-C31 (bpph4)
Viruses
55
5.5 %
(3)
14.5 % 
(8)
14.5 % 
(8)
63.6 %
41 aa 
729 aa 





Bacteriophage phiE125 (bpph6)
Viruses
71
2.8 %
(2)
15.5 % 
(11)
11.3 % 
(8)
61.2 %
43 aa 
1354 aa 





Bacteriophage phi-BT1 (bpphC)
Viruses
55
3.6 %
(2)
14.5 % 
(8)
16.4 % 
(9)
62.8 %
46 aa 
808 aa 





Methanobacterium phage psiM2 (bpps0)
Viruses
31
0.0 %
(0)
6.5 % 
(2)
6.5 % 
(2)
46.3 %
90 aa 
1186 aa 





Streptococcus thermophilus bacteriophage Sfi11 (bpsf0)
Viruses
25
0.0 %
(0)
4.0 % 
(1)
12.0 % 
(3)
38.6 %
53 aa 
1510 aa 





Bacteriophage sk1 (bpsk0)
Viruses
54
0.0 %
(0)
1.9 % 
(1)
11.1 % 
(6)
34.5 %
39 aa 
999 aa 





Bacteriophage SPP1 (bpsp2)
Viruses
106
2.8 %
(3)
6.6 % 
(7)
23.6 % 
(25)
43.7 %
51 aa 
846 aa 





Stx2 converting bacteriophage I (bpst7)
Viruses
165
3.0 %
(5)
7.3 % 
(12)
17.6 % 
(29)
49.4 %
33 aa 
2806 aa 





Bacteriophage bIL170 (bpbi0)
Viruses
64
0.0 %
(0)
4.7 % 
(3)
10.9 % 
(7)
34.3 %
33 aa 
916 aa 





Bacteriophage bIL285 (bpbi1)
Viruses
62
4.8 %
(3)
8.1 % 
(5)
9.7 % 
(6)
35.2 %
42 aa 
894 aa 





Bacteriophage bIL286 (bpbi2)
Viruses
61
4.9 %
(3)
11.5 % 
(7)
13.1 % 
(8)
35.3 %
32 aa 
1640 aa 





Bacteriophage bIL309 (bpbi3)
Viruses
56
3.6 %
(2)
10.7 % 
(6)
14.3 % 
(8)
35.7 %
40 aa 
1441 aa 





Bacteriophage bIL310 (bpbi4)
Viruses
29
0.0 %
(0)
13.8 % 
(4)
10.3 % 
(3)
35.9 %
28 aa 
542 aa 





Bacteriophage bIL311 (bpbi5)
Viruses
22
9.1 %
(2)
27.3 % 
(6)
9.1 % 
(2)
34.2 %
38 aa 
489 aa 





Bacteriophage bIL312 (bpbi6)
Viruses
27
3.7 %
(1)
11.1 % 
(3)
11.1 % 
(3)
33.0 %
46 aa 
480 aa 





Lactococcus phage BK5-T (bpbk0)
Viruses
63
6.3 %
(4)
9.5 % 
(6)
15.9 % 
(10)
35.0 %
42 aa 
1904 aa 





Mycobacteriophage Bxb1 (bpbx0)
Viruses
86
5.8 %
(5)
11.6 % 
(10)
12.8 % 
(11)
63.6 %
31 aa 
823 aa 





Mycobacteriophage D29 (bpd20)
Viruses
79
8.9 %
(7)
20.3 % 
(16)
10.1 % 
(8)
63.5 %
28 aa 
837 aa 





Bacteriophage HK620 (bphk1)
Viruses
58
8.6 %
(5)
13.8 % 
(8)
8.6 % 
(5)
46.7 %
27 aa 
722 aa 





Listeria phage 2389 (bpl20)
Viruses
57
3.5 %
(2)
10.5 % 
(6)
12.3 % 
(7)
34.7 %
48 aa 
1026 aa 





Lactobacillus casei bacteriophage A2 (bplc0)
Viruses
61
3.3 %
(2)
11.5 % 
(7)
8.2 % 
(5)
44.9 %
59 aa 
1621 aa 





Lactococcus phage P335 (bpp30)
Viruses
49
6.1 %
(3)
12.2 % 
(6)
10.2 % 
(5)
35.4 %
54 aa 
1711 aa 





Bacteriophage phi3626 (bpph5)
Viruses
50
8.0 %
(4)
20.0 % 
(10)
14.0 % 
(7)
28.4 %
39 aa 
983 aa 





Bacteriophage phi ETA (bpph7)
Viruses
66
6.1 %
(4)
13.6 % 
(9)
13.6 % 
(9)
35.4 %
48 aa 
989 aa 





Temperate phage PhiNIH1.1 (bpph8)
Viruses
55
3.6 %
(2)
10.9 % 
(6)
12.7 % 
(7)
38.6 %
49 aa 
1086 aa 





Staphylococcus aureus prophage phiPV83 (bpph9)
Viruses
65
6.2 %
(4)
12.3 % 
(8)
13.8 % 
(9)
33.5 %
46 aa 
1313 aa 





Staphylococcus aureus temperate phage phiSLT (bpphA)
Viruses
62
11.3 %
(7)
19.4 % 
(12)
14.5 % 
(9)
33.3 %
35 aa 
1374 aa 





Lactobacillus bacteriophage phi adh (bpphB)
Viruses
63
9.5 %
(6)
14.3 % 
(9)
12.7 % 
(8)
35.6 %
49 aa 
1487 aa 





Methanothermobacter wolfeii prophage psiM100 (bpps1)
Viruses
37
5.4 %
(2)
8.1 % 
(3)
10.8 % 
(4)
45.7 %
85 aa 
1157 aa 





Bacteriophage r1t (bpr10)
Viruses
50
6.0 %
(3)
12.0 % 
(6)
14.0 % 
(7)
35.5 %
54 aa 
667 aa 





Staphylococcus aureus bacteriophage PVL (bpsa0)
Viruses
62
6.5 %
(4)
12.9 % 
(8)
17.7 % 
(11)
33.6 %
43 aa 
759 aa 





Bacteriophage SPBc2 (bpsp1)
Viruses
185
8.1 %
(15)
18.4 % 
(34)
15.1 % 
(28)
34.6 %
21 aa 
2285 aa 





Streptococcus pneumoniae bacteriophage MM1 (bpsp3)
Viruses
53
7.5 %
(4)
11.3 % 
(6)
11.3 % 
(6)
38.4 %
57 aa 
1989 aa 





Streptococcus thermophilus bacteriophage 7201 (bpst2)
Viruses
46
6.5 %
(3)
15.2 % 
(7)
10.9 % 
(5)
38.7 %
47 aa 
1554 aa 





Streptococcus thermophilus bacteriophage DT1 (bpst3)
Viruses
47
4.3 %
(2)
14.9 % 
(7)
4.3 % 
(2)
39.1 %
36 aa 
1278 aa 





Streptococcus thermophilus temperate bacteriophage O1205 (bpst4)
Viruses
57
3.5 %
(2)
7.0 % 
(4)
8.8 % 
(5)
38.3 %
42 aa 
1517 aa 





Streptococcus thermophilus bacteriophage Sfi19 (bpst5)
Viruses
45
2.2 %
(1)
11.1 % 
(5)
8.9 % 
(4)
38.3 %
40 aa 
1626 aa 





Streptococcus thermophilus bacteriophage Sfi21 (bpst6)
Viruses
50
4.0 %
(2)
16.0 % 
(8)
12.0 % 
(6)
37.6 %
48 aa 
1560 aa 





Mycobacteriophage TM4 (bptm0)
Viruses
89
2.2 %
(2)
5.6 % 
(5)
12.4 % 
(11)
68.1 %
29 aa 
1229 aa 





Lactococcus lactis bacteriophage TP901-1 (bptp0)
Viruses
56
5.4 %
(3)
8.9 % 
(5)
7.1 % 
(4)
35.4 %
47 aa 
937 aa 





Bacteriophage Tuc2009 (bptu0)
Viruses
56
7.1 %
(4)
16.1 % 
(9)
8.9 % 
(5)
36.2 %
32 aa 
1025 aa 





Lactococcus lactis bacteriophage ul36 (bpul0)
Viruses
58
3.4 %
(2)
10.3 % 
(6)
13.8 % 
(8)
35.8 %
50 aa 
908 aa 





Bacteriophage VT2-Sa (bpvt0)
Viruses
82
7.3 %
(6)
13.4 % 
(11)
13.4 % 
(11)
49.9 %
42 aa 
2806 aa 





Enterobacteria phage PRD1 (bppr0)
Viruses
22
13.6 %
(3)
18.2 % 
(4)
36.4 % 
(8)
48.1 %
42 aa 
591 aa 







DATE April 7 2003

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome
Seq length-> Minimum and maximum length of orf






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.





Aeropyrum pernix K1 (aper0)
Archaea
2694
18.2 %
(490)
29.7 % 
(800)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Sulfolobus solfataricus P2 (ssol0)
Archaea
2977
27.4 %
(815)
45.8 % 
(1364)
23.8 % 
(710)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii 7 (stok0)
Archaea
2826
26.9 %
(760)
44.1 % 
(1247)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum IM2 (paer1)
Archaea
2605
23.7 %
(617)
40.2 % 
(1047)
25.8 % 
(673)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus DSM4304 (aful0)
Archaea
2407
31.8 %
(765)
50.9 % 
(1226)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Methanosarcina acetivorans C2A (mace0)
Archaea
4540
26.4 %
(1199)
46.7 % 
(2122)
27.7 % 
(1258)
42.7 %
41 aa 
4226 aa 





Methanosarcina mazei Goe1 (mmaz0)
Archaea
3371
27.8 %
(938)
49.2 % 
(1659)
24.1 % 
(811)
41.5 %
16 aa 
1898 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
27.8 %
(723)
43.9 % 
(1143)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Methanobacterium thermoautotrophicum Delta H (mthe0)
Archaea
1869
33.9 %
(634)
52.4 % 
(980)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanococcus jannaschii DSM2661 (mjan0)
Archaea
1770
30.8 %
(545)
50.3 % 
(890)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
27.6 %
(465)
48.6 % 
(820)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Pyrococcus abyssi Orsay (paby0)
Archaea
1765
34.8 %
(614)
53.9 % 
(951)
24.6 % 
(435)
44.7 %
18 aa 
2122 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
31.7 %
(654)
48.8 % 
(1007)
24.8 % 
(513)
40.8 %
21 aa 
1740 aa 





Pyrococcus horikoshii OT3 (phor0)
Archaea
2064
28.3 %
(585)
43.6 % 
(899)
28.1 % 
(579)
41.9 %
50 aa 
4436 aa 





Thermoplasma acidophilum DSM1728 (taci0)
Archaea
1478
36.9 %
(546)
54.5 % 
(806)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium GSS1 (tvol0)
Archaea
1526
36.7 %
(560)
53.7 % 
(820)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Corynebacterium efficiens YS-314 (ceff0)
Bacteria
3006
31.2 %
(937)
48.3 % 
(1453)
25.1 % 
(755)
63.0 %
33 aa 
3022 aa 





Corynebacterium glutamicum ATCC 13032 (cglu0)
Bacteria
3099
32.2 %
(998)
50.3 % 
(1558)
25.6 % 
(793)
53.8 %
33 aa 
2993 aa 





Mycobacterium leprae TN (mlep0)
Bacteria
1605
40.4 %
(649)
55.4 % 
(889)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium tuberculosis H37Rv (mtub0)
Bacteria
3869
32.6 %
(1260)
50.0 % 
(1935)
22.1 % 
(856)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
29.8 %
(1248)
45.6 % 
(1909)
21.3 % 
(890)
65.6 %
30 aa 
4151 aa 





Streptomyces coelicolor A3(2) (scoe0)
Bacteria
7897
28.3 %
(2233)
48.4 % 
(3823)
22.5 % 
(1776)
72.0 %
19 aa 
7463 aa 





Bifidobacterium longum NCC2705 (blon0)
Bacteria
1729
40.0 %
(691)
57.0 % 
(986)
24.9 % 
(431)
60.1 %
15 aa 
3172 aa 





Aquifex aeolicus VF5 (aaeo0)
Bacteria
1553
41.8 %
(649)
59.9 % 
(930)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Chlamydia muridarum Nigg (cmur0)
Bacteria
916
37.9 %
(347)
56.9 % 
(521)
27.0 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis D/UW-3/CX (ctra0)
Bacteria
894
38.7 %
(346)
56.0 % 
(501)
27.3 % 
(244)
41.3 %
45 aa 
1786 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1109
31.5 %
(349)
47.6 % 
(528)
31.4 % 
(348)
40.6 %
30 aa 
1826 aa 





Chlamydophila pneumoniae CWL029 (cpne1)
Bacteria
1052
33.4 %
(351)
50.6 % 
(532)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
32.9 %
(352)
50.0 % 
(534)
31.2 % 
(334)
40.6 %
40 aa 
1826 aa 





Chlorobium tepidum TLS (ctep0)
Bacteria
2252
34.6 %
(780)
51.2 % 
(1152)
21.4 % 
(483)
56.5 %
30 aa 
1510 aa 





Synechocystis sp. PCC 6803 (syne0)
Bacteria
3167
34.0 %
(1076)
51.1 % 
(1618)
26.6 % 
(843)
47.7 %
29 aa 
4199 aa 





Thermosynechococcus elongatus BP-1 (telo0)
Bacteria
2475
34.2 %
(846)
51.2 % 
(1267)
17.1 % 
(423)
53.9 %
29 aa 
1706 aa 





Nostoc sp. PCC 7120 (anab0)
Bacteria
6129
28.7 %
(1759)
46.1 % 
(2828)
25.5 % 
(1564)
41.3 %
17 aa 
4936 aa 





Deinococcus radiodurans R1 (drad0)
Bacteria
3102
31.2 %
(969)
48.5 % 
(1503)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Bacillus halodurans C-125 (bhal0)
Bacteria
4066
34.9 %
(1420)
50.9 % 
(2071)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus subtilis 168 (bsub0)
Bacteria
4100
35.5 %
(1455)
52.0 % 
(2133)
29.3 % 
(1200)
43.5 %
20 aa 
4930 aa 





Oceanobacillus iheyensis HTE831 (oihe0)
Bacteria
3496
36.2 %
(1266)
52.9 % 
(1851)
32.2 % 
(1127)
35.7 %
24 aa 
2373 aa 





Listeria innocua Clip11262 (linn0)
Bacteria
3043
36.0 %
(1094)
53.6 % 
(1630)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
39.3 %
(1119)
56.7 % 
(1614)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Staphylococcus aureus Mu50 (saur0)
Bacteria
2748
36.6 %
(1005)
51.9 % 
(1426)
27.6 % 
(758)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus N315 (saur1)
Bacteria
2624
38.6 %
(1012)
53.9 % 
(1414)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus MW2 (saur2)
Bacteria
2632
37.2 %
(980)
52.6 % 
(1384)
28.4 % 
(747)
32.8 %
18 aa 
9904 aa 





Staphylococcus epidermidis ATCC 12228 (sepi0)
Bacteria
2419
36.5 %
(883)
52.1 % 
(1261)
26.8 % 
(649)
32.1 %
25 aa 
9439 aa 





Clostridium acetobutylicum ATCC824 (cace0)
Bacteria
3848
34.5 %
(1327)
53.0 % 
(2039)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium perfringens 13 (cper0)
Bacteria
2723
36.3 %
(988)
53.3 % 
(1450)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Thermoanaerobacter tengcongensis MB4T (tten0)
Bacteria
2588
37.3 %
(965)
54.0 % 
(1397)
27.6 % 
(715)
37.6 %
37 aa 
2862 aa 





Lactococcus lactis IL1403 (llac0)
Bacteria
2266
36.7 %
(832)
54.3 % 
(1231)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus agalactiae (saga0)
Bacteria
2124
36.1 %
(767)
53.4 % 
(1135)
26.8 % 
(570)
35.6 %
23 aa 
2274 aa 





Streptococcus agalactiae NEM316 (saga1)
Bacteria
2094
37.2 %
(780)
55.2 % 
(1156)
28.8 % 
(603)
35.6 %
30 aa 
2066 aa 





Streptococcus mutans UA159 (smut0)
Bacteria
1960
38.1 %
(746)
56.0 % 
(1097)
27.3 % 
(535)
36.8 %
25 aa 
2724 aa 





Streptococcus pneumoniae R6 (spne0)
Bacteria
2094
36.3 %
(761)
52.1 % 
(1090)
25.4 % 
(531)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae TIGR4 (spne1)
Bacteria
2043
37.9 %
(774)
54.1 % 
(1106)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes SF370 (spyo0)
Bacteria
1696
37.9 %
(642)
55.3 % 
(938)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
35.6 %
(657)
52.8 % 
(974)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Streptococcus pyogenes MGAS315 (spyo2)
Bacteria
1865
35.1 %
(655)
52.0 % 
(969)
23.0 % 
(429)
38.6 %
38 aa 
1622 aa 





Mycoplasma genitalium G37 (mgen0)
Bacteria
480
44.2 %
(212)
63.8 % 
(306)
23.1 % 
(111)
31.7 %
37 aa 
1805 aa 





Mycoplasma penetrans (mpen0)
Bacteria
1037
31.7 %
(329)
50.1 % 
(520)
27.9 % 
(289)
25.7 %
47 aa 
3317 aa 





Mycoplasma pneumoniae M129 (mpne0)
Bacteria
688
33.9 %
(233)
51.0 % 
(351)
22.8 % 
(157)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis UAB CTIP (mpul0)
Bacteria
782
35.7 %
(279)
55.5 % 
(434)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Ureaplasma urealyticum (uure0)
Bacteria
611
35.0 %
(214)
53.4 % 
(326)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Fusobacterium nucleatum ATCC 25586 (fnuc0)
Bacteria
2067
33.4 %
(691)
50.1 % 
(1035)
25.8 % 
(534)
27.2 %
20 aa 
3165 aa 





Caulobacter crescentus (ccre0)
Bacteria
3737
34.5 %
(1291)
52.7 % 
(1971)
22.8 % 
(853)
67.2 %
30 aa 
2479 aa 





Bradyrhizobium japonicum (bjap0)
Bacteria
8317
33.1 %
(2752)
51.5 % 
(4284)
24.7 % 
(2053)
64.1 %
30 aa 
5685 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
37.1 %
(1188)
53.9 % 
(1725)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Brucella suis 1330 (bsui0)
Bacteria
3264
34.5 %
(1125)
49.8 % 
(1624)
23.5 % 
(767)
57.3 %
29 aa 
3420 aa 





Mesorhizobium loti MAFF303099 (mlot0)
Bacteria
7281
32.2 %
(2347)
50.7 % 
(3689)
22.6 % 
(1649)
62.5 %
30 aa 
3930 aa 





Agrobacterium tumefaciens C58 (atum0)
Bacteria
5299
36.3 %
(1922)
55.1 % 
(2920)
23.8 % 
(1262)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens C58 (Dupont) (atum1)
Bacteria
5402
35.9 %
(1937)
54.2 % 
(2929)
23.0 % 
(1245)
59.0 %
22 aa 
2831 aa 





Sinorhizobium meliloti 1021 (smel0)
Bacteria
6205
35.5 %
(2201)
54.6 % 
(3385)
23.8 % 
(1477)
62.2 %
31 aa 
2832 aa 





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
28.8 %
(396)
42.9 % 
(590)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia prowazekii Madrid E (rpro0)
Bacteria
834
42.3 %
(353)
59.8 % 
(499)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5116
32.8 %
(1680)
50.9 % 
(2604)
25.0 % 
(1279)
67.0 %
20 aa 
6889 aa 





Neisseria meningitidis MC58 (nmen0)
Bacteria
2025
34.7 %
(703)
50.0 % 
(1013)
23.2 % 
(470)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
34.1 %
(704)
49.8 % 
(1029)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Campylobacter jejuni  (cjej0)
Bacteria
1634
38.2 %
(624)
56.2 % 
(918)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
33.0 %
(516)
49.7 % 
(778)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
34.9 %
(521)
52.4 % 
(781)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Shewanella oneidensis MR-1 (sone0)
Bacteria
4778
29.3 %
(1402)
46.4 % 
(2217)
25.5 % 
(1219)
45.9 %
30 aa 
5020 aa 





Buchnera aphidicola Sg (baph0)
Bacteria
552
60.0 %
(331)
72.1 % 
(398)
17.0 % 
(94)
25.3 %
38 aa 
1413 aa 





Buchnera aphidicola (Baizongia pistaciae) (baph1)
Bacteria
504
62.3 %
(314)
73.8 % 
(372)
18.5 % 
(93)
25.3 %
38 aa 
1404 aa 





Buchnera sp. APS (buch0)
Bacteria
574
61.1 %
(351)
73.9 % 
(424)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli K-12 (ecol0)
Bacteria
4289
37.7 %
(1615)
54.3 % 
(2329)
26.5 % 
(1137)
50.8 %
14 aa 
2383 aa 





Escherichia coli O157:H7  (ecol1)
Bacteria
5361
31.8 %
(1706)
48.1 % 
(2577)
24.0 % 
(1287)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 EDL933 (ecol2)
Bacteria
5349
31.8 %
(1699)
48.4 % 
(2589)
24.3 % 
(1298)
50.4 %
9 aa 
5188 aa 





Escherichia coli CFT073 (ecol3)
Bacteria
5379
32.2 %
(1730)
46.4 % 
(2494)
25.1 % 
(1349)
50.5 %
14 aa 
3216 aa 





Salmonella Typhi CT18 (styp0)
Bacteria
4767
33.0 %
(1571)
48.3 % 
(2301)
25.8 % 
(1229)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4553
36.4 %
(1657)
52.3 % 
(2383)
27.2 % 
(1238)
52.2 %
14 aa 
5559 aa 





Shigella flexneri 2a 301 (sfle0)
Bacteria
4180
34.2 %
(1428)
49.6 % 
(2075)
26.4 % 
(1103)
50.9 %
13 aa 
1522 aa 





Wigglesworthia brevipalpis (wbre0)
Bacteria
611
57.6 %
(352)
68.7 % 
(420)
23.7 % 
(145)
22.5 %
38 aa 
1405 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4083
34.3 %
(1401)
49.6 % 
(2024)
25.8 % 
(1053)
47.6 %
14 aa 
3705 aa 





Yersinia pestis KIM (ypes1)
Bacteria
4090
33.9 %
(1386)
48.9 % 
(1998)
26.5 % 
(1083)
47.6 %
14 aa 
3710 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
44.2 %
(755)
59.5 % 
(1017)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Pasteurella multocida PM70 (pmul0)
Bacteria
2014
42.6 %
(858)
60.0 % 
(1208)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Pseudomonas aeruginosa PAO1 (paer0)
Bacteria
5565
35.7 %
(1987)
55.3 % 
(3080)
26.8 % 
(1491)
66.6 %
23 aa 
5627 aa 





Pseudomonas putida KT2440 (pput0)
Bacteria
5350
35.0 %
(1875)
53.8 % 
(2879)
25.3 % 
(1356)
61.5 %
23 aa 
8682 aa 





Vibrio cholerae N16961 (vcho0)
Bacteria
3828
34.1 %
(1305)
51.0 % 
(1952)
27.4 % 
(1047)
47.5 %
26 aa 
4558 aa 





Vibrio vulnificus CMCP6 (vvul0)
Bacteria
4537
34.3 %
(1558)
52.9 % 
(2398)
25.6 % 
(1161)
46.7 %
20 aa 
5206 aa 





Xanthomonas axonopodis pv. citri 306 (xaxo0)
Bacteria
4312
33.7 %
(1455)
51.9 % 
(2239)
25.0 % 
(1077)
64.8 %
30 aa 
4753 aa 





Xanthomonas campestris pv. campestris ATCC 33913 (xcam0)
Bacteria
4181
33.9 %
(1419)
53.0 % 
(2216)
25.3 % 
(1056)
65.1 %
21 aa 
3961 aa 





Xylella fastidiosa (xfas0)
Bacteria
2831
27.3 %
(772)
40.3 % 
(1141)
24.7 % 
(698)
52.6 %
30 aa 
3455 aa 





Leptospira interrogans serovar lai str. 56601 (lint0)
Bacteria
4727
20.8 %
(985)
37.0 % 
(1751)
26.5 % 
(1254)
35.0 %
30 aa 
3141 aa 





Borrelia burgdorferi (bbur0)
Bacteria
1637
21.4 %
(350)
34.7 % 
(568)
28.0 % 
(459)
28.2 %
30 aa 
2166 aa 





Treponema pallidum (tpal0)
Bacteria
1031
34.7 %
(358)
51.0 % 
(526)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima (tmar0)
Bacteria
1846
39.9 %
(737)
58.7 % 
(1083)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Plasmodium falciparum (pfal0)
Eukaryota
422
25.1 %
(106)
38.2 % 
(161)
46.2 % 
(195)
19.8 %
54 aa 
4981 aa 





Guillardia theta Nucleomorph (gthe0)
Eukaryota
485
33.6 %
(163)
46.6 % 
(226)
20.2 % 
(98)
26.4 %
56 aa 
2057 aa 





Leishmania major Friedlin (lmaj0)
Eukaryota
79
29.1 %
(23)
41.8 % 
(33)
21.5 % 
(17)
63.1 %
107 aa 
2241 aa 





Saccharomyces cerevisiae S288C (scer0)
Eukaryota
6344
30.7 %
(1948)
51.3 % 
(3252)
24.6 % 
(1562)
38.1 %
24 aa 
4910 aa 





Schizosaccharomyces pombe 972h- (spom0)
Eukaryota
5001
36.6 %
(1829)
59.9 % 
(2995)
20.7 % 
(1033)
36.1 %
14 aa 
4924 aa 





Drosophila melanogaster (dmel0)
Eukaryota
14348
35.3 %
(5060)
52.4 % 
(7520)
28.3 % 
(4065)
42.4 %
1 aa 
8805 aa 





Takifugu rubripes rubripes (trub0)
Eukaryota
38626
30.9 %
(11918)
41.9 % 
(16197)
16.7 % 
(6444)
45.3 %
4 aa 
5522 aa 





Homo sapiens cDNA (huge0)
Eukaryota
2002
39.4 %
(788)
72.0 % 
(1442)
22.2 % 
(445)
49.1 %
73 aa 
3434 aa 





Mus musculus cDNA (mmus0)
Eukaryota
29941
36.9 %
(11044)
52.3 % 
(15646)
25.4 % 
(7611)
49.1 %
5 aa 
2671 aa 





Ciona intestinalis (cint0)
Eukaryota
15852
36.8 %
(5827)
53.9 % 
(8544)
24.5 % 
(3888)
35.7 %
2 aa 
17232 aa 





Caenorhabditis elegans (cele0)
Eukaryota
20216
27.2 %
(5508)
44.8 % 
(9049)
37.2 % 
(7514)
35.4 %
8 aa 
13055 aa 





Encephalitozoon cuniculi (ecun0)
Eukaryota
1996
29.9 %
(597)
50.9 % 
(1015)
20.7 % 
(413)
47.3 %
52 aa 
3436 aa 





Oryza sativa (japonica cultivar-group) (osat0)
Eukaryota
13030
18.6 %
(2425)
31.3 % 
(4075)
22.5 % 
(2936)
43.5 %
13 aa 
2876 aa 





Arabidopsis thaliana (atha0)
Eukaryota
25749
33.0 %
(8486)
54.6 % 
(14051)
27.1 % 
(6979)
36.0 %
19 aa 
5138 aa 





Enterobacteria phage 186 (bp180)
Viruses
46
17.4 %
(8)
26.1 % 
(12)
13.0 % 
(6)
53.1 %
58 aa 
812 aa 





Bacteriophage A511 (bpa50)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
36.7 %
106 aa 
562 aa 





Burkholderia cepacia phage Bcep781 (bpbc0)
Viruses
61
4.9 %
(3)
13.1 % 
(8)
4.9 % 
(3)
63.3 %
38 aa 
873 aa 





Pseudomonas aeruginosa phage phi CTX Viruses. (bpct0)
Viruses
47
2.1 %
(1)
14.9 % 
(7)
12.8 % 
(6)
62.6 %
35 aa 
904 aa 





Bacteriophage phig1e (bpg10)
Viruses
50
0.0 %
(0)
18.0 % 
(9)
12.0 % 
(6)
41.7 %
49 aa 
1662 aa 





Halovirus HF2 (bphf0)
Viruses
114
4.4 %
(5)
8.8 % 
(10)
6.1 % 
(7)
55.8 %
29 aa 
1288 aa 





Haemophilus phage HP1 (bphp0)
Viruses
41
4.9 %
(2)
12.2 % 
(5)
12.2 % 
(5)
40.0 %
61 aa 
925 aa 





Haemophilus phage HP2 (bphp1)
Viruses
36
5.6 %
(2)
13.9 % 
(5)
13.9 % 
(5)
39.9 %
61 aa 
910 aa 





Bacteriophage K139 (bpk10)
Viruses
44
2.3 %
(1)
13.6 % 
(6)
6.8 % 
(3)
48.9 %
53 aa 
800 aa 





Bacteriophage Mu (bpmu0)
Viruses
53
9.4 %
(5)
17.0 % 
(9)
11.3 % 
(6)
52.1 %
39 aa 
690 aa 





Bacteriophage P2 (bpp20)
Viruses
42
4.8 %
(2)
16.7 % 
(7)
14.3 % 
(6)
50.2 %
56 aa 
815 aa 





Bacteriophage P4 (bpp40)
Viruses
12
8.3 %
(1)
25.0 % 
(3)
0.0 % 
(0)
49.5 %
88 aa 
777 aa 





Pseudomonas aeruginosa phage PA01 (bppa0)
Viruses
34
11.8 %
(4)
11.8 % 
(4)
8.8 % 
(3)
0.0 %
23 aa 
745 aa 





Pseudomonas phage phiKZ (bpph0)
Viruses
306
2.3 %
(7)
17.6 % 
(54)
11.8 % 
(36)
36.8 %
63 aa 
2237 aa 





Virus PhiCh1 (bpph1)
Viruses
98
6.1 %
(6)
10.2 % 
(10)
5.1 % 
(5)
61.9 %
54 aa 
581 aa 





Enterobacteria phage RB69 (bprb0)
Viruses
256
13.7 %
(35)
23.4 % 
(60)
9.4 % 
(24)
0.0 %
19 aa 
1277 aa 





Haemophilus influenzae phage Rd (bprd0)
Viruses
47
6.4 %
(3)
17.0 % 
(8)
8.5 % 
(4)
0.0 %
38 aa 
731 aa 





Enterobacteria phage T4 (bpt40)
Viruses
274
14.6 %
(40)
23.7 % 
(65)
10.2 % 
(28)
35.3 %
26 aa 
1289 aa 





Vibrio harveyi bacteriophage VHML (bpvh0)
Viruses
57
5.3 %
(3)
15.8 % 
(9)
7.0 % 
(4)
50.6 %
33 aa 
1023 aa 





Acyrthosiphon pisum bacteriophage APSE-1 (bpap0)
Viruses
54
7.4 %
(4)
20.4 % 
(11)
18.5 % 
(10)
43.9 %
73 aa 
993 aa 





Bacteriophage B103 (bpb11)
Viruses
17
11.8 %
(2)
23.5 % 
(4)
5.9 % 
(1)
37.7 %
100 aa 
860 aa 





Streptococcus phage Cp-1 (bpcp0)
Viruses
28
7.1 %
(2)
17.9 % 
(5)
14.3 % 
(4)
38.8 %
62 aa 
586 aa 





Bacillus phage GA-1 (bpga0)
Viruses
35
2.9 %
(1)
11.4 % 
(4)
22.9 % 
(8)
34.7 %
25 aa 
740 aa 





Bacteriophage H-19B (bph10)
Viruses
22
9.1 %
(2)
18.2 % 
(4)
13.6 % 
(3)
45.9 %
44 aa 
315 aa 





Mycoplasma virus P1 (bpp10)
Viruses
11
0.0 %
(0)
45.5 % 
(5)
0.0 % 
(0)
26.8 %
80 aa 
694 aa 





Bacteriophage P22 (bpp21)
Viruses
36
16.7 %
(6)
22.2 % 
(8)
5.6 % 
(2)
47.1 %
47 aa 
667 aa 





Pseudomonas aeruginosa phage PaP3 (bppa1)
Viruses
69
4.3 %
(3)
11.6 % 
(8)
11.6 % 
(8)
52.1 %
26 aa 
1056 aa 





Bacteriophage phiYeO3-12 (bpph2)
Viruses
59
18.6 %
(11)
30.5 % 
(18)
15.3 % 
(9)
50.6 %
25 aa 
1320 aa 





Bacillus phage PZA (bppz0)
Viruses
27
7.4 %
(2)
18.5 % 
(5)
11.1 % 
(3)
39.7 %
37 aa 
854 aa 





Bacteriophage SP6 (bpsp0)
Viruses
20
15.0 %
(3)
30.0 % 
(6)
5.0 % 
(1)
46.1 %
42 aa 
874 aa 





Salmonella typhimurium phage ST64B (bpst0)
Viruses
56
7.1 %
(4)
16.1 % 
(9)
8.9 % 
(5)
51.0 %
54 aa 
642 aa 





Salmonella typhimurium bacteriophage ST64T (bpst1)
Viruses
65
9.2 %
(6)
15.4 % 
(10)
10.8 % 
(7)
47.5 %
37 aa 
725 aa 





Bacteriophage T7 (bpt70)
Viruses
58
15.5 %
(9)
20.7 % 
(12)
12.1 % 
(7)
48.4 %
29 aa 
1318 aa 





Vibriophage VpV262 (bpvp0)
Viruses
67
1.5 %
(1)
11.9 % 
(8)
9.0 % 
(6)
49.5 %
46 aa 
1536 aa 





Bacteriophage T3 (bpt30)
Viruses
44
18.2 %
(8)
29.5 % 
(13)
15.9 % 
(7)
49.9 %
25 aa 
884 aa 





Bacteriophage A118 (bpa10)
Viruses
72
2.8 %
(2)
12.5 % 
(9)
13.9 % 
(10)
36.1 %
21 aa 
1794 aa 





Bacteriophage B1 (bpb10)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
36.8 %
65 aa 
273 aa 





Enterobacteria phage BF23 (bpbf0)
Viruses
8
0.0 %
(0)
12.5 % 
(1)
12.5 % 
(1)
38.3 %
75 aa 
595 aa 





Lactococcus phage c2 (bpc20)
Viruses
39
0.0 %
(0)
7.7 % 
(3)
15.4 % 
(6)
36.3 %
22 aa 
706 aa 





Bacteriophage lambda (bpla0)
Viruses
66
16.7 %
(11)
25.8 % 
(17)
10.6 % 
(7)
49.9 %
28 aa 
1132 aa 





Methanobacterium phage psiM2 (bpps0)
Viruses
31
0.0 %
(0)
16.1 % 
(5)
6.5 % 
(2)
46.3 %
90 aa 
1186 aa 





Streptococcus thermophilus bacteriophage Sfi11 (bpsf0)
Viruses
25
0.0 %
(0)
16.0 % 
(4)
12.0 % 
(3)
38.6 %
53 aa 
1510 aa 





Bacteriophage sk1 (bpsk0)
Viruses
54
0.0 %
(0)
11.1 % 
(6)
11.1 % 
(6)
34.5 %
39 aa 
999 aa 








DATE October 29 2002

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C       -> Guanine and Cytosine content of genome 
Seq length-> Minimum and maximum length of orf 






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C content
Seq length




min.
max.






Aeropyrum pernix K1 (aper0)
Archaea
2694
17.6 %
(474)
28.7 % 
(772)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Sulfolobus solfataricus P2 (ssol0)
Archaea
2977
26.8 %
(797)
45.2 % 
(1346)
23.8 % 
(710)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii 7 (stok0)
Archaea
2826
26.2 %
(739)
43.7 % 
(1234)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum IM2 (paer1)
Archaea
2605
23.1 %
(602)
39.7 % 
(1034)
25.8 % 
(673)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus DSM4304 (aful0)
Archaea
2407
31.2 %
(751)
50.4 % 
(1212)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
26.9 %
(701)
43.3 % 
(1129)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Methanobacterium thermoautotrophicum Delta H (mthe0)
Archaea
1869
33.0 %
(616)
52.4 % 
(980)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanococcus jannaschii DSM2661 (mjan0)
Archaea
1770
29.5 %
(523)
50.2 % 
(889)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanosarcina acetivorans C2A (mace0)
Archaea
4540
24.9 %
(1132)
45.6 % 
(2069)
27.7 % 
(1258)
42.7 %
41 aa 
4226 aa 





Methanosarcina mazei Goe1 (mmaz0)
Archaea
3371
26.6 %
(896)
48.3 % 
(1628)
24.1 % 
(811)
41.5 %
16 aa 
1898 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
26.6 %
(448)
47.6 % 
(803)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Pyrococcus abyssi Orsay (paby0)
Archaea
1765
34.0 %
(600)
53.3 % 
(941)
24.6 % 
(435)
44.7 %
18 aa 
2122 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
30.9 %
(639)
49.3 % 
(1019)
24.8 % 
(513)
40.8 %
21 aa 
1740 aa 





Pyrococcus horikoshii OT3 (phor0)
Archaea
2064
27.5 %
(567)
43.5 % 
(898)
28.1 % 
(579)
41.9 %
50 aa 
4436 aa 





Thermoplasma acidophilum IM2 (taci0)
Archaea
1478
36.5 %
(540)
55.3 % 
(817)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium GSS1 (tvol0)
Archaea
1526
36.2 %
(553)
54.1 % 
(826)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Corynebacterium glutamicum ATCC 13032 (cglu0)
Bacteria
3099
31.1 %
(965)
49.6 % 
(1538)
25.6 % 
(793)
53.8 %
33 aa 
2993 aa 





Mycobacterium leprae TN (mlep0)
Bacteria
1605
39.4 %
(633)
54.4 % 
(873)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium tuberculosis H37Rv (mtub0)
Bacteria
3869
31.6 %
(1224)
49.2 % 
(1904)
22.1 % 
(856)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
28.9 %
(1210)
44.9 % 
(1880)
21.3 % 
(890)
65.6 %
30 aa 
4151 aa 





Streptomyces coelicolor A3(2) (scoe0)
Bacteria
7897
27.4 %
(2161)
47.3 % 
(3733)
22.5 % 
(1776)
72.0 %
19 aa 
7463 aa 





Bifidobacterium longum NCC2705 (blon0)
Bacteria
1729
38.8 %
(671)
55.9 % 
(967)
24.9 % 
(431)
60.1 %
15 aa 
3172 aa 





Aquifex aeolicus VF5 (aaeo0)
Bacteria
1553
40.1 %
(622)
58.9 % 
(915)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Chlamydia muridarum Nigg (cmur0)
Bacteria
916
36.6 %
(335)
56.6 % 
(518)
27.0 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis D/UW-3/CX (ctra0)
Bacteria
894
37.5 %
(335)
57.5 % 
(514)
27.3 % 
(244)
41.3 %
45 aa 
1786 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1109
30.2 %
(335)
47.4 % 
(526)
31.4 % 
(348)
40.6 %
30 aa 
1826 aa 





Chlamydophila pneumoniae CWL029 (cpne1)
Bacteria
1052
32.0 %
(337)
50.0 % 
(526)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
31.6 %
(338)
49.4 % 
(528)
31.2 % 
(334)
40.6 %
40 aa 
1826 aa 





Chlorobium tepidum TLS (ctep0)
Bacteria
2252
33.4 %
(753)
49.6 % 
(1118)
21.4 % 
(483)
56.5 %
30 aa 
1510 aa 





Synechocystis sp. PCC 6803 (syne0)
Bacteria
3167
33.0 %
(1045)
50.6 % 
(1604)
26.6 % 
(843)
47.7 %
29 aa 
4199 aa 





Thermosynechococcus elongatus BP-1 (telo0)
Bacteria
2475
33.3 %
(824)
50.6 % 
(1252)
17.1 % 
(423)
53.9 %
29 aa 
1706 aa 





Nostoc sp. PCC 7120 (anab0)
Bacteria
6129
27.9 %
(1710)
44.9 % 
(2753)
25.5 % 
(1564)
41.3 %
17 aa 
4936 aa 





Deinococcus radiodurans R1 (drad0)
Bacteria
3102
30.1 %
(935)
47.8 % 
(1483)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Bacillus halodurans C-125 (bhal0)
Bacteria
4066
33.6 %
(1368)
51.1 % 
(2078)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus subtilis 168 (bsub0)
Bacteria
4100
34.2 %
(1402)
51.4 % 
(2107)
29.3 % 
(1200)
43.5 %
20 aa 
4930 aa 





Listeria innocua Clip11262 (linn0)
Bacteria
3043
34.6 %
(1052)
53.3 % 
(1622)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
37.9 %
(1079)
56.4 % 
(1605)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Oceanobacillus iheyensis HTE831 (oihe0)
Bacteria
3496
34.9 %
(1221)
52.5 % 
(1834)
32.2 % 
(1127)
35.7 %
24 aa 
2373 aa 





Staphylococcus aureus Mu50 (saur0)
Bacteria
2748
35.3 %
(970)
51.1 % 
(1404)
27.6 % 
(758)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus N315 (saur1)
Bacteria
2624
37.2 %
(975)
53.0 % 
(1391)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus MW2 (saur2)
Bacteria
2632
35.9 %
(945)
51.7 % 
(1361)
28.4 % 
(747)
32.8 %
18 aa 
9904 aa 





Clostridium acetobutylicum ATCC824 (cace0)
Bacteria
3848
33.5 %
(1288)
52.4 % 
(2018)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium perfringens 13 (cper0)
Bacteria
2723
35.0 %
(953)
52.3 % 
(1423)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Thermoanaerobacter tengcongensis MB4T (tten0)
Bacteria
2588
36.2 %
(937)
53.4 % 
(1382)
27.6 % 
(715)
37.6 %
37 aa 
2862 aa 





Lactococcus lactis IL1403 (llac0)
Bacteria
2266
35.6 %
(806)
53.4 % 
(1210)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus agalactiae (saga0)
Bacteria
2124
34.8 %
(740)
53.1 % 
(1127)
26.8 % 
(570)
35.6 %
23 aa 
2274 aa 





Streptococcus pneumoniae R6 (spne0)
Bacteria
2094
35.1 %
(736)
51.9 % 
(1087)
25.4 % 
(531)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae TIGR4 (spne1)
Bacteria
2043
36.8 %
(751)
53.9 % 
(1101)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes SF370 (spyo0)
Bacteria
1696
36.6 %
(621)
54.1 % 
(917)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
34.4 %
(634)
50.9 % 
(939)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Streptococcus pyogenes MGAS315 (spyo2)
Bacteria
1865
33.9 %
(632)
51.5 % 
(961)
23.0 % 
(429)
38.6 %
38 aa 
1622 aa 





Mycoplasma genitalium G37 (mgen0)
Bacteria
480
42.7 %
(205)
64.2 % 
(308)
23.1 % 
(111)
31.7 %
37 aa 
1805 aa 





Mycoplasma pneumoniae M129 (mpne0)
Bacteria
688
32.6 %
(224)
49.3 % 
(339)
22.8 % 
(157)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis UAB CTIP (mpul0)
Bacteria
782
34.1 %
(267)
55.1 % 
(431)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Ureaplasma urealyticum (uure0)
Bacteria
611
33.9 %
(207)
53.4 % 
(326)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Fusobacterium nucleatum ATCC 25586 (fnuc0)
Bacteria
2067
31.6 %
(653)
48.6 % 
(1005)
25.8 % 
(534)
27.2 %
20 aa 
3165 aa 





Caulobacter crescentus (ccre0)
Bacteria
3737
33.0 %
(1234)
51.8 % 
(1936)
22.8 % 
(853)
67.2 %
30 aa 
2479 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
35.9 %
(1147)
53.6 % 
(1714)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Mesorhizobium loti MAFF303099 (mlot0)
Bacteria
7281
31.1 %
(2268)
49.7 % 
(3617)
22.6 % 
(1649)
62.5 %
30 aa 
3930 aa 





Agrobacterium tumefaciens C58 (atum0)
Bacteria
5299
35.0 %
(1856)
54.1 % 
(2869)
23.8 % 
(1262)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens C58 (Dupont) (atum1)
Bacteria
5402
34.6 %
(1869)
53.2 % 
(2875)
23.0 % 
(1245)
59.0 %
22 aa 
2831 aa 





Sinorhizobium meliloti 1021 (smel0)
Bacteria
6205
34.5 %
(2139)
53.2 % 
(3301)
23.8 % 
(1477)
62.2 %
31 aa 
2832 aa 





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
27.3 %
(375)
42.0 % 
(577)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia prowazekii Madrid E (rpro0)
Bacteria
834
40.6 %
(339)
60.8 % 
(507)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Neisseria meningitidis MC58 (nmen0)
Bacteria
2025
33.2 %
(673)
48.3 % 
(978)
23.2 % 
(470)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
32.8 %
(677)
48.0 % 
(991)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5116
31.4 %
(1608)
49.5 % 
(2532)
25.0 % 
(1279)
67.0 %
20 aa 
6889 aa 





Campylobacter jejuni  (cjej0)
Bacteria
1634
36.5 %
(597)
56.0 % 
(915)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
31.0 %
(486)
49.0 % 
(767)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
32.9 %
(490)
51.4 % 
(767)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Buchnera aphidicola Sg (baph0)
Bacteria
545
57.8 %
(315)
71.7 % 
(391)
17.1 % 
(93)
25.3 %
38 aa 
1413 aa 





Buchnera sp. APS (buch0)
Bacteria
574
59.2 %
(340)
71.8 % 
(412)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli K-12 (ecol0)
Bacteria
4289
36.1 %
(1549)
52.9 % 
(2270)
26.5 % 
(1137)
50.8 %
14 aa 
2383 aa 





Escherichia coli O157:H7  (ecol1)
Bacteria
5361
30.6 %
(1639)
46.5 % 
(2495)
24.0 % 
(1287)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 EDL933 (ecol2)
Bacteria
5349
30.5 %
(1632)
47.0 % 
(2513)
24.3 % 
(1298)
50.4 %
9 aa 
5188 aa 





Salmonella Typhi CT18 (styp0)
Bacteria
4767
31.8 %
(1514)
47.5 % 
(2263)
25.8 % 
(1229)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4553
35.1 %
(1596)
51.5 % 
(2344)
27.2 % 
(1238)
52.2 %
14 aa 
5559 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4083
33.0 %
(1348)
47.9 % 
(1957)
25.8 % 
(1053)
47.6 %
14 aa 
3705 aa 





Yersinia pestis KIM (ypes1)
Bacteria
4090
32.6 %
(1332)
47.5 % 
(1942)
26.5 % 
(1083)
47.6 %
14 aa 
3710 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
42.5 %
(726)
58.5 % 
(1000)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Pasteurella multocida PM70 (pmul0)
Bacteria
2014
41.0 %
(826)
59.5 % 
(1198)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Pseudomonas aeruginosa PAO1 (paer0)
Bacteria
5565
34.2 %
(1901)
53.7 % 
(2988)
26.8 % 
(1491)
66.6 %
23 aa 
5627 aa 





Vibrio cholerae N16961 (vcho0)
Bacteria
3828
32.8 %
(1255)
50.3 % 
(1924)
27.4 % 
(1047)
47.5 %
26 aa 
4558 aa 





Xanthomonas axonopodis pv. citri 306 (xaxo0)
Bacteria
4312
32.2 %
(1390)
51.0 % 
(2199)
25.0 % 
(1077)
64.8 %
30 aa 
4753 aa 





Xanthomonas campestris pv. campestris ATCC 33913 (xcam0)
Bacteria
4181
32.5 %
(1357)
51.2 % 
(2140)
25.3 % 
(1056)
65.1 %
21 aa 
3961 aa 





Xylella fastidiosa (xfas0)
Bacteria
2831
25.8 %
(731)
39.9 % 
(1129)
24.7 % 
(698)
52.6 %
30 aa 
3455 aa 





Borrelia burgdorferi (bbur0)
Bacteria
1637
20.5 %
(336)
36.3 % 
(594)
28.0 % 
(459)
28.2 %
30 aa 
2166 aa 





Treponema pallidum (tpal0)
Bacteria
1031
33.0 %
(340)
50.5 % 
(521)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima (tmar0)
Bacteria
1846
38.7 %
(714)
57.9 % 
(1068)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Guillardia theta Nucleomorph (gthe0)
Eukaryota
485
33.2 %
(161)
44.7 % 
(217)
20.2 % 
(98)
26.4 %
56 aa 
2057 aa 





Saccharomyces cerevisiae S288C (scer0)
Eukaryota
6344
29.8 %
(1893)
51.4 % 
(3260)
24.6 % 
(1562)
38.1 %
24 aa 
4910 aa 





Schizosaccharomyces pombe 972h- (spom0)
Eukaryota
5001
35.8 %
(1789)
59.4 % 
(2973)
20.7 % 
(1033)
36.1 %
14 aa 
4924 aa 





Drosophila melanogaster (dmel0)
Eukaryota
14348
34.7 %
(4974)
52.1 % 
(7477)
28.3 % 
(4065)
42.4 %
1 aa 
8805 aa 





Takifugu rubripes rubripes (trub0)
Eukaryota
38626
30.3 %
(11686)
41.4 % 
(15984)
16.7 % 
(6444)


4 aa 
5522 aa 





Caenorhabditis elegans (cele0)
Eukaryota
20216
26.7 %
(5397)
44.2 % 
(8931)
37.2 % 
(7514)
35.4 %
8 aa 
13055 aa 





Encephalitozoon cuniculi (ecun0)
Eukaryota
1996
29.2 %
(583)
50.6 % 
(1009)
20.7 % 
(413)
47.3 %
52 aa 
3436 aa 





Arabidopsis thaliana (atha0)
Eukaryota
25749
32.3 %
(8315)
54.2 % 
(13952)
27.1 % 
(6979)
36.0 %
19 aa 
5138 aa 





Homo sapiens cDNA (huge0)
Eukaryota
2001
38.1 %
(762)
70.9 % 
(1419)
22.1 % 
(442)
49.1 %
73 aa 
3434 aa 





Mus musculus cDNA (mmus0)
Eukaryota
10465
32.9 %
(3443)
44.8 % 
(4690)
20.4 % 
(2136)


12 aa 
1314 aa 





Plasmodium falciparum (pfal0)
Eukaryota
422
24.2 %
(102)
39.3 % 
(166)
46.2 % 
(195)
19.8 %
54 aa 
4981 aa 





Leishmania major Friedlin (lmaj0)
Eukaryota
79
29.1 %
(23)
41.8 % 
(33)
21.5 % 
(17)
63.1 %
107 aa 
2241 aa 





Pseudomonas aeruginosa phage PA01 (bppa0)
Viruses
34
11.8 %
(4)
11.8 % 
(4)
8.8 % 
(3)


23 aa 
745 aa 





Haemophilus influenzae phage Rd (bprd0)
Viruses
47
6.4 %
(3)
19.1 % 
(9)
8.5 % 
(4)


38 aa 
731 aa 





Bacteriophage T3 (bpt30)
Viruses
44
18.2 %
(8)
25.0 % 
(11)
15.9 % 
(7)
49.9 %
25 aa 
884 aa 





Bacteriophage A511 (bpa50)
Viruses
11
0.0 %
(0)
0.0 % 
(0)
0.0 % 
(0)
36.7 %
106 aa 
562 aa 





Pseudomonas aeruginosa phage phi CTX Viruses. (bpct0)
Viruses
47
2.1 %
(1)
10.6 % 
(5)
12.8 % 
(6)
62.6 %
35 aa 
904 aa 





Haemophilus phage HP1 (bphp0)
Viruses
41
4.9 %
(2)
19.5 % 
(8)
12.2 % 
(5)
40.0 %
61 aa 
925 aa 





Bacteriophage P4 (bpp40)
Viruses
12
8.3 %
(1)
33.3 % 
(4)
0.0 % 
(0)
49.5 %
88 aa 
777 aa 





Bacteriophage Mu (bpmu0)
Viruses
53
9.4 %
(5)
13.2 % 
(7)
11.3 % 
(6)
52.1 %
39 aa 
690 aa 





Enterobacteria phage 186 (bp180)
Viruses
46
15.2 %
(7)
23.9 % 
(11)
13.0 % 
(6)
53.1 %
58 aa 
812 aa 





Bacteriophage P2 (bpp20)
Viruses
42
4.8 %
(2)
19.0 % 
(8)
14.3 % 
(6)
50.2 %
56 aa 
815 aa 





Enterobacteria phage T4 (bpt40)
Viruses
274
14.6 %
(40)
24.5 % 
(67)
10.2 % 
(28)
35.3 %
26 aa 
1289 aa 





Bacteriophage H-19B (bph10)
Viruses
22
9.1 %
(2)
22.7 % 
(5)
13.6 % 
(3)
45.9 %
44 aa 
315 aa 





Bacteriophage P22 (bpp21)
Viruses
36
16.7 %
(6)
22.2 % 
(8)
5.6 % 
(2)
47.1 %
47 aa 
667 aa 





Bacteriophage SP6 (bpsp0)
Viruses
20
15.0 %
(3)
30.0 % 
(6)
5.0 % 
(1)
46.1 %
42 aa 
874 aa 





Bacteriophage T7 (bpt70)
Viruses
58
15.5 %
(9)
24.1 % 
(14)
12.1 % 
(7)
48.4 %
29 aa 
1318 aa 





Bacteriophage B103 (bpb11)
Viruses
17
11.8 %
(2)
23.5 % 
(4)
5.9 % 
(1)
37.7 %
100 aa 
860 aa 





Streptococcus phage Cp-1 (bpcp0)
Viruses
28
7.1 %
(2)
10.7 % 
(3)
14.3 % 
(4)
38.9 %
62 aa 
586 aa 





Bacillus phage PZA (bppz0)
Viruses
27
7.4 %
(2)
14.8 % 
(4)
11.1 % 
(3)
39.7 %
37 aa 
854 aa 





Bacteriophage phig1e (bpg10)
Viruses
50
0.0 %
(0)
18.0 % 
(9)
12.0 % 
(6)
42.7 %
49 aa 
1662 aa 





Bacteriophage A118 (bpa10)
Viruses
72
2.8 %
(2)
16.7 % 
(12)
13.9 % 
(10)
36.1 %
21 aa 
1794 aa 





Bacteriophage B1 (bpb10)
Viruses
11
0.0 %
(0)
9.1 % 
(1)
0.0 % 
(0)
36.8 %
65 aa 
273 aa 





Methanobacterium phage psiM2 (bpps0)
Viruses
31
0.0 %
(0)
16.1 % 
(5)
6.5 % 
(2)
46.3 %
90 aa 
1186 aa 





Streptococcus thermophilus bacteriophage Sfi11 (bpsf0)
Viruses
25
0.0 %
(0)
4.0 % 
(1)
12.0 % 
(3)
38.6 %
53 aa 
1510 aa 





Bacteriophage sk1 (bpsk0)
Viruses
54
0.0 %
(0)
3.7 % 
(2)
11.1 % 
(6)
34.5 %
39 aa 
999 aa 





Bacteriophage lambda (bpla0)
Viruses
66
16.7 %
(11)
28.8 % 
(19)
10.6 % 
(7)
49.9 %
28 aa 
1132 aa 





Enterobacteria phage BF23 (bpbf0)
Viruses
8
0.0 %
(0)
12.5 % 
(1)
12.5 % 
(1)
38.5 %
75 aa 
595 aa 





Lactococcus phage c2 (bpc20)
Viruses
39
0.0 %
(0)
7.7 % 
(3)
15.4 % 
(6)
36.3 %
22 aa 
706 aa 







DATE July 11 2002

BLAST      -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST  -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane   -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.
G+C content-> Guanine and Cytosine content of genome 
Seq length -> Minimum and maximum length of ORF 






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
G+C
content		
Seq length




min.
max.





Aeropyrum pernix K1 (aper0)
Archaea
2694
17.3 %
(465)
26.5 % 
(713)
23.9 % 
(643)
56.3 %
50 aa 
1933 aa 





Sulfolobus solfataricus (ssol0)
Archaea
2977
26.2 %
(779)
39.9 % 
(1187)
23.8 % 
(710)
35.8 %
40 aa 
1426 aa 





Sulfolobus tokodaii strain7 (stok0)
Archaea
2826
25.5 %
(720)
38.9 % 
(1099)
25.7 % 
(726)
32.8 %
50 aa 
1442 aa 





Pyrobaculum aerophilum strain IM2 (paer1)
Archaea
2605
22.8 %
(593)
35.9 % 
(936)
25.8 % 
(673)
51.4 %
18 aa 
2785 aa 





Archaeoglobus fulgidus (aful0)
Archaea
2407
30.4 %
(732)
45.9 % 
(1105)
23.7 % 
(571)
48.6 %
25 aa 
2425 aa 





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
26.1 %
(680)
41.4 % 
(1078)
22.0 % 
(573)
65.9 %
30 aa 
1370 aa 





Methanobacterium thermoautotrophicum (mthe0)
Archaea
1869
31.7 %
(592)
48.4 % 
(904)
23.0 % 
(430)
49.5 %
35 aa 
1787 aa 





Methanococcus jannaschii (mjan0)
Archaea
1770
28.8 %
(510)
43.9 % 
(777)
20.7 % 
(366)
31.3 %
22 aa 
2894 aa 





Methanopyrus kandleri AV19 (mkan0)
Archaea
1687
25.5 %
(431)
41.1 % 
(694)
20.2 % 
(340)
61.2 %
39 aa 
2042 aa 





Methanosarcina acetivorans str. C2A (mace0)
Archaea
4252
24.1 %
(1023)
40.1 % 
(1703)
27.4 % 
(1167)
42.7 %
41 aa 
4226 aa 





Pyrococcus abyssi (paby0)
Archaea
1765
33.0 %
(582)
49.1 % 
(866)
24.6 % 
(435)
44.7 %
18 aa 
2122 aa 





Pyrococcus horikoshii (phor0)
Archaea
2064
26.4 %
(545)
39.0 % 
(805)
28.1 % 
(579)
41.9 %
50 aa 
4436 aa 





Pyrococcus furiosus DSM 3638 (pfur0)
Archaea
2065
30.1 %
(622)
45.3 % 
(936)
24.8 % 
(513)
40.8 %
21 aa 
1740 aa 





Thermoplasma acidophilum (taci0)
Archaea
1478
35.8 %
(529)
52.4 % 
(774)
23.0 % 
(340)
46.0 %
45 aa 
2081 aa 





Thermoplasma volcanium (tvol0)
Archaea
1526
35.4 %
(540)
50.8 % 
(775)
22.3 % 
(340)
39.9 %
50 aa 
2076 aa 





Aquifex aeolicus (aaeo0)
Bacteria
1553
39.0 %
(606)
53.8 % 
(835)
24.1 % 
(374)
43.3 %
47 aa 
1574 aa 





Chlamydia muridarum (cmur0)
Bacteria
916
35.3 %
(323)
48.6 % 
(445)
27.0 % 
(247)
40.3 %
33 aa 
3335 aa 





Chlamydia trachomatis (ctra0)
Bacteria
894
36.2 %
(324)
49.0 % 
(438)
27.3 % 
(244)
41.3 %
45 aa 
1786 aa 





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1109
28.9 %
(321)
39.7 % 
(440)
31.4 % 
(348)
40.6 %
30 aa 
1826 aa 





Chlamydophila pneumoniae (cpne1)
Bacteria
1052
30.7 %
(323)
42.1 % 
(443)
32.0 % 
(337)
40.6 %
40 aa 
1826 aa 





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
30.3 %
(324)
41.8 % 
(447)
31.2 % 
(334)
40.6 %
40 aa 
1826 aa 





Synechocystis PCC6803 (syne0)
Bacteria
3167
32.3 %
(1023)
46.7 % 
(1479)
26.6 % 
(843)
47.7 %
29 aa 
4199 aa 





Anabaenap sp. PCC7120 (anab0)
Bacteria
6129
27.2 %
(1666)
40.8 % 
(2499)
25.5 % 
(1564)
41.3 %
17 aa 
4936 aa 





Deinococcus radiodurans (drad0)
Bacteria
3102
29.3 %
(910)
45.2 % 
(1403)
20.1 % 
(623)
66.6 %
37 aa 
1940 aa 





Mycobacterium leprae (mlep0)
Bacteria
1605
38.7 %
(621)
52.1 % 
(836)
25.9 % 
(415)
57.8 %
33 aa 
3076 aa 





Mycobacterium tuberculosis (mtub0)
Bacteria
3869
30.9 %
(1197)
47.2 % 
(1826)
22.1 % 
(856)
65.6 %
27 aa 
4151 aa 





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
28.3 %
(1183)
42.7 % 
(1787)
21.3 % 
(890)
65.6 %
30 aa 
4151 aa 





Bacillus halodurans (bhal0)
Bacteria
4066
32.5 %
(1320)
47.0 % 
(1912)
28.8 % 
(1171)
43.7 %
11 aa 
1816 aa 





Bacillus subtilis (bsub0)
Bacteria
4100
33.0 %
(1351)
48.0 % 
(1968)
29.3 % 
(1200)
43.5 %
20 aa 
4930 aa 





Listeria innocua Clip 11262 (linn0)
Bacteria
3043
33.6 %
(1022)
49.8 % 
(1516)
26.3 % 
(801)
37.4 %
37 aa 
2167 aa 





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
36.8 %
(1048)
53.5 % 
(1522)
28.1 % 
(800)
38.0 %
28 aa 
2044 aa 





Staphylococcus aureus (saur0)
Bacteria
2748
34.1 %
(937)
47.5 % 
(1304)
27.6 % 
(758)
32.8 %
16 aa 
6713 aa 





Staphylococcus aureus (saur1)
Bacteria
2624
35.9 %
(942)
49.7 % 
(1305)
28.2 % 
(741)
32.8 %
16 aa 
6713 aa 





Clostridium acetobutylicum (cace0)
Bacteria
3848
32.4 %
(1248)
48.9 % 
(1880)
28.0 % 
(1076)
30.9 %
27 aa 
2870 aa 





Clostridium perfringens 13 (cper0)
Bacteria
2723
33.7 %
(919)
48.9 % 
(1332)
30.5 % 
(831)
28.5 %
37 aa 
2104 aa 





Mycoplasma genitalium (mgen0)
Bacteria
480
41.0 %
(197)
57.3 % 
(275)
23.1 % 
(111)
31.7 %
37 aa 
1805 aa 





Mycoplasma pneumoniae (mpne0)
Bacteria
688
31.5 %
(217)
44.5 % 
(306)
22.8 % 
(157)
40.0 %
37 aa 
1882 aa 





Mycoplasma pulmonis (mpul0)
Bacteria
782
32.5 %
(254)
46.0 % 
(360)
28.5 % 
(223)
26.6 %
37 aa 
3216 aa 





Ureaplasma urealyticum (uure0)
Bacteria
611
33.1 %
(202)
45.7 % 
(279)
26.4 % 
(161)
25.5 %
34 aa 
5005 aa 





Lactococcus lactis subsp. lactis (llac0)
Bacteria
2266
34.6 %
(785)
49.8 % 
(1129)
27.1 % 
(613)
35.3 %
31 aa 
1983 aa 





Streptococcus pneumoniae (spne0)
Bacteria
2094
34.0 %
(711)
49.3 % 
(1032)
25.4 % 
(531)
39.7 %
27 aa 
4776 aa 





Streptococcus pneumoniae R6 (spne1)
Bacteria
2043
35.6 %
(727)
51.2 % 
(1046)
25.2 % 
(515)
39.7 %
20 aa 
2551 aa 





Streptococcus pyogenes (spyo0)
Bacteria
1696
35.2 %
(597)
51.5 % 
(873)
24.1 % 
(408)
38.5 %
27 aa 
2045 aa 





Streptococcus pyogenes MGAS8232 (spyo1)
Bacteria
1845
33.1 %
(611)
48.4 % 
(893)
23.2 % 
(428)
38.5 %
33 aa 
1647 aa 





Fusobacterium nucleatum ATCC 25586 (fnuc0)
Bacteria
2065
30.3 %
(625)
44.3 % 
(914)
25.8 % 
(533)
27.2 %
20 aa 
3165 aa 





Caulobacter crescentus (ccre0)
Bacteria
3737
32.2 %
(1202)
49.8 % 
(1860)
22.8 % 
(853)
67.2 %
30 aa 
2479 aa 





Brucella melitensis 16M (bmel0)
Bacteria
3198
34.7 %
(1110)
50.2 % 
(1605)
22.4 % 
(715)
57.2 %
41 aa 
2867 aa 





Mesorhizobium loti (mlot0)
Bacteria
7281
30.6 %
(2226)
47.7 % 
(3476)
22.6 % 
(1649)
62.5 %
30 aa 
3930 aa 





Agrobacterium tumefaciens (atum0)
Bacteria
5299
34.0 %
(1803)
51.7 % 
(2737)
23.8 % 
(1262)
59.0 %
30 aa 
2802 aa 





Agrobacterium tumefaciens C58 (atum1)
Bacteria
5402
33.6 %
(1817)
51.0 % 
(2756)
23.0 % 
(1245)
59.0 %
22 aa 
2831 aa 





Sinorhizobium meliloti (smel0)
Bacteria
6205
33.6 %
(2086)
51.4 % 
(3189)
23.8 % 
(1477)
62.2 %
31 aa 
2832 aa 





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
25.8 %
(355)
36.9 % 
(507)
28.0 % 
(385)
32.4 %
41 aa 
2021 aa 





Rickettsia prowazekii (rpro0)
Bacteria
834
38.8 %
(324)
52.9 % 
(441)
32.5 % 
(271)
29.0 %
41 aa 
2340 aa 





Neisseria meningitidis (nmen0)
Bacteria
2025
32.0 %
(647)
45.1 % 
(913)
23.2 % 
(470)
51.5 %
22 aa 
2703 aa 





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
31.6 %
(652)
44.6 % 
(920)
22.8 % 
(471)
51.8 %
23 aa 
2015 aa 





Ralstonia solanacearum GMI1000 (rsol0)
Bacteria
5116
30.6 %
(1566)
46.6 % 
(2386)
25.0 % 
(1279)
67.0 %
20 aa 
6889 aa 





Campylobacter jejuni (cjej0)
Bacteria
1634
35.3 %
(577)
50.9 % 
(832)
27.8 % 
(454)
30.5 %
14 aa 
1517 aa 





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
30.3 %
(474)
42.6 % 
(667)
24.6 % 
(386)
38.9 %
12 aa 
2893 aa 





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
31.9 %
(476)
45.3 % 
(676)
25.4 % 
(379)
39.2 %
21 aa 
3194 aa 





Buchnera sp. APS (buch0)
Bacteria
574
58.4 %
(335)
71.3 % 
(409)
16.0 % 
(92)
26.4 %
38 aa 
1407 aa 





Escherichia coli (ecol0)
Bacteria
4289
35.0 %
(1502)
50.1 % 
(2147)
26.5 % 
(1137)
50.8 %
14 aa 
2383 aa 





Escherichia coli O157:H7 (ecol1)
Bacteria
5361
29.6 %
(1586)
42.8 % 
(2294)
24.0 % 
(1287)
50.5 %
14 aa 
5291 aa 





Escherichia coli O157:H7 (ecol2)
Bacteria
5349
29.6 %
(1582)
43.2 % 
(2310)
24.3 % 
(1298)
50.4 %
9 aa 
5188 aa 





Salmonella typhi CT18 (styp0)
Bacteria
4767
30.9 %
(1473)
44.2 % 
(2107)
25.8 % 
(1229)
51.9 %
9 aa 
3624 aa 





Salmonella typhimurium LT2 (styp1)
Bacteria
4553
34.0 %
(1547)
48.4 % 
(2205)
27.2 % 
(1238)
52.2 %
14 aa 
5559 aa 





Yersinia pestis CO92 (ypes0)
Bacteria
4083
31.8 %
(1300)
45.4 % 
(1853)
25.8 % 
(1053)
47.6 %
14 aa 
3705 aa 





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
41.4 %
(707)
54.9 % 
(938)
23.1 % 
(394)
38.2 %
21 aa 
1694 aa 





Pasteurella multocida (pmul0)
Bacteria
2014
39.7 %
(799)
55.2 % 
(1111)
27.3 % 
(549)
40.4 %
37 aa 
3919 aa 





Pseudomonas aeruginosa (paer0)
Bacteria
5565
33.2 %
(1848)
40.7 % 
(2267)
26.8 % 
(1491)
66.6 %
23 aa 
5627 aa 





Vibrio cholerae (vcho0)
Bacteria
3828
32.0 %
(1225)
46.4 % 
(1778)
27.4 % 
(1047)
47.5 %
26 aa 
4558 aa 





Xylella fastidiosa (xfas0)
Bacteria
2831
25.0 %
(708)
37.1 % 
(1051)
24.7 % 
(698)
52.6 %
30 aa 
3455 aa 





Borrelia burgdorferi (bbur0)
Bacteria
1637
19.8 %
(324)
29.4 % 
(482)
28.0 % 
(459)
28.2 %
30 aa 
2166 aa 





Treponema pallidum (tpal0)
Bacteria
1031
31.7 %
(327)
45.2 % 
(466)
24.8 % 
(256)
52.8 %
30 aa 
1533 aa 





Thermotoga maritima (tmar0)
Bacteria
1846
37.5 %
(692)
52.7 % 
(972)
26.5 % 
(489)
46.2 %
30 aa 
1690 aa 





Saccharomyces cerevisiae (scer0)
Eukaryota
6344
29.1 %
(1846)
42.5 % 
(2699)
24.6 % 
(1562)
38.1 %
24 aa 
4910 aa 





Schizosaccharomyces pombe (spom0)
Eukaryota
5001
34.9 %
(1744)
48.9 % 
(2445)
20.7 % 
(1033)
36.1 %
14 aa 
4924 aa 





Drosophila melanogaster (dmel0)
Eukaryota
14348
34.1 %
(4891)
45.5 % 
(6529)
28.3 % 
(4065)
42.4 %
1 aa 
8805 aa 





Homo sapiens (huge0)
Eukaryota
1987
36.5 %
(725)
54.9 % 
(1090)
21.7 % 
(432)
49.1
73 aa 
3434 aa 





Caenorhabditis elegans (cele0)
Eukaryota
20216
26.3 %
(5324)
36.7 % 
(7412)
37.2 % 
(7514)
35.4 %
8 aa 
13055 aa 





Encephalitozoon cuniculi (ecun0)
Eukaryota
1996
28.8 %
(574)
41.2 % 
(822)
20.7 % 
(413)
47.3 %
52 aa 
3436 aa 





Arabidopsis thaliana (atha0)
Eukaryota
25749
31.9 %
(8202)
47.9 % 
(12327)
27.1 % 
(6979)
36.0 %
19 aa 
5138 aa 





Bacteriophage T4 (bpt40)
Viruses
274
14.2 %
(39)
19.0 % 
(52)
10.2 % 
(28)
35.3 %
26 aa 
1289 aa 









DATE February 4 2002

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST 
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
Others







Aeropyrum pernix (aper0)
Archaea
2694
16.5 %
(444)
26.0 % 
(701)
17.3 % 
(467)
56.6 % 
(1526)





Sulfolobus solfataricus (ssol0)
Archaea
2977
25.2 %
(751)
39.7 % 
(1183)
19.3 % 
(574)
41.0 % 
(1220)





Sulfolobus tokodaii strain7 (stok0)
Archaea
2826
24.1 %
(681)
37.9 % 
(1070)
22.7 % 
(642)
39.4 % 
(1114)





Archaeoglobus fulgidus (aful0)
Archaea
2407
28.8 %
(693)
45.1 % 
(1085)
21.9 % 
(526)
33.1 % 
(796)





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
24.8 %
(646)
40.1 % 
(1045)
23.8 % 
(621)
36.0 % 
(939)





Methanobacterium thermoautotrophicum (mthe0)
Archaea
1869
30.4 %
(568)
47.1 % 
(881)
18.7 % 
(350)
34.1 % 
(638)





Methanococcus jannaschii (mjan0)
Archaea
1770
27.5 %
(486)
43.3 % 
(766)
17.3 % 
(306)
39.4 % 
(698)





Pyrococcus abyssi (paby0)
Archaea
1765
31.3 %
(552)
47.6 % 
(840)
15.4 % 
(271)
37.1 % 
(654)





Pyrococcus horikoshii (phor0)
Archaea
2064
24.9 %
(514)
37.9 % 
(782)
20.2 % 
(417)
41.9 % 
(865)





Thermoplasma acidophilum (taci0)
Archaea
1478
34.6 %
(512)
50.7 % 
(749)
19.4 % 
(286)
30.0 % 
(443)





Thermoplasma volcanium (tvol0)
Archaea
1526
33.8 %
(516)
49.4 % 
(754)
21.6 % 
(329)
29.0 % 
(443)





Aquifex aeolicus (aaeo0)
Bacteria
1553
36.9 %
(573)
52.8 % 
(820)
10.7 % 
(166)
36.5 % 
(567)





Chlamydia muridarum (cmur0)
Bacteria
916
33.3 %
(305)
46.6 % 
(427)
17.7 % 
(162)
35.7 % 
(327)





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1109
27.2 %
(302)
38.4 % 
(426)
23.4 % 
(259)
38.2 % 
(424)





Chlamydophila pneumoniae (cpne1)
Bacteria
1052
28.9 %
(304)
40.7 % 
(428)
18.6 % 
(196)
40.7 % 
(428)





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
28.4 %
(304)
40.2 % 
(430)
18.3 % 
(196)
41.4 % 
(443)





Chlamydia trachomatis (ctra0)
Bacteria
894
34.0 %
(304)
47.3 % 
(423)
16.0 % 
(143)
36.7 % 
(328)





Anabaenap sp. PCC7120 (anab0)
Bacteria
6132
26.6 %
(1630)
40.0 % 
(2455)
21.3 % 
(1306)
38.7 % 
(2371)





Synechocystis PCC6803 (syne0)
Bacteria
3167
31.2 %
(989)
45.9 % 
(1453)
17.1 % 
(540)
37.1 % 
(1174)





Mycobacterium leprae (mlep0)
Bacteria
1605
36.7 %
(589)
50.8 % 
(815)
17.3 % 
(277)
32.0 % 
(513)





Mycobacterium tuberculosis (mtub0)
Bacteria
3869
29.5 %
(1142)
46.1 % 
(1783)
13.6 % 
(525)
40.3 % 
(1561)





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
27.0 %
(1130)
41.7 % 
(1746)
19.9 % 
(832)
38.4 % 
(1609)





Bacillus halodurans (bhal0)
Bacteria
4066
31.1 %
(1266)
45.8 % 
(1864)
23.7 % 
(963)
30.5 % 
(1239)





Bacillus subtilis (bsub0)
Bacteria
4100
31.5 %
(1292)
47.1 % 
(1930)
24.0 % 
(986)
28.9 % 
(1184)





Clostridium acetobutylicum (cace0)
Bacteria
3672
31.2 %
(1147)
48.0 % 
(1763)
19.6 % 
(721)
32.4 % 
(1188)





Listeria innocua Clip 11262 (linn0)
Bacteria
2968
32.5 %
(964)
48.9 % 
(1450)
19.6 % 
(581)
31.6 % 
(937)





Listeria monocytogenes EGD-e (lmon0)
Bacteria
2846
35.3 %
(1004)
52.1 % 
(1482)
18.8 % 
(536)
29.1 % 
(828)





Mycoplasma genitalium (mgen0)
Bacteria
480
39.6 %
(190)
56.2 % 
(270)
11.5 % 
(55)
32.3 % 
(155)





Mycoplasma pneumoniae (mpne0)
Bacteria
688
29.8 %
(205)
43.2 % 
(297)
11.9 % 
(82)
44.9 % 
(309)





Mycoplasma pulmonis (mpul0)
Bacteria
782
31.2 %
(244)
45.4 % 
(355)
18.3 % 
(143)
36.3 % 
(284)





Ureaplasma urealyticum (uure0)
Bacteria
611
32.1 %
(196)
44.5 % 
(272)
18.5 % 
(113)
37.0 % 
(226)





Staphylococcus aureus (saur0)
Bacteria
2748
33.2 %
(911)
46.7 % 
(1282)
24.2 % 
(665)
29.1 % 
(801)





Staphylococcus aureus (saur1)
Bacteria
2624
34.9 %
(915)
49.0 % 
(1285)
23.3 % 
(612)
27.7 % 
(727)





Lactococcus lactis subsp. lactis (llac0)
Bacteria
2266
32.7 %
(740)
48.4 % 
(1097)
21.4 % 
(486)
30.1 % 
(683)





Streptococcus pneumoniae (spne0)
Bacteria
2094
32.8 %
(687)
47.8 % 
(1001)
27.6 % 
(577)
24.6 % 
(516)





Streptococcus pneumoniae R6 (spne1)
Bacteria
2043
34.4 %
(703)
50.0 % 
(1021)
24.5 % 
(500)
25.6 % 
(522)





Streptococcus pyogenes (spyo0)
Bacteria
1696
33.4 %
(567)
49.7 % 
(843)
19.2 % 
(326)
31.1 % 
(527)





Caulobacter crescentus (ccre0)
Bacteria
3737
30.6 %
(1144)
48.5 % 
(1814)
15.6 % 
(584)
35.8 % 
(1339)





Agrobacterium tumefaciens (atum0)
Bacteria
5299
32.8 %
(1737)
50.5 % 
(2676)
19.6 % 
(1041)
29.9 % 
(1582)





Mesorhizobium loti (mlot0)
Bacteria
7281
29.0 %
(2114)
46.7 % 
(3398)
20.8 % 
(1515)
32.5 % 
(2368)





Sinorhizobium meliloti (smel0)
Bacteria
6205
32.3 %
(2004)
50.4 % 
(3125)
19.5 % 
(1209)
30.2 % 
(1871)





Rickettsia conorii Malish 7 (rcon0)
Bacteria
1374
24.7 %
(340)
36.8 % 
(506)
34.9 % 
(480)
28.2 % 
(388)





Rickettsia prowazekii (rpro0)
Bacteria
834
37.2 %
(310)
52.2 % 
(435)
18.0 % 
(150)
29.9 % 
(249)





Neisseria meningitidis (nmen0)
Bacteria
2025
30.4 %
(616)
43.6 % 
(882)
23.6 % 
(478)
32.8 % 
(665)





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
30.0 %
(620)
43.3 % 
(894)
24.1 % 
(498)
32.6 % 
(673)





Salmonella typhi CT18 (styp0)
Bacteria
4767
29.4 %
(1402)
43.3 % 
(2062)
22.3 % 
(1062)
34.5 % 
(1643)





Salmonella typhimurium LT2 (styp1)
Bacteria
4553
32.4 %
(1474)
47.3 % 
(2152)
21.0 % 
(956)
31.7 % 
(1445)





Campylobacter jejuni (cjej0)
Bacteria
1634
33.5 %
(548)
49.4 % 
(808)
17.9 % 
(292)
32.7 % 
(534)





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
29.0 %
(454)
41.7 % 
(653)
19.3 % 
(302)
39.0 % 
(611)





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
30.4 %
(454)
44.1 % 
(657)
16.4 % 
(245)
39.5 % 
(589)





Buchnera sp. APS (buch0)
Bacteria
574
55.6 %
(319)
69.0 % 
(396)
9.8 % 
(56)
21.3 % 
(122)





Escherichia coli (ecol0)
Bacteria
4289
33.3 %
(1427)
49.1 % 
(2104)
20.7 % 
(889)
30.2 % 
(1296)





Escherichia coli O157:H7 (ecol1)
Bacteria
5361
28.2 %
(1513)
42.0 % 
(2254)
23.5 % 
(1262)
34.4 % 
(1845)





Escherichia coli O157:H7 (ecol2)
Bacteria
5349
28.2 %
(1509)
42.5 % 
(2273)
23.4 % 
(1250)
34.1 % 
(1826)





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
38.8 %
(663)
53.4 % 
(912)
19.3 % 
(330)
27.3 % 
(467)





Pasteurella multocida (pmul0)
Bacteria
2014
37.6 %
(758)
53.7 % 
(1081)
17.5 % 
(352)
28.8 % 
(581)





Yersinia pestis CO92 (ypes0)
Bacteria
4083
30.3 %
(1239)
43.1 % 
(1759)
20.6 % 
(843)
36.3 % 
(1481)





Pseudomonas aeruginosa (paer0)
Bacteria
5565
31.8 %
(1771)
50.4 % 
(2804)
15.8 % 
(877)
33.9 % 
(1884)





Vibrio cholerae (vcho0)
Bacteria
3828
30.7 %
(1176)
45.7 % 
(1749)
25.1 % 
(960)
29.2 % 
(1119)





Xylella fastidiosa (xfas0)
Bacteria
2831
24.0 %
(680)
36.0 % 
(1020)
32.3 % 
(913)
31.7 % 
(898)





Borrelia burgdorferi (bbur0)
Bacteria
1637
18.9 %
(309)
28.2 % 
(462)
24.6 % 
(402)
47.2 % 
(773)





Treponema pallidum (tpal0)
Bacteria
1031
29.6 %
(305)
43.6 % 
(450)
17.9 % 
(185)
38.4 % 
(396)





Thermotoga maritima (tmar0)
Bacteria
1846
35.8 %
(660)
51.7 % 
(954)
17.4 % 
(321)
30.9 % 
(571)





Deinococcus radiodurans (drad0)
Bacteria
3102
28.3 %
(878)
44.3 % 
(1374)
15.1 % 
(467)
40.7 % 
(1261)





Saccharomyces cerevisiae (scer0)
Eukaryota
6343
28.4 %
(1799)
41.7 % 
(2644)
11.6 % 
(735)
46.7 % 
(2964)





Drosophila melanogaster (dmel0)
Eukaryota
14348
33.5 %
(4803)
45.1 % 
(6467)
11.2 % 
(1601)
43.8 % 
(6280)





Homo sapiens (huge0)
Eukaryota
1871
35.8 %
(669)
54.9 % 
(1027)
2.1 % 
(40)
43.0 % 
(804)





Caenorhabditis elegans (cele0)
Eukaryota
20321
25.9 %
(5266)
36.7 % 
(7449)
16.8 % 
(3413)
46.5 % 
(9459)





Arabidopsis thaliana (atha0)
Eukaryota
25749
31.2 %
(8046)
47.8 % 
(12315)
8.5 % 
(2196)
43.6 % 
(11238)





Bacteriophage T4 (bpt40)
Viruses
274
13.1 %
(36)
18.2 % 
(50)
38.3 % 
(105)
43.4 % 
(119)









DATE October 25 2001

BLAST     -> Ratio of orfs, whose 3D-structures are predicted by BLAST
PSI-BLAST -> Ratio of orfs, whose 3D-structures are predicted by BLAST or PSI-BLAST
Membrane  -> Ratio of orfs, most of their regions are transmembrane helices
Figures in () are the numbers of ORFs.






ORGANISM
Norf
BLAST
PSI-BLAST
Membrane
Others








Aeropyrum pernix (aper0)
Archaea
2694
16.3 %
(438)
25.8 % 
(694)
17.4 % 
(468)
56.9 % 
(1532)





Sulfolobus solfataricus (ssol0)
Archaea
2977
24.8 %
(737)
38.7 % 
(1152)
19.3 % 
(574)
42.0 % 
(1251)





Archaeoglobus fulgidus (aful0)
Archaea
2407
27.8 %
(670)
44.2 % 
(1063)
21.9 % 
(526)
34.0 % 
(818)





Halobacterium sp. NRC-1 (halo0)
Archaea
2605
24.2 %
(631)
39.7 % 
(1033)
24.0 % 
(624)
36.4 % 
(948)





Methanobacterium thermoautotrophicum (mthe0)
Archaea
1869
29.8 %
(557)
46.3 % 
(865)
18.9 % 
(354)
34.8 % 
(650)





Methanococcus jannaschii (mjan0)
Archaea
1770
26.7 %
(472)
42.8 % 
(757)
17.4 % 
(308)
39.8 % 
(705)





Pyrococcus abyssi (paby0)
Archaea
1765
30.7 %
(541)
47.4 % 
(837)
15.4 % 
(272)
37.2 % 
(656)





Pyrococcus horikoshii (phor0)
Archaea
2064
24.5 %
(506)
37.7 % 
(779)
20.3 % 
(418)
42.0 % 
(867)





Thermoplasma acidophilum (taci0)
Archaea
1478
34.0 %
(503)
50.3 % 
(744)
19.4 % 
(286)
30.3 % 
(448)





Thermoplasma volcanium (tvol0)
Archaea
1526
33.4 %
(510)
49.0 % 
(747)
21.6 % 
(330)
29.4 % 
(449)





Aquifex aeolicus (aaeo0)
Bacteria
1553
35.8 %
(556)
51.5 % 
(800)
10.8 % 
(167)
37.7 % 
(586)





Chlamydia muridarum (cmur0)
Bacteria
916
32.3 %
(296)
46.1 % 
(422)
17.7 % 
(162)
36.2 % 
(332)





Chlamydophila pneumoniae AR39 (cpne0)
Bacteria
1109
26.3 %
(292)
37.7 % 
(418)
23.4 % 
(259)
39.0 % 
(432)





Chlamydophila pneumoniae (cpne1)
Bacteria
1052
27.9 %
(294)
39.8 % 
(419)
18.6 % 
(196)
41.5 % 
(437)





Chlamydophila pneumoniae J138 (cpne2)
Bacteria
1069
27.6 %
(295)
39.5 % 
(422)
18.3 % 
(196)
42.2 % 
(451)





Chlamydia trachomatis (ctra0)
Bacteria
894
32.9 %
(294)
46.3 % 
(414)
16.0 % 
(143)
37.7 % 
(337)





Synechocystis PCC6803 (syne0)
Bacteria
3167
30.6 %
(969)
45.8 % 
(1449)
17.1 % 
(540)
37.2 % 
(1178)





Mycobacterium leprae (mlep0)
Bacteria
1605
35.8 %
(574)
50.5 % 
(810)
17.3 % 
(277)
32.3 % 
(518)





Mycobacterium tuberculosis (mtub0)
Bacteria
3869
29.1 %
(1124)
45.8 % 
(1772)
13.6 % 
(525)
40.6 % 
(1572)





Mycobacterium tuberculosis CDC1551 (mtub1)
Bacteria
4187
26.6 %
(1112)
41.4 % 
(1733)
19.8 % 
(831)
38.8 % 
(1623)





Bacillus halodurans (bhal0)
Bacteria
4066
30.4 %
(1238)
45.2 % 
(1836)
23.7 % 
(964)
31.1 % 
(1266)





Bacillus subtilis (bsub0)
Bacteria
4100
30.9 %
(1266)
46.4 % 
(1902)
24.1 % 
(987)
29.5 % 
(1211)





Clostridium acetobutylicum (cace0)
Bacteria
3672
30.6 %
(1124)
47.2 % 
(1732)
19.6 % 
(721)
33.2 % 
(1219)





Lactococcus lactis subsp. lactis (llac0)
Bacteria
2266
31.9 %
(723)
48.5 % 
(1100)
21.4 % 
(485)
30.1 % 
(681)





Mycoplasma genitalium (mgen0)
Bacteria
480
38.3 %
(184)
54.8 % 
(263)
11.5 % 
(55)
33.8 % 
(162)





Mycoplasma pneumoniae (mpne0)
Bacteria
688
28.8 %
(198)
43.2 % 
(297)
11.9 % 
(82)
44.9 % 
(309)





Mycoplasma pulmonis (mpul0)
Bacteria
782
30.4 %
(238)
45.0 % 
(352)
18.3 % 
(143)
36.7 % 
(287)





Staphylococcus aureus (saur0)
Bacteria
2748
32.3 %
(887)
46.0 % 
(1264)
24.2 % 
(666)
29.8 % 
(818)





Staphylococcus aureus (saur1)
Bacteria
2624
34.0 %
(891)
48.4 % 
(1269)
23.4 % 
(613)
28.3 % 
(742)





Streptococcus pneumoniae (spne0)
Bacteria
2094
31.5 %
(660)
46.5 % 
(973)
27.7 % 
(581)
25.8 % 
(540)





Streptococcus pyogenes (spyo0)
Bacteria
1696
33.0 %
(560)
49.1 % 
(832)
19.2 % 
(326)
31.7 % 
(538)





Ureaplasma urealyticum (uure0)
Bacteria
611
31.4 %
(192)
43.5 % 
(266)
18.5 % 
(113)
38.0 % 
(232)





Agrobacterium tumefaciens (atum0)
Bacteria
5299
32.3 %
(1713)
50.0 % 
(2650)
19.7 % 
(1042)
30.3 % 
(1607)





Caulobacter crescentus (ccre0)
Bacteria
3737
30.1 %
(1123)
48.5 % 
(1811)
15.6 % 
(584)
35.9 % 
(1342)





Mesorhizobium loti (mlot0)
Bacteria
7281
28.6 %
(2082)
46.1 % 
(3358)
20.8 % 
(1517)
33.0 % 
(2406)





Rickettsia prowazekii (rpro0)
Bacteria
834
36.6 %
(305)
51.6 % 
(430)
18.0 % 
(150)
30.5 % 
(254)





Sinorhizobium meliloti (smel0)
Bacteria
6205
31.9 %
(1977)
50.1 % 
(3109)
19.5 % 
(1211)
30.4 % 
(1885)





Neisseria meningitidis (nmen0)
Bacteria
2025
29.9 %
(606)
43.8 % 
(887)
23.5 % 
(476)
32.7 % 
(662)





Neisseria meningitidis Z2491 (nmen1)
Bacteria
2065
29.3 %
(606)
43.2 % 
(892)
24.0 % 
(496)
32.8 % 
(677)





Campylobacter jejuni (cjej0)
Bacteria
1634
32.6 %
(533)
49.1 % 
(802)
17.9 % 
(293)
33.0 % 
(539)





Helicobacter pylori 26695 (hpyl0)
Bacteria
1566
28.4 %
(444)
41.1 % 
(644)
19.3 % 
(302)
39.6 % 
(620)





Helicobacter pylori J99 (hpyl1)
Bacteria
1491
29.6 %
(442)
43.7 % 
(651)
16.4 % 
(245)
39.9 % 
(595)





Buchnera sp. APS (buch0)
Bacteria
574
54.4 %
(312)
67.9 % 
(390)
9.8 % 
(56)
22.3 % 
(128)





Escherichia coli (ecol0)
Bacteria
4289
32.6 %
(1397)
48.5 % 
(2080)
20.8 % 
(890)
30.8 % 
(1319)





Escherichia coli O157:H7 (ecol1)
Bacteria
5361
27.6 %
(1479)
41.7 % 
(2235)
23.6 % 
(1263)
34.8 % 
(1863)





Escherichia coli O157:H7 (ecol2)
Bacteria
5349
27.6 %
(1475)
42.1 % 
(2253)
23.4 % 
(1250)
34.5 % 
(1846)





Haemophilus influenzae Rd (hinf0)
Bacteria
1709
37.7 %
(644)
52.5 % 
(897)
19.3 % 
(330)
28.2 % 
(482)





Pseudomonas aeruginosa (paer0)
Bacteria
5565
31.3 %
(1744)
49.9 % 
(2775)
15.8 % 
(877)
34.4 % 
(1913)





Pasteurella multocida (pmul0)
Bacteria
2014
36.7 %
(739)
53.3 % 
(1073)
17.5 % 
(352)
29.2 % 
(589)





Vibrio cholerae (vcho0)
Bacteria
3828
30.1 %
(1151)
45.2 % 
(1732)
25.1 % 
(961)
29.6 % 
(1135)





Xylella fastidiosa (xfas0)
Bacteria
2831
23.5 %
(665)
35.6 % 
(1008)
32.3 % 
(913)
32.1 % 
(910)





Borrelia burgdorferi (bbur0)
Bacteria
1637
18.4 %
(302)
27.9 % 
(456)
24.4 % 
(400)
47.7 % 
(781)





Treponema pallidum (tpal0)
Bacteria
1031
28.8 %
(297)
42.6 % 
(439)
17.9 % 
(185)
39.5 % 
(407)





Thermotoga maritima (tmar0)
Bacteria
1846
35.1 %
(648)
51.0 % 
(941)
17.5 % 
(323)
31.5 % 
(582)





Deinococcus radiodurans (drad0)
Bacteria
3102
27.8 %
(861)
44.0 % 
(1364)
15.0 % 
(466)
41.0 % 
(1272)





Saccharomyces cerevisiae (scer0)
Eukaryota
6343
27.9 %
(1767)
41.3 % 
(2621)
11.6 % 
(735)
47.1 % 
(2987)





Drosophila melanogaster (dmel0)
Eukaryota
14348
32.8 %
(4711)
45.3 % 
(6493)
11.2 % 
(1603)
43.6 % 
(6252)





Homo sapiens (huge0)
Eukaryota
1871
35.3 %
(660)
54.6 % 
(1022)
2.1 % 
(40)
43.2 % 
(809)





Caenorhabditis elegans (cele0)
Eukaryota
20019
25.5 %
(5100)
36.5 % 
(7310)
16.7 % 
(3334)
46.8 % 
(9375)





Arabidopsis thaliana (atha0)
Eukaryota
24418
30.6 %
(7477)
48.3 % 
(11784)
8.6 % 
(2098)
43.1 % 
(10536)





Bacteriophage T4 (bpt40)
Viruses
274
12.8 %
(35)
17.9 % 
(49)
38.3 % 
(105)
43.8 % 
(120)








DATAE Aug 9 2001



Fasta:3D   -> Ratio of orfs, whose 3D-structures are predicted by FASTA

Psi :3D    -> Ratio of orfs, whose 3D-structures are predicted by FASTA or PSI-BLAST

Blast:Func -> Ratio of orfs, whose functions are predicted by BLAST

Psi :Func  -> Ratio of orfs, whose functions are predicted by BLAST or PSI-BLAST

 Figures in () are the numbers of ORFs.






Bacteria:Proteobacteria
Norf
Fasta:3D
Psi:3D
Blast:Func
Psi:Func




E. coli 
4289
30.4 %(1303)
48.9 %(2097)
72.4 %(3106)
76.2 %(3270)




E. coliO157 
5349
25.8 %(1382)
43.4 %(2320)
65.2 %(3485)
69.7 %(3726)




V. cholerae
3828
27.5 %(1053)
45.3 %(1734)
59.6 %(2281)
64.5 %(2470)




H. influenzae
1709
35.3 %(603)
53.0 %(905)
74.1 %(1267)
77.9 %(1331)




P. aeruginosa
5565
29.7 %(1654)
50.6 %(2817)
63.9 %(3558)
69.8 %(3885)




X. fastidiosa
2831
21.9 %(619)
36.0 %(1019)
46.2 %(1308)
50.8 %(1437)




P. multocida
2014
34.5 %(694)
53.6 %(1079)
72.1 %(1452)
77.5 %(1561)




Buchnera. sp. APS
574
50.5 %(290)
66.7 %(383)
90.9 %(522)
94.9 %(545)




R. prowazekii 
834
35.0 %(292)
51.7 %(431)
71.2 %(594)
76.5 %(638)




N. meningitidis
2025
27.2 %(551)
43.8 %(887)
58.3 %(1181)
62.6 %(1267)




H. pylori
1566
25.4 %(398)
42.7 %(668)
57.4 %(899)
63.4 %(993)




C. jejuni
1634
29.1 %(476)
50.4 %(823)
64.6 %(1056)
71.5 %(1169)




Bacteria:Firmicutes
Norf
Fasta:3D
Psi:3D
Blast:Func
Psi:Func




B. subtilis
4100
27.9 %(1143)
46.1 %(1891)
62.4 %(2557)
67.8 %(2778)




B. halodurans
4066
27.6 %(1121)
46.2 %(1880)
59.3 %(2410)
65.4 %(2660)




L lactis
2266
28.6 %(649)
49.6 %(1124)
58.3 %(1322)
66.7 %(1512)




U. urealyticum
611
27.3 %(167)
48.6 %(297)
55.5 %(339)
65.6 %(401)




M. genitalium
480
36.5 %(175)
54.8 %(263)
68.3 %(328)
75.2 %(361)




M. pneumoniae
688
26.9 %(185)
41.0 %(282)
56.7 %(390)
61.3 %(422)




M. tuberculosis
3918
26.9 %(1052)
46.4 %(1817)
50.5 %(1978)
60.9 %(2387)




Bacteria:Others
Norf
Fasta:3D
Psi:3D
Blast:Func
Psi:Func




C. trachomatis
894
30.5 %(273)
47.8 %(427)
60.2 %(538)
67.1 %(600)




C. muridarum
909
30.1 %(274)
48.1 %(437)
59.6 %(542)
67.0 %(609)




C. pneumoniae CWL029
1052
26.9 %(283)
42.8 %(450)
53.3 %(561)
60.2 %(633)




B. burgdorferi
1255
20.7 %(260)
37.5 %(471)
44.5 %(559)
51.7 %(649)




T. pallidum
1031
26.6 %(274)
42.6 %(439)
56.6 %(584)
61.1 %(630)




Synechocystis PCC6803
3167
27.5 %(872)
45.8 %(1451)
54.5 %(1727)
62.6 %(1983)




A. aeolicus
1522
32.7 %(498)
52.1 %(793)
67.3 %(1024)
73.7 %(1121)




T. maritima
1846
31.3 %(578)
49.9 %(922)
63.3 %(1169)
70.5 %(1302)




D. radiodurans
3102
25.9 %(804)
44.4 %(1378)
50.0 %(1552)
58.3 %(1810)




Archaea
Norf
Fasta:3D
Psi:3D
Blast:Func
Psi:Func




M. jannaschii
1715
22.6 %(387)
43.6 %(747)
49.0 %(840)
59.4 %(1019)




M. thermoautotrophicum
1869
24.8 %(464)
45.6 %(852)
51.0 %(953)
59.7 %(1116)




P. horikoshii
2061
20.7 %(426)
37.8 %(779)
41.3 %(852)
51.2 %(1056)




P. abyssi
1765
26.1 %(461)
48.3 %(852)
52.7 %(930)
64.9 %(1145)




T. acidophilum
1478
29.8 %(440)
50.5 %(747)
57.8 %(854)
68.3 %(1009)




A. fulgidus
2407
23.8 %(573)
44.0 %(1060)
48.5 %(1168)
58.3 %(1404)




Halobacterium sp. NRC-1
2058
24.4 %(502)
43.4 %(894)
46.7 %(961)
56.8 %(1168)




A. pernix K1
2694
14.8 %(399)
25.1 %(676)
27.1 %(731)
32.8 %(884)




Eukaryotes
Norf
Fasta:3D
Psi:3D
Blast:Func
Psi:Func




S. cerevisiae
6305
24.2 %(1528)
41.6 %(2626)
61.9 %(3903)
66.0 %(4163)




C. elegans
19730
22.1 %(4370)
38.8 %(7658)
43.8 %(8635)
54.0 %(10645)




D. melanogaster
14335
29.5 %(4222)
46.2 %(6628)
57.8 %(8291)
64.5 %(9244)




Others
Norf
Fasta:3D
Psi:3D
Blast:Func
Psi:Func




Bacteriophage T4
274
11.3 %(31)
18.6 %(51)
48.2 %(132)
50.0 %(137)




HUGE database
1771
31.2 %(553)
57.0 %(1009)
66.2 %(1172)
74.9 %(1326)