[GTOP][HELP][ORGANISMS][SEARCH][SUMMARY][COMMENT/QUESTION(gtop-admin@spock.genes.nig.ac.jp)]

Result of BLT:PDB for bp441:denV

[Show Plain Result]

#ERROR : Can't open dsspfile "2endA.bssp"
#ERROR : Can't open dsspfile "1enkA.bssp"
#ERROR : Can't open dsspfile "1enjA.bssp"
#ERROR : Can't open dsspfile "1eniA.bssp"

## Summary of PDB Search
:152
    7e-15  39%  2endA  [x.x.x] ENDONUCLEASE V
    2e-14  38%  1enkA  [x.x.x] ENDONUCLEASE V
    2e-14  38%  1enjA  [a.18.1 (1vasA)] ENDONUCLEASE V
    2e-14  38%  1eniA  [x.x.x] ENDONUCLEASE V
:152

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xTRINLEHPSLLCNAHLVGEWYENPRVASILIKKNGRTGKIPKRFTVRTNKNPDGGRGHVTFFYNKLAWL
2endA           -TRINLTLVSELADQHLMAEYRELPRVFGA-VRKHVANGKRVRDFKISPTFIL--GAGHVTFFYDKLEFL
1enkA           -TRINLTLVSELADQHLMAEYRDLPRVFGA-VRKHVANGKRVRDFKISPTFIL--GAGHVTFFYDKLEFL
1enjA           -TRINLTLVSELADQHLMAEYRQLPRVFGA-VRKHVANGKRVRDFKISPTFIL--GAGHVTFFYDKLEFL
1eniA           -TQINLTLVSELADQHLMAEYRELPRVFGA-VRKHVANGKRVRDFKISPTFIL--GAGHVTFFYDKLEFL


                         .         .         *         .         .         .         .:140
query           RDRYLMLMDEMTKRGYSPTDNWKVEIFFPEYTHLFGEWTPTEADISLSRTRIAEMIPEKxxxxxxxxxxx
2endA           RKRQIELIAECLKRGFNIKDTTVQDISIPQ--EFRGDYIPHEASIAISQARLDEKIAQR-----------
1enkA           RKRQIELIAECLKRGFNIKDTTVQDISIPQ--EFRGDYIPHEASIAISQARLDEKIAQR-----------
1enjA           RKRQIELIAECLKRGFNIKDTTVQDISIPQ--EFRGDYIPHEASIAISQARLDEKIAQR-----------
1eniA           RKRQIELIAECLKRGFNIKDTTVQDISIPQ--EFRGDYIPHEASIAISQARLDEKIAQR-----------


                         +         .         .         .         .         *         .:210
query           xxxxxxxxxxxx
2endA           ------------
1enkA           ------------
1enjA           ------------
1eniA           ------------