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Result of BLT:PDB for bpvp2:AAR97635.1

[Show Plain Result]

#ERROR : Can't open dsspfile "2cn3A.bssp"
#ERROR : Can't open dsspfile "2cn2A.bssp"
#ERROR : Can't open dsspfile "1w0oA.bssp"
#ERROR : Can't open dsspfile "1kitA.bssp"

## Summary of PDB Search
:460
    2e-05  35%  2cn3A  [x.x.x] BETA-1,4-XYLOGLUCAN HYDROLASE
    6e-04  30%  2cn2A  [x.x.x] BETA-1,4-XYLOGLUCAN HYDROLASE
    7e-04  40%  1w0oA  [b.29.1 - b.68.1 - b.29.1] SIALIDASE
    7e-04  40%  1kitA  [x.x.x] SIALIDASE
:460

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
2cn3A           ----------------------------------------------------------------------
2cn2A           ----------------------------------------------------------------------
1w0oA           ----------------------------------------------------------------------
1kitA           ----------------------------------------------------------------------


                         .         .         *         .         .         .         .:140
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
2cn3A           ----------------------------------------------------------------------
2cn2A           ----------------------------------------------------------------------
1w0oA           ----------------------------------------------------------------------
1kitA           ----------------------------------------------------------------------


                         +         .         .         .         .         *         .:210
query           xxxxxxxxxxxxxxxxxxxxxxxxxxMRSTDKGLTWSYIGNGFGTGQTSGTISAICXXXXXXXXXXXXXX
2cn3A           ----------------------------------------------------------------------
2cn2A           --------------------------LRSTDRGETWEKTILPFKGGNPGRSGERLAIDPNDNRILYLGTR
1w0oA           ----------------------------------------------------------------------
1kitA           ----------------------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           XXXXXXRSTNGGVSWTKLPDFLNSGATASAINKILHVGGNKLIALLGSGYAAVSNDLGATWSALPRWLNS
2cn3A           ------RSTDRGETWEKLPFKMGGNMPGRSMGERLAINDNRILYLCGNGLWR-STDYGVTWSKVESFPNP
2cn2A           CGNGLWRSTDYGVTWSKVESFPNPGTIIGVVDKSSSTPGNPTKTI----YVGVSTDGGVTWKAVP-----
1w0oA           ----------------------------------------------------------------------
1kitA           ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           GGSDNNTSFFDGAVTATGAIIAVGQNGFASISRNGGVTWSALPRYLGMPTNTSIVAIGVSDTAIVVGGNN
2cn3A           G-----TYIYDPNFDYTKDII--------------GVVWVVFDKSSSTPGNTKTIYVGVAD-------KN
2cn2A           ----------------------------------------------------------------------
1w0oA           ----------------------------------------------------------------------
1kitA           ----------------------------------------------------------------------


                         .         .         .         .         *         .         .:420
query           GNCAISRNDGVTWSALPLNFGVPIGSGIRDRSIAGASNGTFLVGLSGSPISGNNGYLALSYDDGVTWQQP
2cn3A           ESIYRSTDGGVTWKAVP---GQP--KGLLPHHGVLASNGMLYIGDTCGPYDGN-----------------
2cn2A           ----------------------------------------------------------------------
1w0oA           ----LSKDGGITWSLLEANNASNISTGTVDASISDGSHFLLFTNPQGNP-AGTNGRLWFSFDEGVTWKGP
1kitA           ----LSKDGGITWSLLEANNASNISTGTVDASISDGSHFLLFTNPQGNP-AGTNGRLWFSFDEGVTWKGP


                         .         .         +         .         .         .         .:490
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
2cn3A           ----------------------------------------
2cn2A           ----------------------------------------
1w0oA           ----------------------------------------
1kitA           ----------------------------------------