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Result of BLT:PDB for cglu2:BAF55730.1

[Show Plain Result]

#ERROR : Can't open dsspfile "1q7lC.bssp"
#ERROR : Can't open dsspfile "1q7lA.bssp"
#ERROR : Can't open dsspfile "3ic1B.bssp"
#ERROR : Can't open dsspfile "3ic1A.bssp"
#ERROR : Can't open dsspfile "2pokB.bssp"
#ERROR : Can't open dsspfile "2pokA.bssp"
#ERROR : Can't open dsspfile "1vgyA.bssp"
#ERROR : Can't open dsspfile "1lfwA.bssp"
#ERROR : Can't open dsspfile "2zogA.bssp"
#ERROR : Can't open dsspfile "3dljB.bssp"
#ERROR : Can't open dsspfile "3dljA.bssp"

## Summary of PDB Search
:441
    2e-11  35%  1q7lC  [c.56.5] AMINOACYLASE-1
    2e-11  35%  1q7lA  [c.56.5] AMINOACYLASE-1
    7e-09  33%  3ic1B  [x.x.x] SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE
    7e-09  33%  3ic1A  [x.x.x] SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE
    2e-07  24%  2pokB  [x.x.x] PEPTIDASE, M20/M25/M40 FAMILY
    2e-07  24%  2pokA  [x.x.x] PEPTIDASE, M20/M25/M40 FAMILY
    3e-06  31%  1vgyA  [c.56.5 - d.58.19] SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE
    3e-06  57%  1lfwA  [c.56.5 - d.58.19] PEPV
    6e-06  41%  2zogA  [x.x.x] CYTOSOLIC NON-SPECIFIC DIPEPTIDASE
    8e-06  38%  3dljB  [x.x.x] BETA-ALA-HIS DIPEPTIDASE
    8e-06  38%  3dljA  [x.x.x] BETA-ALA-HIS DIPEPTIDASE
:441

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxxDETLTLLQELIRNACVNDLTPDSGQEIRNAESLERFFEGTPNVEITKLEPRPGRTSIIVTVPGSDP
1q7lC           ------SVTLFRQYLRIRTVQP-KPDYGAAVA-------FFEETARLGCQKVEVAPGYVVTVLTWPGTNP
1q7lA           ------SVTLFRQYLRIRTVQP-KPDYGAAVA-------FFEETARLGCQKVEVAPGYVVTVLTWPGTNP
3ic1B           ----EKVVSLAQDLIRRPSISP--NDEGCQQIIAERLEKLIEWMPFNDTLNLWAKHGTSEPVIA------
3ic1A           ----EKVVSLAQDLIRRPSISP--NDEGCQQIIAERLEKLIEWMPFNDTLNLWAKHGTSEPVIA------
2pokB           -------------------------------------------------------------------SRP
2pokA           -------------------------------------------------------------------SRP
1vgyA           -----QSLELAKELISRPSV---TPDDRDCQKLAERLHKIGFAA--------EEHFGNTKNIWLRRGT--
1lfwA           ----------------------------------------------------------------------
2zogA           ------------------------------------------------------------------GSDP
3dljB           ------------------------------------------------------------VILAELGSDP
3dljA           ------------------------------------------------------------VILAELGSDP


                         .         .         *         .         .         .         .:140
query           NAEPLTLLGHTDVVPVDLPKWTKDPFGAEISDGQIWGRGSVDMLFIXXXXXXXXXXXXXEGGLRGTLTFV
1q7lC           TLSSILLNSHTDVVPVFKEHWSHDPFEAKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGRFPRTIHMT
1q7lA           TLSSILLNSHTDVVPVFKEHWSHDPFEAKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGRFPRTIHMT
3ic1B           ------FAGHTDVVPTDENQWSSPPFSAEIIDGMLYGRGAADMKSLAAMIVAAEEYVKANPNHKGTIALL
3ic1A           ------FAGHTDVVPTDENQWSSPPFSAEIIDGMLYGRGAADMKSLAAMIVAAEEYVKANPNHKGTIALL
2pokB           DAKTLIFYNHYDTVPADGDQWTEDPFTLSVRNGFMYGRGDDDKGHITARLSALRKYMQHHDDLPVNISFI
2pokA           DAKTLIFYNHYDTVPADGDQWTEDPFTLSVRNGFMYGRGDDDKGHITARLSALRKYMQHHDDLPVNISFI
1vgyA           KAPVVCFAGHTDVVPTGVEKWDSPPFEPAERDGRLYGRGAADKTSIACFVTACERFVAKHPNHQGSIALL
1lfwA           ----LGIIGHMDVVPAG-EGWTRDPFKMEIEEGRIYGRGSAD----------------------------
2zogA           QKKTVCIYGHLDVQPAALEDWDSEPFTLVEREGKLYGRGSTD----------------------------
3dljB           TKGTVCFYGHLDVQPADRGDWLTDPYVLTEVDGKLYGRGATD----------------------------
3dljA           TKGTVCFYGHLDVQPADRGDWLTDPYVLTEVDGKLYGRGATD----------------------------


                         +         .         .         .         .         *         .:210
query           GVADEEARGGLGAKWLSEEHQNLFSWKNCLSESGGSHLPVHDGSDAVVINVGEKGAAQRRIHVNGDAGHG
1q7lC           FVPDEEVGGHQG----------------------------------------------------------
1q7lA           FVPDEEVGGHQG----------------------------------------------------------
3ic1B           ITSDEEA---------------------------------------------------------------
3ic1A           ITSDEEA---------------------------------------------------------------
2pokB           MEGAEESASTDLDKYLEKHADKLRGADLLVWEQGTKNLEISGGNKGIVTFDAKVKSADVDIH----SSYG
2pokA           MEGAEESASTDLDKYLEKHADKLRGADLLVWEQGTKNLEISGGNKGIVTFDAKVKSADVDIH----SSYG
1vgyA           ITSDEE----------------------------------------------------------------
1lfwA           ----------------------------------------------------------------------
2zogA           ----------------------------------------------------------------------
3dljB           ----------------------------------------------------------------------
3dljA           ----------------------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           SIPFDRDSAIVKIGEVARRIAAADLKVAKDDIWQGFVQAHRFDPETEQALLSGTSPEAYAEFGGLSRFAH
1q7lC           ----------------------------------------------------------------------
1q7lA           ----------------------------------------------------------------------
3ic1B           ----------------------------------------------------------------------
3ic1A           ----------------------------------------------------------------------
2pokB           GVV---ESAPWYLLQALQSLRAADGRILVEGLYEEVQEPN----EREMALLGQRNPEEVSRIYGLELFFD
2pokA           GVV---ESAPWYLLQALQSLRAADGRILVEGLYEEVQEPN----EREMALLGQRNPEEVSRIYGLELFFD
1vgyA           ----------------------------------------------------------------------
1lfwA           ----------------------------------------------------------------------
2zogA           ----------------------------------------------------------------------
3dljB           ----------------------------------------------------------------------
3dljA           ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           AVSHLTIAQTVVRAGQAINVLPSHAYLELDIRTLPGQTNDYVDDTLRGALGDLADEVEIEHLISEEATVS
1q7lC           ----------------------------------------------------------------------
1q7lA           ----------------------------------------------------------------------
3ic1B           ----------------------------------------------------------------------
3ic1A           ----------------------------------------------------------------------
2pokB           PALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGDKVELYYTLGEMSYRS
2pokA           PALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGDKVELYYTLGEMSYRS
1vgyA           ----------------------------------------------------------------------
1lfwA           ----------------------------------------------------------------------
2zogA           ----------------------------------------------------------------------
3dljB           ----------------------------------------------------------------------
3dljA           ----------------------------------------------------------------------


                         .         .         .         .         *         .         .:420
query           PTDSRLYNTLEKVLGDFFPDAPVVPIISSGGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1q7lC           ----------------------------------------------------------------------
1q7lA           ----------------------------------------------------------------------
3ic1B           ----------------------------------------------------------------------
3ic1A           ----------------------------------------------------------------------
2pokB           DMSAPAILNVIELAKKFYPQVSVLPTTAGTG---------------------------------------
2pokA           DMSAPAILNVIELAKKFYPQVSVLPTTAGTG---------------------------------------
1vgyA           ----------------------------------------------------------------------
1lfwA           ----------------------------------------------------------------------
2zogA           ----------------------------------------------------------------------
3dljB           ----------------------------------------------------------------------
3dljA           ----------------------------------------------------------------------


                         .         .         +         .         .         .         .:490
query           xxxxxxxxxxxxxxxxxxxxx
1q7lC           ---------------------
1q7lA           ---------------------
3ic1B           ---------------------
3ic1A           ---------------------
2pokB           ---------------------
2pokA           ---------------------
1vgyA           ---------------------
1lfwA           ---------------------
2zogA           ---------------------
3dljB           ---------------------
3dljA           ---------------------