[GTOP][HELP][ORGANISMS][SEARCH][SUMMARY][COMMENT/QUESTION(gtop-admin@spock.genes.nig.ac.jp)]

Result of RPS:SCP for cglu2:BAF54728.1

[Show Plain Result]

#ERROR : Can't open dsspfile "1mq7A.bssp"
#ERROR : Can't open dsspfile "1dudA.bssp"
#ERROR : Can't open dsspfile "1ducA.bssp"
#ERROR : Can't open dsspfile "1vyqA1.bssp"
#ERROR : Can't open dsspfile "2bsyA2.bssp"
#ERROR : Can't open dsspfile "1oghA.bssp"
#ERROR : Can't open dsspfile "2bsyA1.bssp"
#ERROR : Can't open dsspfile "1xs1A.bssp"

## Summary of PDB Search
:149
    9e-34  69%  1mq7A  [b.85.4.1] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
    9e-28  37%  1dudA  [b.85.4.1] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
    2e-25  30%  1ducA  [b.85.4.1] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEODITOHYDROLASE
    4e-25  34%  1vyqA1 [b.85.4.1] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
    3e-24  20%  2bsyA2 [b.85.4.1] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
    1e-23  23%  1oghA  [b.85.4.1] BIFUNCTIONAL DEAMINASE/DIPHOSPHATASE
    7e-23  16%  2bsyA1 [b.85.4.1] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
    5e-16  28%  1xs1A  [b.85.4.1] DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE
:149

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxxxxIKIVRLDKELPLPKRAHRGDAGVDLHATTDAVIAPGHREIVGTGIAIALPLGTVGLVHPRSGLA
1mq7A           ------LAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLA
1dudA           ------ILDPRVGKEFPLPTYATSGSAGLDLRACLNDELAPGDTTLVPTGLAIHIAPSLAAMMLPRSGLG
1ducA           -----------LAYQGTQIKEKRDEDAGFDLCVPYDIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMA
1vyqA1          ------LKIVCLSDEEMYKNHKTHHDSGLDLFIVKDEVLKPKSTTFVKLGIKAYYIVNTSFLLFPRSSI-
2bsyA2          ----------------PINHPQYPGDVGLDVSLPKDLALFPHQTVSVTLTVPPPSIPHHRPTIFGRSGL-
1oghA           ------KRIKIKNSILVCPLNYNLTEEKINYFKEKYNVYVVEGGVLGTTNEYIELPNDISAQYQGRSSL-
2bsyA1          ---------IRYAFQNDKLLLQQASVGRLTLVNKTTILLRPMKTTTVDLGLYARPPEGHGLMLWGSTSRP
1xs1A           -------------------------------------YLHPGELALAVTLESVTLPADLVGWLDGRSSLA


                         .         .         *         .         .         .         .:140
query           AREGLSIVNAPGTIDADYRGEIKVCLINLDPEKPIMITRGDRIAQLVIQKXXXXXXXXXXXXXXTVRGDQ
1mq7A           TRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQR--------------------
1dudA           HKHGIVLGNLVGLIDSDYQGQLMISVWNRGQD-SFTIQPGERIAQMIFVP--------------------
1ducA           KQ---GLLINGGIIDEGYTGEIQVICTNI-GKSNIKLIEGQKFAQLIILQ--------------------
1vyqA1          SKTPLRLANSIGLIDAGYRGEIIAALDNTSDQ-EYHIKKNDKLVQLVSFT--------------------
2bsyA2          AMQGILV-----KPCRWRRGGVDVSLTNF-SDQTVFLNKYRRFCQLVYLH-----KHHLTSFYSPHSDAG
1oghA           GRVFLTSHQTAGWIDAGFKGKITLEIVA--FDKPVILYKNQRIGQLIFSK--------------------
2bsyA1          ------VTSHVGIIDPGYTGELRLILQNQRRY-NSTLRPSELKIHLAAFR--------------------
1xs1A           -RLGLMVHVTAHRIDPGWSGCIVLEFYNSGKL-PLALRPGMLIGALSFEP--------------------


                         +         .         .         .         .         *         .:210
query           GYGSTGKTx
1mq7A           ---------
1dudA           ---------
1ducA           ---------
1vyqA1          ---------
2bsyA2          VLGPRSLF-
1oghA           ---------
2bsyA1          ---------
1xs1A           ---------