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Result of RPS:PDB for cimm2:CIRT_00384

[Show Plain Result]

#ERROR : Can't open dsspfile "1cvjC.bssp"
#ERROR : Can't open dsspfile "3dedA.bssp"
#ERROR : Can't open dsspfile "1cvjF.bssp"
#ERROR : Can't open dsspfile "2dgqA.bssp"
#ERROR : Can't open dsspfile "1cvjD.bssp"
#ERROR : Can't open dsspfile "3dedC.bssp"
#ERROR : Can't open dsspfile "1b7fA.bssp"
#ERROR : Can't open dsspfile "2cpzA.bssp"
#ERROR : Can't open dsspfile "1a9nB.bssp"
#ERROR : Can't open dsspfile "2dhxA.bssp"
#ERROR : Can't open dsspfile "2cqcA.bssp"
#ERROR : Can't open dsspfile "3b4mD.bssp"
#ERROR : Can't open dsspfile "2dh7A.bssp"
#ERROR : Can't open dsspfile "2cjkA.bssp"
#ERROR : Can't open dsspfile "2a3jA.bssp"
#ERROR : Can't open dsspfile "2e5iA.bssp"
#ERROR : Can't open dsspfile "2cphA.bssp"
#ERROR : Can't open dsspfile "2ek6A.bssp"
#ERROR : Can't open dsspfile "2dhaA.bssp"
#ERROR : Can't open dsspfile "2dnlA.bssp"
#ERROR : Can't open dsspfile "2dgpA.bssp"
#ERROR : Can't open dsspfile "1cx0A.bssp"
#ERROR : Can't open dsspfile "2cq0A.bssp"
#ERROR : Can't open dsspfile "3culA.bssp"
#ERROR : Can't open dsspfile "3ctrA.bssp"
#ERROR : Can't open dsspfile "3d45A.bssp"
#ERROR : Can't open dsspfile "2e5hA.bssp"
#ERROR : Can't open dsspfile "2dgxA.bssp"
#ERROR : Can't open dsspfile "2dk2A.bssp"
#ERROR : Can't open dsspfile "1audA.bssp"
#ERROR : Can't open dsspfile "1drzA.bssp"
#ERROR : Can't open dsspfile "1cvjB.bssp"
#ERROR : Can't open dsspfile "2adbA.bssp"
#ERROR : Can't open dsspfile "2disA.bssp"
#ERROR : Can't open dsspfile "3egnA.bssp"
#ERROR : Can't open dsspfile "1cvjA.bssp"
#ERROR : Can't open dsspfile "2cpxA.bssp"
#ERROR : Can't open dsspfile "2cpyA.bssp"
#ERROR : Can't open dsspfile "3d45B.bssp"
#ERROR : Can't open dsspfile "2do4A.bssp"
#ERROR : Can't open dsspfile "2dnkA.bssp"
#ERROR : Can't open dsspfile "2dgoA.bssp"
#ERROR : Can't open dsspfile "2cpfA.bssp"
#ERROR : Can't open dsspfile "1a9nD.bssp"
#ERROR : Can't open dsspfile "1cvjH.bssp"
#ERROR : Can't open dsspfile "2cqdA.bssp"
#ERROR : Can't open dsspfile "2cqgA.bssp"
#ERROR : Can't open dsspfile "2cqbA.bssp"
#ERROR : Can't open dsspfile "3cunA.bssp"
#ERROR : Can't open dsspfile "1cvjG.bssp"
#ERROR : Can't open dsspfile "2cq4A.bssp"
#ERROR : Can't open dsspfile "3b4dA.bssp"
#ERROR : Can't open dsspfile "2dnnA.bssp"
#ERROR : Can't open dsspfile "2dnyA.bssp"
#ERROR : Can't open dsspfile "2dnpA.bssp"
#ERROR : Can't open dsspfile "2dnzA.bssp"

## Summary of PDB Search
:406
    1e-08  23%  1cvjC  [d.58.7 - d.58.7] POLYDENYLATE BINDING PROTEIN 1
    2e-08  10%  3dedA  [x.x.x] PROBABLE HEMOLYSIN
    3e-08  23%  1cvjF  [d.58.7 - d.58.7] POLYDENYLATE BINDING PROTEIN 1
    6e-08  16%  2dgqA  [x.x.x] BRUNO-LIKE 6, RNA BINDING PROTEIN
    2e-07  19%  1cvjD  [d.58.7 - d.58.7] POLYDENYLATE BINDING PROTEIN 1
    3e-07  10%  3dedC  [x.x.x] PROBABLE HEMOLYSIN
    2e-06  20%  1b7fA  [d.58.7 - d.58.7] PROTEIN (SXL-LETHAL PROTEIN)
    3e-06  20%  2cpzA  [x.x.x] CUG TRIPLET REPEAT RNA-BINDING PROTEIN 1
    3e-06  20%  1a9nB  [d.58.7] SPLICEOSOMAL U2B''
    5e-06   9%  2dhxA  [x.x.x] POLY (ADP-RIBOSE) POLYMERASE FAMILY, MEMBER 10
    5e-06  24%  2cqcA  [x.x.x] ARGININE/SERINE-RICH SPLICING FACTOR 10
    5e-06  23%  3b4mD  [x.x.x] POLYADENYLATE-BINDING PROTEIN 2
    6e-06  22%  2dh7A  [x.x.x] NUCLEOLYSIN TIAR
    9e-06  25%  2cjkA  [x.x.x] NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 4
    1e-05  13%  2a3jA  [x.x.x] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
    1e-05  22%  2e5iA  [x.x.x] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN L-LIKE
    1e-05  19%  2cphA  [x.x.x] RNA BINDING MOTIF PROTEIN 19
    2e-05  22%  2ek6A  [x.x.x] RNA-BINDING PROTEIN 12
    3e-05  14%  2dhaA  [x.x.x] FLJ20171 PROTEIN
    3e-05  18%  2dnlA  [x.x.x] CYTOPLASMIC POLYADENYLATION ELEMENT BINDING
    3e-05  17%  2dgpA  [x.x.x] BRUNO-LIKE 4, RNA BINDING PROTEIN
    3e-05  20%  1cx0A  [d.58.7] U1A PROTEIN
    3e-05  19%  2cq0A  [x.x.x] EUKARYOTIC TRANSLATION INITIATION FACTOR 3
    3e-05  23%  3culA  [x.x.x] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
    4e-05   8%  3ctrA  [x.x.x] POLY(A)-SPECIFIC RIBONUCLEASE PARN
    4e-05  10%  3d45A  [x.x.x] POLY(A)-SPECIFIC RIBONUCLEASE PARN
    4e-05  25%  2e5hA  [x.x.x] ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-
    4e-05  15%  2dgxA  [x.x.x] KIAA0430 PROTEIN
    5e-05  19%  2dk2A  [x.x.x] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN R
    5e-05  18%  1audA  [d.58.7] U1A 102
    7e-05  20%  1drzA  [d.58.7] PROTEIN (U1 SMALL RIBONUCLEOPROTEIN A)
    8e-05  23%  1cvjB  [d.58.7 - d.58.7] POLYDENYLATE BINDING PROTEIN 1
    9e-05  11%  2adbA  [x.x.x] POLYPYRIMIDINE TRACT-BINDING PROTEIN 1
    9e-05  21%  2disA  [x.x.x] UNNAMED PROTEIN PRODUCT
    1e-04  16%  3egnA  [x.x.x] RNA-BINDING PROTEIN 40
    1e-04  20%  1cvjA  [d.58.7 - d.58.7] POLYDENYLATE BINDING PROTEIN 1
    1e-04  17%  2cpxA  [x.x.x] HYPOTHETICAL PROTEIN FLJ11016
    1e-04  15%  2cpyA  [x.x.x] RNA-BINDING PROTEIN 12
    1e-04  13%  3d45B  [x.x.x] POLY(A)-SPECIFIC RIBONUCLEASE PARN
    2e-04  24%  2do4A  [x.x.x] SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNIZED BY T-
    2e-04  19%  2dnkA  [x.x.x] BRUNO-LIKE 4, RNA BINDING PROTEIN
    2e-04  21%  2dgoA  [x.x.x] CYTOTOXIC GRANULE-ASSOCIATED RNA BINDING PROTEIN
    2e-04  22%  2cpfA  [x.x.x] RNA BINDING MOTIF PROTEIN 19
    2e-04  20%  1a9nD  [d.58.7] SPLICEOSOMAL U2B''
    2e-04  24%  1cvjH  [d.58.7 - d.58.7] POLYDENYLATE BINDING PROTEIN 1
    3e-04  21%  2cqdA  [x.x.x] RNA-BINDING REGION CONTAINING PROTEIN 1
    3e-04  24%  2cqgA  [x.x.x] TAR DNA-BINDING PROTEIN-43
    4e-04  25%  2cqbA  [x.x.x] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E
    5e-04  21%  3cunA  [x.x.x] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
    7e-04  19%  1cvjG  [d.58.7 - d.58.7] POLYDENYLATE BINDING PROTEIN 1
    8e-04  17%  2cq4A  [x.x.x] RNA BINDING MOTIF PROTEIN 23
    8e-04  23%  3b4dA  [x.x.x] POLYADENYLATE-BINDING PROTEIN 2
    8e-04  16%  2dnnA  [x.x.x] RNA-BINDING PROTEIN 12
    8e-04  17%  2dnyA  [x.x.x] FUSE-BINDING PROTEIN-INTERACTING REPRESSOR,
    8e-04  19%  2dnpA  [x.x.x] RNA-BINDING PROTEIN 14
    0.001  28%  2dnzA  [x.x.x] PROBABLE RNA-BINDING PROTEIN 23
:406

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1cvjC           ----------------------------------------------------------------------
3dedA           ----------------------------------------------------------------------
1cvjF           ----------------------------------------------------------------------
2dgqA           ----------------------------------------------------------------------
1cvjD           ----------------------------------------------------------------------
3dedC           ----------------------------------------------------------------------
1b7fA           ----------------------------------------------------------------------
2cpzA           ----------------------------------------------------------------------
1a9nB           ----------------------------------------------------------------------
2dhxA           ----------------------------------------------------------------------
2cqcA           ----------------------------------------------------------------------
3b4mD           ----------------------------------------------------------------------
2dh7A           ----------------------------------------------------------------------
2cjkA           ----------------------------------------------------------------------
2a3jA           ----------------------------------------------------------------------
2e5iA           ----------------------------------------------------------------------
2cphA           ----------------------------------------------------------------------
2ek6A           ----------------------------------------------------------------------
2dhaA           ----------------------------------------------------------------------
2dnlA           ----------------------------------------------------------------------
2dgpA           ----------------------------------------------------------------------
1cx0A           ----------------------------------------------------------------------
2cq0A           ----------------------------------------------------------------------
3culA           ----------------------------------------------------------------------
3ctrA           ----------------------------------------------------------------------
3d45A           ----------------------------------------------------------------------
2e5hA           ----------------------------------------------------------------------
2dgxA           ----------------------------------------------------------------------
2dk2A           ----------------------------------------------------------------------
1audA           ----------------------------------------------------------------------
1drzA           ----------------------------------------------------------------------
1cvjB           ----------------------------------------------------------------------
2adbA           ----------------------------------------------------------------------
2disA           ----------------------------------------------------------------------
3egnA           ----------------------------------------------------------------------
1cvjA           ----------------------------------------------------------------------
2cpxA           ----------------------------------------------------------------------
2cpyA           ----------------------------------------------------------------------
3d45B           ----------------------------------------------------------------------
2do4A           ----------------------------------------------------------------------
2dnkA           ----------------------------------------------------------------------
2dgoA           ----------------------------------------------------------------------
2cpfA           ----------------------------------------------------------------------
1a9nD           ----------------------------------------------------------------------
1cvjH           ----------------------------------------------------------------------
2cqdA           ----------------------------------------------------------------------
2cqgA           ----------------------------------------------------------------------
2cqbA           ----------------------------------------------------------------------
3cunA           ----------------------------------------------------------------------
1cvjG           ----------------------------------------------------------------------
2cq4A           ----------------------------------------------------------------------
3b4dA           ----------------------------------------------------------------------
2dnnA           ----------------------------------------------------------------------
2dnyA           ----------------------------------------------------------------------
2dnpA           ----------------------------------------------------------------------
2dnzA           ----------------------------------------------------------------------


                         .         .         *         .         .         .         .:140
query           xxxxxxxxxxxxxxxQVPQQGVKRKESPTDRPTDPDATSALYISDLYWWTTDDEIRGWINATGCEGELKD
1cvjC           --------------------------------------ASLYVGDLHPDVTEAMLYEKFSPAG---PILS
3dedA           -------------------EIVQREDGSWLVDGVSLDRF-REFFELEAPLPGEAGGNIHTLAGVLYQLGR
1cvjF           --------------------------------------ASLYVGDLHPDVTEAMLYEKFS---PAGPILS
2dgqA           --------------------------GSSGVPMKDHDAIKLFVGQIPRGLDEQDLKPLF---EEFGRIYE
1cvjD           --------------------------------------ASLYVGDLHPDVTEAMLYEKF---SPAGPILS
3dedC           ----------------------VQREDGSWLVDGVSLDRFREFFELEAPLPGEAGGNIHTLAGVLYQLGR
1b7fA           ------------------------------------SNTNLIVNYLPQDMTDRELY---ALFRAIGPINT
2cpzA           ----------------------QQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMF---MPFGNVVS
1a9nB           -------------------------------------NHTIYINNMNDKIKKEELKRSLYALF--SQFGH
2dhxA           ----------------------------------------VEVRGLPPAVPDELLTLYFENRR------R
2cqcA           --------------------------GSSGNRANPDPNCCLGVFGLSLYTTERDLR---EVFSKYGPIAD
3b4mD           ----------------------------------------IYVGNVDYGATAEELEAHFHGCGSV---NR
2dh7A           --------------------------GSSGQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGK---ISD
2cjkA           ----------------------------------------MFIGGLNWDTTEDNLREYFGKYGTV---TD
2a3jA           -------------------------------PPHTEPSQVVLITNINPEVPKEKLQALLYAASSQGDILD
2e5iA           -----------------------TRPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCNPVGK------
2cphA           --------------------------GSSGQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKT--V
2ek6A           --------------------------------------TVIKVQNMPFTVSIDEILDFF---YGYQVIPG
2dhaA           ------------------------------QFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKE
2dnlA           -------------------------------SSGSSGSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWP
2dgpA           --------------------------SSGSSGMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGK---IYE
1cx0A           ---------------------------------ETRPNHTIYINNLNEKIKKDELKKSLHAIFSR---FG
2cq0A           --------------------------GSSGPNRRADDNATIRVTNLSEDTRETDLQELF---RPFGSISR
3culA           --------------------------------TRPNHT--IYINNLNEKIKKDELKKSLH---AIFSRFG
3ctrA           ----------------------------------PLGSDHVLHVTFPKEWKTSDLYQLFSAFGN------
3d45A           ---------------LFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGN------
2e5hA           -----------------------------------PSKSTVYVSNLPFSLTNNDLYRI---FSKYGKVVK
2dgxA           -------------------------------SGSSGNGADVQVSNIDYRLSRKELQQLLQEAF--ARHGK
2dk2A           --------------------------GSSGDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGK------
1audA           -------------------------------VPETRPNHTIYINNLNEKIKKDELKKSL--HAIFSRFGQ
1drzA           ---------------------------------ETRPNHTIYINNLNEKIKKDELKKSLHAIFSR---FG
1cvjB           --------------------------------------ASLYVGDLHPDVTEAMLY---EKFSPAGPILS
2adbA           -----------------------------MAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGT------
2disA           -------------------------------SSGSSGNCRLFIGGIPKMKKREEILEEIAKVTEGVLDVI
3egnA           ----------------------METLSVFRSYEPGEPNCRIYVKNLAKHVQEKDLKYIFGRYVDFSSETQ
1cvjA           --------------------------------------ASLYVGDLHPDVTEAMLYEKFSPAGP---ILS
2cpxA           ---------------------EIRKIPMFSSYNPGEPNKVLYLKNLSPRVTERDLVSLFARFQEK---KG
2cpyA           --------------------------GSSGEGDVNSAKVCAHITNIPFSITKMDVL---QFLEGIPVDEN
3d45B           --------------------------LNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFG-------
2do4A           -----------------------SGSSGVFRYSTSLEKHKLFISGLPFSCTKEELEEICKAHGTVKDLRL
2dnkA           --------------------------GSSGCLRQPPSHRKLFVGMLNKQQSEDDVRRLFE---AFGNIEE
2dgoA           --------------------------GSSGQKKDTSNHFHVFVGDLSPEITTEDIKAAFA---PFGRISD
2cpfA           ----------------------------------------LFIKNLNFSTTEETLKGVFSKVGAIKSCTI
1a9nD           -------------------------------------NHTIYINNMNDKIKKEELKRSLYALF--SQFGH
1cvjH           --------------------------------------ASLYVGDLHPDVTEAMLYEKFSPAGPI---LS
2cqdA           ----------------------------------DTTFTKIFVGGLPYHTTDASLRKY---FEGFGDIEE
2cqgA           --------------------------GSSGVKRAVQKTSDLIVLGLPWKTTEQDLKEYFS---TFGEVLM
2cqbA           ------------------------------SSGMATTKRVLYVGGLAEEVDDKVLHAAFIPFGD---ITD
3cunA           ----------------------------------------IYINNLNEKIKKDELKKSLH---AIFSRFG
1cvjG           --------------------------------------ASLYVGDLHPDVTEAMLYEKFSPAGPI---LS
2cq4A           -----------------SSGKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFF---SAVGKVRD
3b4dA           ----------------------------------------IYVGNVDYGATAEELEAH---FHGCGSVNR
2dnnA           --------------------------SSGKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRV-----D
2dnyA           -----------------------------KQESTVMVLRNMVDPKDIDDDLEGEVT---EECGKFGAVNR
2dnpA           -------------------------------SGSSGNTWKIFVGNVSAACTSQELRSLFE----------
2dnzA           -------------------------------------SSGLYVGSLHFNITEDMLRGIFEPFGKI---DN


                         +         .         .         .         .         *         .:210
query           VTFSEHKVNGKSKGQAFVEFTSPQAATAAKHQIESLNAAQQSARKYSVNYTQPHTNPFRTLPKDNPMRGK
1cvjC           IRVCRDMITRRSLGYAYVNFQQPADAERALD---------------------------------------
3dedA           VPS--VTDRFEWNGFSFEVVDDRTRVDKI---LVQRH---------------------------------
1cvjF           IRVCRDMITRRSLGYAYVNFQQPADAERALDT--------------------------------------
2dgqA           LTVLKDRLTGLHKGCAFLTYCARDSALKA---QSALH---------------------------------
1cvjD           IRVCRDMITRRSLGYAYVNFQQPADAERA---LDTMNFDVIKGKPVRIMWSQRDPSLRK-----------
3dedC           VPS--VTDRFEWNGFSFEVVDDRTRVDKILVQ--------------------------------------
1b7fA           CRIMRDYKTGYSYGYAFVDFTSEMDSQRA---IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPR
2cpzA           AKVFIDKQTNLSKCFGFVSYDNPVSAQAA---IQSMNGFQIGMKRLKVQLKRS-----------------
1a9nB           VVDIVALKTMKMRGQAFVIFKELGSSTNA---LRQLQGFPFYGKPMRIQYAKT-----------------
2dhxA           SGGGPVLSWQRLGCGGVLTFREPADAERV---LAQAD---------------------------------
2cqcA           VSIVYDQQSRRSRGFAFVYFENVDDAKEA---KERANGMELDGRRIRVSGPS------------------
3b4mD           VTILCDKFSGHPKGFAYIEFSDKESVRTS-----------------------------------------
2dh7A           ARVVKDMATGKSKGYGFVSFYNKLDAENA---IVHMGGQWLGGRQIRTNWATR-----------------
2cjkA           LKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT--------------------------------------
2a3jA           IVVD---LSDDNSGKAYIVFATQESAQAF---VEAFQGYPFQGNPLVITFSET-----------------
2e5iA           --VQRIVIFKRNGIQAMVEFESVLCAQKA---KAALNGADIYAGCCTLKIEYARP------TRLNVIRND
2cphA           RLPKKMTGTGAHRGFGFVDFITKQDAKKAFNA--------------------------------------
2ek6A           SVCLKYNEKGMPTGEAMVAFESRDEATAA---VIDLNDRPIGSRKVKLSG--------------------
2dhaA           GILFVTYPDGRPTGDAFVLFACEEYAQNAL----RKHKDLLGKRYIELFRSTA--------AEVQQVLNR
2dnlA           -HKAESKSYFPPKGYAFLLFQEESSVQAL---IDACL-EEDGKLYLCVSSPTIKDKPVQIRPW-NLSDSD
2dgpA           LTVLKDRFTGMHKGCAFLTYCERESALKA---QSALH---------------------------------
1cx0A           QILDILVSRSLKRGQAFVIFKEVSSATNA---LRSQGFPFYDKPRIQYAKTDS-----------------
2cq0A           IYLAKDKTTGQSKGFAFISFHRREDAARA---IAGVSGFGYDHLILNVEWAKP-----------------
3culA           QILDILVSRSLKRGQAFVIFKEVSSATNA---LRSQGFPFYDKPRIQYAKTDS-----------------
3ctrA           --IQISWIDDTSAFVSLSQPEQVKIAVNTSKY--------------------------------------
3d45A           -----IQISWIDDTSAFVSLSQPEQVQIA---VNTSK---------------------------------
2e5hA           VTIMKDKDTRKSKGVAFILFLDKDSAQNC---TRAINNKQLFGRVIKASI--------------------
2dgxA           VKSVELSPHTDYQLKAVVQMENLQDAIGA---VNSLHRYKIGSKKILVSLATG-----------------
2dk2A           -----LERVKKLKDYAFVHFEDRGAAVKA---MDEMNGKEIEGEEIEIVLAKP-----------------
1audA           ILDILVSRSLKMRGQAFVIFKEVSSATNA---LRSMQGFPFYDKPMRIQYAKTDSDIIAKMKG-------
1drzA           QILDILVSRSLKRGQAFVIFKEVSSATNA---LRSQGFPFYDKPRIQYAKTDS-----------------
1cvjB           IRVCRDMITRRSLGYAYVNFQQPADAERALDT--------------------------------------
2adbA           -VLKIITFTKNNQFQALLQYADPVSAQHA---KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKS---
2disA           VYASAAD-KMKNRGFAFVEYESHRAAAMA---RRKLMPGQLWGHQIAVDWAEPEIDVDEDVMETVS----
3egnA           RIDIRLMKEGRMKGQAFIGLPNEKAAAKA-----------------------------------------
1cvjA           IRVCRDMITRRSLGYAYVNFQQPADAERA---LDTMNFDVIKGKPVRIMWSQR-----------------
2cpxA           PPIQFRMMTGRMRGQAFITFPNKEIAWQA---LHLVNGYKLYGKILVIEFGKN-----------------
2cpyA           AVHVLVDNNGQGLGQALVQFKNEDDARKSERL--------------------------------------
3d45B           ----NIQISWIDDTSAFVSLSQPEQVQIA---VNTSKYAE------------------------------
2do4A           VTNRAG----KPKGLAYVEYENESQASQA---VMKMDGMTIKENIIKVAISNS-----------------
2dnkA           C-TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADT-----------------
2dgoA           ARVVKDMATGKSKGYGFVSFFNKWDAENA---IQQMGGQWLGGRQIRTNWATRKP------PAPKSTYES
2cpfA           SKKKNKAGVLLSMGFGFVEYKKPEQAQKA---LKQLQGHTVDGHKLEVRISER-----------------
1a9nD           VVDIVALKTMKMRGQAFVIFKELGSSTNA---LRQLQGFPFYGKPMRIQYAKT-----------------
1cvjH           IRVCRDMITRRSLGYAYVNFQQPADAERA---LDTMN---------------------------------
2cqdA           AVVITDRQTGKSRGYGFVTMADRAAAERA---CKDPNPIIDG-RKANVNLAYLGAKPRSLQTGFAIGVS-
2cqgA           VQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMID---------------------------------
2cqbA           IQIPLDYETEKHRGFAFVEFELAEDAAAA---IDNMNESELFGRTIRVNLAKP-----------------
3cunA           QILDILVSRSLKRGQAFVIFKEVSSATNA---LRSQGFPFYDKPRIQYAKTDS-----------------
1cvjG           IRVCRDMITRRSLGYAYVNFQQPADAERA---LDTMNFDVIKGKPVRIMWSQRDPSLRK-----------
2cq4A           VRIISDRNSRRSKGIAYVEFCEIQSVPLAI----GLTGQRLLGVPIIVQASQA-----------------
3b4dA           VTILCDKFSGHPKGFAYIEFSDKESVRTS-----------------------------------------
2dnnA           AVHLLKDHVGRNNGNGLVKFLSPQDTFEAL----KRNRMLMIQRYVEVSPATE--------RQWVAAGGH
2dnyA           VIIYQEKQGAEIIVKIFVEFSIASETHKA---IQALNGRWFAGRKVVAEVYD---------QERFDNSDL
2dnpA           -RRGRVIECDVVKDYAFVHMEKEADAKAA---IAQLNGKEVKGKRINVELSTK-----------------
2dnzA           IVLMKDSDTGRSKGYGFITFSDSECARRA---LEQLNGFELAGRPMRVGHVTE-----------------


                         .         .         .         +         .         .         .:280
query           DDRSRSSSAGFNSPVQGMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1cvjC           ----------------------------------------------------------------------
3dedA           ----------------------------------------------------------------------
1cvjF           ----------------------------------------------------------------------
2dgqA           ----------------------------------------------------------------------
1cvjD           ----------------------------------------------------------------------
3dedC           ----------------------------------------------------------------------
1b7fA           TITDDQLDTIFGKYGSIV----------------------------------------------------
2cpzA           ----------------------------------------------------------------------
1a9nB           ----------------------------------------------------------------------
2dhxA           ----------------------------------------------------------------------
2cqcA           ----------------------------------------------------------------------
3b4mD           ----------------------------------------------------------------------
2dh7A           ----------------------------------------------------------------------
2cjkA           ----------------------------------------------------------------------
2a3jA           ----------------------------------------------------------------------
2e5iA           NDSWDYTK--------------------------------------------------------------
2cphA           ----------------------------------------------------------------------
2ek6A           ----------------------------------------------------------------------
2dhaA           FSSASGPSSG------------------------------------------------------------
2dnlA           FVMDSGPSSG------------------------------------------------------------
2dgpA           ----------------------------------------------------------------------
1cx0A           ----------------------------------------------------------------------
2cq0A           ----------------------------------------------------------------------
3culA           ----------------------------------------------------------------------
3ctrA           ----------------------------------------------------------------------
3d45A           ----------------------------------------------------------------------
2e5hA           ----------------------------------------------------------------------
2dgxA           ----------------------------------------------------------------------
2dk2A           ----------------------------------------------------------------------
1audA           ----------------------------------------------------------------------
1drzA           ----------------------------------------------------------------------
1cvjB           ----------------------------------------------------------------------
2adbA           ----------------------------------------------------------------------
2disA           ----------------------------------------------------------------------
3egnA           ----------------------------------------------------------------------
1cvjA           ----------------------------------------------------------------------
2cpxA           ----------------------------------------------------------------------
2cpyA           ----------------------------------------------------------------------
3d45B           ----------------------------------------------------------------------
2do4A           ----------------------------------------------------------------------
2dnkA           ----------------------------------------------------------------------
2dgoA           NTKQSGPSSG------------------------------------------------------------
2cpfA           ----------------------------------------------------------------------
1a9nD           ----------------------------------------------------------------------
1cvjH           ----------------------------------------------------------------------
2cqdA           ----------------------------------------------------------------------
2cqgA           ----------------------------------------------------------------------
2cqbA           ----------------------------------------------------------------------
3cunA           ----------------------------------------------------------------------
1cvjG           ----------------------------------------------------------------------
2cq4A           ----------------------------------------------------------------------
3b4dA           ----------------------------------------------------------------------
2dnnA           ITSGPSS---------------------------------------------------------------
2dnyA           SASGPSS---------------------------------------------------------------
2dnpA           ----------------------------------------------------------------------
2dnzA           ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1cvjC           ----------------------------------------------------------------------
3dedA           ----------------------------------------------------------------------
1cvjF           ----------------------------------------------------------------------
2dgqA           ----------------------------------------------------------------------
1cvjD           ----------------------------------------------------------------------
3dedC           ----------------------------------------------------------------------
1b7fA           ----------------------------------------------------------------------
2cpzA           ----------------------------------------------------------------------
1a9nB           ----------------------------------------------------------------------
2dhxA           ----------------------------------------------------------------------
2cqcA           ----------------------------------------------------------------------
3b4mD           ----------------------------------------------------------------------
2dh7A           ----------------------------------------------------------------------
2cjkA           ----------------------------------------------------------------------
2a3jA           ----------------------------------------------------------------------
2e5iA           ----------------------------------------------------------------------
2cphA           ----------------------------------------------------------------------
2ek6A           ----------------------------------------------------------------------
2dhaA           ----------------------------------------------------------------------
2dnlA           ----------------------------------------------------------------------
2dgpA           ----------------------------------------------------------------------
1cx0A           ----------------------------------------------------------------------
2cq0A           ----------------------------------------------------------------------
3culA           ----------------------------------------------------------------------
3ctrA           ----------------------------------------------------------------------
3d45A           ----------------------------------------------------------------------
2e5hA           ----------------------------------------------------------------------
2dgxA           ----------------------------------------------------------------------
2dk2A           ----------------------------------------------------------------------
1audA           ----------------------------------------------------------------------
1drzA           ----------------------------------------------------------------------
1cvjB           ----------------------------------------------------------------------
2adbA           ----------------------------------------------------------------------
2disA           ----------------------------------------------------------------------
3egnA           ----------------------------------------------------------------------
1cvjA           ----------------------------------------------------------------------
2cpxA           ----------------------------------------------------------------------
2cpyA           ----------------------------------------------------------------------
3d45B           ----------------------------------------------------------------------
2do4A           ----------------------------------------------------------------------
2dnkA           ----------------------------------------------------------------------
2dgoA           ----------------------------------------------------------------------
2cpfA           ----------------------------------------------------------------------
1a9nD           ----------------------------------------------------------------------
1cvjH           ----------------------------------------------------------------------
2cqdA           ----------------------------------------------------------------------
2cqgA           ----------------------------------------------------------------------
2cqbA           ----------------------------------------------------------------------
3cunA           ----------------------------------------------------------------------
1cvjG           ----------------------------------------------------------------------
2cq4A           ----------------------------------------------------------------------
3b4dA           ----------------------------------------------------------------------
2dnnA           ----------------------------------------------------------------------
2dnyA           ----------------------------------------------------------------------
2dnpA           ----------------------------------------------------------------------
2dnzA           ----------------------------------------------------------------------


                         .         .         .         .         *         .         .:420
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1cvjC           --------------------------------------------------------
3dedA           --------------------------------------------------------
1cvjF           --------------------------------------------------------
2dgqA           --------------------------------------------------------
1cvjD           --------------------------------------------------------
3dedC           --------------------------------------------------------
1b7fA           --------------------------------------------------------
2cpzA           --------------------------------------------------------
1a9nB           --------------------------------------------------------
2dhxA           --------------------------------------------------------
2cqcA           --------------------------------------------------------
3b4mD           --------------------------------------------------------
2dh7A           --------------------------------------------------------
2cjkA           --------------------------------------------------------
2a3jA           --------------------------------------------------------
2e5iA           --------------------------------------------------------
2cphA           --------------------------------------------------------
2ek6A           --------------------------------------------------------
2dhaA           --------------------------------------------------------
2dnlA           --------------------------------------------------------
2dgpA           --------------------------------------------------------
1cx0A           --------------------------------------------------------
2cq0A           --------------------------------------------------------
3culA           --------------------------------------------------------
3ctrA           --------------------------------------------------------
3d45A           --------------------------------------------------------
2e5hA           --------------------------------------------------------
2dgxA           --------------------------------------------------------
2dk2A           --------------------------------------------------------
1audA           --------------------------------------------------------
1drzA           --------------------------------------------------------
1cvjB           --------------------------------------------------------
2adbA           --------------------------------------------------------
2disA           --------------------------------------------------------
3egnA           --------------------------------------------------------
1cvjA           --------------------------------------------------------
2cpxA           --------------------------------------------------------
2cpyA           --------------------------------------------------------
3d45B           --------------------------------------------------------
2do4A           --------------------------------------------------------
2dnkA           --------------------------------------------------------
2dgoA           --------------------------------------------------------
2cpfA           --------------------------------------------------------
1a9nD           --------------------------------------------------------
1cvjH           --------------------------------------------------------
2cqdA           --------------------------------------------------------
2cqgA           --------------------------------------------------------
2cqbA           --------------------------------------------------------
3cunA           --------------------------------------------------------
1cvjG           --------------------------------------------------------
2cq4A           --------------------------------------------------------
3b4dA           --------------------------------------------------------
2dnnA           --------------------------------------------------------
2dnyA           --------------------------------------------------------
2dnpA           --------------------------------------------------------
2dnzA           --------------------------------------------------------