[GTOP][HELP][ORGANISMS][SEARCH][SUMMARY][COMMENT/QUESTION(gtop-admin@spock.genes.nig.ac.jp)]

Result of RPS:SCP for cimm2:CIRT_02968

[Show Plain Result]

#ERROR : Can't open dsspfile "1wa5C.bssp"
#ERROR : Can't open dsspfile "1vzyA1.bssp"
#ERROR : Can't open dsspfile "1f59A.bssp"
#ERROR : Can't open dsspfile "1qwjA.bssp"

## Summary of PDB Search
:963
    3e-06  13%  1wa5C  [a.118.1.1] IMPORTIN ALPHA RE-EXPORTER
    4e-04  10%  1vzyA1 [d.193.1.1] 33 KDA CHAPERONIN A:1 -- 233
    5e-04  10%  1f59A  [a.118.1.1] IMPORTIN BETA-1
    5e-04  19%  1qwjA  [c.68.1.13] CYTIDINE MONOPHOSPHO-N-ACETYLNEURAMINIC ACID
:963

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxxxxxxxxIREATELAQVLSAPGNASFVQTAQARLQTLQKSAAGWAIADSLLGSEDANVRFYGALTLT
1wa5C           ----------MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVITNLPLSTRLAGALFFK
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         .         .         *         .         .         .         .:140
query           MKIHQDWANLGEQMVRDLLIRLVDCFLLLVNKNETPVVMRKFITSMTAMFxxxxxxxxxxxxxxxxxxxx
1wa5C           NFIKRKWVDENGLLPANNVELIKKEIVPLM-ISLPNNLQVQIGEAISSIA--------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         +         .         .         .         .         *         .:210
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLRFASSETQIRVLT
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           --------------------------------------------------------VRVAALQNLVKIMS
1qwjA           ----------------------------------------------------------------------


                         .         .         .         .         *         .         .:420
query           HSPDEKHERILFLLFKLFHAPGVGAVEDMASNLLLEFWTEAADNISELIMEGAFDEPTLSVKENFTRVIA
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           LYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEPPEHTSKFYAKGAL
1qwjA           ----------------------------------------------------------------------


                         .         .         +         .         .         .         .:490
query           ECFDKFRYPNPSVLSEWEDDDVKIFNTFRRDFSDFLLATYPLLGVPMIQQIQERAAVAIRDHDWERFEVA
1wa5C           ----------------------------------------------------------------------
1vzyA1          ------------------------------------------------------------DETITKIEQR
1f59A           QYVPILTQTLTKQDENDDDDDWNP----CKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAA
1qwjA           ----------------------------------------RLAGVPLIGWVLRAALVWVSTDHDEIENVA


                         *         .         .         .         .         +         .:560
query           MFCLASLADTIAENKHADDLLHALFHSELFDAICFGRTDIPLKTRQTLSDMIAKYTPYxxxxxxxxxxxx
1wa5C           ----------------------------------------------------------------------
1vzyA1          LSQVEPISKLIQKGLTPEEILEEVLGEKP-----------------------------------------
1f59A           VMAFGCILEGPEPSPLVIQAMPTLIE--------------------------------------------
1qwjA           KQFGAQVHRRSSESTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREE------------


                         .         .         .         *         .         .         .:630
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         .         +         .         .         .         .         *:700
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         .         .         .         .         +         .         .:770
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         .         .         *         .         .         .         .:840
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         +         .         .         .         .         *         .:910
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1wa5C           ----------------------------------------------------------------------
1vzyA1          ----------------------------------------------------------------------
1f59A           ----------------------------------------------------------------------
1qwjA           ----------------------------------------------------------------------


                         .         .         .         +         .         .         .:980
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1wa5C           -----------------------------------------------------
1vzyA1          -----------------------------------------------------
1f59A           -----------------------------------------------------
1qwjA           -----------------------------------------------------