Result of RPS:SCP for cper0:BAB81144.1
[Show Plain Result]
#ERROR : Can't open dsspfile "1zj8A2.bssp"
#ERROR : Can't open dsspfile "2akjA4.bssp"
#ERROR : Can't open dsspfile "1aopA1.bssp"
#ERROR : Can't open dsspfile "1zj8A3.bssp"
#ERROR : Can't open dsspfile "2akjA1.bssp"
#ERROR : Can't open dsspfile "1aopA4.bssp"
#ERROR : Can't open dsspfile "1kqfB1.bssp"
#ERROR : Can't open dsspfile "2v4jA3.bssp"
#ERROR : Can't open dsspfile "1zj8A1.bssp"
#ERROR : Can't open dsspfile "2akjA2.bssp"
#ERROR : Can't open dsspfile "1durA.bssp"
#ERROR : Can't open dsspfile "2v4jB2.bssp"
#ERROR : Can't open dsspfile "2v4jA1.bssp"
#ERROR : Can't open dsspfile "2v4jB3.bssp"
#ERROR : Can't open dsspfile "1hfeL2.bssp"
#ERROR : Can't open dsspfile "1iqzA.bssp"
#ERROR : Can't open dsspfile "1gt8A1.bssp"
#ERROR : Can't open dsspfile "1jb0C.bssp"
#ERROR : Can't open dsspfile "1h98A.bssp"
#ERROR : Can't open dsspfile "2v4jB1.bssp"
#ERROR : Can't open dsspfile "1aopA2.bssp"
#ERROR : Can't open dsspfile "2fug91.bssp"
#ERROR : Can't open dsspfile "1jnrB.bssp"
#ERROR : Can't open dsspfile "2akjA3.bssp"
#ERROR : Can't open dsspfile "1a6lA.bssp"
#ERROR : Can't open dsspfile "1aopA3.bssp"
#ERROR : Can't open dsspfile "1bluA.bssp"
#ERROR : Can't open dsspfile "1kf6B1.bssp"
#ERROR : Can't open dsspfile "1c4aA3.bssp"
#ERROR : Can't open dsspfile "1gt8A5.bssp"
#ERROR : Can't open dsspfile "2gmhA3.bssp"
#ERROR : Can't open dsspfile "1fxdA.bssp"
#ERROR : Can't open dsspfile "1d0cA.bssp"
#ERROR : Can't open dsspfile "1b0pA5.bssp"
#ERROR : Can't open dsspfile "1xerA.bssp"
#ERROR : Can't open dsspfile "1h0hB.bssp"
#ERROR : Can't open dsspfile "1ti2B2.bssp"
#ERROR : Can't open dsspfile "1nekB1.bssp"
#ERROR : Can't open dsspfile "2fug34.bssp"
#ERROR : Can't open dsspfile "1g8jA2.bssp"
## Summary of PDB Search
:326
1e-17 28% 1zj8A2 [d.58.36.1] PROBABLE FERREDOXIN-DEPENDENT NITRITE REDUCTASE
7e-14 13% 2akjA4 [d.134.1.1] FERREDOXIN--NITRITE REDUCTASE, CHLOROPLAST A:175
3e-13 34% 1aopA1 [d.58.36.1] SULFITE REDUCTASE HEMOPROTEIN A:81 -- 145
4e-13 17% 1zj8A3 [d.134.1.1] PROBABLE FERREDOXIN-DEPENDENT NITRITE REDUCTASE
4e-13 28% 2akjA1 [d.58.36.1] FERREDOXIN--NITRITE REDUCTASE, CHLOROPLAST
3e-12 20% 1aopA4 [d.134.1.1] SULFITE REDUCTASE HEMOPROTEIN A:426 -- 570
2e-11 25% 1kqfB1 [d.58.1.5] FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRON-
4e-11 18% 2v4jA3 [d.134.1.1] SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT
5e-11 19% 1zj8A1 [d.58.36.1] PROBABLE FERREDOXIN-DEPENDENT NITRITE
6e-11 28% 2akjA2 [d.58.36.1] FERREDOXIN--NITRITE REDUCTASE, CHLOROPLAST A:22
3e-10 33% 1durA [d.58.1.1] 2[4FE-4S] FERREDOXIN
3e-10 25% 2v4jB2 [d.58.36.2] SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT
6e-10 15% 2v4jA1 [d.58.1.5] SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT
8e-10 22% 2v4jB3 [d.134.1.1] SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT
3e-09 20% 1hfeL2 [d.58.1.5] PROTEIN (FE-ONLY HYDROGENASE (E.C.1.18.99.1) L:2
4e-09 22% 1iqzA [d.58.1.4] FERREDOXIN
4e-09 11% 1gt8A1 [a.1.2.2] DIHYDROPYRIMIDINE DEHYDROGENASE A:2 -- 183
6e-09 25% 1jb0C [d.58.1.2] PHOTOSYSTEM I IRON-SULFUR CENTER
6e-09 26% 1h98A [d.58.1.2] FERREDOXIN
1e-08 14% 2v4jB1 [d.58.1.5] SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT
1e-08 21% 1aopA2 [d.58.36.1] SULFITE REDUCTASE HEMOPROTEIN A:346 -- 425
2e-08 20% 2fug91 [d.58.1.5] NADH-QUINONE OXIDOREDUCTASE CHAIN 9 9:26 -- 179
4e-08 21% 1jnrB [d.58.1.5] ADENYLYLSULFATE REDUCTASE
6e-08 18% 2akjA3 [d.134.1.1] FERREDOXIN--NITRITE REDUCTASE, CHLOROPLAST A:431
1e-07 25% 1a6lA [d.58.1.2] FERREDOXIN
2e-07 25% 1aopA3 [d.134.1.1] SULFITE REDUCTASE HEMOPROTEIN A:149 -- 345
2e-07 31% 1bluA [d.58.1.1] FERREDOXIN
2e-07 7% 1kf6B1 [a.1.2.1] FUMARATE REDUCTASE IRON-SULFUR PROTEIN B:106 --
4e-07 30% 1c4aA3 [d.58.1.5] PROTEIN (FE-ONLY HYDROGENASE) A:127 -- 209
4e-07 23% 1gt8A5 [d.58.1.5] DIHYDROPYRIMIDINE DEHYDROGENASE A:845 -- 1020
4e-07 16% 2gmhA3 [d.58.1.6] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE A:483
7e-07 30% 1fxdA [d.58.1.4] FERREDOXIN II
7e-07 8% 1d0cA [d.174.1.1] BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME
1e-06 16% 1b0pA5 [d.58.1.5] PROTEIN (PYRUVATE-FERREDOXIN OXIDOREDUCTASE)
2e-06 24% 1xerA [d.58.1.3] FERREDOXIN
2e-06 13% 1h0hB [d.58.1.5] FORMATE DEHYDROGENASE (SMALL SUBUNIT)
2e-06 33% 1ti2B2 [d.58.1.5] PYROGALLOL HYDROXYTRANSFERASE SMALL SUBUNIT B:1
4e-06 13% 1nekB1 [a.1.2.1] SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN B:107
1e-05 15% 2fug34 [d.58.1.5] NADH-QUINONE OXIDOREDUCTASE CHAIN 3 3:96 -- 246
1e-04 16% 1g8jA2 [c.81.1.1] ARSENITE OXIDASE A:6 -- 682
:326
## Multiple Alignment
. . . . + . .:70
query xxxDINTKKLKKNAFRVTKRRGYTASRIRVPGGHLDAKLLLNIQEIADTYGDGTVHITTRQGFEIPGIDM
1zj8A2 ---------------------KYFMMRVRCDGGALSAAALRTLGQISTEFARDTADISDRQNVQYHWIEV
2akjA4 ----------------------------------------------------------------------
1aopA1 --------------------------RCRLPGGVITTKQWQAIDKFAGENIYGSIRLTNRQTFQFHG---
1zj8A3 ----------------------------------------------------------------------
2akjA1 --------------------------GLHIPVGRLQADEMEELARIADVYGSGELRLTVEQNIIIPNVEN
1aopA4 ----------------------------------------------------------------------
1kqfB1 ----------------------------------------------------------------------
2v4jA3 ----------------------------------------------------------------------
1zj8A1 -------------------KNGLNAVGVAPIAGRVSGTILTAVADLMARAGSDRIRFTPYQKLDIPDALL
2akjA2 ---DIDVRLKWLGLFHRRKHHYGRFMRLKLPNGVTTSEQTRYLASVIKKYGDGCADVTTRQNWQIRGVVL
1durA ----------------------------------------------------------------------
2v4jB2 ---------------------------VRVGARLMSITHIREMCDIADKYCGGHLRFTTRNNVEFMVADE
2v4jA1 ----------------------------------------------------------------------
2v4jB3 ----------------------------------------------------------------------
1hfeL2 ----------------------------------------------------------------------
1iqzA ----------------------------------------------------------------------
1gt8A1 ----------------------------------------------------------------------
1jb0C ----------------------------------------------------------------------
1h98A ----------------------------------------------------------------------
2v4jB1 ----------------------------------------------------------------------
1aopA2 ---------------------DNWHLTLFIENGRIARPLKTGLLEIAKIHK-GDFRITANQNLIIAGVPE
2fug91 ----------------------------------------------------------------------
1jnrB ----------------------------------------------------------------------
2akjA3 ----------------------------------------------------------------------
1a6lA ----------------------------------------------------------------------
1aopA3 ----------------------------------------------------------------------
1bluA ----------------------------------------------------------------------
1kf6B1 ----------------------------------------------------------------------
1c4aA3 ----------------------------------------------------------------------
1gt8A5 ----------------------------------------------------------------------
2gmhA3 ----------------------------------------------------------------------
1fxdA ----------------------------------------------------------------------
1d0cA ----------------------------------------------------------------------
1b0pA5 ----------------------------------------------------------------------
1xerA ----------------------------------------------------------------------
1h0hB ----------------------------------------------------------------------
1ti2B2 ----------------------------------------------------------------------
1nekB1 ----------------------------------------------------------------------
2fug34 ----------------------------------------------------------------------
1g8jA2 ----------------------------------------------------------------------
. . * . . . .:140
query KDIPEVNKKLQxxxxxxxINQENPGDGYNAAGTRNVSACIGNNVCPFANYNTTNFAKKIEKAIFPNDLHF
1zj8A2 ENVPEIWRRLD-----------------------------------------------------------
2akjA4 ---------------------------------RNPVGNPLAGIDPHEIVDTRPFTNLISQFVTANSRGW
1aopA1 --ILPVHQMLH-----------------------------------------------------------
1zj8A3 -----------------------------SHWRRNLMACSGIEFCKLSFAETRVRAQHLVPELSQLDVPI
2akjA1 SKIDSLLNEP------------------------------------------------------------
1aopA4 ---------------------------------ENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLDEHI
1kqfB1 ----------------------------------DVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDNPA
2v4jA3 ---------------------------------RTPESCLGKSRCEFACYDSQAACYELTMEYQDEPYKF
1zj8A1 DDL-------------------------------------------------------------------
2akjA2 PDVPEIIKGLE-----------------------------------------------------------
1durA ----------------------------------------------------------------------
2v4jB2 ASLKALKEDL------------------------------------------------------------
2v4jA1 ----------------------------------------------------------------------
2v4jB3 -----------------------------GAGVSNIVHTQGWVHCHTPATDASGPVKAIMDEVFELPAPV
1hfeL2 ----------------------------------------------------------------------
1iqzA ----------------------------------------------------------------------
1gt8A1 ----------------------------------------------------------------------
1jb0C ----------------------------------------------------------------------
1h98A ----------------------------------------------------------------------
2v4jB1 ----------------------------------------------------------------------
1aopA2 SEKAKIEK--------------------------------------------------------------
2fug91 ----------------------------------------------------------------------
1jnrB ----------------------------------------------------------------------
2akjA3 ------------------------------ILMKGLVACTGSQFCGQAIIETALKVTEEVQRLVSVTRPV
1a6lA ----------------------------------------------------------------------
1aopA3 ---------------------------------RNVLCT-SNPYESQLHAEAYEWAKKISEHLLPTYLKF
1bluA ----------------------------------------------------------------------
1kf6B1 -----------------------------------------------------TNIQTPAQMAKYHQFSG
1c4aA3 ----------------------------------------------------------------------
1gt8A5 ----------------------------------------------------------------------
2gmhA3 ----------------------------------------------------------------------
1fxdA ----------------------------------------------------------------------
1d0cA ------------------PRVKNWELGYDTLCAQSQQDGPCTPRRCLGSLVLPRKGPPPAEQLLSQARDF
1b0pA5 ------------------------------------ENCIQCNQC---------AFVCPHSAILPVLAKE
1xerA ----------------------------------------------------------------------
1h0hB ----------------------------------DTTRCTACRGCQVA----CKQWHGNPATPTENTGFH
1ti2B2 ----------------------------------------------------------------------
1nekB1 -----------------------------------------------------EHLQMPEQREKLDGLYE
2fug34 --------------------------------------PLDCPTCDKGG--------ACELQDRTVEYGL
1g8jA2 ----------------------------------------------------------------------
+ . . . . * .:210
query KIALTGCPNDCIKARMHDFGIIGMTEPQYERNRCVSCGACVRACKKKATGALSFENFKVVRDGSKCIGCG
1zj8A2 ----------------------------------------------------------------------
2akjA4 NPCVIGSHDLYEHPHINDLAYMPATKNGKFGFNLLVGGFFSIKRCEEAIAMLEAFRDLGFRGNRQKCRMM
1aopA1 ----------------------------------------------------------------------
1zj8A3 TVNINGCPNSCARIQIADIGFKG-------QMIDDGHGGSVEGF--------------------------
2akjA1 ----------------------------------------------------------------------
1aopA4 VMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTTEPEILASLDELIGRWAKEREAGEGFGDFT
1kqfB1 DLS----AKSWTVMRFSETEQNGKLEWLIRKDGCMHCEGCLKACPSAGA-IIQYANGIVDFQSENCIGCG
2v4jA3 KFKFDACPNGCVASIRSDFSVIGT-WKRGASILCGAKAPILDGAQMGSLLV------PFVAAEEPFDEIK
1zj8A1 ----------------------------------------------------------------------
2akjA2 ----------------------------------------------------------------------
1durA -------------------------------DSCIACGACKPECP---VNCIQEGSIYAI-DADSCIDCG
2v4jB2 ----------------------------------------------------------------------
2v4jA1 -----------------EFKPNAGAHSGRDWGKFDIEAEVVNRCP---SKCMKWDGSKLSIDNKECVRCM
2v4jB3 RISLACCINMCGAVHCSDIGVVGI---------------------HRGDGVVIMVGGKVSNRISMPKFSK
1hfeL2 -MERIEYEMHTPDPKADP---DKLHFVQIDEAKCIGCDTCSQYCPTAA-IFGEMGEPHSIPHIEACINCG
1iqzA --------------------------TIVDKETCIACGACGAAEDGIAYVTLDDNQGIVEVPDILIDDMM
1gt8A1 -----TSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSILQQFASEVFKAMNIPQ
1jb0C -------------------------HTVKIYDTCIGCTQCVRACPTDVLEMVPWDGIASSPRTEDCVGCK
1h98A --------------------------PHVICEPCIGVKSCVEVCP---VECIYDGGDQFYIHPEECIDCG
2v4jB1 --------------------------DHEWTDQLCEIPLAVASCRPTKLEIGDKKVNTIAIKNERCMYCG
1aopA2 ----------------------------------------------------------------------
2fug91 -------------------GRHVLTRHPNGLEKCIGCSLCAAACPENPVSAGERYAKVYEINMLRCIFCG
1jnrB -------------------------------EKCDGCKALERTACEYINDLMTLDKEKYNREPDMCWECY
2akjA3 RMHWTGCPNSCGQVQVADIGFMGCMTRCEGADVFVGGRIGSDSHLGDIYK-------KAVPCKDLVPVVA
1a6lA ----------------------------VVTDNCIKCKDCVEVCP---VDCFYEGPNFLVIHPDECIDCA
1aopA3 KTTVVIPPQNDIDLHANDMNFVAI----------------------------------------------
1bluA -------------------------------DECINCDVCEPECP---NGAISQGDETYVIEPSLCTECS
1kf6B1 CIN-------CGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKER--MAQLNSQNGVWSCTFVG
1c4aA3 --------------------------LTVDRTKCLLCGRCVNACLNKNGKTIIGAEDEKCFDDTNCLLCG
1gt8A5 ----------------------------------VIGKALQYLGTFGEL--SNIEQVVAVIDEEMCINCG
2gmhA3 --------------------------VPVNRNLSIYDGPEQRFCPAGVVPLEQGDGFRLQINAQNCVHCK
1fxdA --------------------------PIEVNDDCMAXEACVEICPD--VFEMNEEGDKVVINPDSDLDCV
1d0cA INQYYSSKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQYICNHIK
1b0pA5 EELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICP---PKEKALVMQPLDTQRDAQVPNL
1xerA ----------YGPVEPPXVLGIHGTIVGVDFDLCIADGSCINACPVNVPGHPASEKKADPVNEQACIFCM
1h0hB QNPPDFNFHTYKLVRMHEQEIDGRIDWLFFPDQCRHCIPCKATADMEDESAIIHDDVLFTPKTKDLEDYE
1ti2B2 --------------------------------RPTPCMHCENACVAKGNGAVYQEDGIVLIDPEKAKGKK
1nekB1 CILCACCSTSCPSFWWNPDKFIG------PAGLLAAYRFLIDSRDTETDSRL--DGLSDAFSVFRCHSIM
2fug34 YEKLPVYTRFEFTRRHVDKHHPLSPFVILDRERCIHCKRCVRYFEEVPGDEVLHTFIGTMDFGLPSGFSG
1g8jA2 -----------------------RTNMTCHFC-IVGCGYHVYKWPELEEGGRAPEQNALGLDFRKQLPPL
. . . + . . .:280
query ECVMNCPTNAWTRSKEKYYRLAIMGRTGKKNPRLAEDFILWVDEDSIIKIILNTYKYVTEYIAKDAPGGK
1zj8A2 ----------------------------------------------------------------------
2akjA4 WLI-------------------------------------------------------------------
1aopA1 ----------------------------------------------------------------------
1zj8A3 ----------------QVHLGGHLGLDAGFGRKLRQHKVTSDELGDYIDRVVRNFVKHRSE--------G
2akjA1 ----------------------------------------------------------------------
1aopA4 VRAGIIR---------------------------------------------------------------
1kqfB1 YCIAGCPFNIPRLNKED-----------------------------------------------------
2v4jA3 EVVEKIWD-WWMEEGKNR------ERLGETMKRLSQKLLEVTEIAPVPQHVKE-----------------
1zj8A1 ----------------------------------------------------------------------
2akjA2 ----------------------------------------------------------------------
1durA SCASVCPVGA------------------------------------------------------------
2v4jB2 ----------------------------------------------------------------------
2v4jA1 HCINTMPRALHI----------------------------------------------------------
2v4jB3 VVVAYIPNE-------------------------------PPRWPSLTKTIKHIIEVYSANAYK-----Y
1hfeL2 QCLTHCPENA------------------------------------------------------------
1iqzA DAFEGCPTDS------------------------------------------------------------
1gt8A1 IRNPCLPSQE------------------------------------------------------------
1jb0C RCETACPTDF------------------------------------------------------------
1h98A ACVPACPVNAIYPEEDV-----------------------------------------------------
2v4jB1 NCYTMCPALPIS----------------------------------------------------------
1aopA2 ----------------------------------------------------------------------
2fug91 LCEEACPTGAIVLGYDFEMADYEYSDLVYGKEDMLVD---------------------------------
1jnrB SCVKMCPQGAIDVRGYVDYSPDIMWTVKYRNGKVLRFKFAI-----------------------------
2akjA3 EILINQ----------------------------------------------------------------
1a6lA LCEPECPAQAIF----------------------------------------------------------
1aopA3 ----------------------------------------------------------------------
1bluA QCVEVCPVDCIIELRAKYERIT------------------------------------------------
1kf6B1 YCSEVCPKHVDPAAAIQQGKVESSKDFLI-----------------------------------------
1c4aA3 QCIIACPVAALS----------------------------------------------------------
1gt8A5 KCYMTCNDSGYQAIQFDP----------------------------------------------------
2gmhA3 TCDIKDPSQNINWVVPEGGG--------------------------------------------------
1fxdA EAIDSCPAEAIVRS--------------------------------------------------------
1d0cA YAT--NRGNLRSAITVFPQRAPGRGDFRIWNSQLVRYAGYRQQDGSVR----------------------
1b0pA5 EYAARIP---------------------------------------------------------------
1xerA ACVNVCPVAAID----------------------------------------------------------
1h0hB SVISACPYDVPRKVAES-----------------------------------------------------
1ti2B2 ELLDTCPYGV------------------------------------------------------------
1nekB1 NCVSVCPKGLNPTRAIGHIKSMLLQRNA------------------------------------------
2fug34 NITDICPVGALLDLTARF----------------------------------------------------
1g8jA2 ASTLTPAMTNV-----------------------------------------------------------
. * . . . . +:350
query EHIGYIIDRTGFMEFKKxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1zj8A2 ----------------------------------------------
2akjA4 ----------------------------------------------
1aopA1 ----------------------------------------------
1zj8A3 ERFAQWVIRAEEDDLR------------------------------
2akjA1 ----------------------------------------------
1aopA4 ----------------------------------------------
1kqfB1 ----------------------------------------------
2v4jA3 ----------------------------------------------
1zj8A1 ----------------------------------------------
2akjA2 ----------------------------------------------
1durA ----------------------------------------------
2v4jB2 ----------------------------------------------
2v4jA1 ----------------------------------------------
2v4jB3 ERLGEWAERIGWERFFS-----------------------------
1hfeL2 ----------------------------------------------
1iqzA ----------------------------------------------
1gt8A1 ----------------------------------------------
1jb0C ----------------------------------------------
1h98A ----------------------------------------------
2v4jB1 ----------------------------------------------
1aopA2 ----------------------------------------------
2fug91 ----------------------------------------------
1jnrB ----------------------------------------------
2akjA3 ----------------------------------------------
1a6lA ----------------------------------------------
1aopA3 ----------------------------------------------
1bluA ----------------------------------------------
1kf6B1 ----------------------------------------------
1c4aA3 ----------------------------------------------
1gt8A5 ----------------------------------------------
2gmhA3 ----------------------------------------------
1fxdA ----------------------------------------------
1d0cA ----------------------------------------------
1b0pA5 ----------------------------------------------
1xerA ----------------------------------------------
1h0hB ----------------------------------------------
1ti2B2 ----------------------------------------------
1nekB1 ----------------------------------------------
2fug34 ----------------------------------------------
1g8jA2 ----------------------------------------------
[GTOP]