[GTOP][HELP][ORGANISMS][SEARCH][SUMMARY][COMMENT/QUESTION(gtop-admin@spock.genes.nig.ac.jp)]

Result of BLT:PDB for elen0:ACV55075.1

[Show Plain Result]

#ERROR : Can't open dsspfile "1efuB.bssp"
#ERROR : Can't open dsspfile "1aipH.bssp"
#ERROR : Can't open dsspfile "1aipC.bssp"
#ERROR : Can't open dsspfile "1xb2B.bssp"
#ERROR : Can't open dsspfile "1tfeA.bssp"
#ERROR : Can't open dsspfile "1aipH.bssp"
#ERROR : Can't open dsspfile "1aipC.bssp"
#ERROR : Can't open dsspfile "1tfeA.bssp"

## Summary of PDB Search
:286
    4e-37  37%  1efuB  [a.5.2 - d.43.1 - d.43.1] ELONGATION FACTOR TS
    3e-16  39%  1aipH  [a.5.2 - d.43.1] ELONGATION FACTOR TS
    3e-16  39%  1aipC  [a.5.2 - d.43.1] ELONGATION FACTOR TS
    3e-15  39%  1xb2B  [a.5.2 - d.43.1 - d.43.1] ELONGATION FACTOR TS, MITOCHONDRIAL
    3e-12  29%  1tfeA  [x.x.x] ELONGATION FACTOR TS
    3e-12  29%  1aipH  [a.5.2 - d.43.1] ELONGATION FACTOR TS(query 149->285)
    3e-12  29%  1aipC  [a.5.2 - d.43.1] ELONGATION FACTOR TS(query 149->285)
    4e-05  37%  1tfeA  [x.x.x] ELONGATION FACTOR TS(query 59->107)
:286

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xAAVTASMVKELREMTGAGMMECKKALVEADGNIDQAVDVLRTRGLAAVAKKAGRATNEGTVMAIVSDDA
1efuB           -AEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRXXXXXXXXXXXXXXXXXXVIKTKI--DG
1aipH           -------LIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMXXXXXXDREAREGIIGHYIHHNQ
1aipC           -------LIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMXXXXXXDREAREGIIGHYIHHNQ
1xb2B           -SASSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHKQGWSKAARLHGRKTKEGLIGLLQEGDT
1tfeA           ----------------------------------------------------------------------
1aipH           ----------------------------------------------------------------------
1aipC           ----------------------------------------------------------------------
1tfeA           ----------------------------------------------------------EGIIGHYIHHNQ


                         .         .         *         .         .         .         .:140
query           TSGAVVELNCETDFVGMNDKFKAYAEKIAQAALASKPXXXXXXXXXXXXGETVEAVVTDAIHTLGENIQL
1efuB           NYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGK------ITDVEVLKAQFEEERVALVAKIGENINI
1aipH           RVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNP---------------------------------
1aipC           RVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNP---------------------------------
1xb2B           T--VLVEVNCETDFVSRNLKFQQLVQQVAQLSTYSKGFLNSSELSELPAGPEREGSLKDAIGKLGENMIL
1tfeA           ----------------------------------------------------------------------
1aipH           ----------------------------------------------------------------------
1aipC           ----------------------------------------------------------------------
1tfeA           RVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNP---------------------------------


                         +         .         .         .         .         *         .:210
query           ARFAVVEGGAVSSYIHGGGKIGVLVQFDVEGIDPASDGFKQFGRDXXXXXXXXXXXXXTRESVDPAIVEH
1efuB           RRVAALEGDVLGSYQH-GARIGVLVA--AKGAD------EELVKHIAMHVAASKPEFIKPEDVSAEVVEK
1aipH           ----------------------------------------------------------------------
1aipC           ----------------------------------------------------------------------
1xb2B           KRAAWVKGFYVGSYVHGAGKYGALV---------------------------------------------
1tfeA           --------GIIGHYIHHNQRVGVLVELNCETDFVANELFQNLAKDLAMHIAMMNPRYVSAXXXXXXXXXX
1aipH           --------GIIGHYIHHNQRVGVLVELNCETDFVANELFQNLAKDLAMHIAMMNPRYVSAXXXXXXXXXX
1aipC           --------GIIGHYIHHNQRVGVLVELNCETDFVANELFQNLAKDLAMHIAMMNPRYVSAXXXXXXXXXX
1tfeA           ----------------------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           EKAIYMAQAAESGKPEAIQEKMATGRLEKFFKESTLTEQPFVKNPDQSVSEYAAEVAKNLGGEIKIVDFK
1efuB           EYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSKTVGQLLKE------HNAEVTGFI
1aipH           ----------------------------------------------------------------------
1aipC           ----------------------------------------------------------------------
1xb2B           ----------------------------------------------------------------------
1tfeA           XRQIYIQAALNEGKPQQIAEKIAEGRLKKYXXXXXXXXQPFVKDDKVKVKELIQQAIAKIGENIVVRRFC
1aipH           XRQIYIQAALNEGKPQQIAEKIAEGRLKKYXXXXXXXXQPFVKDDKVKVKELIQQAIAKIGENIVVRRFC
1aipC           XRQIYIQAALNEGKPQQIAEKIAEGRLKKYXXXXXXXXQPFVKDDKVKVKELIQQAIAKIGENIVVRRFC
1tfeA           ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           RFVLGE
1efuB           RFEVGE
1aipH           ------
1aipC           ------
1xb2B           ------
1tfeA           RFELG-
1aipH           RFELG-
1aipC           RFELG-
1tfeA           ------