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Result of RPS:SCP for elen0:ACV55591.1

[Show Plain Result]

#ERROR : Can't open dsspfile "2o38A1.bssp"
#ERROR : Can't open dsspfile "1y7yA1.bssp"
#ERROR : Can't open dsspfile "1b0nA2.bssp"
#ERROR : Can't open dsspfile "1perL.bssp"
#ERROR : Can't open dsspfile "1x57A1.bssp"
#ERROR : Can't open dsspfile "1y9qA1.bssp"
#ERROR : Can't open dsspfile "2auwA1.bssp"
#ERROR : Can't open dsspfile "2aw6A1.bssp"
#ERROR : Can't open dsspfile "1utxA.bssp"
#ERROR : Can't open dsspfile "2ao9A1.bssp"
#ERROR : Can't open dsspfile "1lliA.bssp"

## Summary of PDB Search
:378
    6e-07  15%  2o38A1 [a.35.1.13] HYPOTHETICAL PROTEIN A:28 -- 116
    2e-05  23%  1y7yA1 [a.35.1.3] C.AHDI A:5 -- 73
    3e-05  17%  1b0nA2 [a.35.1.3] PROTEIN (SINR PROTEIN) A:1 -- 68
    5e-05  12%  1perL  [a.35.1.2] PROTEIN (434 REPRESSOR)
    1e-04  18%  1x57A1 [a.35.1.12] ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1
    2e-04  17%  1y9qA1 [a.35.1.8] TRANSCRIPTIONAL REGULATOR, HTH_3 FAMILY A:4 --
    4e-04  17%  2auwA1 [a.35.1.10] HYPOTHETICAL PROTEIN NE0471 A:88 -- 154
    5e-04  17%  2aw6A1 [a.35.1.11] PRGX A:1 -- 69
    5e-04  19%  1utxA  [a.35.1.3] CYLR2
    5e-04  13%  2ao9A1 [a.4.1.17] PHAGE PROTEIN A:13 -- 132
    8e-04  22%  1lliA  [a.35.1.2] PROTEIN (LAMBDA REPRESSOR)
:378

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           MTFGTILREARERKGYDLATAARRLRIRPDILRAIEEDDFSRMPPRGYARNMVNAYARLVGLNPTEMTRM
2o38A1          LRLAYALNAVIDRARLSQAAAAARLGINQPKVSALRNYKLEGFSV-----ERLXTLLNALDQDVEI----
1y7yA1          VKFGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERG---QRNVS---LVNILKLATALDIEPRE----
1b0nA2          --IGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQ-----FLEKVSAVLDVSVHT----
1perL           -SISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENG---KTKRPRFLP----ELASALGVSVDW----
1x57A1          LEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGR--AIPNNQVLG----KIERAIGLKLRGKDIG
1y9qA1          -QIANQLKNLRKSRGLSLDATAQLTGVSKAXLGQIERGE--SSPT----IATLWKIASGLEASFSA----
2auwA1          --SHEXFGDWXHRNNLSLTTAAEALGISRRXVSYYRTAH--KIIPRTIWLACLGWE--------------
2aw6A1          FKIGSVLKQIRQELNYHQIDLYSGI-MSKSVYIKVEADS--RPISVEELS----KFSERLGVNFFE----
1utxA           --IINNLKLIREKKKISQSELAALLEVSRQTINGIEKNK--YNPSLQLAL----KIAYYLNTPLED----
2ao9A1          AAYLLVENELMEEEKRTQDEMANELGINRTTLWEWRTKNQDFIAF-----KSEVADSFLAEKREQV----
1lliA           -RLKAIYEKKKNELGLSQESLADKLGMGQSGIGALF---------NG--INALNAYAKILKVSVEE----


                         .         .         *         .         .         .         .:140
query           YLDExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
2o38A1          ----------------------------------------------------------------------
1y7yA1          ----------------------------------------------------------------------
1b0nA2          ----------------------------------------------------------------------
1perL           ----------------------------------------------------------------------
1x57A1          KPIE------------------------------------------------------------------
1y9qA1          ----------------------------------------------------------------------
2auwA1          ----------------------------------------------------------------------
2aw6A1          ----------------------------------------------------------------------
1utxA           ----------------------------------------------------------------------
2ao9A1          ----------------------------------------------------------------------
1lliA           ----------------------------------------------------------------------


                         +         .         .         .         .         *         .:210
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
2o38A1          ----------------------------------------------------------------------
1y7yA1          ----------------------------------------------------------------------
1b0nA2          ----------------------------------------------------------------------
1perL           ----------------------------------------------------------------------
1x57A1          ----------------------------------------------------------------------
1y9qA1          ----------------------------------------------------------------------
2auwA1          ----------------------------------------------------------------------
2aw6A1          ----------------------------------------------------------------------
1utxA           ----------------------------------------------------------------------
2ao9A1          ----------------------------------------------------------------------
1lliA           ----------------------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
2o38A1          ----------------------------------------------------------------------
1y7yA1          ----------------------------------------------------------------------
1b0nA2          ----------------------------------------------------------------------
1perL           ----------------------------------------------------------------------
1x57A1          ----------------------------------------------------------------------
1y9qA1          ----------------------------------------------------------------------
2auwA1          ----------------------------------------------------------------------
2aw6A1          ----------------------------------------------------------------------
1utxA           ----------------------------------------------------------------------
2ao9A1          ----------------------------------------------------------------------
1lliA           ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
2o38A1          ----------------------------------------------------------------------
1y7yA1          ----------------------------------------------------------------------
1b0nA2          ----------------------------------------------------------------------
1perL           ----------------------------------------------------------------------
1x57A1          ----------------------------------------------------------------------
1y9qA1          ----------------------------------------------------------------------
2auwA1          ----------------------------------------------------------------------
2aw6A1          ----------------------------------------------------------------------
1utxA           ----------------------------------------------------------------------
2ao9A1          ----------------------------------------------------------------------
1lliA           ----------------------------------------------------------------------


                         .         .         .         .         *         .         .:420
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxx
2o38A1          ----------------------------
1y7yA1          ----------------------------
1b0nA2          ----------------------------
1perL           ----------------------------
1x57A1          ----------------------------
1y9qA1          ----------------------------
2auwA1          ----------------------------
2aw6A1          ----------------------------
1utxA           ----------------------------
2ao9A1          ----------------------------
1lliA           ----------------------------