[GTOP][HELP][ORGANISMS][SEARCH][SUMMARY][COMMENT/QUESTION(gtop-admin@spock.genes.nig.ac.jp)]

Result of BLT:PDB for lsal0:ABD99890.1

[Show Plain Result]

#ERROR : Can't open dsspfile "1lmzA.bssp"
#ERROR : Can't open dsspfile "2ofkB.bssp"
#ERROR : Can't open dsspfile "2ofkA.bssp"
#ERROR : Can't open dsspfile "2ofiA.bssp"
#ERROR : Can't open dsspfile "2jg6A.bssp"

## Summary of PDB Search
:183
    1e-47  50%  1lmzA  [a.96.1] 3-METHYLADENINE DNA GLYCOSYLASE I (TAG)
    2e-47  49%  2ofkB  [x.x.x] 3-METHYLADENINE DNA GLYCOSYLASE I, CONSTITUTIVE
    2e-47  49%  2ofkA  [x.x.x] 3-METHYLADENINE DNA GLYCOSYLASE I, CONSTITUTIVE
    3e-41  50%  2ofiA  [x.x.x] 3-METHYLADENINE DNA GLYCOSYLASE I, CONSTITUTIVE
    2e-39  41%  2jg6A  [x.x.x] DNA-3-METHYLADENINE GLYCOSIDASE
:183

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xKCAWIYGADQLMIDYHDKEWGRPLHDERGLFELLCLEGLQAGLSWKIVLNKRKFLREAFDNFEVEKISQ
1lmzA           -RCGWV-SQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAA
2ofkB           -RCDWV-SQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAA
2ofkA           -RCDWV-SQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAA
2ofiA           -RCDWV-SQDPLYIAYHDNEWGVPETDSRKLFEI-CLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAA
2jg6A           ---------DPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQ


                         .         .         *         .         .         .         .:140
query           YTLDDVEKLLTDPRIIRNRRKIEAIINNAKIVNALHERNESLDSFFWGIINNQPIINNFKNPEEIPTKTK
1lmzA           MQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFADFVWSFVNHQPQMTQATTLSEIPTSTP
2ofkB           MQEEDVERLLQNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTP
2ofkA           MQEEDVERLLQNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTP
2ofiA           QE-EDVERLLQNTGIIRHRGKIQAIISNARAWLA-EQNGESFADFVWSFVDGQPQITQAASLDKIPTSTP
2jg6A           MTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDD


                         +         .         .         .         .         *         .:210
query           LSEQISKTLKKMGFKFVGPTIVYSFMEASGMVNDHLVGCYxxx
1lmzA           ASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC----
2ofkB           ASDALAKALKKRGFKFVGTTICYSFMQACGLVNDHITGCF---
2ofkA           ASDALAKALKKRGFKFVGTTICYSFMQACGLVNDHITGCF---
2ofiA           ASDALAKALKKRGFKFVGTTICYSF-QACGLVNDHITGCF---
2jg6A           TATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDC----