[GTOP][HELP][ORGANISMS][SEARCH][SUMMARY][COMMENT/QUESTION(gtop-admin@spock.genes.nig.ac.jp)]

Result of RPS:SCP for noce0:ABA57977.1

[Show Plain Result]

#ERROR : Can't open dsspfile "1gg1A.bssp"
#ERROR : Can't open dsspfile "1d9eA.bssp"
#ERROR : Can't open dsspfile "1rzmA.bssp"
#ERROR : Can't open dsspfile "1iyjB3.bssp"

## Summary of PDB Search
:366
    e-149  58%  1gg1A  [c.1.10.4] 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE
    5e-48  15%  1d9eA  [c.1.10.4] 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE
    1e-39  20%  1rzmA  [c.1.10.4] PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE
    8e-32  15%  1iyjB3 [b.40.4.3] BREAST CANCER SUSCEPTIBILITY B:2599 -- 2731
:366

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxxxxDLRIKNIQEVIPPAQLHEGLPITSEASKTVYRTRQAIQEVLGGKDDRLLVVAGPCSIHDPQAAR
1gg1A           ------DLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAK
1d9eA           --------------------------------------KVVSIGDINVANDLPFVLFGGMNVLESRDLAM
1rzmA           -------------DRYVVADKF-ESLDCVESVVRVLFHPEDTVIDLGDVKNGYFTIIAGPCSVEGREMLM
1iyjB3          ---------------------------------------RSALKKILERDDTAKTLVLCVSDIISKVDTI


                         .         .         *         .         .         .         .:140
query           DYGKRXXXXXXXXXXXXXXVMRVYFEKPRSTVGWKGLINDPHLDGSFQINEGXXXXXXXXXXXXETGVPA
1gg1A           EYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPA
1d9eA           RICEHYVTVTQKLGIPY--VFKASFDKARSSISYRGPGLEEGMKIFQELKQ-------------TFGVKI
1rzmA           ETAHFLSELGVK-------VLRGGAYKPRSPYSFQGLGEK-GLEYLREAAD-------------KYGMYV
1iyjB3          ELTDGWYAVKAQLDP----PLLALVKSGRLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRP


                         +         .         .         .         .         *         .:210
query           GTEYLDLVSPQYIADLIAWGAIGARTTESQVHRELASGLSCPVGFKNATNGSLGAAMSAIVSASKPHHFL
1gg1A           AGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFL
1d9eA           ITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIV----------
1rzmA           VTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSA----------
1iyjB3          AHSKLGFHDPRP----------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           SLTLAGRSAIFSTAGNPDCHLILRGGQKPNYDAASVNETAHNLIQTGLRPQVMIDCSHGNSSKNPKKQVL
1gg1A           SVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMD
1d9eA           --------DKFKEGGNEKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQRA------Q
1rzmA           --------EYIANSGNTKIILCERGIRTEKATRNTLDISAVPIIRKESHLPILVDPSHSGGRR-----DL
1iyjB3          ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           VARDIAGQIAAGDRRIMGVMLESHLVAGRQDVIPNTPLTYGQSITDACIGWEESEQLLREFARAIQKRRQ
1gg1A           VCADVCQQIAGGEKAIIGVMVESHLVEGNQSL----PLAYGKSITDACIGWEDTDALLRQLANAVKARR-
1d9eA           VAELARAGMAVG---LAGLFIEAHPDPEPSALPLA--------------KLEPFLKQMKAIDDLVKGFEE
1rzmA           VIPLSRAAIAVGAH---GIIVEVH----------------------------------------------
1iyjB3          ----------------------------------------------------------------------


                         .         .         .         .         *         .         .:420
query           xxxxxxxxxxxxxxxx
1gg1A           ----------------
1d9eA           ----------------
1rzmA           ----------------
1iyjB3          ----------------