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Result of RPS:PDB for paer1:AAL64972.1

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#ERROR : Can't open dsspfile "3bvpA.bssp"
#ERROR : Can't open dsspfile "3bvpB.bssp"
#ERROR : Can't open dsspfile "3cmbA.bssp"
#ERROR : Can't open dsspfile "3cmbB.bssp"
#ERROR : Can't open dsspfile "1ddtA.bssp"

## Summary of PDB Search
:251
    5e-16  27%  3bvpA  [x.x.x] TP901-1 INTEGRASE
    9e-16  27%  3bvpB  [x.x.x] TP901-1 INTEGRASE
    9e-06  11%  3cmbA  [x.x.x] ACETOACETATE DECARBOXYLASE
    1e-05  13%  3cmbB  [x.x.x] ACETOACETATE DECARBOXYLASE
    5e-05  11%  1ddtA  [d.166.1 - f.1.2 - b.2.1 (1mdtA)] DIPHTHERIA TOXIN
:251

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxAVTYIRVSTEEQDPENQRVFLERWAGERGIYIVKHYVDVGVSGATEPWERPAFRQMASEVDKLEPRP
3bvpA           ---VAIYTRVSTTNQAEDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKL--ERPAMQRLINDI--ENKAF
3bvpB           ---VAIYTRVSTG-FSIDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKL--ERPAMQRLINDI--ENKAF
3cmbA           -------------------LHIVRPHFATTVSYEGNTFLNDFEATGSITGRDLDALKSQF--------LT
3cmbB           ---------------DIEDLHIVRPHFATTVSYEGNTFLNDFEATG---SITGRDLDALKSQF-----LT
1ddtA           ------VVKVTYPGLTKVLALKVD-NAETIKKELGLSLTE--------PLMEQVGTEEFIKRFGDGA---


                         .         .         *         .         .         .         .:140
query           RVLLVYEISRLVRSFQELFTLLDVVENRLGLVVVSASEREQALQNLDGVYRQFLRAVLAFVATMEREFIR
3bvpA           DTVLVYKLDRLSRSVRDTLYLVKDVFTKNKIDFISLNESI----DTSSAMGSLFLTILSAINEFERELE-
3bvpB           DTVLVYKLDRLSRSVRDTLYLVKDVFTKNKIDFISLNESI----DTSSAMGSLFLTILSAINEFERELE-
3cmbA           NTLGWRYIPKVGAPGAELSQFVLYPQGEVETAEVGK---GSLKWTELTPQSPAQYYIVNSLASLP---IK
3cmbB           NTLGWRYIPKVGAPGAELSQFVLYPQGEVETAEVGKGSLKWTELTPQS---PAQYYIVNSLASLP---IK
1ddtA           -SRVVLSLPFAEGSSSVEYINNW--EQAKALSVELEINFETRGKRGQDAMYEYMAQACASCINLDWDVIR


                         +         .         .         .         .         *         .:210
query           QRTKTALERARLQGKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
3bvpA           ----------------------------------------------------------------------
3bvpB           ----------------------------------------------------------------------
3cmbA           RVTQAVLVEGRAILR-------------------------------------------------------
3cmbB           RVTQAVLVEGRAILR-------------------------------------------------------
1ddtA           DKTK------------------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
3bvpA           -----------------------------------------
3bvpB           -----------------------------------------
3cmbA           -----------------------------------------
3cmbB           -----------------------------------------
1ddtA           -----------------------------------------