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Result of RPS:PDB for pubi0:AAZ21535.1

[Show Plain Result]

#ERROR : Can't open dsspfile "1bllE.bssp"
#ERROR : Can't open dsspfile "1ekjB.bssp"
#ERROR : Can't open dsspfile "1ekjF.bssp"
#ERROR : Can't open dsspfile "1ekjA.bssp"
#ERROR : Can't open dsspfile "2a8jA.bssp"
#ERROR : Can't open dsspfile "1ekjD.bssp"
#ERROR : Can't open dsspfile "1ekjE.bssp"
#ERROR : Can't open dsspfile "2drhD.bssp"
#ERROR : Can't open dsspfile "2a8mA.bssp"
#ERROR : Can't open dsspfile "2e7fA.bssp"
#ERROR : Can't open dsspfile "1eg7B.bssp"

## Summary of PDB Search
:485
    e-101  36%  1bllE  [c.50.1 - c.56.5] LEUCINE AMINOPEPTIDASE
    7e-38  17%  1ekjB  [c.53.2] BETA-CARBONIC ANHYDRASE
    1e-37  16%  1ekjF  [c.53.2] BETA-CARBONIC ANHYDRASE
    2e-36  17%  1ekjA  [c.53.2] BETA-CARBONIC ANHYDRASE
    2e-35  16%  2a8jA  [x.x.x] THREONINE ASPARTASE 1
    2e-35  17%  1ekjD  [c.53.2] BETA-CARBONIC ANHYDRASE
    2e-32  17%  1ekjE  [c.53.2] BETA-CARBONIC ANHYDRASE
    3e-32  12%  2drhD  [x.x.x] 361AA LONG HYPOTHETICAL D-AMINOPEPTIDASE
    3e-30  14%  2a8mA  [x.x.x] THREONINE ASPARTASE 1
    8e-27  11%  2e7fA  [x.x.x] 5-METHYLTETRAHYDROFOLATE CORRINOID/IRON SULFUR
    5e-04  16%  1eg7B  [c.37.1] FORMYLTETRAHYDROFOLATE SYNTHETASE
:485

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1bllE           ----------------------------------------------------------------------
1ekjB           ----------------------------------------------------------------------
1ekjF           ----------------------------------------------------------------------
1ekjA           ----------------------------------------------------------------------
2a8jA           ----------------------------------------------------------------------
1ekjD           ----------------------------------------------------------------------
1ekjE           ----------------------------------------------------------------------
2drhD           ----------------------------------------------------------------------
2a8mA           ----------------------------------------------------------------------
2e7fA           ----------------------------------------------------------------------
1eg7B           ----------------------------------------------------------------------


                         .         .         *         .         .         .         .:140
query           xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGLKLKSYEFNIYKSKKNKE
1bllE           ---------------------------------------------------GAVLGLYEYDDLKQKRKVV
1ekjB           ----------------------------------------------------------------------
1ekjF           ----------------------------------------------------------------------
1ekjA           ----------------------------------------------------------------------
2a8jA           ----------------------------------------------------------------------
1ekjD           ----------------------------------------------------------------------
1ekjE           ----------------------------------------------------------------------
2drhD           --------------------------------------------------------------------GN
2a8mA           ----------------------------------------------------------------------
2e7fA           ----------------------------------------------------------------------
1eg7B           ----------------------------------------------------------------------


                         +         .         .         .         .         *         .:210
query           TVLINVIGNKNKISIQDHLRFKALEEGSFFARDLVSEPGNVLHPDEYAKRINTLKKFGLKINIYDEKKLK
1bllE           VSAKLH----GSEDQEAWQRGVLFASGQNLARRLMETPANEMTPTKFAEIVEENKSASIKTDIRPKSWIE
1ekjB           ----------------------------------------------------------------------
1ekjF           ----------------------------------------------------------------------
1ekjA           ----------------------------------------------------------------------
2a8jA           ----------------------------------------------------------------------
1ekjD           ----------------------------------------------------------------------
1ekjE           ----------------------------------------------------------------------
2drhD           IYKEKVLAGAFVMNGYSKPGLIQLWELGTIETPIILTNTLSIGTAVEGLLDYILENEDIGVTTGSVNPLV
2a8mA           ----------------------------------------------------------------------
2e7fA           ----------------------------------------------------------------------
1eg7B           ----------------------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           KLGMNALLGVGQGSIRGSYLVTMEWNGAKNNSNPLAFVGKGVCFDTGGYSLKPAKFMEDMTYDMAGSATV
1bllE           EQEMGSFLSVAKGSEEPPVFLEIHYKGSPNSEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATI
1ekjB           ----------------------------------------------------KSEASERIHFKKEKYDKN
1ekjF           --------------------------------------------------IPKSEASERIHFKKEKYDKN
1ekjA           ------------------------------------------------------HFKKEKYDKNPA----
2a8jA           ---------------------------------PFTNAGMGSNLNLLGEIECDASIMDGKSLNFGAVGAL
1ekjD           ------------------------------------------------------HFKKEKYDKNPA----
1ekjE           ------------------------------------------------------HFKKEKYDKNPA----
2drhD           LECNDSYLNDIRGRHVKREHVVEAIKRADEDFEEGAVGAGTG-----------MSAFEFKGGIGSASRIV
2a8mA           ---------------------------------PFTNAGMGSNLNLLGEIECDASIMDGKSLNFGAVGAL
2e7fA           -----------------------------------GDIKRAIQERDPAPVQEWARRQEEGGARALDLNVG
1eg7B           ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           VGLMKNLAIRKAKINAVGVVGLVENMVSGNAQRPGDIVKSYSGKTIEVLNTDAEGRLVLADALTFTEKKF
1bllE           CSAIVSAAKLDLPINIVGLAPLCENMPSGKANKPGDVVRARNGKTIQVDNTDAEGRLILADALCYA-HTF
1ekjB           PALYGELAKGQSPPFMV--FACSDSRVCPSHFQPGEAFVVRNVANL-VPPYDQAKYAGTGAAIEYAVLHL
1ekjF           PALYGELAKGQSPPFMV--FACSDSRVCPSHFQPGEAFVVRNVANL-VPPYDQAKYAGTGAAIEYAVLHL
1ekjA           --LYGELAKGQSPP--FMVFACSDSRVCPSHFQPGEAFVVRNVANL-VPPYDQAKYAGTGAAIEYAVLHL
2a8jA           SGIKNPVSVANRLLCEGQKGKLGRIPPCFLAYRWAVDHGIPSCPTVGAVVVDHEGNVAAAVSSG--GLAL
1ekjD           --LYGELAKGQSPPFMV--FACSDSRVCPSHFQPGEAFVVRNVANL-VPPYDQAKYAGTGAAIEYAVLHL
1ekjE           --LYGELAKGQSPPFMV--FACSDSRVCPSHFQPGEAFVVRNVANL-VPPYDQAKYAGTGAAIEYAVLHL
2drhD           EIEGKKYTV--GALVLSNFGRREDLTIAGVPVGLELKNWPGRGSIIMIIATDAPLTGRQLNRVAKRAIVG
2a8mA           SGIKNPVSVANRLLCEGQKGKLGCFLVGEGAYRWAVDHGIPSCPSVGAVVVDHEGNVAAAVSSGGLALKH
2e7fA           PAVQDKVSAMEWLVEV-----------TQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINS---TNAERE
1eg7B           ----------------------------------------------------------------------


                         .         .         .         .         *         .         .:420
query           KPKFMVDLATLTGAIIVSLGSEYAGLFSNDDKLSKQLLEAGDKVEEKLWRMPLHKNFDKLIDSKNADMQN
1bllE           NPKVIINAATLTGAMDIALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHYTRVIDCQLADVNN
1ekjB           KVSNIVVIGSACGGIKGLLSFPFDGTYSFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEEAVNASLGN
1ekjF           KVSNIVVIGSACGGIKGLLSFPFDGTYSFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEEAVNASLGN
1ekjA           KVSNIVVIGSACGGIKGLLSFPFDGTYSFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEEAVNASLGN
2a8jA           KHPGRVGQAALYGAENTGAHNPYSTAVSTS--GCGEHLVRTILARECSHALQAEDAHQALLETMQNKFIS
1ekjD           KVSNIVVIGSACGGIKGLLSFPFDGTYSFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEEAVNASLGN
1ekjE           KVSNIVVIGSACGGIKGLLSFPFDGTYSFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEEAVNASLGN
2drhD           LARTGGYAYNGSGDIAVAFSTEVIEIKALPDSVISPLFKAAEAVEEAIINSLLEARTMDGRDNHVRYALP
2a8mA           PGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHALQAEDAHQALLETMQNKFIS
2e7fA           KVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADE--FGLPMEDLYIDPLILPANVAQD
1eg7B           -------------------------------------VELYGKYKAKISLDVYRRLKDKPDGKLILVTAI


                         .         .         +         .         .         .         .:490
query           INYVGGAGSTTAAQFLQRFILNKTPWAHLDIAGMAFSKYGGALNSGGATSYGVRLLNQLIEDNYE
1bllE           IGKYRSAGACTAAAFLKEFV-THPKWAHLDIAGVMTNKDEVPYLRKGMAGRPTRTLIEFLFRFSQ
1ekjB           L---------LTYPFVREGLVNKTLALKGGYYDFV------------------------------
1ekjF           L---------LTYPFVREGLVNKTLALKGGYYDFV---KGSFELWGLEFGLSSTF----------
1ekjA           L---------LTYPFVREGL----VNKTLALKGGYYDFVKGSFELGLEFGLSSTF----------
2a8jA           SPFLSEDGVLGGVIVLRSCLLVEFLWSHTT-ESMCV-----------------------------
1ekjD           L---------LTYPFVREGL----VNKTLALKGGYYDFVKGSFELGLEFGLSSTF----------
1ekjE           L---------LTYPFVREGL----VNKTLALKGGYYDFVKGSFELGLEFGLSSTF----------
2drhD           K----------------------------------------------------------------
2a8mA           SFLASEDGVLGGVIVLRSCLLVEFLWSHESMCVGYMSAQDGKAKTHVAIEGGVCRL---------
2e7fA           HA----PEVLKTLQQIKMLA-DPAPKTVLGLSNVSQNCQNRPLINRTFLAMAMACGLDAAI----
1eg7B           TPTPAGEGKTTTSVGLTDA-LARLGKRVMEPSLGPSFGIKGGAAGGGYAQVVPM-----------