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Result of RPS:SCP for pubi0:AAZ21725.1

[Show Plain Result]

#ERROR : Can't open dsspfile "1jvsA3.bssp"
#ERROR : Can't open dsspfile "1sj7A1.bssp"
#ERROR : Can't open dsspfile "1jvsA2.bssp"
#ERROR : Can't open dsspfile "1rajA.bssp"
#ERROR : Can't open dsspfile "1jvsA1.bssp"
#ERROR : Can't open dsspfile "1vknA1.bssp"

## Summary of PDB Search
:388
    2e-47  41%  1jvsA3 [d.81.1.3] 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
    6e-27   8%  1sj7A1 [a.215.1.1] TALIN 1 A:488 -- 654
    1e-24  27%  1jvsA2 [c.2.1.3] 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
    2e-13  10%  1rajA  [e.8.1.4] GENOME POLYPROTEIN
    3e-07  23%  1jvsA1 [a.69.3.1] 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
    2e-04  21%  1vknA1 [c.2.1.3] N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE A:1
:388

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xKKIAIFGSTGSIGSSLLKIIKDDQKNFKIELLTVNKNYKKLIKQVKLFNVKNVIVTDYNSFLITTKLLK
1jvsA3          ----------------------------------------------------------------------
1sj7A1          ---------------------------ALTGTINSSMQAVQAAQATLDDFETLPPLGQDAASKAWRKNKM
1jvsA2          -KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRXVEQCLEFSPRYAVXDDEASAKLLKTXLQ
1rajA           ----------------------------------------------------------------------
1jvsA1          ----------------------------------------------------------------------
1vknA1          --RAGIIGATGYTGLELVRLLK-NHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKV------


                         .         .         *         .         .         .         .:140
query           NAKVKVFNNFDSLNKIFNTNNKIDYSMCAISGFDGLKPTLDIIKFTKTIAIANKESIICGWNLIKKDLKK
1jvsA3          -------------------------------------------------------SLVTCGRLFXDAVKQ
1sj7A1          EIHSQVDAITANLTAGDPAETDYTAVGCAVTTISSNLTE---MSRGVKLLAALLEDEGGNGRPLLQAAKG
1jvsA2          QQRTEVLSG-QQAACDXAALEDVDQVXAAIVGAAGLLPTLAAIRAGKTILLANKEXRTPIAHT-XAWPNR
1rajA           --------------------------------------------------------------YMKEAVDH
1jvsA1          ----------------------------------------------------------------------
1vknA1          ----------------------------------------------------------------------


                         +         .         .         .         .         *         .:210
query           YKTYFVPVDSEHFSIWSLLDNNKKNNFEKIYITASGGPFRNLSLKKFRNISVKDALKHPNWSMGKKITID
1jvsA3          SKAQLLPVDSEHNAIFQSLPQPEQNGVVSILLTGSGGPFRETPLRDLATXTPDQACRHPNWSXGRKISVD
1sj7A1          LAGAVSELLRSAQPASAEPRQNLLQAAGNV-GQASGELLQ------------------------------
1jvsA2          VNSGVKPLD-------------------------------------------------------------
1rajA           YAGQLMSLDINTEAFHKNPGVDPDLFWSKIPVLMEEKLFAF-------DYTGYDASLSPAWFEALKMVLE
1jvsA1          ----------------------------------------------------------------------
1vknA1          ----------------------------------------------------------------------


                         .         .         .         +         .         .         .:280
query           SATMMNKVFEIIEAKKIFNLNYKQLEILIHPKSYLHAIVKFNNGLSKLLVHDTNMTIPIFNSIYFNTDKK
1jvsA3          SATXXNKGLEYIEARWLFNASASQXEVLIHPQSVIHSXVRYQDG--------------------------
1sj7A1          ----------------------------------------------------------------------
1jvsA2          ----------------------------------------------------------------------
1rajA           KTSIFNSMINNLIIKTYKGIDLDHLKMIAYGDDVIASYPHEVDA-----SLLAQSGKDYGLTMTP-ADKS
1jvsA1          ----------------------------------------------------------------------
1vknA1          ----------------------------------------------------------------------


                         .         *         .         .         .         .         +:350
query           LKSXXXXXXXXXXXXXXXXXXXRFPVIKILNNLSNEDSLFETIIVSANDKLVKLFLNNKIKFNDISNTLI
1jvsA3          ----------------------------------------------------------------------
1sj7A1          ----------------------------------------------------------------------
1jvsA2          ----------------------------------------------------------------------
1rajA           ATFETVTWENVTFLKRFFRADEKYPFLIHMPMKEIHESIPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIR
1jvsA1          ----------------------RYPCLKLAXEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNL
1vknA1          ----------------------------------------------------------------------


                         .         .         .         .         *         .         .:420
query           KICNTPEFNKFKSMKPRNIDEIxxxxxxxxxxxxxxxx
1jvsA3          --------------------------------------
1sj7A1          --------------------------------------
1jvsA2          --------------------------------------
1rajA           SVPI----------------------------------
1jvsA1          SVLEKXD-----XREPQCVDDV----------------
1vknA1          --------------------------------------