[GTOP][HELP][ORGANISMS][SEARCH][SUMMARY][COMMENT/QUESTION(gtop-admin@spock.genes.nig.ac.jp)]

Result of RPS:PDB for sent8:ACF69930.1

[Show Plain Result]

#ERROR : Can't open dsspfile "2a6oA.bssp"
#ERROR : Can't open dsspfile "2ec2A.bssp"
#ERROR : Can't open dsspfile "2ec2B.bssp"
#ERROR : Can't open dsspfile "2ec2E.bssp"
#ERROR : Can't open dsspfile "2a6mB.bssp"
#ERROR : Can't open dsspfile "2ec2F.bssp"
#ERROR : Can't open dsspfile "2a6mA.bssp"
#ERROR : Can't open dsspfile "2ec2D.bssp"

## Summary of PDB Search
:152
    1e-35  29%  2a6oA  [x.x.x] ISHP608 TRANSPOSASE
    9e-35  37%  2ec2A  [x.x.x] 136AA LONG HYPOTHETICAL TRANSPOSASE
    3e-34  36%  2ec2B  [x.x.x] 136AA LONG HYPOTHETICAL TRANSPOSASE
    7e-34  36%  2ec2E  [x.x.x] 136AA LONG HYPOTHETICAL TRANSPOSASE
    9e-34  32%  2a6mB  [x.x.x] ISHP608 TRANSPOSASE
    6e-33  35%  2ec2F  [x.x.x] 136AA LONG HYPOTHETICAL TRANSPOSASE
    1e-32  35%  2a6mA  [x.x.x] ISHP608 TRANSPOSASE
    1e-30  37%  2ec2D  [x.x.x] 136AA LONG HYPOTHETICAL TRANSPOSASE
:152

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPP
2a6oA           ----KSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEIIEMQTDKDHIHILADIDP
2ec2A           --EYKSTRHAKYLCNYHFVWIPKYRRKVLTGEVAEYTKEVLRTIAEELGCEVLALEVMPDHIHLFVNCPP
2ec2B           --EYKSTRHAKYLCNYHFVWIPKYRRKVLTGEVAEYTKEVLRTIAEELGCEVLALEVMPDHIHLFVNCPP
2ec2E           --EYKSTRHAKYLCNYHFVWIPKYRRKVLTGEVAEYTKEVLRTIAEELGCEVLALEVMPDHIHLFVNCPP
2a6mB           ----KSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEIIEMQTDKDHIHILADIDP
2ec2F           --EYKSTRHAKYLCNYHFVWIPKYRRKVLTGEVAEYTKEVLRTIAEELGCEVLALEVMPDHIHLFVNCPP
2a6mA           ----KSNHNVVYSCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEIIEMQTDKDHIHILADIDP
2ec2D           --EYKSTRHAKYLCNYHFVWIPKYRRKVLTGEVAEYTKEVLRTIAEELGCEVLALEVMPDHIHLFVNCPP


                         .         .         *         .         .         .         .:140
query           KMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLS
2a6oA           SFGVMKFIKTAKGRSSRILRQEFNHL--KTKLPTLWTNSCFISTVGGAPNVVKQYIENQQNSNRPKQKEK
2ec2A           RYAPSYLANYFKGKSARLILKKFQELK-KSTNGKLWTRSYFVSTSGVSSETIKKYIEEQ-----------
2ec2B           RYAPSYLANYFKGKSARLILKKFQELK-KSTNGKLWTRSYFVSTSGVSSETIKKYIEEQWAK--------
2ec2E           RYAPSYLANYFKGKSARLILKKFQEL-KKSTNGKLWTRSYFVSTSGVSSETIKKYIEEQ-----------
2a6mB           SFGVMKFIKTAKGRSSRILRQEFNHLKTKLPT--LWTNSCFISTVGGAPNVVKQYIENQQNSNRPKQKEK
2ec2F           RYAPSYLANYFKGKSARLILKKFQELKKSTNGK-LWTRSYFVSTSGVSSETIKKYIEEQ-----------
2a6mA           SFGVMKFIKTAKGRSSRILRQEFNHLKTKLPT--LWTNSCFISTVGGAPLNVKQYIENQ-----------
2ec2D           RYAPSYLANYFKGKSARLILKKFQELK-KSTNGKLWTRSYFVSTSGNVSETIKKYIEEQ-----------


                         +         .         .         .         .         *         .:210
query           IPYPGSPFTGRx
2a6oA           WKSYVDNLQTK-
2ec2A           ------------
2ec2B           ------------
2ec2E           ------------
2a6mB           ------------
2ec2F           ------------
2a6mA           ------------
2ec2D           ------------