[GTOP][HELP][ORGANISMS][SEARCH][SUMMARY][COMMENT/QUESTION(gtop-admin@spock.genes.nig.ac.jp)]

Result of RPS:PDB for tfus0:AAZ56387.1

[Show Plain Result]

#ERROR : Can't open dsspfile "2a4xA.bssp"
#ERROR : Can't open dsspfile "3e5dA.bssp"
#ERROR : Can't open dsspfile "2a4wB.bssp"
#ERROR : Can't open dsspfile "1bylA.bssp"
#ERROR : Can't open dsspfile "2a4wA.bssp"
#ERROR : Can't open dsspfile "1cjxA.bssp"
#ERROR : Can't open dsspfile "2ei1A.bssp"
#ERROR : Can't open dsspfile "3bt3A.bssp"
#ERROR : Can't open dsspfile "1bh5B.bssp"
#ERROR : Can't open dsspfile "2ei3A.bssp"
#ERROR : Can't open dsspfile "2ei0A.bssp"
#ERROR : Can't open dsspfile "3bqxA.bssp"
#ERROR : Can't open dsspfile "3b59A.bssp"
#ERROR : Can't open dsspfile "1bh5A.bssp"
#ERROR : Can't open dsspfile "2ei2A.bssp"
#ERROR : Can't open dsspfile "1ecsA.bssp"
#ERROR : Can't open dsspfile "2ehzA.bssp"
#ERROR : Can't open dsspfile "1dhyA.bssp"
#ERROR : Can't open dsspfile "2c21A.bssp"
#ERROR : Can't open dsspfile "3ecjB.bssp"
#ERROR : Can't open dsspfile "3ct8A.bssp"
#ERROR : Can't open dsspfile "3e0rB.bssp"

## Summary of PDB Search
:134
    3e-12  15%  2a4xA  [x.x.x] MITOMYCIN-BINDING PROTEIN
    7e-12  19%  3e5dA  [x.x.x] PUTATIVE GLYOXALASE I
    9e-12  17%  2a4wB  [x.x.x] MITOMYCIN-BINDING PROTEIN
    5e-10  11%  1bylA  [d.32.1] PROTEIN (BLEOMYCIN RESISTANCE PROTEIN)
    5e-10  15%  2a4wA  [x.x.x] MITOMYCIN-BINDING PROTEIN
    8e-10  15%  1cjxA  [d.32.1 - d.32.1] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE
    2e-09  15%  2ei1A  [x.x.x] 1,2-DIHYDROXYNAPHTHALENE DIOXYGENASE
    2e-09  14%  3bt3A  [x.x.x] GLYOXALASE-RELATED ENZYME, ARAC TYPE
    4e-09  15%  1bh5B  [d.32.1] LACTOYLGLUTATHIONE LYASE
    6e-09  14%  2ei3A  [x.x.x] 1,2-DIHYDROXYNAPHTHALENE DIOXYGENASE
    1e-08  15%  2ei0A  [x.x.x] 1,2-DIHYDROXYNAPHTHALENE DIOXYGENASE
    1e-08  15%  3bqxA  [x.x.x] GLYOXALASE-RELATED ENZYME
    3e-08  24%  3b59A  [x.x.x] GLYOXALASE/BLEOMYCIN RESISTANCE
    4e-08  15%  1bh5A  [d.32.1] LACTOYLGLUTATHIONE LYASE
    7e-08  15%  2ei2A  [x.x.x] 1,2-DIHYDROXYNAPHTHALENE DIOXYGENASE
    8e-08  14%  1ecsA  [d.32.1] BLEOMYCIN RESISTANCE PROTEIN
    1e-07  14%  2ehzA  [x.x.x] 1,2-DIHYDROXYNAPHTHALENE DIOXYGENASE
    1e-07  18%  1dhyA  [x.x.x] 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE
    2e-07  16%  2c21A  [x.x.x] TRYPANOTHIONE-DEPENDENT GLYOXALASE I
    2e-07  18%  3ecjB  [x.x.x] PROTEIN (HOMOPROTOCATECHUATE 2,3-DIOXYGENASE)
    3e-07  16%  3ct8A  [x.x.x] PUTATIVE GLYOXALASE
    4e-05   7%  3e0rB  [x.x.x] C3-DEGRADING PROTEINASE (CPPA PROTEIN)
:134

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           MTRKIFVNVAVQDLQKSQEFFTALGFRFDPRFTDTNAACMVINDDCAVMLLXXXXXXXXXXKELVDAAKN
2a4xA           ------FAVVVEDMAKSLEFYRKGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQ--APTGG
3e5dA           ------VALWTTNLEQKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEISRTDVTGKT--TGENL
2a4wB           ------FAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGH
1bylA           AKLTSAPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDDVTLFISAVQDQ--------VVPDNTLA
2a4wA           ------FAVVVEDMAKSLEFYRKGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQ--APTGG
1cjxA           -----FIEFASPTPGTLEPIFEIMGFTKVATHRSKNVHLYRQGEINLILNNEPN-------SIASYFAAE
2ei1A           ------CIVRQTDVAEAHKFYSLLGFRGDVEYRIPTAELSFMHCNARDHSIAFGA----------MPAAK
3bt3A           YVVRENPVYFTKDMDKTVKWFEELGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHP-----FRGFHLFKG
1bh5B           ------TMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMIAWALSRKATLELTHNWGTEDDETQSYHNGNS
2ei3A           AVIELYMGISVKDPDAWKSFATDLGLQVLDEGEKDRFYLRMDYWHHRIVV--------------HHNGQD
2ei0A           ------MGISVKDPDAWKSFATDLGLQVLDEGEKDRFYLRMDYWHHRI--------------VVHHNGQD
3bqxA           LQQVAVITLGIGDLEASARFYGEFGWAPVFRNPEIIFYQNGFVLATWLVQNLQ--------EDVGVAVTS
3b59A           VTEIRYVGYGVKDFDAEKAFYADWGLEPVGEDANNAWFKAQGADEHHVV-------------QLRRADEN
1bh5A           ------TMLRVKDPKKSLDFYTRVLGKCDFPIMKFSLYFLAYEDKNDIPKLTHNWGTEDDETQSYHNGNS
2ei2A           ------MGISVKDPDAWKSFATDLGLQVLDEGEKDRFYLRMDYWHHRI--------------VVHHNGQD
1ecsA           -TDQATPNLPSRDFDSTAAFYERLGFGIVFRDAGW--MILQRGDLMLEFFAHPGLDPLASWFSCCLRLDD
2ehzA           AVIELYMGISVKDPDAWKSFATDLGLQVLDEGEKDRFYLRMDYWHHRI--------------VVHHNGQD
1dhyA           -----HFVRCVPDTAKAMAFYTVLGFVLSDIIDIVPAHFLHCNGRHHTIALAA------------FPIPK
2c21A           ------TMIRVGDLDRSIKFYTELGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDE
3ecjB           ------AELVVTDLAKSRNFYVDLGLHVSYEDENQIYLRSFEEFIHHNL-------------VLTKGPVA
3ct8A           YFQGLHVEINVDHLEESIAFWDWLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTF---HRKRT
3e0rB           ------PTLKANNRKLNETFYIET-LGKALLEESAFLSLGDQTGLEKLVLEEA--------PSRTRKVEG


                         .         .         *         .         .         .         .:140
query           TESIISVSADRKEEVDELVNRAFEAGARPSIDPIENEGMYAWGFQDLDGHLWEVVWMDPRALEA
2a4xA           HRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNVWGQRYAIVKDPDGNVVDLFAPLPL----
3e5dA           GWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRTGDGYYESVVLDPEGNRIEITW--------
2a4wB           RFAI-AFEFPDTASVDKKYAELVDAGYEGHLKPWNVWGQRYAIVKDPDGNVVDLFAPLP-----
1bylA           WVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGREFALRDPAGNCVHFVA--------
2a4wA           HRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNVWGQRYAIVKDPDGNVVDLF---------
1cjxA           HGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFG-----
2ei1A           RLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGINDKALTFYGATPSGWLIEPGWRGATA---
3bt3A           EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYQPWGARECSITTTDGCILRFFE--------
1bh5B           DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIQILNPNKMA---
2ei3A           DLEYLGWRVAGKPEFEALGQKLIDAGYKDKVEAQERMVLGLMKTEDPGGNPTEIFWGPR-----
2ei0A           DLEYLGWRVAGKPEFEALGQKLIDAGYKDKVEAQERMVLGLMKTEDPGGNPTEIFWGPR-----
3bqxA           RPGSALAHNVRAETEVAPLERLVAAGGQLLRPADAPHGGLRGYVADPDGHIWEIAFNPVWP---
3b59A           RIDVIALAADSRSDVDALRASVEAAGCKEPAVLATPGGGYGFRFFSPDGLLFEVSSD-------
1bh5A           DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIQILNPNKMA---
2ei2A           DLEYLGWRVAGKPEFEALGQKLIDAGYKDKVEAQERMVLGLMKTEDPGGNPTEIFWGPR-----
1ecsA           LAEFY-------RQCKSVGIQETSSGYPRIHAPELGWGGTMAALVDPDGTLLRLIQNE------
2ehzA           DLEYLGWRVAGKPEFEALGQKLIDAGYKDKVEAQERMVLGLMKTEDPGGNPTEIFWGP------
1dhyA           RIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHNDQTLSFYADTPSPMIEVEFGWGPR----
2c21A           AYGHIAIGVE---DVKELVADMRKHDVPIDYED---ESGFMAFVVDPDGYYIELLNEKTMMEKA
3ecjB           ALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGDALRVEDPLGFPYEFFFE-------
3ct8A           GLNHLAFHAASREKVDELTQKLKERGDPILYEDRHGPNHYAVFCEDPNRIKVEIV---------
3e0rB           RKKLLIVKVENPLEIEGILSKT-----DSIHRLYKGQNGYAFEIFSPEDDLILIHAEDDI----