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Result of BLT:PDB for tthe0:AAS81728.1

[Show Plain Result]

#ERROR : Can't open dsspfile "1sroA.bssp"
#ERROR : Can't open dsspfile "2k4kA.bssp"
#ERROR : Can't open dsspfile "1yz6A.bssp"
#ERROR : Can't open dsspfile "2oceA.bssp"
#ERROR : Can't open dsspfile "3bzkA.bssp"
#ERROR : Can't open dsspfile "3bzcA.bssp"
#ERROR : Can't open dsspfile "2c4rL.bssp"

## Summary of PDB Search
:142
    6e-13  46%  1sroA  [x.x.x] PNPASE
    5e-10  38%  2k4kA  [x.x.x] GENERAL STRESS PROTEIN 13
    2e-09  43%  1yz6A  [x.x.x] PROBABLE TRANSLATION INITIATION FACTOR 2 ALPHA
    1e-06  32%  2oceA  [x.x.x] HYPOTHETICAL PROTEIN PA5201
    1e-06  32%  3bzkA  [x.x.x] TEX
    1e-06  32%  3bzcA  [x.x.x] TEX
    1e-04  40%  2c4rL  [x.x.x] RIBONUCLEASE E
:142

## Multiple Alignment
                         .         .         .         .         +         .         .:70
query           xxxxxxxxxxxxxxxxxxELEAGTXXXXXXXXXXSFGAFVELAGGEQGLVHISQIAHEYVTNVRDYLNEG
1sroA           ------------------EIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMG
2k4kA           ------------------KFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINEHLSVG
1yz6A           ----------------------------------NYGAFLELDEGKEAFMHISEVASTWVRNIRDYLKEG
2oceA           ------------------DLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAG
3bzkA           ------------------DLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAG
3bzcA           ------------------DLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAG
2c4rL           -------------------------------------AFVDYGAERHGFLPLKEIAREYFPNIKDVLREG


                         .         .         *         .         .         .         .:140
query           DIVQVLIKGRDAKGRLDLSIKDLTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1sroA           QEVPVKVLEVDRQGRIRLSIKE------------------------------------------------
2k4kA           DEVQVKVLAVDEKGKISLSIR-------------------------------------------------
1yz6A           QVVAKVIRVDPRKGHIDLSLRRVT----------------------------------------------
2oceA           DIVKVKVMEVDPRNRVGLSMR-------------------------------------------------
3bzkA           DIVKVKVMEVDPRNRVGLSMR-------------------------------------------------
3bzcA           DIVKVKVMEVDPRNRVGLSMR-------------------------------------------------
2c4rL           QIVQIDKEERGNKG--------------------------------------------------------


                         +         .         .         .         .         *         .:210
query           xx
1sroA           --
2k4kA           --
1yz6A           --
2oceA           --
3bzkA           --
3bzcA           --
2c4rL           --