RPS-BLAST 2.2.16 [Mar-25-2007]

Database: Pfam-A 
           11,912 sequences; 2,039,872 total letters

Searching..................................................done

Query= BAB81146.1 cper0 asrA.1 GIB00075CH01 "anaerobic sulfite
reductase subunit A"
         (338 letters)



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PF05577 Peptidase_S28 "Serine carboxypeptidase S28"                    34   4e-04

>PF05577 Peptidase_S28 "Serine carboxypeptidase S28"
          Length = 411

 Score = 33.5 bits (76), Expect = 4e-04
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 237 TCFTMQDVFYKDNENAGERRRVWASCQVDGYTDMAGG 273
           T + + D  Y D+ NAG+R+  W +C   GY   A G
Sbjct: 277 TSYQLLDTSYDDSSNAGDRQWTWQTCTEFGYFQTANG 313


  Database: Pfam-A
    Posted date:  Oct 30, 2009  9:48 AM
  Number of letters in database: 2,039,872
  Number of sequences in database:  11,912
  
Lambda     K      H
   0.315    0.136    0.368 

Gapped
Lambda     K      H
   0.267   0.0582    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11912
Number of Hits to DB: 14,321,961
Number of extensions: 805401
Number of successful extensions: 106540
Number of sequences better than 1.0e-03: 10
Number of HSP's gapped: 2259
Number of HSP's successfully gapped: 210
Length of database: 100,000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.8 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)