BLASTP 2.2.16 [Mar-25-2007]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AAZ21181.1 pubi0 AAZ21181.1 GIB00256CH01 "putative porin"
(329 letters)
Database: sws57.9x
510,076 sequences; 179,409,320 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ICEK_PSESX RecName: Full=Ice nucleation protein; 40 4e-05
ICEN_PSEFL RecName: Full=Ice nucleation protein; 39 6e-05
ICEN_PANAN RecName: Full=Ice nucleation protein inaU; 37 2e-04
ICEN_PSESY RecName: Full=Ice nucleation protein; 36 4e-04
HMU_HALWD RecName: Full=Halomucin;Flags: Precursor; 35 7e-04
>ICEK_PSESX RecName: Full=Ice nucleation protein;
Length = 1148
Score = 39.7 bits (91), Expect = 4e-05
Identities = 44/176 (25%), Positives = 67/176 (38%), Gaps = 36/176 (20%)
Query: 146 FGAIGSAGSNNMMR--YDNT-TAVEGLKISASYVPSGTGEVESSVDYGLEYTGYEG---- 198
+G+ ++G ++ + Y +T TA EG ++A Y +GT V+SS+ G T G
Sbjct: 270 YGSTQTSGGDSSLTAGYGSTQTAQEGSNLTAGYGSTGTAGVDSSLIAGYGSTQTSGSDSA 329
Query: 199 LTLGYAMGENNAAGGTSNTDNDTMYVKYAYGPVTVGYQKSEIXXXXXXXXXXXXXYGVTY 258
LT GY + G + GY ++ T
Sbjct: 330 LTAGYGSTQTAQEGSNLXXXXXXXXXXXXXXXLIAGYGSTQ-----------------TS 372
Query: 259 AVSDSLSVGYAESTYDAGSSTTDQENSNLSVSYTQGG-----MTLAAGFAEEKNRG 309
SL+ GY GS+ T QE SNL+ Y G +L AG+ + G
Sbjct: 373 GSDSSLTAGY-------GSTQTAQEGSNLTAGYGSTGTAGVDSSLIAGYGSTQTSG 421
>ICEN_PSEFL RecName: Full=Ice nucleation protein;
Length = 1210
Score = 38.9 bits (89), Expect = 6e-05
Identities = 62/185 (33%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 146 FGAIGSAGSNNMM--RYDNTTAVEG-LKISASYVPSGTGEVESSVDYGLEYTGYEG---- 198
+G+ G+AGS++ + Y +T G ++A Y + T +V S++ G TG G
Sbjct: 215 YGSTGTAGSDSSLIAGYGSTQTAGGDSSLTAGYGSTQTAQVGSNLTAGYGSTGTAGPDSS 274
Query: 199 LTLGYAMGENNAAGGTSNTDNDTMYVKYAYGPVTVGYQKSEIXXXXXXXXXXXXX----- 253
L GY G AGG S+ + YG S++
Sbjct: 275 LIAGY--GSTQTAGGESS-------LTAGYGSTQTAQVGSDLXXXXXXXXXXXXXXXLIA 325
Query: 254 -YGVTYAVS--DSLSVGYAESTYDAGSSTTDQENSNLSVSYTQGG-----MTLAAGFAEE 305
YG T SL+ GY GS+ T Q SNL+ Y G +L AG+
Sbjct: 326 GYGSTQTAGGDSSLTAGY-------GSTQTAQVGSNLTAGYGSTGTAGPDSSLIAGYGST 378
Query: 306 KNRGG 310
+ GG
Sbjct: 379 QTAGG 383
>ICEN_PANAN RecName: Full=Ice nucleation protein inaU;
Length = 1034
Score = 37.4 bits (85), Expect = 2e-04
Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 32/196 (16%)
Query: 132 TVDNGGVTSTASTLFGAIGSAGSNNMMRYDNTTAVEGLKISASYVPSGTGEVESS--VDY 189
+ + G +ST +G+ G+AGS++ + A Y + T ESS Y
Sbjct: 182 STETAGDSSTLIAGYGSTGTAGSDS-------------TLVAGYGSTQTAGEESSQMAGY 228
Query: 190 GLEYTGYEGLTLGYAMGENNAAG---------GTSNTDNDTMYVKYAYGPVTVGYQKSEI 240
G TG +G L G AG G++ T + + YG + S++
Sbjct: 229 GSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDL 288
Query: 241 XXXXXXXXXXXXXYGVTYAVSDSLSVGYAESTYDA--GSSTTDQENSNLSVSYTQGG--- 295
+ + + G EST A GS+ T Q+ S+L+ Y G
Sbjct: 289 XXXXXXXXXXXXXXXLIAGYGSTQTAG-EESTQTAGYGSTQTAQKGSDLTAGYGSTGTAG 347
Query: 296 --MTLAAGFAEEKNRG 309
+L AG+ + G
Sbjct: 348 DDSSLIAGYGSTQTAG 363
>ICEN_PSESY RecName: Full=Ice nucleation protein;
Length = 1200
Score = 36.2 bits (82), Expect = 4e-04
Identities = 43/176 (24%), Positives = 66/176 (37%), Gaps = 36/176 (20%)
Query: 146 FGAIGSAGSNNMMR--YDNT-TAVEGLKISASYVPSGTGEVESSVDYGLEYTGYEG---- 198
+G+ ++G ++ + Y +T TA EG ++A Y +GT V+SS+ G T G
Sbjct: 322 YGSTQTSGGDSSLTAGYGSTQTAQEGSNLTAGYGSTGTAGVDSSLIAGYGSTQTSGSDSA 381
Query: 199 LTLGYAMGENNAAGGTSNTDNDTMYVKYAYGPVTVGYQKSEIXXXXXXXXXXXXXYGVTY 258
LT GY + G + GY ++ T
Sbjct: 382 LTAGYGSTQTAQEGSNLXXXXXXXXXXXXXXXLIAGYGSTQ-----------------TS 424
Query: 259 AVSDSLSVGYAESTYDAGSSTTDQENSNLSVSYTQGG-----MTLAAGFAEEKNRG 309
SL+ GY GS+ T QE S L+ Y G +L AG+ + G
Sbjct: 425 GSDSSLTAGY-------GSTQTAQEGSILTAGYGSTGTAGVDSSLIAGYGSTQTSG 473
>HMU_HALWD RecName: Full=Halomucin;Flags: Precursor;
Length = 9159
Score = 35.4 bits (80), Expect = 7e-04
Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 14/155 (9%)
Query: 128 IISNTVDNGGVTSTASTLFGAIGSAGSNNMMRYDNTTAVEGLKISASYVPSGTGEVESSV 187
I++N G VT+T + G IG + ++R N TA + V G+ ++S+
Sbjct: 2341 IVANASATGNVTTTGQRVGGLIGYHRTGTILR--NVTATGDVSTDGQRVGGLVGDTDASI 2398
Query: 188 D----YGLEYTGYEGLTLGYAMGENNAAGGTSNTDNDTMYVKYAYGPVTVGYQKSEIXXX 243
G T G +G +G+ A G N T + G VG +
Sbjct: 2399 TDASATGEVTTSTTGEYVGGLVGQLRAQHGDEEVRNVTASGNVSSGGQYVGGLMGYVDDN 2458
Query: 244 XXXXXXXXXXYGVTYAVSDSLSVGYAESTYDAGSS 278
G A+S++ + G +TYD GS+
Sbjct: 2459 NNE--------GRYVAMSEAHATGNVNTTYDGGSN 2485
Database: sws57.9x
Posted date: Nov 5, 2009 10:46 AM
Number of letters in database: 179,409,320
Number of sequences in database: 510,076
Lambda K H
0.314 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 510076
Number of Hits to DB: 8,433,866,562
Number of extensions: 345252627
Number of successful extensions: 977602
Number of sequences better than 1.0e-03: 25324
Number of HSP's gapped: 933865
Number of HSP's successfully gapped: 31598
Length of database: 100,000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.8 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.0 bits)