BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ACF66015.1 sent8 ACF66015.1 GIB00763CH01 "invasion protein
IagB"
         (160 letters)

Database: 95pdb09Oct16x 
           66,450 sequences; 15,983,541 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1jugA [x.x.x] LYSOZYME                                                 35   2e-04
1jhlA [d.2.1] PHEASANT EGG WHITE LYSOZYME                              34   3e-04
1ghlA [d.2.1] PHEASANT EGG WHITE LYSOZYME                              34   3e-04

>1jugA [x.x.x] LYSOZYME
          Length = 125

 Score = 34.7 bits (78), Expect = 2e-04
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query: 40 AQQESAMKPGAIGHNRDGSTDLGLMQINS 68
          A  ES+    A  HN DGSTD G++QINS
Sbjct: 32 AFHESSYNTRATNHNTDGSTDYGILQINS 60


>1jhlA [d.2.1] PHEASANT EGG WHITE LYSOZYME
          Length = 129

 Score = 34.3 bits (77), Expect = 3e-04
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query: 40 AQQESAMKPGAIGHNRDGSTDLGLMQINS 68
          A+ ES    GA   N DGSTD G++QINS
Sbjct: 32 AKFESNFNTGATNRNTDGSTDYGILQINS 60


>1ghlA [d.2.1] PHEASANT EGG WHITE LYSOZYME
          Length = 130

 Score = 34.3 bits (77), Expect = 3e-04
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query: 40 AQQESAMKPGAIGHNRDGSTDLGLMQINS 68
          A+ ES    GA   N DGSTD G++QINS
Sbjct: 33 AKFESNFNTGATNRNTDGSTDYGILQINS 61


  Database: 95pdb09Oct16x
    Posted date:  Nov 2, 2009  3:15 PM
  Number of letters in database: 15,983,541
  Number of sequences in database:  66,450
  
Lambda     K      H
   0.324    0.137    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 66450
Number of Hits to DB: 776,772,209
Number of extensions: 30569203
Number of successful extensions: 74284
Number of sequences better than 1.0e-03: 1171
Number of HSP's gapped: 73422
Number of HSP's successfully gapped: 1305
Length of database: 100,000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.1 bits)