BLASTP 2.2.16 [Mar-25-2007]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ACF65947.1 sent8 ACF65947.1 GIB00763CH01 "hydrogenase-1 operon
protein HyaF2"
(353 letters)
Database: sws57.9x
510,076 sequences; 179,409,320 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
HOXQ_RALEH RecName: Full=Hydrogenase expression/formation protei... 168 6e-44
HYAF_ECOLI RecName: Full=Hydrogenase-1 operon protein hyaF; 135 7e-34
HUPH_RHOCA RecName: Full=Hydrogenase expression/formation protei... 123 3e-30
HOXQ_AZOVI RecName: Full=Hydrogenase expression/formation protei... 121 1e-29
HUPQ_AZOCH RecName: Full=Hydrogenase expression/formation protei... 120 1e-29
HUPH_RHILV RecName: Full=Hydrogenase expression/formation protei... 108 9e-26
HUPH_BRAJA RecName: Full=Hydrogenase expression/formation protei... 101 9e-24
RUBR_AZOVI RecName: Full=Rubredoxin; Short=Rd; 79 6e-17
RUBL_RHILV RecName: Full=Probable rubredoxin hupI; 79 8e-17
RUBR_RALEH RecName: Full=Rubredoxin; Short=Rd; 77 2e-16
RUBL_BRAJA RecName: Full=Probable rubredoxin hupI; 77 3e-16
RUBR_AZOCH RecName: Full=Rubredoxin in uptake hydrogenase operon; 76 5e-16
HUPJ_RHOCA RecName: Full=Probable rubredoxin hupJ; 67 2e-13
RUBR1_METJA RecName: Full=Probable rubredoxin 1; Short=R... 66 5e-13
NORV_SALPA RecName: Full=Anaerobic nitric oxide reductase flavor... 63 4e-12
NORV_SALTI RecName: Full=Anaerobic nitric oxide reductase flavor... 62 8e-12
NORV_SALPB RecName: Full=Anaerobic nitric oxide reductase flavor... 62 8e-12
NORV_SALAR RecName: Full=Anaerobic nitric oxide reductase flavor... 62 8e-12
NORV_ENT38 RecName: Full=Anaerobic nitric oxide reductase flavor... 62 1e-11
NORV_SHISS RecName: Full=Anaerobic nitric oxide reductase flavor... 61 1e-11
NORV_ECOHS RecName: Full=Anaerobic nitric oxide reductase flavor... 61 1e-11
NORV_SALTY RecName: Full=Anaerobic nitric oxide reductase flavor... 61 2e-11
NORV_SHIFL RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_SHIF8 RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_SHIDS RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_SHIBS RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECOUT RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECOSM RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECOLI RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECOLC RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECOL6 RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECOL5 RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECOK1 RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECODH RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECO57 RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_ECO24 RecName: Full=Anaerobic nitric oxide reductase flavor... 60 2e-11
NORV_SALCH RecName: Full=Anaerobic nitric oxide reductase flavor... 60 4e-11
NORV_CITK8 RecName: Full=Anaerobic nitric oxide reductase flavor... 59 6e-11
NORV_KLEP7 RecName: Full=Anaerobic nitric oxide reductase flavor... 59 8e-11
RUBR_CLOTS RecName: Full=Rubredoxin; Short=Rd; 58 1e-10
RUBR_ANASP RecName: Full=Rubredoxin; Short=Rd; 58 1e-10
RUBR_METTH RecName: Full=Probable rubredoxin; Short=RD; 57 2e-10
RUBR_ANAVT RecName: Full=Rubredoxin; Short=Rd; 57 2e-10
NORV_ERWCT RecName: Full=Anaerobic nitric oxide reductase flavor... 57 2e-10
NORV_SERP5 RecName: Full=Anaerobic nitric oxide reductase flavor... 57 3e-10
HRB_MOOTA RecName: Full=High molecular weight rubredoxin;AltName... 57 3e-10
NORV_PECCP RecName: Full=Anaerobic nitric oxide reductase flavor... 56 5e-10
RUBR_DESGI RecName: Full=Rubredoxin; Short=Rd; 55 7e-10
RUBR2_CLOPE RecName: Full=Rubredoxin 2; Short=Rd 2; 55 1e-09
RUBR1_CHLTE RecName: Full=Rubredoxin 1; Short=Rd 1; 54 2e-09
RUBR2_CHLTE RecName: Full=Rubredoxin 2; Short=Rd 2; 54 2e-09
RUBR1_CLOPE RecName: Full=Rubredoxin 1; Short=Rd 1; 54 2e-09
RUBR_TREPA RecName: Full=Rubredoxin; Short=Rd; 54 3e-09
RUBR_PYRFU RecName: Full=Rubredoxin; Short=Rd; 54 3e-09
RUBR2_PSEOL RecName: Full=Rubredoxin 2;AltName: Full=Two-iron ru... 54 3e-09
NORV_AERS4 RecName: Full=Anaerobic nitric oxide reductase flavor... 54 3e-09
RUBR_BUTME RecName: Full=Rubredoxin; Short=Rd; 53 4e-09
NORV_AERHH RecName: Full=Anaerobic nitric oxide reductase flavor... 53 4e-09
RUBR_HELMO RecName: Full=Rubredoxin; Short=Rd; 52 6e-09
RUBR1_DESDA RecName: Full=Rubredoxin 1; Short=Rd-1; 52 6e-09
RUBR_PYRAB RecName: Full=Rubredoxin; Short=Rd; 52 1e-08
RUBR_SYNY3 RecName: Full=Rubredoxin; Short=Rd; 51 1e-08
RUBR_CLOAB RecName: Full=Rubredoxin; Short=Rd; 51 1e-08
RUBR_CLOST RecName: Full=Rubredoxin; Short=Rd; 51 2e-08
NORV_VIBVY RecName: Full=Anaerobic nitric oxide reductase flavor... 51 2e-08
NORV_VIBVU RecName: Full=Anaerobic nitric oxide reductase flavor... 51 2e-08
RUBR_CHLLT RecName: Full=Rubredoxin; Short=Rd; 50 2e-08
RUBR2_METJA RecName: Full=Probable rubredoxin 2; Short=R... 50 2e-08
RUBR_DESVH RecName: Full=Rubredoxin; Short=Rd; 50 4e-08
RUBR_MEGEL RecName: Full=Rubredoxin; Short=Rd; 49 5e-08
RUBR_CLOPA RecName: Full=Rubredoxin; Short=Rd; 49 5e-08
NORV_VIBF1 RecName: Full=Anaerobic nitric oxide reductase flavor... 49 5e-08
RUBR_ACIAD RecName: Full=Rubredoxin; Short=Rd; 49 7e-08
RUBR3_CHLTE RecName: Full=Rubredoxin 3; Short=Rd 3; 49 7e-08
NORV_ALISL RecName: Full=Anaerobic nitric oxide reductase flavor... 49 7e-08
RUBR2_DESDA RecName: Full=Rubredoxin 2; Short=Rd-2; 49 9e-08
RUBR_DESVM RecName: Full=Rubredoxin; Short=Rd; 48 1e-07
RUBR3_RHOSQ RecName: Full=Rubredoxin 3; 44 2e-06
RUBR3_RHOER RecName: Full=Rubredoxin 3; 44 2e-06
RUBR4_RHOSQ RecName: Full=Rubredoxin 4; 42 6e-06
RUBR4_RHOER RecName: Full=Rubredoxin 4; 42 6e-06
RUBR_PEPAS RecName: Full=Rubredoxin; Short=Rd; 40 3e-05
RUBR2_RHOER RecName: Full=Rubredoxin 2; 39 7e-05
RN126_MOUSE RecName: Full=RING finger protein 126; 35 0.001
>HOXQ_RALEH RecName: Full=Hydrogenase expression/formation protein
hoxQ;
Length = 282
Score = 168 bits (426), Expect = 6e-44
Identities = 108/285 (37%), Positives = 157/285 (55%), Gaps = 12/285 (4%)
Query: 3 HSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIR 62
+S IPVV + GPGSQ E+E +++ +P G+++ PVLPE A L A+ +L ++
Sbjct: 2 NSFPIPVV-LLGPGSQAEDETLDYIHMPQGMSVYTPPVLPEPEQIACLTQAQSVLRAILD 60
Query: 63 DMDNPVATLPFPLSYKLNATEQQNSGLLDQLLGEGEISARVLLSDGKEQ-RIQETVFTGV 121
+D P P +L A +++N LL Q+LGEGE+SAR+ +G+ Q IQE VF GV
Sbjct: 61 ALDRADPKQPNP-RIELWALDEENRQLLKQVLGEGEVSARI---EGEYQVYIQEAVFAGV 116
Query: 122 WRVREYNADQQRVADEIIIGPIPESIWQT--HXXXXXXXXXXXXXAGLMNGAFIAHEIAE 179
WRV D D I +G PE + + G+MN I EI +
Sbjct: 117 WRVVSTCPDA--TTDYIEVGAAPEVLRGAARYGANQWSLDVGRVPDGVMNAPSILAEIDD 174
Query: 180 RVKQ--PVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWR 237
++ P K H++NLTLLP++ D +LD LG I SRGYG CRI ST P WR
Sbjct: 175 QLLSWHPGKPVHVVNLTLLPMSPQDITFLDETLGAASVTILSRGYGNCRISSTAVPYCWR 234
Query: 238 VNYFNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWL 282
V YFN +T + + +EI D+P++A A +D+ D++ L L+W+
Sbjct: 235 VVYFNSQDTTILNTVEITDLPEVACAAPEDLRDSHERLTEVLKWV 279
>HYAF_ECOLI RecName: Full=Hydrogenase-1 operon protein hyaF;
Length = 285
Score = 135 bits (339), Expect = 7e-34
Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 15/282 (5%)
Query: 11 NIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHI--LTTLIRDMDNPV 68
++ GPG+QP ++ F+ P LP+T + ++ A L H + L+ ++ + +
Sbjct: 7 HLLGPGTQPNDDSFSMNP------LPITCQVNDEPSMAALEQCAHSPQVIALLNELQHQL 60
Query: 69 ATLPFPLSYKLNATEQQNSG----LLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRV 124
+ PL ++ LLGEGE+S R+ +D E IQE +F G+WRV
Sbjct: 61 SERQPPLGEXXXXXXXXXXXXXRHFINTLLGEGEVSVRIQQADDSESEIQEAIFCGLWRV 120
Query: 125 REYNADQQRVADEIIIGPIPESIWQ--THXXXXXXXXXXXXXAGLMNGAFIAHEIAERVK 182
R ++ + D++ G P ++WQ T GLMNG +AHE+ V+
Sbjct: 121 RRRRGEKL-LEDKLEAGCAPLALWQAATQNLLPTDSLLPPPIDGLMNGLPLAHELLAHVR 179
Query: 183 QPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNYFN 242
P +PH INLT LP+++ADR +L G G I + GYG+ I +T VW + +
Sbjct: 180 NPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIGYGESYINATGLRHVWHLRCTD 239
Query: 243 DMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKE 284
+ L + EI IP++ +A +D+ D+ L +WL E
Sbjct: 240 TLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVCQWLAE 281
>HUPH_RHOCA RecName: Full=Hydrogenase expression/formation protein
hupH;
Length = 275
Score = 123 bits (308), Expect = 3e-30
Identities = 81/274 (29%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 14 GPGSQPE-EEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLP 72
GPGSQPE +E+ ++ +P+G+ + LPE + + A +L + +
Sbjct: 13 GPGSQPEGDEELGYMQLPSGMRT-YSAHLPEVEDSSAVTPALKLLDEIAAGAE--ACARG 69
Query: 73 FPLSYKLNATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNADQQ 132
S+ L + QN L+ + +G+GE++ ++ +QE+VF GVW V D+
Sbjct: 70 GMASFDLAGLDAQNRALIAETMGQGEVAMKI--RGIPALMVQESVFAGVWSVAGAGVDR- 126
Query: 133 RVADEIIIGPIPESIWQT--HXXXXXXXXXXXXXAGLMNGAFIAHEIAERVKQPVK-EPH 189
I +G +P + G++N + E+ ++ V
Sbjct: 127 -----IEVGAVPAAALSRAFEPFRKGQTALPPLSDGVVNAPALIAELFDKSAAYVGGAAD 181
Query: 190 IINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNYFNDMNTLLQ 249
+INLTLLP + D LD+ LGEG I SRGYG CRI +T P VWRV ++N + L+
Sbjct: 182 VINLTLLPHTEEDLTLLDYMLGEGAVTILSRGYGNCRITATATPHVWRVQFYNSTDALIL 241
Query: 250 DMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLK 283
D IE+ +P++A+A +D+ED+ ++ LE ++
Sbjct: 242 DTIEVTTMPEVALAAREDLEDSAGRIREVLEAIR 275
>HOXQ_AZOVI RecName: Full=Hydrogenase expression/formation protein
hoxQ;
Length = 283
Score = 121 bits (303), Expect = 1e-29
Identities = 83/265 (31%), Positives = 123/265 (46%), Gaps = 13/265 (4%)
Query: 14 GPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLPF 73
GPGS EEE + +P + P LPE P +L I
Sbjct: 13 GPGSHGEEERPDCPSMPRAMRRFERPALPE---PGQLS-GHPIXXXXXXXXXXXXXXYRI 68
Query: 74 PLSYKLNATEQQNSG---LLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNAD 130
++ ++Q LL Q+LGEGE++ +V + RIQETV GVW V+
Sbjct: 69 GEQSRVIGLDRQPKADLKLLQQILGEGEVAIQV--GGQRPARIQETVLAGVWWVQLQIGR 126
Query: 131 QQRVADEIIIGPIPESIWQTHXXXXXXXXXXXXXAGLMNGAFIAHEIAERVKQPVKE--- 187
+ V + + +P + + GL+N + E+ + K+ +
Sbjct: 127 GEVVGQWLEVADVPALVRRRAFAETRWPQLGELPDGLLNAGPVLVELLDAAKRHAERALA 186
Query: 188 -PHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNYFNDMNT 246
PH +NL+LLP + DR +L LGEG + SRGYG CRI ST PG+W V YFN +
Sbjct: 187 TPHAVNLSLLPFSPEDRRFLAERLGEGSVTLLSRGYGNCRIASTATPGIWCVQYFNSSDR 246
Query: 247 LLQDMIEIADIPDIAVAGIDDIEDA 271
L+ D +E+ IP +A A +DI+D+
Sbjct: 247 LILDTLEVTGIPQVACAAQEDIDDS 271
>HUPQ_AZOCH RecName: Full=Hydrogenase expression/formation protein
hupQ;
Length = 284
Score = 120 bits (302), Expect = 1e-29
Identities = 85/266 (31%), Positives = 122/266 (45%), Gaps = 14/266 (5%)
Query: 14 GPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLPF 73
GPGS EE+ ++LP+P ++ P LPE P +L + I
Sbjct: 13 GPGSHGEEDRLDYLPMPREMHTFERPSLPE---PEQLD-SHPIXXXXXXXXXXXXXXYRI 68
Query: 74 PLSYKLNATEQQNSG---LLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNAD 130
++ ++Q LL Q+LGEGE++ +V + RIQETV GVW
Sbjct: 69 GEQSRVIGLDRQPKADLKLLQQILGEGEVAIQV--GGQRPVRIQETVLAGVWXXXXXXXX 126
Query: 131 QQRVADEIIIGPIPESIWQ-THXXXXXXXXXXXXXAGLMNGAFIAHEIAERVKQPVKE-- 187
IP + + L+N + E+ E KQ +
Sbjct: 127 XXXXXXXXXXADIPALVRRRAFAEARWPRLGATLPDDLLNAGPVLVELLEAAKQHAEHAS 186
Query: 188 --PHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNYFNDMN 245
PH+INL+LLP + D+ +L LGEG + SRGYG CRI ST PG+WRV YFN +
Sbjct: 187 ATPHVINLSLLPFSAEDQRFLAEQLGEGPVTVLSRGYGNCRIASTATPGIWRVQYFNSTD 246
Query: 246 TLLQDMIEIADIPDIAVAGIDDIEDA 271
L+ D +E+ IP A A +DI+D+
Sbjct: 247 RLILDTLEVTAIPQAACAAQEDIDDS 272
>HUPH_RHILV RecName: Full=Hydrogenase expression/formation protein
hupH;
Length = 282
Score = 108 bits (269), Expect = 9e-26
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 112 RIQETVFTGVWRVREYNADQQRVADEIIIGPIPESIWQTHXXXXXXXXXXXXXAGLMNGA 171
++QE V GVWR+R + D + +AD I + IP ++ Q AG MN
Sbjct: 108 QMQEAVMAGVWRIRFTDVDGRLIADYIEVASIPAAVRQACSGLPASISHGPAPAGAMNVM 167
Query: 172 FIAHEIAERVKQ--PVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVS 229
+ EI +R+ + H+I +L P++ D +L LG G + SRGYG CR+V+
Sbjct: 168 PVLTEIGDRIARYRDGDPAHVITFSLFPMSPEDMAFLQDALGAGPVQLTSRGYGTCRVVA 227
Query: 230 THFPGVWRVNYFNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLE 280
T VW V ++N M+T++ D +E+ +IP +A+A +D D+ A L++ E
Sbjct: 228 TGARNVWSVQFYNAMDTIILDTLEVCNIPSVAIAAEEDFRDSEARLRDIWE 278
>HUPH_BRAJA RecName: Full=Hydrogenase expression/formation protein
hupH;
Length = 287
Score = 101 bits (252), Expect = 9e-24
Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 107 DGKEQRIQETVFTGVWRVR-EYNADQQRVADEIIIGPIPESIWQTHXXXXXXXXXXXXXA 165
DG +IQE+V G+WRVR E +A+ + + IG +PE + +
Sbjct: 110 DGSLAQIQESVLAGIWRVRLETDANHEYLE----IGAVPEIVKRAAADLTSADFEIGQVP 165
Query: 166 -GLMNGAFIAHEIAERVK--QPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGY 222
G MN + EI ER +P IIN TLLP++ D +L + G + SRGY
Sbjct: 166 EGAMNVLPVLAEIRERALAWRPGIRSQIINFTLLPMSPVDMSFLQDTIRNGPIQLVSRGY 225
Query: 223 GKCRIVSTHFPGVWRVNYFNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLE 280
G CR++ST VW V +FN M+T++ D +E+ +P +A+A +D ED+ LK +E
Sbjct: 226 GTCRVLSTGIRNVWSVQFFNAMDTIILDTLEVGGVPTVALAADEDFEDSAERLKEIIE 283
>RUBR_AZOVI RecName: Full=Rubredoxin; Short=Rd;
Length = 72
Score = 79.0 bits (193), Expect = 6e-17
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
+ECK+CW YDPA GD VWQIPPG PF+ LP +W CP C+ + FMV+D
Sbjct: 22 LECKICWQRYDPAEGDPVWQIPPGTPFAALPAHWRCPRCDGDREQFMVVD 71
>RUBL_RHILV RecName: Full=Probable rubredoxin hupI;
Length = 70
Score = 78.6 bits (192), Expect = 8e-17
Identities = 32/53 (60%), Positives = 38/53 (71%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDEG 347
RMEC +CW VYDPA GD VWQIPPG PFS L + W CP C+ +S FM + +G
Sbjct: 17 RMECGICWHVYDPAEGDPVWQIPPGTPFSNLTEDWRCPNCDALQSKFMRLGDG 69
>RUBR_RALEH RecName: Full=Rubredoxin; Short=Rd;
Length = 78
Score = 77.0 bits (188), Expect = 2e-16
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
R+ECK+CWW YDP +GD VWQI PG FS LP +W CP C+ FMV+
Sbjct: 25 RLECKICWWEYDPEVGDPVWQIAPGTSFSALPAHWRCPNCDGEAEQFMVL 74
>RUBL_BRAJA RecName: Full=Probable rubredoxin hupI;
Length = 69
Score = 76.6 bits (187), Expect = 3e-16
Identities = 32/53 (60%), Positives = 38/53 (71%)
Query: 293 VVRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
V R+EC +CW VYDPA GDDV QI PG PF+ LP+ W CP C+ KS FM I+
Sbjct: 16 VTRLECGICWTVYDPADGDDVAQIAPGTPFAALPEEWHCPNCDAPKSKFMAIE 68
>RUBR_AZOCH RecName: Full=Rubredoxin in uptake hydrogenase operon;
Length = 72
Score = 75.9 bits (185), Expect = 5e-16
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDE 346
+ECK+CW YDPA+GD+VWQI G PF+ LP +W CP C+ + FMV+D+
Sbjct: 22 LECKICWHRYDPAVGDEVWQILAGTPFAALPAHWRCPQCDGDREQFMVVDD 72
>HUPJ_RHOCA RecName: Full=Probable rubredoxin hupJ;
Length = 278
Score = 67.0 bits (162), Expect = 2e-13
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMV 343
MECK+CW YDPA GD+ Q+ PG PF+ LP+ W CP C+ K+ F+V
Sbjct: 26 MECKICWTPYDPASGDEFRQVLPGTPFTALPEDWHCPNCDAPKAQFIV 73
>RUBR1_METJA RecName: Full=Probable rubredoxin 1; Short=RD
1;
Length = 80
Score = 65.9 bits (159), Expect = 5e-13
Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVC--ETSKSGFMVIDE 346
+ +CKVC WVYDP GD IPP PF +LPD W CPVC + K F +DE
Sbjct: 21 KYKCKVCGWVYDPLKGDPSQNIPPKTPFEELPDTWICPVCRGKVGKESFEPLDE 74
>NORV_SALPA RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 62.8 bits (151), Expect = 4e-12
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
+M+C VC W+YDPALG+ + + PG P+S++PD + CP C K F V+
Sbjct: 425 KMQCSVCQWIYDPALGEPLQDVAPGTPWSEVPDNFLCPECSLGKDVFDVL 474
>NORV_SALTI RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 62.0 bits (149), Expect = 8e-12
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
+M+C VC W+YDPALG+ + + PG P+S +PD + CP C K F V+
Sbjct: 425 KMQCSVCQWIYDPALGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVL 474
>NORV_SALPB RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 62.0 bits (149), Expect = 8e-12
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
+M+C VC W+YDPALG+ + + PG P+S +PD + CP C K F V+
Sbjct: 425 KMQCSVCQWIYDPALGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVL 474
>NORV_SALAR RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 62.0 bits (149), Expect = 8e-12
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
+M+C VC W+YDPALG+ + + PG P+S +PD + CP C K F V+
Sbjct: 425 KMQCSVCQWIYDPALGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVL 474
>NORV_ENT38 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 482
Score = 61.6 bits (148), Expect = 1e-11
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
M+C VC WVYDPALG+ + + PG P+S +PD + CP C K F V+
Sbjct: 429 MQCSVCQWVYDPALGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVL 477
>NORV_SHISS RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 61.2 bits (147), Expect = 1e-11
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 277 NTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCET 336
NT+ + T+++ RM+C VC W+YDPA G+ + + PG P+S++PD + CP C
Sbjct: 407 NTVVKEETSATTKSDLGPRMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSL 466
Query: 337 SKSGF 341
K F
Sbjct: 467 GKDVF 471
>NORV_ECOHS RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 61.2 bits (147), Expect = 1e-11
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 277 NTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCET 336
NT+ + T+++ RM+C VC W+YDPA G+ + + PG P+S++PD + CP C
Sbjct: 407 NTVVKEETSATTKSDLGPRMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSL 466
Query: 337 SKSGF 341
K F
Sbjct: 467 GKDVF 471
>NORV_SALTY RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.8 bits (146), Expect = 2e-11
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
+M+C VC W+YDPALG+ + + PG P++ +PD + CP C K F V+
Sbjct: 425 KMQCSVCQWIYDPALGEPLQDVAPGTPWNDVPDNFLCPECSLGKDVFDVL 474
>NORV_SHIFL RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_SHIF8 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_SHIDS RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_SHIBS RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECOUT RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECOSM RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECOLI RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECOLC RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECOL6 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECOL5 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECOK1 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECODH RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_ECO57 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin homolog; Short=FlRd homolog;
Short=FlavoRb homolog;
Length = 411
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 357 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 403
>NORV_ECO24 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 60.5 bits (145), Expect = 2e-11
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPA G+ + + PG P+S++PD + CP C K F
Sbjct: 425 RMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVF 471
>NORV_SALCH RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 479
Score = 59.7 bits (143), Expect = 4e-11
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
+M+C VC W+YDPA G+ + + PG P+S +PD + CP C K F V+
Sbjct: 425 KMQCSVCQWIYDPAQGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVL 474
>NORV_CITK8 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 482
Score = 58.9 bits (141), Expect = 6e-11
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
M+C VC W+YDPA G+ + + PG P+S +PD + CP C K F V+
Sbjct: 429 MQCSVCQWIYDPAKGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVL 477
>NORV_KLEP7 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 482
Score = 58.5 bits (140), Expect = 8e-11
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
M+C VC WVYDPA G+ + PG P+S++PD + CP C K F V+
Sbjct: 429 MQCSVCQWVYDPAKGEPNQDVQPGTPWSEVPDNFLCPECSLGKDVFDVL 477
>RUBR_CLOTS RecName: Full=Rubredoxin; Short=Rd;
Length = 52
Score = 57.8 bits (138), Expect = 1e-10
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
+ +C VC ++YDP +GD IPPG F LPD W CP C K F
Sbjct: 3 KWQCTVCGYIYDPEVGDPTQNIPPGTKFEDLPDDWVCPDCGVGKDQF 49
>RUBR_ANASP RecName: Full=Rubredoxin; Short=Rd;
Length = 111
Score = 57.8 bits (138), Expect = 1e-10
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 289 ENEPVVRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
EN + R EC+ C +VY+P GD+ I P PF++LP W CPVC K+ F
Sbjct: 7 ENTVLDRFECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAF 59
>RUBR_METTH RecName: Full=Probable rubredoxin; Short=RD;
Length = 63
Score = 57.4 bits (137), Expect = 2e-10
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 288 TENEPVVRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
+E + R +C+VC ++YDP G+ PPG PF LP+ W CP C K F +D
Sbjct: 6 SEVSAMKRYKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMFKPLD 63
>RUBR_ANAVT RecName: Full=Rubredoxin; Short=Rd;
Length = 111
Score = 57.4 bits (137), Expect = 2e-10
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 289 ENEPVVRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
EN + R EC+ C +VY+P GD I P PF++LP W CPVC K+ F
Sbjct: 7 ENTVLDRFECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAF 59
>NORV_ERWCT RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 509
Score = 57.0 bits (136), Expect = 2e-10
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 286 PVTENEPVVR-----MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSG 340
P + +P V+ M+C VC W+YDPALG+ + + PG +S +PD + CP C K
Sbjct: 445 PQSATQPTVQSESGCMQCSVCQWIYDPALGEPMQDVTPGTMWSDVPDSFLCPECGLGKDV 504
Query: 341 F 341
F
Sbjct: 505 F 505
>NORV_SERP5 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 485
Score = 56.6 bits (135), Expect = 3e-10
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
RM+C VC W+YDPALG+ + + PG + ++PD + CP C K F
Sbjct: 431 RMQCSVCLWIYDPALGEPMQDVAPGTCWQEVPDDFLCPECAMGKEVF 477
>HRB_MOOTA RecName: Full=High molecular weight rubredoxin;AltName:
Full=Nitric oxide reductase NADH:FprA oxidoreductase;
Length = 229
Score = 56.6 bits (135), Expect = 3e-10
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
+ +C +C +VYDP GD I PG PF+ LP+ W CP+C K F
Sbjct: 180 KYQCTICNYVYDPVQGDPEHGIAPGTPFADLPEDWTCPICGAGKDAF 226
>NORV_PECCP RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 503
Score = 55.8 bits (133), Expect = 5e-10
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
M+C VC W+YDPALG+ + + PG +S +PD + CP C K F
Sbjct: 454 MQCSVCQWIYDPALGEPMQDVTPGTMWSDVPDSFLCPECGLGKDVF 499
>RUBR_DESGI RecName: Full=Rubredoxin; Short=Rd;
Length = 52
Score = 55.5 bits (132), Expect = 7e-10
Identities = 24/44 (54%), Positives = 25/44 (56%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C VC + YDPA GD I PG F LPD W CPVC SK F
Sbjct: 6 CTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAF 49
>RUBR2_CLOPE RecName: Full=Rubredoxin 2; Short=Rd 2;
Length = 53
Score = 54.7 bits (130), Expect = 1e-09
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C VC ++YDPA+GD + PG F +PD W CP+C KS F
Sbjct: 6 CDVCGYIYDPAVGDPDNGVEPGTEFKDIPDDWVCPLCGVDKSQF 49
>RUBR1_CHLTE RecName: Full=Rubredoxin 1; Short=Rd 1;
Length = 69
Score = 54.3 bits (129), Expect = 2e-09
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 287 VTENEPV-----VRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
V E+EP C C ++YDPA G+ I PG+PF +LPD W CPVC K+ F
Sbjct: 3 VKESEPAQADLQASWMCAECGYIYDPAEGNLETNIRPGMPFDKLPDDWSCPVCNHPKNQF 62
>RUBR2_CHLTE RecName: Full=Rubredoxin 2; Short=Rd 2;
Length = 52
Score = 53.9 bits (128), Expect = 2e-09
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 297 ECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
+C +C ++Y+P GD IP G F LPD W CPVC K F I
Sbjct: 5 KCNICGYIYNPETGDPEGDIPAGTSFESLPDSWMCPVCGAGKEEFTKI 52
>RUBR1_CLOPE RecName: Full=Rubredoxin 1; Short=Rd 1;
Length = 53
Score = 53.9 bits (128), Expect = 2e-09
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
C VC ++YDP +GD + PG F +PD W CP+C+ K+ F ++
Sbjct: 6 CDVCGYIYDPVVGDPDNGVAPGTKFKDIPDTWVCPLCKLDKTHFSKVE 53
>RUBR_TREPA RecName: Full=Rubredoxin; Short=Rd;
Length = 52
Score = 53.5 bits (127), Expect = 3e-09
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
C +C W Y+P +GD IP G F LPD+W CP+C K+ F+ +
Sbjct: 6 CDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSFVKV 52
>RUBR_PYRFU RecName: Full=Rubredoxin; Short=Rd;
Length = 54
Score = 53.5 bits (127), Expect = 3e-09
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDE 346
CK+C ++YD GD I PG F +LPD W CP+C KS F +++
Sbjct: 6 CKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLED 54
>RUBR2_PSEOL RecName: Full=Rubredoxin 2;AltName: Full=Two-iron
rubredoxin;
Length = 173
Score = 53.5 bits (127), Expect = 3e-09
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDE 346
C C +YD ALGD+ PG F +PD WCCP C +K +++ +E
Sbjct: 124 CITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATKEDYVLYEE 172
Score = 45.1 bits (105), Expect = 1e-06
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 297 ECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCET-SKSGFMVIDEG 347
+C C +VYD + G+ PG P+ +P+ WCCP C K FM+I+ G
Sbjct: 5 KCPDCNYVYDESAGNVHEGFSPGTPWHLIPEDWCCPDCAVRDKLDFMLIESG 56
>NORV_AERS4 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 521
Score = 53.5 bits (127), Expect = 3e-09
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
M C VC W+YDPALG+ + PG P++++PD + CP C K F
Sbjct: 467 MLCTVCQWIYDPALGEPDQLVAPGTPWARVPDSFLCPGCGIGKEVF 512
>RUBR_BUTME RecName: Full=Rubredoxin; Short=Rd;
Length = 53
Score = 53.1 bits (126), Expect = 4e-09
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C +C +VYDPA+GD + PG F+ LP+ W CP C SK F
Sbjct: 6 CDICGYVYDPAVGDPDNGVAPGTAFADLPEDWVCPECGVSKDEF 49
>NORV_AERHH RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 495
Score = 53.1 bits (126), Expect = 4e-09
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
M C VC WVYDPA G+ + PG P++Q+PD + CP C K F
Sbjct: 441 MLCTVCQWVYDPAQGEPDQLVAPGTPWAQVPDSFLCPGCGIGKEVF 486
>RUBR_HELMO RecName: Full=Rubredoxin; Short=Rd;
Length = 52
Score = 52.4 bits (124), Expect = 6e-09
Identities = 23/44 (52%), Positives = 25/44 (56%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C VC +VYDPA GD I PG F LP W CP+C SK F
Sbjct: 6 CLVCGYVYDPAKGDPDHGIAPGTAFEDLPADWVCPLCGVSKDEF 49
>RUBR1_DESDA RecName: Full=Rubredoxin 1; Short=Rd-1;
Length = 45
Score = 52.4 bits (124), Expect = 6e-09
Identities = 24/44 (54%), Positives = 26/44 (59%), Gaps = 7/44 (15%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C VC + YDPA D+V PF QLPD WCCPVC SK F
Sbjct: 6 CNVCGYEYDPAEHDNV-------PFDQLPDDWCCPVCGVSKDQF 42
>RUBR_PYRAB RecName: Full=Rubredoxin; Short=Rd;
Length = 53
Score = 51.6 bits (122), Expect = 1e-08
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 293 VVRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
+ + CK+C ++YD GD I PG F LPD W CP+C KS F I+
Sbjct: 1 MAKWRCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEFERIE 53
>RUBR_SYNY3 RecName: Full=Rubredoxin; Short=Rd;
Length = 115
Score = 51.2 bits (121), Expect = 1e-08
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 297 ECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDE 346
EC+ C +VY P+ GD + PG PF LP W CPVC ++ F+ E
Sbjct: 19 ECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNYFISTGE 68
>RUBR_CLOAB RecName: Full=Rubredoxin; Short=Rd;
Length = 54
Score = 51.2 bits (121), Expect = 1e-08
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDE 346
C VC ++YDPA GD + PG F +PD W CP+C K F +E
Sbjct: 6 CVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEPSEE 54
>RUBR_CLOST RecName: Full=Rubredoxin; Short=Rd;
Length = 53
Score = 50.8 bits (120), Expect = 2e-08
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C VC +VYDP +GD I PG F +P+ W CP+C K F
Sbjct: 6 CTVCGYVYDPEVGDPDNNINPGTSFQDIPEDWVCPLCGVGKDQF 49
>NORV_VIBVY RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 494
Score = 50.8 bits (120), Expect = 2e-08
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 284 EYPVTENEPVVR---------MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVC 334
+ P+TE P M C VC WVYDPA G+ I G ++ +PDY+ CP C
Sbjct: 423 QQPLTETTPTADAAHSADCQCMVCTVCNWVYDPAKGEPNQGIEVGTTWADVPDYFLCPEC 482
Query: 335 ETSKSGFM 342
K F+
Sbjct: 483 HLGKDVFV 490
>NORV_VIBVU RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 494
Score = 50.8 bits (120), Expect = 2e-08
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 284 EYPVTENEPVVR---------MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVC 334
+ P+TE P M C VC WVYDPA G+ I G ++ +PDY+ CP C
Sbjct: 423 QQPLTETTPTADAAHSADCQCMVCTVCNWVYDPAKGEPNQGIEVGTTWADVPDYFLCPEC 482
Query: 335 ETSKSGFM 342
K F+
Sbjct: 483 HLGKDVFV 490
>RUBR_CHLLT RecName: Full=Rubredoxin; Short=Rd;
Length = 53
Score = 50.4 bits (119), Expect = 2e-08
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C VC +VYDPA G+ I PG F LP+ W CPVC K F
Sbjct: 6 CSVCGYVYDPADGEPDDPIDPGTGFEDLPEDWVCPVCGVDKDLF 49
>RUBR2_METJA RecName: Full=Probable rubredoxin 2; Short=RD
2;
Length = 55
Score = 50.4 bits (119), Expect = 2e-08
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 293 VVRMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
+ R +C +C WVYD G+ IPPG F LPD + CP C K+ F ID
Sbjct: 4 MARYQC-MCGWVYDEDKGEPSQNIPPGTKFEDLPDTFRCPQCGLGKNAFRKID 55
>RUBR_DESVH RecName: Full=Rubredoxin; Short=Rd;
Length = 52
Score = 49.7 bits (117), Expect = 4e-08
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C VC + YDPA GD + PG F LP W CPVC KS F
Sbjct: 6 CTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEF 49
>RUBR_MEGEL RecName: Full=Rubredoxin; Short=Rd;
Length = 52
Score = 49.3 bits (116), Expect = 5e-08
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
+ EC +C ++YD A GDD + G F+ LP W CP C K F+ +D
Sbjct: 3 KYECSICGYIYDEAEGDD-GNVAAGTKFADLPADWVCPTCGADKDAFVKMD 52
>RUBR_CLOPA RecName: Full=Rubredoxin; Short=Rd;
Length = 54
Score = 49.3 bits (116), Expect = 5e-08
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDE 346
C VC ++Y+P GD + PG F +PD W CP+C K F ++E
Sbjct: 6 CTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEE 54
>NORV_VIBF1 RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 496
Score = 49.3 bits (116), Expect = 5e-08
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
M C VC WVYDP +G+ + P P+S +P+ + CP C K F+ I
Sbjct: 447 MLCSVCNWVYDPEIGEPNQGVEPNTPWSSVPNDFLCPECHLGKDVFVEI 495
>RUBR_ACIAD RecName: Full=Rubredoxin; Short=Rd;
Length = 54
Score = 48.9 bits (115), Expect = 7e-08
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
+ +C VC W+YD A G I PG + +PD W CP C SK F +I+
Sbjct: 3 KYQCIVCGWIYDEAEGWPQDGIAPGTKWEDIPDDWTCPDCGVSKVDFEMIE 53
>RUBR3_CHLTE RecName: Full=Rubredoxin 3; Short=Rd 3;
Length = 53
Score = 48.9 bits (115), Expect = 7e-08
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C C + YDPA GD I PG F LP+ W CPVC KS F
Sbjct: 6 CVPCGYEYDPADGDPENGIEPGTAFEDLPEDWVCPVCGVDKSFF 49
>NORV_ALISL RecName: Full=Anaerobic nitric oxide reductase
flavorubredoxin; Short=FlRd;
Short=FlavoRb;
Length = 499
Score = 48.9 bits (115), Expect = 7e-08
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 296 MECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVI 344
M C VC WVYDP +G+ + P + +PDY+ CP C K F+ +
Sbjct: 450 MLCTVCNWVYDPEIGEPNQGVEPNTAWIDVPDYFLCPECNLGKDVFVEV 498
>RUBR2_DESDA RecName: Full=Rubredoxin 2; Short=Rd-2;
Length = 62
Score = 48.5 bits (114), Expect = 9e-08
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 291 EPVVRMECKV--CWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
EP C++ C +VYDP GD ++P G F LP+ W CPVC K F
Sbjct: 3 EPQDMWRCQMVNCGYVYDPDRGDKRRKVPAGTKFEDLPEDWRCPVCGAGKKSF 55
>RUBR_DESVM RecName: Full=Rubredoxin; Short=Rd;
Length = 52
Score = 48.1 bits (113), Expect = 1e-07
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGF 341
C VC + YDPA GD + PG F +P W CP+C KS F
Sbjct: 6 CTVCGYEYDPAEGDPDNGVKPGTAFEDVPADWVCPICGAPKSEF 49
>RUBR3_RHOSQ RecName: Full=Rubredoxin 3;
Length = 61
Score = 43.9 bits (102), Expect = 2e-06
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVC 334
C VC +VYD + G P G P+ +PD WCCP C
Sbjct: 6 CPVCEYVYDESKGAPREGFPAGTPWDAVPDDWCCPDC 42
>RUBR3_RHOER RecName: Full=Rubredoxin 3;
Length = 61
Score = 43.9 bits (102), Expect = 2e-06
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVC 334
C VC +VYD + G P G P+ +PD WCCP C
Sbjct: 6 CPVCEYVYDESKGAPREGFPAGTPWDAVPDDWCCPDC 42
>RUBR4_RHOSQ RecName: Full=Rubredoxin 4;
Length = 60
Score = 42.4 bits (98), Expect = 6e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 297 ECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
+C C + YD A+G I PG + +P+ W CP C +KS F +++
Sbjct: 8 QCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVE 56
>RUBR4_RHOER RecName: Full=Rubredoxin 4;
Length = 60
Score = 42.4 bits (98), Expect = 6e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 297 ECKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
+C C + YD A+G I PG + +P+ W CP C +KS F +++
Sbjct: 8 QCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVE 56
>RUBR_PEPAS RecName: Full=Rubredoxin; Short=Rd;
Length = 53
Score = 40.0 bits (92), Expect = 3e-05
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 11/57 (19%)
Query: 295 RMECKVCWWVYDPALGDDVWQIPPGVP-----FSQLPDYWCCPVCETSKSGFMVIDE 346
+ EC +C ++YDPAL + P P F + + W CP+C K F V ++
Sbjct: 3 KFECTLCGYIYDPAL------VGPDTPDQDGAFEDVSENWVCPLCGAGKEDFEVYED 53
>RUBR2_RHOER RecName: Full=Rubredoxin 2;
Length = 63
Score = 38.9 bits (89), Expect = 7e-05
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 298 CKVCWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVID 345
C C + YD A+G I PG + ++P+ W CP C +K F +++
Sbjct: 13 CLQCGFEYDEAIGWPDDGIEPGTRWDEIPEDWSCPDCGAAKVDFEMVE 60
>RN126_MOUSE RecName: Full=RING finger protein 126;
Length = 313
Score = 35.0 bits (79), Expect = 0.001
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 276 KNTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGVPFSQ------LPDYW 329
K ++ L PVTE +EC VC D ALG+ V Q+P F L +
Sbjct: 209 KEKIQALPTVPVTEEHVGSGLECPVC--KEDYALGESVRQLPCNHLFHDSCIVPWLEQHD 266
Query: 330 CCPVCETSKSG 340
CPVC S +G
Sbjct: 267 SCPVCRKSLTG 277
Database: sws57.9x
Posted date: Nov 5, 2009 10:46 AM
Number of letters in database: 179,409,320
Number of sequences in database: 510,076
Lambda K H
0.325 0.134 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 510076
Number of Hits to DB: 8,630,253,988
Number of extensions: 345184298
Number of successful extensions: 828589
Number of sequences better than 1.0e-03: 14101
Number of HSP's gapped: 812822
Number of HSP's successfully gapped: 15743
Length of database: 100,000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.2 bits)