BLASTP 2.2.16 [Mar-25-2007]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ACF55177.1 spne4 ACF55177.1 GIB00761CH01 "choline-binding
protein F, point mutation"
(141 letters)
Database: sws57.9x
510,076 sequences; 179,409,320 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TOXA_CLODI RecName: Full=Toxin A; 49 2e-08
ALYS_BPHB3 RecName: Full=Lytic amidase; EC=3.5.1.28;AltN... 37 8e-05
ALYS_STRPN RecName: Full=Autolysin; EC=3.5.1.28;AltName:... 36 2e-04
LYS_BPCP9 RecName: Full=Lysozyme; EC=3.2.1.17;AltName: F... 35 5e-04
LYS_BPCP1 RecName: Full=Lysozyme; EC=3.2.1.17;AltName: F... 35 5e-04
GTFS_STRDO RecName: Full=Glucosyltransferase-S; Short=GT... 34 7e-04
>TOXA_CLODI RecName: Full=Toxin A;
Length = 2710
Score = 49.3 bits (116), Expect = 2e-08
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 16 FFGLLGTSTVFADDSE---GWQFVQENGRTYYKKGDLKE--TYWRVIDGKYYYFDPLSGE 70
F L G F +DS+ GWQ + +G+ YY + E T W+ IDGK YYF+ + E
Sbjct: 2308 FLTLNGKKYYFDNDSKAVTGWQTI--DGKKYYFNLNTAEAATGWQTIDGKKYYFNLNTAE 2365
Query: 71 MVVGWQYIPAP--HKGVTIGPSPRIEISLRPDWFYFGQDGVLQ--EFVGKQVLEAKTATN 126
GWQ I + + S+ FYF DG++Q F G E N
Sbjct: 2366 AATGWQTIDGKKYYFNTNTFIASTGYTSINGKHFYFNTDGIMQIGVFKGPNGFEYFAPAN 2425
Query: 127 TNKHHGE 133
T+ ++ E
Sbjct: 2426 TDANNIE 2432
Score = 44.3 bits (103), Expect = 7e-07
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 34 QFVQENGRTYYKKGDLKE-TYWRVIDGKYYYFDPLSGEMVVGWQYIPAP----HKGVTIG 88
+F+ NG+ YY D K T R IDGK YYF+ + V GWQ I + +I
Sbjct: 2441 KFLTLNGKKYYFGSDSKAVTGLRTIDGKKYYFNTNTAVAVTGWQTINGKKYYFNTNTSIA 2500
Query: 89 PSPRIEISLRPDWFYFGQDGVLQ--EFVGKQVLEAKTATNTNKHHGE 133
+ IS + FYF DG++Q F G E NT+ ++ E
Sbjct: 2501 STGYTIISGK--HFYFNTDGIMQIGVFKGPDGFEYFAPANTDANNIE 2545
Score = 43.1 bits (100), Expect = 1e-06
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 34 QFVQENGRTYYKKGDLKE-TYWRVIDGKYYYFDPLSGEMVVGWQYI 78
+F+ NG+ YY D K T W+ IDGK YYF+ + E GWQ I
Sbjct: 2307 KFLTLNGKKYYFDNDSKAVTGWQTIDGKKYYFNLNTAEAATGWQTI 2352
Score = 42.0 bits (97), Expect = 3e-06
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 16 FFGLLGTSTVFADDSEGWQFVQE-NGRTYYKKGDLKE--TYWRVIDGKYYYFDPLSGEMV 72
F L G F ++S+ +Q + + YY + E T W+ IDGK YYF+ + E
Sbjct: 2060 FLTLNGKKYYFDNNSKAVTGLQTIDSKKYYFNTNTAEAATGWQTIDGKKYYFNTNTAEAA 2119
Query: 73 VGWQYIPAPHKGVTIGPSPRIEIS----LRPDWFYFGQDGVLQ--EFVGKQVLEAKTATN 126
GWQ I K + I + + FYF DG++Q F G E N
Sbjct: 2120 TGWQTIDG--KKYYFNTNTAIASTGYTIINGKHFYFNTDGIMQIGVFKGPNGFEYFAPAN 2177
Query: 127 TNKHHGE 133
T+ ++ E
Sbjct: 2178 TDANNIE 2184
Score = 39.7 bits (91), Expect = 2e-05
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 30/117 (25%)
Query: 34 QFVQENGRTYYKKGDLKE-TYWRVIDGKYYYFDPLSGEMVVGWQYIPAPHKGVTIGPSPR 92
+F+ NG+ YY D K T WR+I+ K YYF+P + I A H
Sbjct: 2193 EFLTLNGKKYYFGSDSKAVTGWRIINNKKYYFNPNNA--------IAAIHL--------- 2235
Query: 93 IEISLRPDWFYFGQDGVLQ---------EFVGKQVLEAKTATNTNK-HHGEEYDSPA 139
++ D +YF DG+LQ F E+K T K +G EY +PA
Sbjct: 2236 --CTINNDKYYFSYDGILQNGYITIERNNFYFDANNESKMVTGVFKGPNGFEYFAPA 2290
Score = 39.3 bits (90), Expect = 2e-05
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 39 NGRTYYKKGDLKETYWRV-IDGKYYYFDPLSGEMVVGWQYIPAP--HKGVTIGPSPRIEI 95
+ +TYY D K + I+ +YFDP+ +V GWQ I + + G +
Sbjct: 1817 DNKTYYYDEDSKLVKGLININNSLFYFDPIEFNLVTGWQTINGKKYYFDINTGAALTSYK 1876
Query: 96 SLRPDWFYFGQDGVLQ--EFVGKQVLEAKTATNTNKHHGE 133
+ FYF DGV+Q F G E NT ++ E
Sbjct: 1877 IINGKHFYFNNDGVMQLGVFKGPDGFEYFAPANTQNNNIE 1916
Score = 35.8 bits (81), Expect = 2e-04
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 34 QFVQENGRTYYKKGDLKE-TYWRVIDGKYYYFDPLSGEMVVGWQYI 78
+F+ NG+ YY + K T WR+I+ + YYF+P + VG Q I
Sbjct: 1925 KFLTLNGKKYYFDNNSKAVTGWRIINNEKYYFNPNNAIAAVGLQVI 1970
>ALYS_BPHB3 RecName: Full=Lytic amidase;
EC=3.5.1.28;AltName: Full=N-acetylmuramoyl-L-alanine
amidase;
Length = 318
Score = 37.4 bits (85), Expect = 8e-05
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 23/81 (28%)
Query: 34 QFVQENGRTYYKKGD---LKETYWRVIDGKYYYFDPLSGEMVVGWQYIPAPHKGVTIGPS 90
+F + NG YY G L + + + DG +YYFD SGEM GW+
Sbjct: 198 KFEKINGTWYYFDGSGYMLSDRWKKHTDGNWYYFDQ-SGEMATGWK-------------- 242
Query: 91 PRIEISLRPDWFYFGQDGVLQ 111
+ W+YF +G ++
Sbjct: 243 -----KIADKWYYFDVEGAMK 258
Score = 34.3 bits (77), Expect = 7e-04
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 30 SEGWQFVQENGRTYYKKGDLKETYWRVIDGKYYYFDPLSGEMVVG-------WQYIPAPH 82
S+ W+ + Y+ + T W+ I K+YYFD + G M G W Y+ A
Sbjct: 217 SDRWKKHTDGNWYYFDQSGEMATGWKKIADKWYYFD-VEGAMKTGWVKYKDTWYYLDA-- 273
Query: 83 KGVTIGPSPRIEISLRPDWFYFGQDGVLQE 112
K + + I+ + W+Y DG L +
Sbjct: 274 KEGAMVSNAFIQSADGTGWYYLKPDGTLAD 303
>ALYS_STRPN RecName: Full=Autolysin; EC=3.5.1.28;AltName:
Full=N-acetylmuramoyl-L-alanine amidase;AltName:
Full=Murein hydrolase;
Length = 318
Score = 35.8 bits (81), Expect = 2e-04
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 23/81 (28%)
Query: 34 QFVQENGRTYY--KKGDLKETYWRV-IDGKYYYFDPLSGEMVVGWQYIPAPHKGVTIGPS 90
+F + NG YY G + WR DG +Y+FD SGEM GW+
Sbjct: 198 KFEKINGTWYYFDSSGYMLADRWRKHTDGNWYWFDN-SGEMATGWK-------------- 242
Query: 91 PRIEISLRPDWFYFGQDGVLQ 111
+ W+YF ++G ++
Sbjct: 243 -----KIADKWYYFNEEGAMK 258
>LYS_BPCP9 RecName: Full=Lysozyme; EC=3.2.1.17;AltName:
Full=Endolysin;AltName: Full=Muramidase;AltName:
Full=CP-9 lysin;
Length = 339
Score = 34.7 bits (78), Expect = 5e-04
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 22 TSTVFADDSEGWQFVQENGRTYYKKGDLKETYWRVIDGKYYYFD 65
T+ + DS+GW F + NG Y K W I G +YYFD
Sbjct: 198 TAGTWKQDSKGWWFRRNNGSFPYNK-------WEKIGGVWYYFD 234
>LYS_BPCP1 RecName: Full=Lysozyme; EC=3.2.1.17;AltName:
Full=Endolysin;AltName: Full=Muramidase;AltName:
Full=CP-1 lysin;
Length = 339
Score = 34.7 bits (78), Expect = 5e-04
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 22 TSTVFADDSEGWQFVQENGRTYYKKGDLKETYWRVIDGKYYYFD 65
T+ + DS+GW F + NG Y K W I G +YYFD
Sbjct: 198 TAGTWKQDSKGWWFRRNNGSFPYNK-------WEKIGGVWYYFD 234
>GTFS_STRDO RecName: Full=Glucosyltransferase-S;
Short=GTF-S; EC=2.4.1.5;AltName:
Full=Dextransucrase;AltName: Full=Sucrose
6-glucosyltransferase;
Length = 1365
Score = 34.3 bits (77), Expect = 7e-04
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 39 NGRTYY--KKGDLKETYWRVIDGKYYYFDPLSGE 70
+G+TYY G + Y VIDGK YYFD +GE
Sbjct: 154 DGKTYYVDANGQRLKNYSMVIDGKTYYFDGQTGE 187
Database: sws57.9x
Posted date: Nov 5, 2009 10:46 AM
Number of letters in database: 179,409,320
Number of sequences in database: 510,076
Lambda K H
0.327 0.141 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 510076
Number of Hits to DB: 8,791,160,474
Number of extensions: 358060866
Number of successful extensions: 1013711
Number of sequences better than 1.0e-03: 28073
Number of HSP's gapped: 970166
Number of HSP's successfully gapped: 36182
Length of database: 100,000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)