RPS-BLAST 2.2.16 [Mar-25-2007]

Database: Pfam-A 
           11,912 sequences; 2,039,872 total letters

Searching..................................................done

Query= AAZ56165.1 tfus0 AAZ56165.1 GIB00263CH01 "carbonic anhydrase,
putative"
         (167 letters)



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PF00484 Pro_CA "Carbonic anhydrase"                                    62   8e-13

>PF00484 Pro_CA "Carbonic anhydrase"
          Length = 149

 Score = 61.6 bits (149), Expect = 8e-13
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 18/147 (12%)

Query: 34  LVTCMDSRIEPLEMLGLKPGDAKILRNAGARV--TDDT-LRTLVLAVYLLGVNRVIVLPH 90
           ++ C DSR+ P  + GL PGD  ++RNAG  V  TDD+ L +L  AV +LGV  +IV  H
Sbjct: 3   VIGCSDSRVPPELIFGLGPGDLFVVRNAGNLVPPTDDSVLASLEYAVDVLGVKHIIVCGH 62

Query: 91  TGC--KMASVSG-------DEEVHDTIAARYGVDTRSLEFHTDSDQIGA-LHRDVERIRH 140
           + C    A++ G       D  +     A+  V    L+  +  D +   + + VE +R 
Sbjct: 63  SDCGAVKAALDGLAELSFIDNWLEHIRPAKEKVHRAELDAPSREDLVEENVLQQVENLRT 122

Query: 141 HPLL-----PPDLPVMGAIYDVDTGRV 162
           HPL+        L V G +YD++TG +
Sbjct: 123 HPLVREALAKGTLKVHGWVYDIETGEI 149


  Database: Pfam-A
    Posted date:  Oct 30, 2009  9:48 AM
  Number of letters in database: 2,039,872
  Number of sequences in database:  11,912
  
Lambda     K      H
   0.306    0.127    0.350 

Gapped
Lambda     K      H
   0.267   0.0529    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11912
Number of Hits to DB: 21,370,377
Number of extensions: 1261024
Number of successful extensions: 151607
Number of sequences better than 1.0e-03: 10
Number of HSP's gapped: 3015
Number of HSP's successfully gapped: 201
Length of database: 100,000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)