Result of HMM:PFM for cper0:BAB81626.1
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## Summary of Sequence Search
1:
:116
5:
:30 PF00515 0.0% 38.4615384615385 Tetratricopeptide repeat
37::66 PF00515 0.0% 50 Tetratricopeptide repeat
68::93 PF00515 0.0% 26.9230769230769 Tetratricopeptide repeat
101::109 PF00515 0.0% 44.4444444444444 Tetratricopeptide repeat
4::30 PF07719 0.0% 29.6296296296296 Tetratricopeptide repeat
36::66 PF07719 0.0% 48.3870967741936 Tetratricopeptide repeat
68::93 PF07719 0.0% 26.9230769230769 Tetratricopeptide repeat
12::28 PF04212 0.0% 35.2941176470588 MIT (microtubule interacting and transport) domain
49::64 PF04212 0.0% 50 MIT (microtubule interacting and transport) domain
84::108 PF04212 0.0% 37.5 MIT (microtubule interacting and transport) domain
5::27 PF08631 0.0% 47.8260869565217 Meiosis protein SPO22/ZIP4 like
34::64 PF08631 0.0% 25.8064516129032 Meiosis protein SPO22/ZIP4 like
1::116
## Multiple Alignment
- - - - + - -:70
query MSNFSKGNELYNTRNYSDAINYYKKALDNDECKCHSYYNAGVCYIKLKQYEKAIEMITKALELYQDSKYF
PF00515 ----nlGnaylklgkydeAieyyekALeln------lynlGnaylklgkydeAieyyekALelnPn-kal
PF00515 ----nlGnaylklgkydeAieyyekALeln------lynlGnaylklgkydeAieyyekALelnPn-kal
PF00515 ----nlGnaylklgkydeAieyyekALeln------lynlGnaylklgkydeAieyyekALelnPn-kal
PF00515 ----nlGnaylklgkydeAieyyekALeln------lynlGnaylklgkydeAieyyekALelnPn-kal
PF07719 ---ynlGlayyklgdyeeAleafekAleld-----alynlGlayyklgdyeeAleafekAleldPn-eal
PF07719 ---ynlGlayyklgdyeeAleafekAleld-----alynlGlayyklgdyeeAleafekAleldPn-eal
PF07719 ---ynlGlayyklgdyeeAleafekAleld-----alynlGlayyklgdyeeAleafekAleldPn-eal
PF04212 -----------eagkyeeAlelYkeAle--------------------kyeeAlelYkeAlelL------
PF04212 -----------eagkyeeAlelYkeAle--------------------kyeeAlelYkeAlelL------
PF04212 -----------eagkyeeAlelYkeAle--------------------kyeeAlelYkeAlelL------
PF08631 ----nkakklyktknydealewyklal------arvlyniGkellerktdfseavkwlkraldl------
PF08631 ----nkakklyktknydealewyklal------arvlyniGkellerktdfseavkwlkraldl------
- - * - - - -:140
query FNLAYCYSMINNNSKALRYFNLAWALDNADIDCEKAISLILSKISK------------------------
PF00515 ynlGnaylklgkydeAieyyekA-------eyyekALel-------------------------------
PF00515 ynlGnaylklgkydeAieyyekA-------eyyekALel-------------------------------
PF00515 ynlGnaylklgkydeAieyyekA-------eyyekALel-------------------------------
PF00515 ynlGnaylklgkydeAieyyekA-------eyyekALel-------------------------------
PF07719 ynlGlayyklgdyeeAleafekA-----------------------------------------------
PF07719 ynlGlayyklgdyeeAleafekA-----------------------------------------------
PF07719 ynlGlayyklgdyeeAleafekA-----------------------------------------------
PF04212 -------------skAlelikkAveaDeag.kyeeAle--------------------------------
PF04212 -------------skAlelikkAveaDeag.kyeeAle--------------------------------
PF04212 -------------skAlelikkAveaDeag.kyeeAle--------------------------------
PF08631 ----------------------------------------------------------------------
PF08631 ----------------------------------------------------------------------
[GTOP]
