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Caenorhabditis elegans (nematode) (cele0)
Gene : C08B11.1
DDBJ      :             Probable RNA binding protein
Swiss-Prot:ZYG11_CAEEL  RecName: Full=Early embryogenesis protein zyg-11;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
a.118.1c.10.1c.10.2d.17.4
:799 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   129->232 2omzA PDBj 6e-06 37.0 %
:RPS:PDB   180->238 1dceA PDBj 3e-08 20.3 %
:RPS:PDB   385->660 3ebbC PDBj 3e-04 10.0 %
:RPS:SCOP  26->238 1o6sA2  c.10.2.1 * 3e-08 28.7 %
:RPS:SCOP  301->396 2fxtA1  d.17.4.13 * 9e-04 10.5 %
:RPS:SCOP  556->685 1xqrA1  a.118.1.21 * 2e-06 13.6 %
:HMM:SCOP  130->239 1fqvA2 c.10.1.3 * 1.9e-13 33.9 %
:HMM:SCOP  404->786 1xm9A1 a.118.1.24 * 5.8e-14 19.1 %
:BLT:SWISS 1->786 ZYG11_CAEEL 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAA86661.1 GT:GENE C08B11.1 GT:PRODUCT Probable RNA binding protein GT:ORG cele0 GT:DATABASE WS208 WP:CE CE01471 WP:PRODUCT Probable RNA binding protein WP:LOCUS WBGene00006996 GB:PROTEIN_ID CAA86661.1 LENGTH 799 SQ:AASEQ MDHNAALTTCSTSAIPRLARLATERIAELIENDALPEFDHKVIASCSNDIFEVLRQKKKLNHQTLQTMCSTSRFQINKIDLMGNKVELQDLELCSNQNLVSFRLGDIDYFPNTNKIQVADVLDTALNRTSRQQLRHLDLSGRHRITSNWPTYVARKLPRLESLAFANRSTANETLSQIGASLLNLRFLDISSTCVTDISCISSLRNLEVLIMYNLNILKGDVTETLSNLTKLRVLDISRKVNTDYLQETSQDAHLDLALGIYNRSVEAIESGTATPWAELRAIDMSGLSIVQFGTDRALAFVEKIIEAHPKLEQISLLATPLDSSLIEIPNRNLQVINTVSRRSIIFALSHYANLDRPAFITHALHSVYYQLQSGYDKFSQEELKECLRLVCISMQQGLNTLPVQIAGSACLYHLCKMKRIKRLSVKEVNNCIERSLDAAEQYRSMTQLQKNVWLTICNDYLLHLDEIDFYRTCKVALDTMLLNRDASVERMTIAIVSIVTPKMRPSEAKILTTETKYVYHLVKIMNDYLEAYTREHRVGHERDNENALYTLKFTLSALWNLTDECPATCKAFLDAGGVQIAFRILKAFDYHGNVQTKVLGILNNLAEVEELHLGQLCKNEYISVLISCLDGSFNEVDSKGRYREVERSYFAAGILANLLTNTDGWESENQRDEACEKLLELIEQYPTLPSAMVSYKSFIPFSRIVRESNSNGAIMWCLWGVHHVLQHREKNKAPTYEKGYIEMFMDSGLSPIVEDMSHGHSKHIHNLDIRVVHLAREIIDIVSCHSLSSSPVRLVRRV SW:ID ZYG11_CAEEL SW:DE RecName: Full=Early embryogenesis protein zyg-11; SW:GN Name=zyg-11; ORFNames=C08B11.1; SW:KW Complete proteome; Developmental protein; Meiosis;Ubl conjugation pathway. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->786|ZYG11_CAEEL|0.0|100.0|786/799| GO:SWS:NREP 2 GO:SWS GO:0007275|"GO:multicellular organismal development"|Developmental protein| GO:SWS GO:0007126|"GO:meiosis"|Meiosis| SEG 787->798|slssspvrlvrr| BL:PDB:NREP 1 BL:PDB:REP 129->232|2omzA|6e-06|37.0|100/465| RP:PDB:NREP 2 RP:PDB:REP 180->238|1dceA|3e-08|20.3|59/566| RP:PDB:REP 385->660|3ebbC|3e-04|10.0|239/261| RP:SCP:NREP 3 RP:SCP:REP 26->238|1o6sA2|3e-08|28.7|195/381|c.10.2.1| RP:SCP:REP 301->396|2fxtA1|9e-04|10.5|76/192|d.17.4.13| RP:SCP:REP 556->685|1xqrA1|2e-06|13.6|118/264|a.118.1.21| HM:SCP:REP 130->239|1fqvA2|1.9e-13|33.9|109/286|c.10.1.3|1/1|RNI-like| HM:SCP:REP 404->786|1xm9A1|5.8e-14|19.1|267/0|a.118.1.24|1/1|ARM repeat| OP:NHOMO 195 OP:NHOMOORG 63 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------34446323332221532317F314451322423422323233343221212-1122-11232L21------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 501 STR:RPRED 62.7 SQ:SECSTR ##########################################################################HHHHHHHcccc##EEccEEEccEEEEccccTTccGGcTTcEEEccEEEccccTTcccTTccEEEcccccccEEcTTTTEETTcTTccEEEcccccccEEcGGGGTGGcTTccEEEcccccccccGGGTTcccccEEEccccccccccTTGGGGGcTTccEEEcTcccccEEcTTccccccccEEEcTTcccccccHHHHHHHHccccEEEcTTccEcEccTTTTHHHHHHHHHcccccTTTTGcTTTcEEEcGGGTTccTTccc##############################################HHHHHHHHHHHTTccTTTcccHHHHHHHHHHHHHHHTTccccccHHHHHHTTccGGGcHHHHHHHHHHTTcHHHHHHHHcccHHHH#####HHHHHHHHcTTccHHHHHHHHHHHHHHTTcHHHHHH#############HTHHHHHHHGGGGTTccHHHHHHHH#######HHHHHHHHHHHHHTcHHHHHHHHHHHHHHHT#TcccHHHHHHHHHHHHHHHTTcHHHHHHHHHTTHHHHHGGGGGccccHH###########HHHHHHHHHHHc########################################################################################################################################### DISOP:02AL 1-3| PSIPRED ccccccccccccEEHHHHHHHHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHcccccHHHHHHHccccccccEEEEcccccccHHHHHHHHHccccEEEccccccccccccccHHHHHHHHHcHHHHHcccEEEEcccccccccHHHHHHHHcccccEEEEEccccccccHHHHHHccccccEEEcccccccccccccccccccEEEEEcccccccccHHHHHccccccEEEccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEccccccccccccccHHHHHHHHHHcccccEEEEEcccccccHHHccccccEEcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHccccEEEEEEEEEEccccccccHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHccccccHHHHHHHHHHHHHHHHcHHcccccccccHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHcc //