Caenorhabditis elegans (nematode) (cele0)
Gene : C08B11.1
DDBJ : Probable RNA binding protein
Swiss-Prot:ZYG11_CAEEL RecName: Full=Early embryogenesis protein zyg-11;
Homologs Archaea 0/68 : Bacteria 0/915 : Eukaryota 63/199 : Viruses 0/175 --->[See Alignment]
a.118.1
c.10.1
c.10.2
d.17.4
:799 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 129->232 2omzA PDBj 6e-06 37.0 %
:RPS:PDB 180->238 1dceA PDBj 3e-08 20.3 %
:RPS:PDB 385->660 3ebbC PDBj 3e-04 10.0 %
:RPS:SCOP 26->238 1o6sA2 c.10.2.1 * 3e-08 28.7 %
:RPS:SCOP 301->396 2fxtA1 d.17.4.13 * 9e-04 10.5 %
:RPS:SCOP 556->685 1xqrA1 a.118.1.21 * 2e-06 13.6 %
:HMM:SCOP 130->239 1fqvA2 c.10.1.3 * 1.9e-13 33.9 %
:HMM:SCOP 404->786 1xm9A1 a.118.1.24 * 5.8e-14 19.1 %
:BLT:SWISS 1->786 ZYG11_CAEEL 0.0 100.0 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAA86661.1
GT:GENE C08B11.1
GT:PRODUCT Probable RNA binding protein
GT:ORG cele0
GT:DATABASE WS208
WP:CE CE01471
WP:PRODUCT Probable RNA binding protein
WP:LOCUS WBGene00006996
GB:PROTEIN_ID CAA86661.1
LENGTH 799
SQ:AASEQ MDHNAALTTCSTSAIPRLARLATERIAELIENDALPEFDHKVIASCSNDIFEVLRQKKKLNHQTLQTMCSTSRFQINKIDLMGNKVELQDLELCSNQNLVSFRLGDIDYFPNTNKIQVADVLDTALNRTSRQQLRHLDLSGRHRITSNWPTYVARKLPRLESLAFANRSTANETLSQIGASLLNLRFLDISSTCVTDISCISSLRNLEVLIMYNLNILKGDVTETLSNLTKLRVLDISRKVNTDYLQETSQDAHLDLALGIYNRSVEAIESGTATPWAELRAIDMSGLSIVQFGTDRALAFVEKIIEAHPKLEQISLLATPLDSSLIEIPNRNLQVINTVSRRSIIFALSHYANLDRPAFITHALHSVYYQLQSGYDKFSQEELKECLRLVCISMQQGLNTLPVQIAGSACLYHLCKMKRIKRLSVKEVNNCIERSLDAAEQYRSMTQLQKNVWLTICNDYLLHLDEIDFYRTCKVALDTMLLNRDASVERMTIAIVSIVTPKMRPSEAKILTTETKYVYHLVKIMNDYLEAYTREHRVGHERDNENALYTLKFTLSALWNLTDECPATCKAFLDAGGVQIAFRILKAFDYHGNVQTKVLGILNNLAEVEELHLGQLCKNEYISVLISCLDGSFNEVDSKGRYREVERSYFAAGILANLLTNTDGWESENQRDEACEKLLELIEQYPTLPSAMVSYKSFIPFSRIVRESNSNGAIMWCLWGVHHVLQHREKNKAPTYEKGYIEMFMDSGLSPIVEDMSHGHSKHIHNLDIRVVHLAREIIDIVSCHSLSSSPVRLVRRV
SW:ID ZYG11_CAEEL
SW:DE RecName: Full=Early embryogenesis protein zyg-11;
SW:GN Name=zyg-11; ORFNames=C08B11.1;
SW:KW Complete proteome; Developmental protein; Meiosis;Ubl conjugation pathway.
SW:EXACT T
SW:FUNC +
BL:SWS:NREP 1
BL:SWS:REP 1->786|ZYG11_CAEEL|0.0|100.0|786/799|
GO:SWS:NREP 2
GO:SWS GO:0007275|"GO:multicellular organismal development"|Developmental protein|
GO:SWS GO:0007126|"GO:meiosis"|Meiosis|
SEG 787->798|slssspvrlvrr|
BL:PDB:NREP 1
BL:PDB:REP 129->232|2omzA|6e-06|37.0|100/465|
RP:PDB:NREP 2
RP:PDB:REP 180->238|1dceA|3e-08|20.3|59/566|
RP:PDB:REP 385->660|3ebbC|3e-04|10.0|239/261|
RP:SCP:NREP 3
RP:SCP:REP 26->238|1o6sA2|3e-08|28.7|195/381|c.10.2.1|
RP:SCP:REP 301->396|2fxtA1|9e-04|10.5|76/192|d.17.4.13|
RP:SCP:REP 556->685|1xqrA1|2e-06|13.6|118/264|a.118.1.21|
HM:SCP:REP 130->239|1fqvA2|1.9e-13|33.9|109/286|c.10.1.3|1/1|RNI-like|
HM:SCP:REP 404->786|1xm9A1|5.8e-14|19.1|267/0|a.118.1.24|1/1|ARM repeat|
OP:NHOMO 195
OP:NHOMOORG 63
OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------34446323332221532317F314451322423422323233343221212-1122-11232L21------------------------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 501
STR:RPRED 62.7
SQ:SECSTR ##########################################################################HHHHHHHcccc##EEccEEEccEEEEccccTTccGGcTTcEEEccEEEccccTTcccTTccEEEcccccccEEcTTTTEETTcTTccEEEcccccccEEcGGGGTGGcTTccEEEcccccccccGGGTTcccccEEEccccccccccTTGGGGGcTTccEEEcTcccccEEcTTccccccccEEEcTTcccccccHHHHHHHHccccEEEcTTccEcEccTTTTHHHHHHHHHcccccTTTTGcTTTcEEEcGGGTTccTTccc##############################################HHHHHHHHHHHTTccTTTcccHHHHHHHHHHHHHHHTTccccccHHHHHHTTccGGGcHHHHHHHHHHTTcHHHHHHHHcccHHHH#####HHHHHHHHcTTccHHHHHHHHHHHHHHTTcHHHHHH#############HTHHHHHHHGGGGTTccHHHHHHHH#######HHHHHHHHHHHHHTcHHHHHHHHHHHHHHHT#TcccHHHHHHHHHHHHHHHTTcHHHHHHHHHTTHHHHHGGGGGccccHH###########HHHHHHHHHHHc###########################################################################################################################################
DISOP:02AL 1-3|
PSIPRED ccccccccccccEEHHHHHHHHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHcccccHHHHHHHccccccccEEEEcccccccHHHHHHHHHccccEEEccccccccccccccHHHHHHHHHcHHHHHcccEEEEcccccccccHHHHHHHHcccccEEEEEccccccccHHHHHHccccccEEEcccccccccccccccccccEEEEEcccccccccHHHHHccccccEEEccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEccccccccccccccHHHHHHHHHHcccccEEEEEcccccccHHHccccccEEcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHccccEEEEEEEEEEccccccccHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHccccccHHHHHHHHHHHHHHHHcHHcccccccccHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHcc
//
[GTOP]
