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Caenorhabditis elegans (nematode) (cele0)
Gene : C34C6.4
DDBJ      :             choline dehydrogenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  317/915 : Eukaryota  158/199 : Viruses  1/175   --->[See Alignment]
c.3.1d.16.1
:599 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   55->582 2jbvB PDBj 1e-69 36.1 %
:RPS:PDB   41->582 1cf3A PDBj 2e-86 24.9 %
:RPS:SCOP  40->343,544->581 1ju2A1  c.3.1.2 * 1e-64 27.7 %
:RPS:SCOP  339->524 1cf3A2  d.16.1.1 * 1e-43 16.3 %
:HMM:SCOP  34->586 1gpeA1 c.3.1.2 * 8.6e-77 34.3 %
:RPS:PFM   40->345 PF00732 * GMC_oxred_N 1e-73 50.0 %
:RPS:PFM   440->576 PF05199 * GMC_oxred_C 1e-22 39.3 %
:HMM:PFM   40->344 PF00732 * GMC_oxred_N 7.7e-88 38.3 290/298  
:HMM:PFM   439->577 PF05199 * GMC_oxred_C 3e-40 35.8 137/145  
:BLT:SWISS 31->582 CHDH_MOUSE 0.0 58.8 %
:PROS 117->140|PS00623|GMC_OXRED_1
:PROS 303->317|PS00624|GMC_OXRED_2

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAA91263.1 GT:GENE C34C6.4 GT:PRODUCT choline dehydrogenase GT:ORG cele0 GT:DATABASE WS208 WP:CE CE03052 WP:PRODUCT choline dehydrogenase WP:LOCUS WBGene00007917 GB:PROTEIN_ID CAA91263.1 LENGTH 599 SQ:AASEQ MLQNHAARSLQRTSKRWINWRDSMKEGTFSADIAENKPTHIIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYHTTAQKNLGNRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANCLPYFKKAETYSDATGPNDPYRGNNGPLYVKKGDAENPLHKAWLNVGKEHPLGWTNDMNGEKQEGISTMDMTIHNGERWSASKAYVHPIRNRPNLITSSGITCTRVLFDTNKAIGIEFIRKLNFVGTDSIDSYSREKIYCQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVANLPGVGQNLQDHLEIYVQQESTQPVTLYNKSSWKFPHNMIKIGLEWFTNRTGLGASSHLETGGFARSDDTVTHPDIQFHFLPSTVHDDGRTNGTCHGYQVHVGPMRSQSKGYIMLQAKDPRRAPIINPNYMEEDSDWREFRKCIRVSRELFASKAFDEFRGKELAPGPDCQSDADIDRFVKEKAASAYHPSCTCKMGSENDKMAVVNPETMGVYGTENLKVVDASVMPSIVSGNLNAPVIMMAERAADLIKHKKQLLPPSDANVWHHN BL:SWS:NREP 1 BL:SWS:REP 31->582|CHDH_MOUSE|0.0|58.8|534/596| PROS 117->140|PS00623|GMC_OXRED_1|PDOC00543| PROS 303->317|PS00624|GMC_OXRED_2|PDOC00543| BL:PDB:NREP 1 BL:PDB:REP 55->582|2jbvB|1e-69|36.1|479/530| RP:PDB:NREP 1 RP:PDB:REP 41->582|1cf3A|2e-86|24.9|530/581| RP:PFM:NREP 2 RP:PFM:REP 40->345|PF00732|1e-73|50.0|290/296|GMC_oxred_N| RP:PFM:REP 440->576|PF05199|1e-22|39.3|135/140|GMC_oxred_C| HM:PFM:NREP 2 HM:PFM:REP 40->344|PF00732|7.7e-88|38.3|290/298|GMC_oxred_N| HM:PFM:REP 439->577|PF05199|3e-40|35.8|137/145|GMC_oxred_C| GO:PFM:NREP 3 GO:PFM GO:0016614|"GO:oxidoreductase activity, acting on CH-OH group of donors"|PF00732|IPR000172| GO:PFM GO:0050660|"GO:FAD binding"|PF00732|IPR000172| GO:PFM GO:0016614|"GO:oxidoreductase activity, acting on CH-OH group of donors"|PF05199|IPR007867| RP:SCP:NREP 2 RP:SCP:REP 40->343,544->581|1ju2A1|1e-64|27.7|305/351|c.3.1.2| RP:SCP:REP 339->524|1cf3A2|1e-43|16.3|184/196|d.16.1.1| HM:SCP:REP 34->586|1gpeA1|8.6e-77|34.3|347/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 2067 OP:NHOMOORG 477 OP:PATTERN --------------------------------------------1----------------------- ---1211----11133222-24--4722222254443156---11-1--1--2222-2--211-216312------------1-----------------------------------------------------------------2------------------1-2---------------1---------------------------------------------11-1111111111111111111---------------------------------------------------------------------------------------------------------------------------4331-------766--23324345485353453-213--423393-93314586577622-21237222253622222222222-1-1------------------------------12591-242-2845777444444489444436H495765-14222112232223912----11--------1-1----1---11----------------------2--------------------------------23-41221-1111111------11-11---1---------11----21111111111-111111-11111111-11-121111-1----------------2-----1----1-1111-1111--------------4123---------------111211122---44443333234222111-------------2-----112221111211------------------------------------------------------------------ ----111-211---2HGTHL9CEUTSL6769884432454444555SICFFKTQNKIJ95451----------2------2--------VhXGZMB32224892-1-2925111113111111132111351-111111111111-11111111111129KH6C2HnGKMn1123111-----111397O4C2187754 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---- STR:NPRED 558 STR:RPRED 93.2 SQ:SECSTR #################################cccccEEEEEcccHHHHHHHHHHTTcTTccEEEEEcccccTTccHHHHcGGGTTTTTTcTcTcccEEcccccTTTccccEEcccccTTGGGGTcccccccccHHHHHHHHHTccTTccHHHHHHHHHHHEEEccccHHHHHHcccEEEccccccccccTHHHHHHHHHHTTTccccccTTcccccEEEcccccccTcccccHHHHHTGGGTTcTTEEEEEccEEEEEEEEccccccEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEcccTTTHHHHHHHTTcccHHHHGGGTccccccccTTTccccccEEEEEEEEEcGGGccccEEEEEEEGGGHHHHHHHHHHcHHHHHHHHHHTTccccHHHHHHHHHHHHHHHTTccEEEEEEEEcTTEEEEEEEEcccccccEEEEccccGGccEEEEccTTccHHHHHHHHHHHHHHHHHHTcGGGGGTEEEEEEcGGGccTTccHHHHGGGccEEccccccTTcccTcGGGTccccTTTcccTTcccEEEccTTccccccccccHHHHHHHHHHHHHHHHHHTcccccc######## DISOP:02AL 1-6, 592-599| PSIPRED ccccccccccccccccccccHHHHccccccHHHccccccEEEEcccHHHHHHHHHHHHccccEEEEEEcccccccccccEEccHHHHHHHccccccccccccccccccccEEEEEccccccccHHHHccEEEcccHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccEEcccccccccccccHHHHHHHHHHccccEEEEccEEEEEEEEccEEEEEEEEEcccEEEEEccccccEEEEEEccEEEEEEccHHHHHHHHHcccccHHHHHHccccEEEccHHHHHHHcccEEEEEEEEEccccccccccccccccHHHHHHHHHHHccccccccccccccEEEEccccccccccEEEEEHHHHcccccccccccEEEEEEEEEccccccEEEEcccccccccEEEccccccHHHHHHHHHHHHHHHHHHHcccHHHHcccccccccccccHHHHHHHHHHHccEEEccEEEEEccccccccccEEccccEEEEcccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccc //