[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Caenorhabditis elegans (nematode) (cele0)
Gene : C36B7.6
DDBJ      :             type-I thrombospondin TSR repeats
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  164/199 : Viruses  0/175   --->[See Alignment]
c.8.10
:602 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  56->128 1zl0A1  c.8.10.1 * 1e-06 26.5 %
:RPS:PFM   27->467 PF05602 * CLPTM1 e-107 48.4 %
:HMM:PFM   26->467 PF05602 * CLPTM1 2.3e-141 41.0 429/434  
:BLT:SWISS 27->601 CLPT1_DANRE e-179 55.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID AAK68233.2 GT:GENE C36B7.6 GT:PRODUCT type-I thrombospondin TSR repeats GT:ORG cele0 GT:DATABASE WS208 WP:CE CE34267 WP:PRODUCT type-I thrombospondin TSR repeats WP:LOCUS WBGene00016469 GB:PROTEIN_ID AAK68233.2 LENGTH 602 SQ:AASEQ MADAVAPAAQAAGENAPAAQPQSWGSILFGILKQCMMFYFISTMLGKMGGSQSKTNSTAAANVKGMPPSVNLFPPGQIYDFYLYLDDSEERFNHFENGFLFAQKKGLRYGDWTGGPNKDGSYVFEKTFPTPEVLLRNQSYYLHAFLVKNGQSPNPADKNYIRREVVYGVHQLNKYKKKHYKKTANLLTGVSEQSDEDLAKAEIMKFEILNFWHPNMSVNIVDDHSQWQKGAIPPPLDKDVKFAPNGEFYHPILFFNNYWNLGADYMPINETVKELKLSVTFYPLSIFKYQMYASQNMRSQWSDYLHTEKEDDDSVKVALLETNPILLGVTIAVSLLHTVLEFLAFKNDIQFWRSRKDLVGLSVRSVLFNIFQSLIVFLYICDNETNFMVKFSVGAGLLIECWKIPKVMNVEFDRTNPILGVIPRLKFSDKGSYVESDTKVYDQMAFRYLSWVLFPLLVGYAVYSIIYVEQRGWYSWVLNMLYGYLLMFGFITMTPQLFINYKLKSVAHLPWRMLTYKFINTFIDDLFAFVIKMPLLYRIGCFRDDIIFLIYLYQRWIYRVDPTRMNEYGTSGEHEHGVPEPVEGTETAKSDTPAIEESKKDK BL:SWS:NREP 1 BL:SWS:REP 27->601|CLPT1_DANRE|e-179|55.0|569/631| TM:NTM 7 TM:REGION 25->47| TM:REGION 321->343| TM:REGION 359->381| TM:REGION 384->406| TM:REGION 446->468| TM:REGION 475->497| TM:REGION 529->551| SEG 2->22|adavapaaqaagenapaaqpq| SEG 174->182|kykkkhykk| RP:PFM:NREP 1 RP:PFM:REP 27->467|PF05602|e-107|48.4|415/420|CLPTM1| HM:PFM:NREP 1 HM:PFM:REP 26->467|PF05602|2.3e-141|41.0|429/434|CLPTM1| RP:SCP:NREP 1 RP:SCP:REP 56->128|1zl0A1|1e-06|26.5|68/138|c.8.10.1| OP:NHOMO 312 OP:NHOMOORG 164 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1111112-411-111-11111111111111111111121111111111111111-11111111----1---------------------11111111111111211-2B163333232222222222524P2-435222-222221221132-2211223112222122223332-113H111-111331211212223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 8-23, 46-66, 190-205, 299-311, 429-439, 570-602| PSIPRED cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEccccccEEEEEEEEccccccccccccccEEEEEcccEEEEccccccccEEEEEEEEccccHHHHccccEEEEEEEEEccccccccccccccccEEEEEEEEccccccccHHHHHHcccccccccHHHccccccccEEEEEEcccEEEEEEEcccccccccccHHHHccEEEEccccEEEEEEEEccHHHHHHccEEEcccEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHHHHHHccccccEEEEHHHHHHHHHHHHcccEEEEEEEEEccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEcEEEEccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccccccccccccccccccccccccccccc //