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Caenorhabditis elegans (nematode) (cele0)
Gene : D2013.7
DDBJ      :             RNA adenosine deaminase like
Swiss-Prot:EIF3F_CAEEL  RecName: Full=Eukaryotic translation initiation factor 3 subunit F;         Short=eIF3f;AltName: Full=Eukaryotic translation initiation factor 3 subunit 5;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  157/199 : Viruses  0/175   --->[See Alignment]
:294 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   34->150 2o96A PDBj 1e-08 30.1 %
:RPS:PFM   6->94 PF01398 * Mov34 3e-12 38.3 %
:HMM:PFM   3->115 PF01398 * Mov34 4.1e-26 24.8 105/116  
:HMM:PFM   216->287 PF12081 * GldM_N 0.00062 23.9 71/194  
:BLT:SWISS 1->294 EIF3F_CAEEL e-169 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAA87773.1 GT:GENE D2013.7 GT:PRODUCT RNA adenosine deaminase like GT:ORG cele0 GT:DATABASE WS208 WP:CE CE00932 WP:PRODUCT RNA adenosine deaminase like WP:LOCUS WBGene00001229 GB:PROTEIN_ID CAA87773.1 LENGTH 294 SQ:AASEQ MASNLTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMGYYEKGSIQVTNCFAIPFNESNDDLEIDDQFNQQMISALKKTSPNEQPVGWFLTTSDITSSCLIYHDYYVRVITEASARRESPPIVVLTIDTTFSGDMSKRMPVRAYLRSKAGIPGAAGPHCAIFNPLRVELAAFPGELVAMQLIEKALDSRRREATLESGLEQLETSTAQMIEWLERMLHYVEDVNKNGEKPGDAQIGRQLMDIVTASSNNMQPEKLDTLVKNTLRDYVMVSYLAKLTQTQLQVHERLVSA SW:ID EIF3F_CAEEL SW:DE RecName: Full=Eukaryotic translation initiation factor 3 subunit F; Short=eIF3f;AltName: Full=Eukaryotic translation initiation factor 3 subunit 5; SW:GN Name=eif-3.F; ORFNames=D2013.7; SW:KW Complete proteome; Cytoplasm; Initiation factor; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->294|EIF3F_CAEEL|e-169|100.0|294/294| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003743|"GO:translation initiation factor activity"|Initiation factor| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| BL:PDB:NREP 1 BL:PDB:REP 34->150|2o96A|1e-08|30.1|103/158| RP:PFM:NREP 1 RP:PFM:REP 6->94|PF01398|3e-12|38.3|81/113|Mov34| HM:PFM:NREP 2 HM:PFM:REP 3->115|PF01398|4.1e-26|24.8|105/116|Mov34| HM:PFM:REP 216->287|PF12081|0.00062|23.9|71/194|GldM_N| OP:NHOMO 251 OP:NHOMOORG 157 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 2112331-2---222-111-111111111111111-111111111111111111-11111-11------1---1----------1111-12112211211111111-13-2111111112111111111393-125-1121-11--111-1111111111111111-3111-1112222U---3231731322222221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 103 STR:RPRED 35.0 SQ:SECSTR #################################ccccEEEEEEEEcccEEEEEEEEEccEEEccccTTccHHHHHHHHHHHHHcccccEEEEEEEccccccTTHHHHHHH#########HHTTcTTcEEEEEcc#####ccccccEEEEE################################################################################################################################################ DISOP:02AL 1-2, 28-34, 190-212, 293-294| PSIPRED ccccEEEEEEHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEccEEEEEEEEEEEEccccccEEEcHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccEEEEEEEccccccccEEEEEEEEccEEEccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //