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Caenorhabditis elegans (nematode) (cele0)
Gene : F10G7.2
DDBJ      :             2 leucine rich domains
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  174/199 : Viruses  0/175   --->[See Alignment]
b.34.9b.40.1
:914 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->229 3bdlA PDBj 6e-10 25.3 %
:BLT:PDB   341->896 3bdlA PDBj e-106 43.2 %
:RPS:PDB   25->330 3bdlA PDBj 7e-22 22.2 %
:RPS:PDB   341->896 3bdlA PDBj 4e-60 40.1 %
:RPS:SCOP  25->167 1a2tA  b.40.1.1 * 9e-16 20.0 %
:RPS:SCOP  195->326 1a2tA  b.40.1.1 * 4e-07 20.4 %
:RPS:SCOP  343->472 1a2tA  b.40.1.1 * 2e-14 13.8 %
:RPS:SCOP  717->808 2diqA1  b.34.9.1 * 7e-18 24.4 %
:HMM:SCOP  15->175 1joqA_ b.40.1.1 * 1.7e-19 32.6 %
:HMM:SCOP  186->332 1joqA_ b.40.1.1 * 2e-26 27.0 %
:HMM:SCOP  334->499 1joqA_ b.40.1.1 * 4.7e-22 32.9 %
:HMM:SCOP  517->675 1joqA_ b.40.1.1 * 1.2e-26 34.7 %
:HMM:SCOP  714->811 2diqA1 b.34.9.1 * 4e-19 33.3 %
:RPS:PFM   53->167 PF00565 * SNase 2e-09 35.6 %
:RPS:PFM   399->473 PF00565 * SNase 2e-07 36.8 %
:RPS:PFM   554->639 PF00565 * SNase 9e-05 33.7 %
:RPS:PFM   700->808 PF00567 * TUDOR 4e-19 41.5 %
:HMM:PFM   53->167 PF00565 * SNase 1.4e-08 24.3 103/108  
:HMM:PFM   221->327 PF00565 * SNase 1.2e-18 30.1 103/108  
:HMM:PFM   368->491 PF00565 * SNase 2.6e-12 30.2 106/108  
:HMM:PFM   552->667 PF00565 * SNase 5.2e-27 36.9 103/108  
:HMM:PFM   815->905 PF00565 * SNase 1.3e-07 23.5 85/108  
:HMM:PFM   688->807 PF00567 * TUDOR 1.4e-29 36.4 118/122  
:BLT:SWISS 24->913 SND1_PONAB 0.0 44.0 %
:REPEAT 2|26->294|345->636
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID AAA81130.1 GT:GENE F10G7.2 GT:PRODUCT 2 leucine rich domains GT:ORG cele0 GT:DATABASE WS208 WP:CE CE02626 WP:PRODUCT 2 leucine rich domains WP:LOCUS WBGene00006626 GB:PROTEIN_ID AAA81130.1 LENGTH 914 SQ:AASEQ MTDAAAATPTVPPPAASSANPAVRRGLVKSVLSGDAVILQGQPHNGPPPEWTVYLSNVTAPRLGRRPTDSASATPDEPYAWDSREYLRQKLVGQFVTFVRDFTATSGRDHGRIYLGGTSPADAENVAEGAVSAGLLEVRQGKVADEYSTKLLELQEQAKSAGRGKWNSNAGTIRDIRWVIDNPRELVDKYAQKPIDAVIEMVRDGSTVRAFLLPNFEYITLQLSGVRAPSTRNPNAADSRAEAFSEEAKFFAESRLLQRDVQIILESTSNQNFVGSIVHPKGNIAESLLREGYAKCVDWSIGLCTGGAQKLRDAERQAKEKRLRLWKSYQPTSSAYSGDRKAFTGKVVEIVLSDAVVVQKDDGSEVKLHLSSIRLPRESGDDKATGGPGRQFRPLYDIPFMFQAREFLRKRLLGKKVQIQIDYVQPKSENFPEKTCATIKIGDQNIAEGLISRGLSKVVRHRADDENRSSEYDTLLAAEANAEKGKKGLFADKTAEKKDTHRIQEITGDLAKAKQFLPYLQRGGRAEGVVEFLSGGSRLRIYIPKETVLITFLLGGINCPKGARVGPGGVSTGAAEPFADEAAAFTRKLVLQHEVQLEVESTDKNGNFVGYLYVSPDGNTSRAINLSEALVENGLASLHFTAERSGHYNALLSAENKAKKAKKNIWANFTEEQHQEEVEVQQADTSERKQNFRQVAVTDIAPGALRFSAQNIEDGPKIEKMTTEMRQALAEHPPLAGSYTTKRGDLCVAKFSQDGQWYRCKVESVRAGQAEIVYIDYGNRETIEAVKLAQIPAGFANFPAGVREYNLALAKLPNEDYVQLTSDAFAQYLFGHSSVFINSEYKVGTSEYVTVYYDSGNKKVDIGKSLIAEGLALADHRREPRLQTLVNDYNTTEEVARKSRKNIWEYGDFTGNDI BL:SWS:NREP 1 BL:SWS:REP 24->913|SND1_PONAB|0.0|44.0|868/910| NREPEAT 1 REPEAT 2|26->294|345->636| SEG 4->23|aaaatptvpppaassanpav| SEG 239->255|sraeafseeakffaesr| SEG 475->489|llaaeanaekgkkgl| SEG 574->585|aaepfadeaaaf| SEG 649->668|nallsaenkakkakkniwan| SEG 671->682|eeqhqeevevqq| BL:PDB:NREP 2 BL:PDB:REP 28->229|3bdlA|6e-10|25.3|192/537| BL:PDB:REP 341->896|3bdlA|e-106|43.2|526/537| RP:PDB:NREP 2 RP:PDB:REP 25->330|3bdlA|7e-22|22.2|300/537| RP:PDB:REP 341->896|3bdlA|4e-60|40.1|526/537| RP:PFM:NREP 4 RP:PFM:REP 53->167|PF00565|2e-09|35.6|104/107|SNase| RP:PFM:REP 399->473|PF00565|2e-07|36.8|67/107|SNase| RP:PFM:REP 554->639|PF00565|9e-05|33.7|74/107|SNase| RP:PFM:REP 700->808|PF00567|4e-19|41.5|106/120|TUDOR| HM:PFM:NREP 6 HM:PFM:REP 53->167|PF00565|1.4e-08|24.3|103/108|SNase| HM:PFM:REP 221->327|PF00565|1.2e-18|30.1|103/108|SNase| HM:PFM:REP 368->491|PF00565|2.6e-12|30.2|106/108|SNase| HM:PFM:REP 552->667|PF00565|5.2e-27|36.9|103/108|SNase| HM:PFM:REP 815->905|PF00565|1.3e-07|23.5|85/108|SNase| HM:PFM:REP 688->807|PF00567|1.4e-29|36.4|118/122|TUDOR| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00565|IPR006021| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF00565|IPR006021| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00565|IPR006021| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF00565|IPR006021| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00565|IPR006021| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF00565|IPR006021| RP:SCP:NREP 4 RP:SCP:REP 25->167|1a2tA|9e-16|20.0|130/135|b.40.1.1| RP:SCP:REP 195->326|1a2tA|4e-07|20.4|126/135|b.40.1.1| RP:SCP:REP 343->472|1a2tA|2e-14|13.8|116/135|b.40.1.1| RP:SCP:REP 717->808|2diqA1|7e-18|24.4|90/97|b.34.9.1| HM:SCP:REP 15->175|1joqA_|1.7e-19|32.6|144/0|b.40.1.1|1/5|Staphylococcal nuclease| HM:SCP:REP 186->332|1joqA_|2e-26|27.0|141/0|b.40.1.1|2/5|Staphylococcal nuclease| HM:SCP:REP 334->499|1joqA_|4.7e-22|32.9|149/0|b.40.1.1|3/5|Staphylococcal nuclease| HM:SCP:REP 517->675|1joqA_|1.2e-26|34.7|144/0|b.40.1.1|4/5|Staphylococcal nuclease| HM:SCP:REP 714->811|2diqA1|4e-19|33.3|96/0|b.34.9.1|1/1|Tudor/PWWP/MBT| OP:NHOMO 244 OP:NHOMOORG 174 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1---111-3111111-1111111111111111111111111111111111111111111111111----1--111------1111111-12111111111111111-11161112331111131121223F1-331111121131121111111-2-222212111113131121-111A2111-1122121112311- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 869 STR:RPRED 95.1 SQ:SECSTR #######################EEEEEEEEccccEEEEEETTEEETTEEEEEEETTEEcccccccccGGGTTTcccTTHHHHHHHHHHHHHccccEEEEEcccccccTTccEEETEEEEETTEEHHHHHHHTTccEEcccTTccTTHHHHHHHHHHHHHTTcGGGccccccEEcTTcHHHHHHHHHHHHHcccEEEEEEEEccccEEEEEEEETTEEEEEEETTEEccTTccTTHHHHHHHHHHHHHHHHHHHHHHTcccEEEEEccccccEEEEEEETTEEHHHHHHHTTccEEEccccTTccTTHHHHHHHHHHHHHTTcGGGTTcc#########ccEEEEEEEEEETTTEEEEEcTTccEEEEEETTEEccccTTTTcccGGGTTTccHHHHcTTHHHHHHHHHHHHTTcEEEEEEEEEEccccccccEEEEEEEETTEEHHHHHHHTTccEEcccccTTccccTTHHHHHHHHHHHHHTTcGGGcccccc###ccccEEcTTcHHHHHHHHHHHHHTcEEEEEEEEEccccEEEEEETTTTEEEEEEEccEEcccccEEETTEcTEEcccTTHHHHHHHHHHHHTTcEEEEEEEEEcTTccEEEEEEETTTT###TTEEHHHHHHHTTccEEcGGGTTcTTHHHHHHHHHHHHHHTcGGGccccHHHTcGGGcccccccccccccccEEEEEEEEcTTcEEEEEEGGGHHHHHHHHHHHHHHHHHccccTTcccccTTcEEEEEcTTTccEEEEEEEEEETTEEEEEETTTccEEEEcGGGEEcccGGGcTTTcccEEEEETTEEccccHHHHHHHHHHHHHHHTTEEEEEEEEEccccccEEEEEETEETTcccHHHHHHHTTccEEcccccGGGHHHHHHHHHHHHTcHHTTcGGGTTc####### DISOP:02AL 1-22, 66-74, 234-238, 326-343, 382-385, 507-509, 568-569, 652-664, 666-668, 671-684| PSIPRED ccccccccccccccccccccccEEEEEEEEEEEccEEEEEcccccccccEEEEEEEEccccHHHHcccccccccccccHHHHHHHHHHHHHcccEEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHEEEEcccccHHHHHHHHHHHHHHHHcccccccccccEEEEccccccHHHHHHHHccEEEEEEEEEEEEccEEEEEEEcccEEEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHccEEEEEEEEccccEEEEEEEcccccHHHHHHHccHHEEEEEEHHHccccHHHHHHHHHHHHHHcccEEEccccccccccccccEEEEEEEEEEccEEEEEEcccccEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccEEEEEEEcccHHHHHHHHHccEEEEEEEccccccccHHHHHHHHHHHHHHHccccccccccccccEEEEEccccccccHHHHHHHHHHcccccEEEEEEEcccEEEEEEccccEEEEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEEEccccccccccHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEEcccEEEEEEEccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEcccEEEEEEEEEEcccEEEEEEEEcccEEEEcHHHcEEccHHHHcccccEEEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEEEEcccEEEEEEEEccccccccHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHHHcccccEEEcccccccc //