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Caenorhabditis elegans (nematode) (cele0)
Gene : F20D1.1
DDBJ      :             spectrin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  49/199 : Viruses  0/175   --->[See Alignment]
:166 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   51->142 PF10233 * Cg6151-P 8e-11 35.9 %
:HMM:PFM   34->142 PF10233 * Cg6151-P 6.9e-34 39.4 109/113  
:BLT:SWISS 24->144 CI007_MOUSE 2e-19 33.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAB01743.1 GT:GENE F20D1.1 GT:PRODUCT spectrin GT:ORG cele0 GT:DATABASE WS208 WP:CE CE09494 WP:PRODUCT spectrin WP:LOCUS WBGene00008973 GB:PROTEIN_ID CAB01743.1 LENGTH 166 SQ:AASEQ MGAAASGVSTQMQAEHDPNAAFPWWVRFLAKGVAILGGFLSLFFGVLGLITLSATCMVAILLQMTAGALVIALEAPFCCQFVDFIEKIARFSESRALWHKAAIYGAMGLIPIFLCIELNTILGSGTIFASGVIYGFMALGKKADRSNMMAAGDPAWSPQVNQSNIP BL:SWS:NREP 1 BL:SWS:REP 24->144|CI007_MOUSE|2e-19|33.1|121/171| TM:NTM 3 TM:REGION 34->56| TM:REGION 68->90| TM:REGION 112->134| SEG 36->49|lggflslffgvlgl| RP:PFM:NREP 1 RP:PFM:REP 51->142|PF10233|8e-11|35.9|92/112|Cg6151-P| HM:PFM:NREP 1 HM:PFM:REP 34->142|PF10233|6.9e-34|39.4|109/113|Cg6151-P| OP:NHOMO 63 OP:NHOMOORG 49 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------2-111-111--11141111251-111--111111--111---1-121--1-11111131311111------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-21, 149-150, 161-166| PSIPRED cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccccc //