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Caenorhabditis elegans (nematode) (cele0)
Gene : F25D7.1
DDBJ      :             dehydrogenase
Swiss-Prot:DERL1_CAEEL  RecName: Full=Derlin-1;AltName: Full=DER1-like protein 1;AltName: Full=cDerlin-1;AltName: Full=Coelomocyte uptake defective protein 2;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  169/199 : Viruses  0/175   --->[See Alignment]
f.51.1
:245 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  10->188 2ic8A1  f.51.1.1 * 1e-07 17.7 %
:HMM:SCOP  6->191 2nr9A1 f.51.1.1 * 2.4e-05 21.6 %
:RPS:PFM   10->190 PF04511 * DER1 2e-24 39.9 %
:HMM:PFM   10->201 PF04511 * DER1 1.6e-67 36.5 189/197  
:BLT:SWISS 1->245 DERL1_CAEEL e-152 100.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAB01696.1 GT:GENE F25D7.1 GT:PRODUCT dehydrogenase GT:ORG cele0 GT:DATABASE WS208 WP:CE CE09629 WP:PRODUCT dehydrogenase WP:LOCUS WBGene00000843 GB:PROTEIN_ID CAB01696.1 LENGTH 245 SQ:AASEQ MDLENFLLGIPIVTRYWFLASTIIPLLGRFGFINVQWMFLQWDLVVNKFQFWRPLTALIYYPVTPQTGFHWLMMCYFLYNYSKALESETYRGRSADYLFMLIFNWFFCSGLCMALDIYFLLEPMVISVLYVWCQVNKDTIVSFWFGMRFPARYLPWVLWGFNAVLRGGGTNELVGILVGHAYFFVALKYPDEYGVDLISTPEFLHRLIPDEDGGIHGQDGNIRGARQQPRGHQWPGGVGARLGGN SW:ID DERL1_CAEEL SW:DE RecName: Full=Derlin-1;AltName: Full=DER1-like protein 1;AltName: Full=cDerlin-1;AltName: Full=Coelomocyte uptake defective protein 2; SW:GN Name=cup-2; Synonyms=der-1; ORFNames=F25D7.1; SW:KW Complete proteome; Endoplasmic reticulum; Membrane; Protein transport;Stress response; Transmembrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->245|DERL1_CAEEL|e-152|100.0|245/245| GO:SWS:NREP 6 GO:SWS GO:0005783|"GO:endoplasmic reticulum"|Endoplasmic reticulum| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0015031|"GO:protein transport"|Protein transport| GO:SWS GO:0006950|"GO:response to stress"|Stress response| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 2 TM:REGION 9->31| TM:REGION 104->126| RP:PFM:NREP 1 RP:PFM:REP 10->190|PF04511|2e-24|39.9|178/194|DER1| HM:PFM:NREP 1 HM:PFM:REP 10->201|PF04511|1.6e-67|36.5|189/197|DER1| RP:SCP:NREP 1 RP:SCP:REP 10->188|2ic8A1|1e-07|17.7|175/182|f.51.1.1| HM:SCP:REP 6->191|2nr9A1|2.4e-05|21.6|176/0|f.51.1.1|1/1|Rhomboid-like| OP:NHOMO 378 OP:NHOMOORG 169 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 2111222162111222221-11111121111111-1111111111---111111111-11112-----1-----------------11-13221111221111231123236323332322332442538F4-4352322222422332223233352246322222222122232222N3221331151322212223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 214-238, 243-245| PSIPRED ccHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccc //