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Caenorhabditis elegans (nematode) (cele0)
Gene : F36F12.6
DDBJ      :             synbindin TRS23 family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.169.1
:223 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   50->199 2zibA PDBj 7e-05 33.0 %
:RPS:PDB   51->221 1egiB PDBj 6e-10 20.1 %
:RPS:SCOP  65->204 1eslA1  d.169.1.1 * 5e-08 22.8 %
:HMM:SCOP  49->220 1tdqB_ d.169.1.1 * 5e-22 30.2 %
:HMM:PFM   78->181 PF00059 * Lectin_C 0.00028 28.9 83/108  
:HMM:PFM   2->40 PF05084 * GRA6 0.00071 30.8 39/215  
:BLT:SWISS 51->219 NCAN_MOUSE 2e-08 39.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID AAC19205.1 GT:GENE F36F12.6 GT:PRODUCT synbindin TRS23 family GT:ORG cele0 GT:DATABASE WS208 WP:CE CE17786 WP:PRODUCT synbindin TRS23 family WP:LOCUS WBGene00018097 GB:PROTEIN_ID AAC19205.1 LENGTH 223 SQ:AASEQ MLVVFLFVLLSTTYGIDFSDSSESCEDGGRGGHNHGRPPRPPGNGGGGRVCDAGWKFFSRPSGGWCIRVFAGRLGRDSANQVCATHGGVLSGMQNVEEINYIVSQSVRLISPEVSGGVWVGARRRPACISSGITATCTKTNSFYWTDISATGINGMLFTDGEPNNGAAALDQDCALLTVASTPLVMNAFRTGQMDDVPCTWQDPRPSSDKANKGYVCGKKARR BL:SWS:NREP 1 BL:SWS:REP 51->219|NCAN_MOUSE|2e-08|39.8|123/1268| SEG 2->10|lvvflfvll| SEG 28->49|ggrgghnhgrpprppgnggggr| BL:PDB:NREP 1 BL:PDB:REP 50->199|2zibA|7e-05|33.0|112/130| RP:PDB:NREP 1 RP:PDB:REP 51->221|1egiB|6e-10|20.1|134/143| HM:PFM:NREP 2 HM:PFM:REP 78->181|PF00059|0.00028|28.9|83/108|Lectin_C| HM:PFM:REP 2->40|PF05084|0.00071|30.8|39/215|GRA6| RP:SCP:NREP 1 RP:SCP:REP 65->204|1eslA1|5e-08|22.8|114/118|d.169.1.1| HM:SCP:REP 49->220|1tdqB_|5e-22|30.2|126/126|d.169.1.1|1/1|C-type lectin-like| OP:NHOMO 73 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------Gv-------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 164 STR:RPRED 73.5 SQ:SECSTR #################################################TccTTcEEcTTccEEEEcccGGGcccHHHHHHHHHHTTcEEcccccHHHHHHHHHHHHTTTcTTcEEEEEEEHGGGTTcEEEEEEEccccTTccccTTccccccccccccTTcccGGGcGcccEEEEEETccTTcEEETTTTccEEEEETTcc########cccEEEEEEET## DISOP:02AL 19-48| PSIPRED cHHHHHHHHHHHHEEEEccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEcccccHHHHHHHHHHcccEEcEEccHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEEEEcccccccccccccccccEEccccccccccccEEEEEEEcccccc //