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Caenorhabditis elegans (nematode) (cele0)
Gene : F42G8.12
DDBJ      :             3-oxo-5-alpha-steroid 4-dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  328/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
b.33.1f.23.12
:276 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   79->274 1l0lE PDBj 8e-62 54.9 %
:RPS:PDB   80->273 3cwbE PDBj 2e-40 53.9 %
:RPS:SCOP  79->146 1bccE2  f.23.12.1 * 5e-17 28.4 %
:RPS:SCOP  149->274 1ezvE1  b.33.1.1 * 1e-23 55.6 %
:HMM:SCOP  79->150 1bccE2 f.23.12.1 * 3.4e-16 39.1 %
:HMM:SCOP  133->273 1jm1A_ b.33.1.1 * 1.2e-39 36.4 %
:RPS:PFM   79->146 PF02921 * UCR_TM 2e-05 42.9 %
:RPS:PFM   217->256 PF00355 * Rieske 2e-06 59.0 %
:HMM:PFM   79->146 PF02921 * UCR_TM 8.1e-21 50.0 64/64  
:HMM:PFM   184->263 PF00355 * Rieske 4.6e-18 30.4 79/97  
:BLT:SWISS 66->274 UCRI_MOUSE 3e-63 55.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID AAB92071.1 GT:GENE F42G8.12 GT:PRODUCT 3-oxo-5-alpha-steroid 4-dehydrogenase GT:ORG cele0 GT:DATABASE WS208 WP:CE CE17071 WP:PRODUCT 3-oxo-5-alpha-steroid 4-dehydrogenase WP:LOCUS WBGene00002162 GB:PROTEIN_ID AAB92071.1 LENGTH 276 SQ:AASEQ MASLARSGGFAVKVISGSQQHVNFVAATPAADNVAAFRDVPAEFSTAEARQAAVSHSTGGVFTNGLAVKGINVTSRRLAHTDVTFPDMSNYRRDSTKNTQVPARDTEDQRRALPTALYYGAGGVLSLWAGKEVVQTLVSYKAMAADQRALASIEINMADIPEGKTKTFEWRGKPVFVKHRTKAEIAKEKAVPVADLRHPQHDDERVQKDEWSVVIGVCTHLGCVPIADAGDYGGYYCPCHGSHYDASGRIRKGPAPLNLHVPAYSFKDATIVIGSS BL:SWS:NREP 1 BL:SWS:REP 66->274|UCRI_MOUSE|3e-63|55.3|208/274| SEG 26->36|aatpaadnvaa| BL:PDB:NREP 1 BL:PDB:REP 79->274|1l0lE|8e-62|54.9|195/196| RP:PDB:NREP 1 RP:PDB:REP 80->273|3cwbE|2e-40|53.9|193/196| RP:PFM:NREP 2 RP:PFM:REP 79->146|PF02921|2e-05|42.9|63/63|UCR_TM| RP:PFM:REP 217->256|PF00355|2e-06|59.0|39/95|Rieske| HM:PFM:NREP 2 HM:PFM:REP 79->146|PF02921|8.1e-21|50.0|64/64|UCR_TM| HM:PFM:REP 184->263|PF00355|4.6e-18|30.4|79/97|Rieske| GO:PFM:NREP 5 GO:PFM GO:0008121|"GO:ubiquinol-cytochrome-c reductase activity"|PF02921|IPR004192| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02921|IPR004192| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00355|IPR017941| GO:PFM GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|PF00355|IPR017941| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00355|IPR017941| RP:SCP:NREP 2 RP:SCP:REP 79->146|1bccE2|5e-17|28.4|67/69|f.23.12.1| RP:SCP:REP 149->274|1ezvE1|1e-23|55.6|126/129|b.33.1.1| HM:SCP:REP 79->150|1bccE2|3.4e-16|39.1|69/69|f.23.12.1|1/1|ISP transmembrane anchor| HM:SCP:REP 133->273|1jm1A_|1.2e-39|36.4|140/202|b.33.1.1|1/1|ISP domain| OP:NHOMO 604 OP:NHOMOORG 513 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------2111----------------------------------------------------------1---11---1111--11----------11111--111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-1--1111122112322311111111111111111111121-11111131111111112111111111111111111-111-1221111111111111111111111111111111111111111111111111111121111111111111111121221221121111131-11111111111111121--------------------------------1111111111111111111111-112211-111111111111111111111111111---1111------1-------------------------------------------------------------------------------------2-----1111111------------------------1111111111111111111------------11111111111111111111111111111111-------------------------------------------------------- 11--111-211-1121111111111111111111111111111111111111111111111111111111111111111111111111-12111111111111223-1413323221-111-1111121192-212-1-2111-11-1-111111111122111122212211121111D2111142221211121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 197 STR:RPRED 71.4 SQ:SECSTR ##############################################################################cTTcccccccTTTccGGGccTTccTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccccccccccccGGGccTTcEEEccccccccEEEEccHHHHTTTTcccTTcccccccTTcccccTTEEEEccccTTTccccEEcccccccEEETTTTEEEcTTccEEEcccccccccccEEEcccccEEcE# DISOP:02AL 1-7, 47-65, 93-112, 144-148| PSIPRED cccEEcccccccHHHccHHHHHHHEccccccccccccccHHHHHHHHHHcccEEEccccccccccHHcccccccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEccccccccEEEEEEcccEEEEEEccHHHHHHHHcccccccccccccHHHHccccEEEEEEEcccccccccccccccccEEccccccEEcccccEEEccccccccccEEEEEccEEEEEEc //