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Caenorhabditis elegans (nematode) (cele0)
Gene : F44D12.4
DDBJ      :             Zinc finger, C3HC4 type (RING finger)
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  66/199 : Viruses  0/175   --->[See Alignment]
a.188.1b.36.1
:357 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   132->223 3ggeA PDBj 1e-13 39.6 %
:RPS:PDB   138->212 3bpuA PDBj 4e-09 31.9 %
:RPS:SCOP  148->233 1fc6A3  b.36.1.3 * 4e-08 20.0 %
:RPS:SCOP  268->349 1mp1A  a.188.1.1 * 2e-06 14.7 %
:HMM:SCOP  116->218 1uf1A_ b.36.1.1 * 1.4e-10 26.8 %
:HMM:PFM   147->208 PF00595 * PDZ 3.5e-05 18.3 60/81  
:BLT:SWISS 65->331 GIPC1_RAT 1e-47 39.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAA92600.2 GT:GENE F44D12.4 GT:PRODUCT Zinc finger, C3HC4 type (RING finger) GT:ORG cele0 GT:DATABASE WS208 WP:CE CE32187 WP:PRODUCT Zinc finger, C3HC4 type (RING finger) WP:LOCUS WBGene00009681 GB:PROTEIN_ID CAA92600.2 LENGTH 357 SQ:AASEQ MQGQGAPCRRSRSRSRSRGAFNRRSNYGEAHPIQPAVLASIVEEPSSSIMPVVNPLMVAAKELKFPCQLAHGSPVAIIDKWNDMEELYQSIADFFAISKDDIIFLTVNDFKPDMKNMFSGTLNFKDMLFAHVRGQATELRMVKDANVFGVTVTDNGLGNAFIKVISPGSVFDRMRPATQVGQLIEAINGESVLGKRHYQVARMLKSIRRGEECIIRLIAPKSADPGTMKMTRKTGGDLAKGTIRFKSEGGFAVEDIQDQMIQAEMCGKLNELFDQYLGVQDDQLAMRIWETASNCETLWQLSEAIKQSELSMFEFPDGLVFDMWGIIGDLKREQREKKPMPVMKNAISRPSAMKLFD BL:SWS:NREP 1 BL:SWS:REP 65->331|GIPC1_RAT|1e-47|39.7|262/333| SEG 9->25|rrsrsrsrsrgafnrrs| BL:PDB:NREP 1 BL:PDB:REP 132->223|3ggeA|1e-13|39.6|91/95| RP:PDB:NREP 1 RP:PDB:REP 138->212|3bpuA|4e-09|31.9|69/86| HM:PFM:NREP 1 HM:PFM:REP 147->208|PF00595|3.5e-05|18.3|60/81|PDZ| RP:SCP:NREP 2 RP:SCP:REP 148->233|1fc6A3|4e-08|20.0|85/92|b.36.1.3| RP:SCP:REP 268->349|1mp1A|2e-06|14.7|75/111|a.188.1.1| HM:SCP:REP 116->218|1uf1A_|1.4e-10|26.8|97/128|b.36.1.1|1/1|PDZ domain-like| OP:NHOMO 176 OP:NHOMOORG 66 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------1----------------------------------------------------------------------------------------------------1--23533341231332342328J8-337133233332232121115212231311111142111211------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 113 STR:RPRED 31.7 SQ:SECSTR ##########################################################################################################################EEEEEEccccccccEEEEEEccTTccccEEEcTTcccEEEEEccccccHHHHcTTccTTcEEEEETTEEcTTccHHHHHHHHHTccTTcEcEEEcccccccccccccccccEE########################################################################################################################## DISOP:02AL 1-58, 221-243, 332-345| PSIPRED cccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHHcccHHHEEEEEEccccccHHHHccccccHHHHHEEEccccEEEEEEEEccccEEEEEEccccccHHHEEEcccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccEEEEEEEEccccccccccccccccccccccEEEEEccccccHHHccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccccccccccc //