Caenorhabditis elegans (nematode) (cele0)
Gene : K01C8.9
DDBJ : Mitochondrial carrier proteins
Swiss-Prot:GNL3_CAEEL RecName: Full=Guanine nucleotide-binding protein-like 3 homolog;AltName: Full=Nucleostemin-1;
Homologs Archaea 42/68 : Bacteria 304/915 : Eukaryota 195/199 : Viruses 0/175 --->[See Alignment]
c.37.1
:556 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 140->384 1pujA PDBj 1e-11 28.5 %
:RPS:PDB 135->410 3cnlA PDBj 5e-06 21.3 %
:RPS:PDB 260->323 3a1tA PDBj 6e-10 39.7 %
:RPS:SCOP 140->411 1pujA c.37.1.8 * 3e-28 23.7 %
:HMM:SCOP 133->344 1pujA_ c.37.1.8 * 1.6e-38 30.5 %
:HMM:SCOP 250->557 1ni3A1 c.37.1.8 * 2.2e-18 23.3 %
:RPS:PFM 18->91 PF08701 * GN3L_Grn1 2e-05 37.8 %
:RPS:PFM 260->323 PF02421 * FeoB_N 2e-07 39.7 %
:HMM:PFM 17->93 PF08701 * GN3L_Grn1 4.5e-23 51.9 77/80
:HMM:PFM 271->338 PF01926 * MMR_HSR1 9.8e-14 35.3 68/108
:HMM:PFM 105->212 PF00009 * GTP_EFTU 7.3e-10 19.6 102/189
:HMM:PFM 259->281 PF03308 * ArgK 0.00078 34.8 23/267
:HMM:PFM 429->485 PF11290 * DUF3090 0.00076 19.3 57/171
:BLT:SWISS 1->556 GNL3_CAEEL 0.0 100.0 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAA88860.1
GT:GENE K01C8.9
GT:PRODUCT Mitochondrial carrier proteins
GT:ORG cele0
GT:DATABASE WS208
WP:CE CE02270
WP:PRODUCT Mitochondrial carrier proteins
WP:LOCUS WBGene00003821
GB:PROTEIN_ID CAA88860.1
LENGTH 556
SQ:AASEQ MAKYCLKKTSKRVSCAKRYKIEKKVRDHNRKVKKEAKKNGTTNKKEKTISVPNSCPFKEEILVQAEQEREKIKVRQEAAKEAAKIHRIEKRKNNLPANFESMVAKASKQGTEFDKKVASAAEHEKFNTLDDKTIKAYASEVRKTVEIADVIIQVLDARDPLGSRSKSVEDQVLKGGKRLVLLLNKIDLVPRENVQKWLEYLRGQFPTIAFKASTQEQKSNIGRFNSAILNNTETSKCVGADIVMKILANYCRNKDIKTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQEVELDKNIRLIDSPGVILVSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKETIMLHYNLADFNSVDQFLAQLARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYYTHPPEQGTAKEDIVVPAEVVSQFSKEFDIDAIAEEQNQIVEGLPMESDIIAPHNSDEEEDDDDEMETDVNEKKQTVTSGRKVKGPTKDDDKPVLPESLALEGNVQLNKLIKTAIKKQKKKSKKTANRADKLSDSLGNMLGGDAMEM
SW:ID GNL3_CAEEL
SW:DE RecName: Full=Guanine nucleotide-binding protein-like 3 homolog;AltName: Full=Nucleostemin-1;
SW:GN Name=nst-1; ORFNames=K01C8.9;
SW:KW Coiled coil; Complete proteome; GTP-binding; Nucleotide-binding;Nucleus.
SW:EXACT T
SW:FUNC +
BL:SWS:NREP 1
BL:SWS:REP 1->556|GNL3_CAEEL|0.0|100.0|556/556|
GO:SWS:NREP 3
GO:SWS GO:0005525|"GO:GTP binding"|GTP-binding|
GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding|
GO:SWS GO:0005634|"GO:nucleus"|Nucleus|
SEG 33->48|kkeakkngttnkkekt|
SEG 172->183|vlkggkrlvlll|
SEG 466->481|deeeddddemetdvne|
SEG 518->535|kliktaikkqkkkskkta|
BL:PDB:NREP 1
BL:PDB:REP 140->384|1pujA|1e-11|28.5|214/261|
RP:PDB:NREP 2
RP:PDB:REP 135->410|3cnlA|5e-06|21.3|225/233|
RP:PDB:REP 260->323|3a1tA|6e-10|39.7|63/254|
RP:PFM:NREP 2
RP:PFM:REP 18->91|PF08701|2e-05|37.8|74/80|GN3L_Grn1|
RP:PFM:REP 260->323|PF02421|2e-07|39.7|63/188|FeoB_N|
HM:PFM:NREP 5
HM:PFM:REP 17->93|PF08701|4.5e-23|51.9|77/80|GN3L_Grn1|
HM:PFM:REP 271->338|PF01926|9.8e-14|35.3|68/108|MMR_HSR1|
HM:PFM:REP 105->212|PF00009|7.3e-10|19.6|102/189|GTP_EFTU|
HM:PFM:REP 259->281|PF03308|0.00078|34.8|23/267|ArgK|
HM:PFM:REP 429->485|PF11290|0.00076|19.3|57/171|DUF3090|
GO:PFM:NREP 4
GO:PFM GO:0005525|"GO:GTP binding"|PF02421|IPR011619|
GO:PFM GO:0015093|"GO:ferrous iron transmembrane transporter activity"|PF02421|IPR011619|
GO:PFM GO:0015684|"GO:ferrous iron transport"|PF02421|IPR011619|
GO:PFM GO:0016021|"GO:integral to membrane"|PF02421|IPR011619|
RP:SCP:NREP 1
RP:SCP:REP 140->411|1pujA|3e-28|23.7|245/261|c.37.1.8|
HM:SCP:REP 133->344|1pujA_|1.6e-38|30.5|197/273|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases|
HM:SCP:REP 250->557|1ni3A1|2.2e-18|23.3|202/296|c.37.1.8|2/2|P-loop containing nucleoside triphosphate hydrolases|
OP:NHOMO 1254
OP:NHOMOORG 541
OP:PATTERN --111111111111111-11111------------11111111------111111111111---11-- -------------------------------------------------------------------------------------111----------------------------------------------------------1-1--1111--------1111--11--11------1---------111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111-1111-1-11--1------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1-----11111-1111111111---111--1------------1-1----11-----------------------------------11-1111-1111111111111111111111--------------------------------------------------------------------------------------------------------------1--1----------------------111-1-----------------111111111111111111111111------------------------11111111--1-1--1-----------1-1-1---11111111111--- 1133453-623444423334444444233244444334443433444444422233443444333333233223333-3333333444-49434444444343553256366A556533534649B294nY8-96C435244543343346324443646C854544455648544344X5544365943642355542 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 276
STR:RPRED 49.6
SQ:SECSTR ######################################################################################################################################ccTTHHHHHHHTTccEEEEEEETTcTTTTccTTcccTHHccTcEEEEEEEcGGGccHHHHHHHHHHHHHTTccEEEccTTTccEEEccTTccHHHHHHHHHTTcTHHHHHTccccccccccccccEEEEEEccTTccHHHHHHHHHTTcEcEEEEcTTcccEEEEEETTEEEEEEEcccccccccccHHTccHHHHHHHHccEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHTTTTccc##################################################################################################################################################
DISOP:02AL 1-53, 69-88, 416-426, 461-500, 515-540|
PSIPRED ccccccccccccHHHHHHHccccHHHcccccccccccccccHHccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccEEEEEEEcccccccccHHHHHHHHHccccEEEEEHHHHcccHHHHHHHHHHHHHccccEEEEEcHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHccccEEEccccccEEEEEEEEEccEEEEEEcccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccHHccc
//
[GTOP]
