[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Caenorhabditis elegans (nematode) (cele0)
Gene : K10D2.6
DDBJ      :             ribonuclease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  417/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
b.43.4c.23.5c.25.1
:662 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   61->662 3es9A PDBj e-170 49.0 %
:RPS:PDB   60->662 1amoA PDBj e-108 48.9 %
:RPS:SCOP  70->225 1bvyF  c.23.5.1 * 3e-42 29.5 %
:RPS:SCOP  236->502 1amoA1  b.43.4.1 * 6e-78 44.2 %
:RPS:SCOP  505->661 1b2rA2  c.25.1.1 * 2e-40 32.5 %
:HMM:SCOP  56->232 1ja1A2 c.23.5.2 * 9.9e-44 40.1 %
:HMM:SCOP  234->503 1amoA1 b.43.4.1 * 1.4e-82 42.8 %
:HMM:SCOP  505->661 1ddgA2 c.25.1.4 * 2.4e-52 35.9 %
:RPS:PFM   75->209 PF00258 * Flavodoxin_1 1e-23 48.5 %
:RPS:PFM   265->484 PF00667 * FAD_binding_1 8e-51 47.2 %
:RPS:PFM   515->615 PF00175 * NAD_binding_1 1e-08 40.0 %
:HMM:PFM   265->484 PF00667 * FAD_binding_1 6.8e-70 39.4 218/219  
:HMM:PFM   75->212 PF00258 * Flavodoxin_1 3.7e-35 41.8 134/143  
:HMM:PFM   515->625 PF00175 * NAD_binding_1 9.5e-22 33.0 103/109  
:BLT:SWISS 58->662 NCPR_DROME 0.0 51.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID AAA62544.1 GT:GENE K10D2.6 GT:PRODUCT ribonuclease GT:ORG cele0 GT:DATABASE WS208 WP:CE CE02018 WP:PRODUCT ribonuclease WP:LOCUS WBGene00001262 GB:PROTEIN_ID AAA62544.1 LENGTH 662 SQ:AASEQ MLAWIVSGLDTSDLVVLTLLAGGAIIFLFMKVFNQQPSSSRYSPTVASVTTSAAASKSNQSFIDRMKNENRQVLIMYGSQTGTAEEMSGRLAKDLTRYTKKAVVVDPEDIECEDLNRLSEVEDALLVLCIATYGEGDPTDNAVTLVEYLNAGDCDLSGVRFAVFGLGNKTYEHFNEIGIQMDKQLEKLGAKRIFHLGLGDDDANLEEDFMIWREAFLPKVAEEFGWELNTEAETMRQYQLEPVEEGKALFKGEFGRLGAYERPRPPFDVKNPYLATVAINDELHTEHSDRSCRHIEFSVEGSRIRYEAGDHLAVFPTNDPVLVDRLINMLQFDPDHAFRLVNVDEDASKRHPFPCPTTFRTALSHYVDICAPVKSHVLKAISEYCTDDTEKEFLNKLSTANEEGLKEYARYIVKERRSIVDVLTDQKTCKPPIEYLLELLPRLQARYYSIASSPRLNEEKIAICAVVTKYSIGDRDINGVCTRYLTTKDAGSKSPVFVRKSTMRLPHRTTTQVIMIGPGTGFAPFRGFLQDRQFHKNAGKEIGAMHLYYGCRHPDHDYIYKDELAKFQEDEVLTHLVCAFSRAQEHKIYVQDRLWETRDRIWDAINVGAHVYICGDARNMARDVQATLQKIFREIGGKSETEAVAYFKDMEKTKRYQADVWS BL:SWS:NREP 1 BL:SWS:REP 58->662|NCPR_DROME|0.0|51.6|603/679| TM:NTM 1 TM:REGION 7->29| SEG 9->20|ldtsdlvvltll| SEG 45->56|tvasvttsaaas| BL:PDB:NREP 1 BL:PDB:REP 61->662|3es9A|e-170|49.0|596/603| RP:PDB:NREP 1 RP:PDB:REP 60->662|1amoA|e-108|48.9|597/601| RP:PFM:NREP 3 RP:PFM:REP 75->209|PF00258|1e-23|48.5|130/137|Flavodoxin_1| RP:PFM:REP 265->484|PF00667|8e-51|47.2|214/216|FAD_binding_1| RP:PFM:REP 515->615|PF00175|1e-08|40.0|90/107|NAD_binding_1| HM:PFM:NREP 3 HM:PFM:REP 265->484|PF00667|6.8e-70|39.4|218/219|FAD_binding_1| HM:PFM:REP 75->212|PF00258|3.7e-35|41.8|134/143|Flavodoxin_1| HM:PFM:REP 515->625|PF00175|9.5e-22|33.0|103/109|NAD_binding_1| GO:PFM:NREP 6 GO:PFM GO:0010181|"GO:FMN binding"|PF00258|IPR008254| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00258|IPR008254| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00667|IPR003097| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00667|IPR003097| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00175|IPR001433| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00175|IPR001433| RP:SCP:NREP 3 RP:SCP:REP 70->225|1bvyF|3e-42|29.5|149/152|c.23.5.1| RP:SCP:REP 236->502|1amoA1|6e-78|44.2|265/269|b.43.4.1| RP:SCP:REP 505->661|1b2rA2|2e-40|32.5|151/162|c.25.1.1| HM:SCP:REP 56->232|1ja1A2|9.9e-44|40.1|177/0|c.23.5.2|1/1|Flavoproteins| HM:SCP:REP 234->503|1amoA1|1.4e-82|42.8|269/0|b.43.4.1|1/1|Riboflavin synthase domain-like| HM:SCP:REP 505->661|1ddgA2|2.4e-52|35.9|153/153|c.25.1.4|1/1|Ferredoxin reductase-like, C-terminal NADP-linked domain| OP:NHOMO 1792 OP:NHOMOORG 612 OP:PATTERN -------------------------------------------------------------------- ----1---------311----2--1------111111233-1-11-------1-------------12-1----------------------------------------111111111111111-------------------1-2111111--111--11111111111111111111111---------1311111111-111111112223111-1111--------11-1111111111111111112---1--1--1----------------------------------------------------------------------------------------------------------------1111------122121121-121--11-11-11--22322322-----11----1----43-----1------1111111111-------------------------------------1---1-11111111111122211112222-22121223--11--11111-1-2-11--3-----22111111-11-----------------------------1----------------------------111-112-1-12311111111111111111211--111-1--1111111-121111111111-1111111111111111111111231111111111111111111111111111-11111111111111-1---------11-11111111---------1111111---1111111112-22321111---------11111111111111113333332221111----11--11----------------------------------------------222 1122455-9441337675577869A97555535666655534555586677ACB45965555343333253433333-3434444355-9A474333333233C8915B6G5757B566547A7G93B4Z*8-D9F25659677626651952R676675EK36476876B43673662L5334497BB5A9676A765 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 604 STR:RPRED 91.2 SQ:SECSTR ##########################################################cccHHHHHHHHTccEEEEEEccccHHHHHHHHHTTTGGGccccEEEEcGGGccGGGGGGGGGcTTcEEEEEEEEETTTEEcGGGHHHHHHHHTcccccTTcEEEEEEEEcTTcccTTHHHHHHHHHHHHTTcEEccccEEEETTccHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccGGGccccccccTTTTTcccccccccccEEEEEEEEEEcccccccccEEEEEEEcTTccccccTTcEEEEcccccHHHHHHHHHHHTccccccccEEcccTTccccccccccccHHHHHHHTccccccccHHHHHHGGGGcccHHHHHHHHHTTccccHHHHHHHHHTTTTTccHHHHHHHcTTccccHHHHHHHccccccEEEEccccTTTcTTEEEEEEEccEEEcTTccEEEcHHHHHHHHccccEEEEEEEcccccccccTTccEEEEEEGGGGHHHHHHHHHHHHHHHTTcccccEEEEEEEccTTTccTTHHHHHHHHHTTcccEEEEEETTcccccccHHHHHHHTHHHHHHHHHHccEEEEEEETTTHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHTTcEEEEEEc DISOP:02AL 37-71| PSIPRED ccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHccccEEEEcHHHccHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccEEEEEEEEEccccccEEcccEEEEcccccHHHHHHHHHHHccccccEEEEEEccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHccccccEEEEEEcccccccEEEEEEEEEEEcccccccccccHHHHHccccccEEEEEEccccccccccccccEEEEEccHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccHHHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccEEEEEEc //