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Caenorhabditis elegans (nematode) (cele0)
Gene : R05D3.9
DDBJ      :             ATPase epsilon chain
Swiss-Prot:YNC9_CAEEL   RecName: Full=Uncharacterized protein R05D3.9;Flags: Precursor;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:646 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   258->457 2c0gA PDBj 1e-09 11.2 %
:RPS:SCOP  250->376 1qgvA  c.47.1.8 * 9e-08 14.4 %
:RPS:SCOP  373->457 2b5eA2  c.47.1.2 * 2e-07 12.0 %
:HMM:SCOP  252->361 1syrA_ c.47.1.1 * 5.4e-08 16.5 %
:HMM:SCOP  387->469 1bjxA_ c.47.1.2 * 1.2e-05 23.8 %
:HMM:PFM   397->445 PF03409 * Glycoprotein 0.00076 26.5 49/358  
:BLT:SWISS 1->646 YNC9_CAEEL 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID AAK21444.2 GT:GENE R05D3.9 GT:PRODUCT ATPase epsilon chain GT:ORG cele0 GT:DATABASE WS208 WP:CE CE31049 WP:PRODUCT ATPase epsilon chain WP:LOCUS WBGene00019882 GB:PROTEIN_ID AAK21444.2 LENGTH 646 SQ:AASEQ MWPSNRGPTLFQYSIRCLGFVAFIGVVRCHCPHMMGVKPPGPPSGPSPPGKFPDGDEGWDYDETAAPGIVPEPHFIQSTYIYRSPNVQEKTFSSRVVNVLKDIRTRLAKSARLTLENENIECSSPTDHYRCQEYPASGTWNYLIVEDQQKGAVTYTFDRKFNEKNDGTIEMALLDAFSRHSPSSLIAFASSEAEKEVGYIRALTVQEMDSLSGKRSHQKISMEKFGPNELILLEPALLEVRTGANLKLNSDSLRRIDSTKEFDKLLEEFRNVFILFWNSNRMVSLHTFNLWSRVADKIKISEDTLLAHVPCHDNADFCQGLNSEDYHTVVSYRNGQNTGKTENIGDVEFYENWVELSLSGAIQRLPNESKLSEFKKGIVGGKKRSSVTIGVFPSDQDTSFQHFQIAAEKLSGKYYVAYFINENSKPAITTYRHAEKQKRTDYSGKFDPATLMEFITKSSIPSIIGISNGFTTDLLFHQKRPILIQIGGAGEFEPFSKLSARQDARKTYIFTKIDGESEMIKKTKKALGVGENESIIVFLNKDRVHRIPISKPKCPDHLQKILQMIITSEADQVLSTKEPHPLRYLQVEKVNEVFGFEETLVLPDHTLFLDSDPFSRHPPITEGGGGGCPFMQGGGAPTESSQHSEL SW:ID YNC9_CAEEL SW:DE RecName: Full=Uncharacterized protein R05D3.9;Flags: Precursor; SW:GN ORFNames=R05D3.9/R05D3.10; SW:KW Complete proteome; Signal. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->646|YNC9_CAEEL|0.0|100.0|646/646| SEG 39->50|ppgppsgpsppg| SEG 458->467|ssipsiigis| SEG 623->635|gggggcpfmqggg| RP:PDB:NREP 1 RP:PDB:REP 258->457|2c0gA|1e-09|11.2|197/228| HM:PFM:NREP 1 HM:PFM:REP 397->445|PF03409|0.00076|26.5|49/358|Glycoprotein| RP:SCP:NREP 2 RP:SCP:REP 250->376|1qgvA|9e-08|14.4|125/130|c.47.1.8| RP:SCP:REP 373->457|2b5eA2|2e-07|12.0|83/98|c.47.1.2| HM:SCP:REP 252->361|1syrA_|5.4e-08|16.5|103/0|c.47.1.1|1/1|Thioredoxin-like| HM:SCP:REP 387->469|1bjxA_|1.2e-05|23.8|80/110|c.47.1.2|2/2|Thioredoxin-like| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 319 STR:RPRED 49.4 SQ:SECSTR #########################################################################################################################################################################################################################################################ccccEEcccTTTHHHHHTTccEEEEEEEEccHHHHHHHHHHHHHHHcccEEEEEEEEcccTTcTTHHHHHTccTTcccEEEEEccccccEEEccTTccccHHHHHHHHHHHcccccccTTccHHHHHHHTTGGGccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcTHTHHHHHHHHHHHHHHHTccccHHHHHHHHHHHTccTTEEccHHHHHHHHTTcccEEEEEEccHHHHHHHHHHHHHHHHHTTTTcEEEEEETTTccTTGGGGccccccccEEEEETTTTEEEEcccccGGGTccccccccccH############################################################################## DISOP:02AL 1-6, 38-52, 210-223, 435-442, 634-646| PSIPRED ccccccccHHHHHHHHHHHHHHHHccEEEEccHHccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccEEEEEcccEEccccccccEEccccccccEEEEEEEccccccEEEEEEcccccccccEEEEEEHHHHHccccccEEEEccccHHHHccEEEEEEHHHHHHHccccHHHEEEHHHcccccEEEEcccEEEEEcccccEEcHHHHHHHccHHHHHHHHHHHccEEEEEEccccEEEEEEEHHHHHHcccEEEccccEEEEEcccccHHHHccccccccEEEEEEEcccccccccccccHHHHHHHHEEEEHHHHHHcccHHHHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHcccEEEEEEEcccccccEEEEHHHHHHHcccccccccHHHHHHHHHHcccccEEEcccccEEHHEEEccccEEEEEcccccccHHHHHHHHHHHHHcEEEEEEcccHHHHHHHHHHHcccccccEEEEEcccEEEEccccccccHHHHHHHHHHHHcccHHHHHcccccccEEEEEEEcHHHHccccEEEEccccEEEEccccccccccccccccccccccccccccccccccccc //