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Caenorhabditis elegans (nematode) (cele0)
Gene : T25E12.8
DDBJ      :             serine\/threonine dehydratase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  45/199 : Viruses  0/175   --->[See Alignment]
d.169.1
:363 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   96->232 1qddA PDBj 8e-09 25.4 %
:BLT:PDB   249->358 1sb2B PDBj 1e-10 34.6 %
:RPS:PDB   99->236 1egiB PDBj 2e-12 16.2 %
:RPS:PDB   246->360 3c22C PDBj 2e-13 22.1 %
:RPS:SCOP  104->233 1wmyA  d.169.1.1 * 1e-13 25.2 %
:RPS:SCOP  246->359 1ja3A  d.169.1.1 * 1e-13 20.0 %
:HMM:SCOP  104->235 1dv8A_ d.169.1.1 * 5.4e-32 29.4 %
:HMM:SCOP  242->359 1dv8A_ d.169.1.1 * 9.3e-28 30.4 %
:RPS:PFM   122->232 PF00059 * Lectin_C 1e-08 28.0 %
:RPS:PFM   262->357 PF00059 * Lectin_C 5e-04 26.9 %
:HMM:PFM   126->232 PF00059 * Lectin_C 7.2e-14 29.0 100/108  
:HMM:PFM   261->356 PF00059 * Lectin_C 1.6e-11 26.6 94/108  
:BLT:SWISS 132->357 MRC1_HUMAN 4e-13 30.3 %
:TM
:REPEAT 2|112->237|247->361
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAB04826.1 GT:GENE T25E12.8 GT:PRODUCT serine\/threonine dehydratase GT:ORG cele0 GT:DATABASE WS208 WP:CE CE16469 WP:PRODUCT serine\/threonine dehydratase WP:LOCUS WBGene00012023 GB:PROTEIN_ID CAB04826.1 LENGTH 363 SQ:AASEQ MPGCLPSVFEKWSQFLKFHRRIILIGGASEIIIITVAVIVTYCLTKQPACEIYTGTSSPAFQTSTVSSFTESLSNSDTSPASTTTEPLPTSSTPGKIPPNNITCAVGFTYINHKCWRLFTDLQTRENADGACMRYGGSTLFSIRNEQENNAMLGFMLNAGVDNLWTGLICVGKTTFSCTWDMESGTTSVYNSFASESPDNTYGNCVYFIITGTQAGQWKSGLCNMTMSFVCELPPTVHDKNCINNYNNHCYLRYDDSDTVVEAQRFCNTKCANLVSIHSANENRFIQTIYYVDGYIALGAVAPIIDYIVWMDGSPQLYNNIQDNSNGTCVFMRILWGGAGYWYTIDCVKRSWFLCKRPAGIVC BL:SWS:NREP 1 BL:SWS:REP 132->357|MRC1_HUMAN|4e-13|30.3|211/1456| TM:NTM 1 TM:REGION 22->44| NREPEAT 1 REPEAT 2|112->237|247->361| SEG 22->41|iiliggaseiiiitvavivt| SEG 78->94|tspasttteplptsstp| BL:PDB:NREP 2 BL:PDB:REP 96->232|1qddA|8e-09|25.4|134/144| BL:PDB:REP 249->358|1sb2B|1e-10|34.6|107/124| RP:PDB:NREP 2 RP:PDB:REP 99->236|1egiB|2e-12|16.2|136/143| RP:PDB:REP 246->360|3c22C|2e-13|22.1|113/131| RP:PFM:NREP 2 RP:PFM:REP 122->232|PF00059|1e-08|28.0|107/109|Lectin_C| RP:PFM:REP 262->357|PF00059|5e-04|26.9|95/109|Lectin_C| HM:PFM:NREP 2 HM:PFM:REP 126->232|PF00059|7.2e-14|29.0|100/108|Lectin_C| HM:PFM:REP 261->356|PF00059|1.6e-11|26.6|94/108|Lectin_C| GO:PFM:NREP 2 GO:PFM GO:0005488|"GO:binding"|PF00059|IPR001304| GO:PFM GO:0005488|"GO:binding"|PF00059|IPR001304| RP:SCP:NREP 2 RP:SCP:REP 104->233|1wmyA|1e-13|25.2|127/140|d.169.1.1| RP:SCP:REP 246->359|1ja3A|1e-13|20.0|105/115|d.169.1.1| HM:SCP:REP 104->235|1dv8A_|5.4e-32|29.4|119/128|d.169.1.1|1/2|C-type lectin-like| HM:SCP:REP 242->359|1dv8A_|9.3e-28|30.4|112/128|d.169.1.1|2/2|C-type lectin-like| OP:NHOMO 177 OP:NHOMOORG 45 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------8331123--1111-1212-3B31215-21-3112311-1-1--2-452231--13------Yi2------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 268 STR:RPRED 73.8 SQ:SECSTR ###############################################################################################ccHcTTcEEcTTccEEEEEEcccGGGcccHHHHHHHHHHTTcEEEcccccHHHHHHHHHHHHTTTcTTcEEEEEEEccccETTccccTTccccccccccTTcccGGGcccEEEEEETTTTccEEEEETTcccEEEEEEETTccccHHHHHETTEEEEEccccccHHHHHHHHHHTTcEEcccccHHHHHHHHHHHTTccEEEEEEEETTTTEEEETTcccccHHHHcGGGcccEEEEcEcccccccEEEEcTTcccEEEEEEEccccc DISOP:02AL 1-2| PSIPRED cccccHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHHEEEEcccccccccccEEEEEEcccEEEEEcccccccccccccccccccccccccccccccccccccccEEEccEEEEEEcccccHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHccccEEEEEEEEccccccEEEEEEccccEEccccccccccccccccEEEEEEEEcccccEEEEcccccccEEEEEEccccccccccccccEEEEEEEccccHHHHHHHHHHcccEEcEEccHHHHHHHHHHHccccEEEEEEEEccccEEEEEcccEEccccccccccccEEEEEEccccccEEEcccccccccEEEEEcccccc //