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Caenorhabditis elegans (nematode) (cele0)
Gene : Y67A10A.9
DDBJ      :             nucleolar protein required for pre-rRNA splicing
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:734 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   37->225 PF07062 * Clc-like 1e-36 49.4 %
:HMM:PFM   18->236 PF07062 * Clc-like 6.9e-36 31.5 197/212  
:BLT:SWISS 99->146 CLCA_ARATH 4e-04 31.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAB60450.1 GT:GENE Y67A10A.9 GT:PRODUCT nucleolar protein required for pre-rRNA splicing GT:ORG cele0 GT:DATABASE WS208 WP:CE CE24570 WP:PRODUCT nucleolar protein required for pre-rRNA splicing WP:LOCUS WBGene00013458 GB:PROTEIN_ID CAB60450.1 LENGTH 734 SQ:AASEQ MIDAGSSSTKCSRKTALAIHFTLSLIAFLLCLLGLISPSWQQVNLENGRTEHHHGLWLDCKRDFSFDYGRSREYYETLYRRDMQGSPFAEFFLPQLQCVYKFDYYIDQEDLYDHNHDENRIQNDAYQHLFLGWKIAALIGVGVGVLFAGCAVLMGVCAFCHRTFICACTVIITIATLLSLLGSGAFYFWGNTQDNKVIKEEDENETYEQVLGWAFYCHLLGTLLLGFCSIMGCCVTSISTSKSTSQLVSIELVENGDGSELLSSNGQNFKRSFSAVYRVDSSALRQWEKSYLKNAMEKGDVEQNFKRTASVPNFSKNHRKSRRAQRQQSGHDFFSSTSNITEISHFGSNITMNTQMTQQTRDTTQTAPAAVACPVPPGKPLKSALKTPQQTRREHIIQPPEPVINTYEYCDSTIGVSSFLGSRTPTRPNHPYDEVYETIPGEDYLEPKSVRNNRLSNSTLSTIDMEHNQKMLQKTLPPVHGSSQSIPLPQKTQQKSTVIDDPRPVSFGEDPRDRDINLFKIRERTRIEKEERERFIKTAMLPPPPPVLPVKPKNIRDFGIDLSKESVGSCKVEETGSRAMLPQGKNSEISNYAINNPCYDDSDDFPPPPSEIGLNTFATKQKSITNLSFRGLSGAQHIFDRPESTVSVSSSASNNKNDVNNRRNPLTNISQHSLVNRRLLNVMPDEVDRSVGSSTVLENEVQDSPISYAQDAEVRLNLFMKDSTMKNNQDETTV BL:SWS:NREP 1 BL:SWS:REP 99->146|CLCA_ARATH|4e-04|31.9|47/775| TM:NTM 4 TM:REGION 16->38| TM:REGION 131->153| TM:REGION 166->188| TM:REGION 217->239| SEG 23->35|lsliafllcllgl| SEG 163->176|tficactviitiat| SEG 351->377|tmntqmtqqtrdttqtapaavacpvpp| SEG 519->538|fkirertriekeererfikt| SEG 541->553|lpppppvlpvkpk| SEG 600->610|ddsddfpppps| SEG 644->664|stvsvsssasnnkndvnnrrn| RP:PFM:NREP 1 RP:PFM:REP 37->225|PF07062|1e-36|49.4|166/209|Clc-like| HM:PFM:NREP 1 HM:PFM:REP 18->236|PF07062|6.9e-36|31.5|197/212|Clc-like| GO:PFM:NREP 1 GO:PFM GO:0016021|"GO:integral to membrane"|PF07062|IPR010761| OP:NHOMO 9 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------36-------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-10, 312-333, 356-365, 482-483, 486-497, 576-578, 645-664, 724-734| PSIPRED cccccccccccccccEEEEHHHHHHHHHHHHHHHHccccEEEEEccccccccccccEEEEEEccccccccccHHHHHHHHHcccccccHHHcccccEEEEEccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccccHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccHHHHHccHHHHHHHHcccccccHHHHHHHHccHHHHHHHHcccccccccccHHHHHHHccccccccccHHHccccccccEEEHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEEHHHHHccHHHHHHHHHHccccccccccccccccHHHHcccccccccccEEEcccccccccccccccccccEEEcccccccccccccccHHHcccHHHcccHHHccEEEcccHHHHHHHcccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHccccHHHHHHHccccHHHHccccEEEEEEEEccccccccccccc //