Caenorhabditis elegans (nematode) (cele0)
Gene : ZC302.1
DDBJ : ATPase epsilon chain
Swiss-Prot:MRE11_CAEEL RecName: Full=Double-strand break repair protein mre-11;
Homologs Archaea 0/68 : Bacteria 0/915 : Eukaryota 189/199 : Viruses 0/175 --->[See Alignment]
d.159.1
:728 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 66->206 1ii7B PDBj 1e-09 38.3 %
:RPS:PDB 66->340 2dxnA PDBj 5e-17 13.4 %
:RPS:SCOP 66->439 1ii7A d.159.1.4 * 3e-20 15.5 %
:HMM:SCOP 66->429 1ii7A_ d.159.1.4 * 5.1e-49 29.1 %
:RPS:PFM 321->532 PF04152 * Mre11_DNA_bind 1e-29 42.5 %
:HMM:PFM 312->533 PF04152 * Mre11_DNA_bind 1.8e-79 45.3 212/217
:HMM:PFM 66->305 PF00149 * Metallophos 7e-27 21.5 191/200
:BLT:SWISS 1->728 MRE11_CAEEL 0.0 100.0 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAA98292.2
GT:GENE ZC302.1
GT:PRODUCT ATPase epsilon chain
GT:ORG cele0
GT:DATABASE WS208
WP:CE CE37459
WP:PRODUCT ATPase epsilon chain
WP:LOCUS WBGene00003405
GB:PROTEIN_ID CAA98292.2
LENGTH 728
SQ:AASEQ MCGSDDSFDDFVPDSQEPASSRTRNQDHLDDDEVPCSQRPDAANDTMVEDLDEGDEPAHDESEDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNHDDLSGKGLTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPNAGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDLLIWGHEHECKPDPQYVASSEAVGDGFYILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLDKIPPGSRPILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAKRRPRQPELPLIRLKVIYDGDWLNITPANAKRIGLRYENVVANAVDMVFIKKNNKPKEGKLQTENEKNITEMADEMGQVSATNLQTIINDYFINQPLVDQMTVLKPIGIGRALEQYSAIEEGGLATSANRNFDSCLMHQIDVVRKTLKKMPLPPINDPSDLDKFRDLITKDLYDMKKADSERFKNPVADVEMEEDEDDPQYYMPPQSTSRTNYASGSEDEVANSDEEMGSSISRHSKQPTTRGRGRGARGAGASRETTRGRSNKVVSTRQIDSDGFEIINDSPSPPPASRSTRGKARGKSAPSKKRDLSFF
SW:ID MRE11_CAEEL
SW:DE RecName: Full=Double-strand break repair protein mre-11;
SW:GN Name=mre-11; ORFNames=ZC302.1;
SW:KW Complete proteome; DNA damage; DNA repair; Endonuclease; Exonuclease;Hydrolase; Manganese; Meiosis; Nuclease; Nucleus.
SW:EXACT T
SW:FUNC +
BL:SWS:NREP 1
BL:SWS:REP 1->728|MRE11_CAEEL|0.0|100.0|728/728|
GO:SWS:NREP 8
GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage|
GO:SWS GO:0006281|"GO:DNA repair"|DNA repair|
GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease|
GO:SWS GO:0004527|"GO:exonuclease activity"|Exonuclease|
GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase|
GO:SWS GO:0007126|"GO:meiosis"|Meiosis|
GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease|
GO:SWS GO:0005634|"GO:nucleus"|Nucleus|
SEG 4->11|sddsfddf|
SEG 606->615|dvemeededd|
SEG 657->678|ttrgrgrgargagasrettrgr|
SEG 699->708|spspppasrs|
BL:PDB:NREP 1
BL:PDB:REP 66->206|1ii7B|1e-09|38.3|107/332|
RP:PDB:NREP 1
RP:PDB:REP 66->340|2dxnA|5e-17|13.4|224/271|
RP:PFM:NREP 1
RP:PFM:REP 321->532|PF04152|1e-29|42.5|193/213|Mre11_DNA_bind|
HM:PFM:NREP 2
HM:PFM:REP 312->533|PF04152|1.8e-79|45.3|212/217|Mre11_DNA_bind|
HM:PFM:REP 66->305|PF00149|7e-27|21.5|191/200|Metallophos|
GO:PFM:NREP 4
GO:PFM GO:0004519|"GO:endonuclease activity"|PF04152|IPR007281|
GO:PFM GO:0005634|"GO:nucleus"|PF04152|IPR007281|
GO:PFM GO:0006302|"GO:double-strand break repair"|PF04152|IPR007281|
GO:PFM GO:0030145|"GO:manganese ion binding"|PF04152|IPR007281|
RP:SCP:NREP 1
RP:SCP:REP 66->439|1ii7A|3e-20|15.5|328/333|d.159.1.4|
HM:SCP:REP 66->429|1ii7A_|5.1e-49|29.1|309/333|d.159.1.4|1/1|Metallo-dependent phosphatases|
OP:NHOMO 230
OP:NHOMOORG 189
OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -111111-311-1111111111111111111111111111111111-111111111111111111111111111111-1111111111-1211111111111111111112111212111111124121462-2-31-1121111111111112121113411211-11221111111171111111111111111111 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 383
STR:RPRED 52.6
SQ:SECSTR ####################################TTccEEEEEEEcccccccccccccccccccEEEEEcccccccTTcccTTTccHHHHHHHHHHTTccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTccccEEEcccTTccHHHHHHHHHGGGcGGGcccTTcccEEEcccccEEEEcccccTTcccccccHHHHHHHHHHHHTTTTccEEEEEcccccccccTTTcTTccTTTHHccccHHHHHHHcTTEEEEEEccccccEEEccEEETTEEETTEEEEEcccccccccccccccEEEEccccEEEEEccccEEEEEETTEEEEEEEEEEEEcHHHHHHHHHHHccTTcEEEEEEEEccccccHHHHHHccccE#####################################################################################################################################################################################################################################################################################################################
DISOP:02AL 1-5, 15-31, 52-61, 418-420, 470-485, 591-636, 643-724|
PSIPRED cccccccHHHHccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccEEEEEEccccccccccccHHHHHHHcccEEEccccccccEEEEEEEEEEEccEEEEEEEccccccHHHHHHHHHcccEEEcccccccccEEEEEEEcccccccccccccccccHHHHcccccEEEEEEEEEccccccccccccccccccEEEcccccEEcccccccccccEEEEEEEEccEEEEEEEcccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccEEEccHHHHHHHHccccccHHHEEEEEEcccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHcEEcccccccccccccccccccccccHHHHHccccc
//
[GTOP]
