[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Caenorhabditis elegans (nematode) (cele0)
Gene : ZC302.1
DDBJ      :             ATPase epsilon chain
Swiss-Prot:MRE11_CAEEL  RecName: Full=Double-strand break repair protein mre-11;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
d.159.1
:728 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   66->206 1ii7B PDBj 1e-09 38.3 %
:RPS:PDB   66->340 2dxnA PDBj 5e-17 13.4 %
:RPS:SCOP  66->439 1ii7A  d.159.1.4 * 3e-20 15.5 %
:HMM:SCOP  66->429 1ii7A_ d.159.1.4 * 5.1e-49 29.1 %
:RPS:PFM   321->532 PF04152 * Mre11_DNA_bind 1e-29 42.5 %
:HMM:PFM   312->533 PF04152 * Mre11_DNA_bind 1.8e-79 45.3 212/217  
:HMM:PFM   66->305 PF00149 * Metallophos 7e-27 21.5 191/200  
:BLT:SWISS 1->728 MRE11_CAEEL 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAA98292.2 GT:GENE ZC302.1 GT:PRODUCT ATPase epsilon chain GT:ORG cele0 GT:DATABASE WS208 WP:CE CE37459 WP:PRODUCT ATPase epsilon chain WP:LOCUS WBGene00003405 GB:PROTEIN_ID CAA98292.2 LENGTH 728 SQ:AASEQ MCGSDDSFDDFVPDSQEPASSRTRNQDHLDDDEVPCSQRPDAANDTMVEDLDEGDEPAHDESEDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNHDDLSGKGLTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPNAGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDLLIWGHEHECKPDPQYVASSEAVGDGFYILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLDKIPPGSRPILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAKRRPRQPELPLIRLKVIYDGDWLNITPANAKRIGLRYENVVANAVDMVFIKKNNKPKEGKLQTENEKNITEMADEMGQVSATNLQTIINDYFINQPLVDQMTVLKPIGIGRALEQYSAIEEGGLATSANRNFDSCLMHQIDVVRKTLKKMPLPPINDPSDLDKFRDLITKDLYDMKKADSERFKNPVADVEMEEDEDDPQYYMPPQSTSRTNYASGSEDEVANSDEEMGSSISRHSKQPTTRGRGRGARGAGASRETTRGRSNKVVSTRQIDSDGFEIINDSPSPPPASRSTRGKARGKSAPSKKRDLSFF SW:ID MRE11_CAEEL SW:DE RecName: Full=Double-strand break repair protein mre-11; SW:GN Name=mre-11; ORFNames=ZC302.1; SW:KW Complete proteome; DNA damage; DNA repair; Endonuclease; Exonuclease;Hydrolase; Manganese; Meiosis; Nuclease; Nucleus. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->728|MRE11_CAEEL|0.0|100.0|728/728| GO:SWS:NREP 8 GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease| GO:SWS GO:0004527|"GO:exonuclease activity"|Exonuclease| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0007126|"GO:meiosis"|Meiosis| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| GO:SWS GO:0005634|"GO:nucleus"|Nucleus| SEG 4->11|sddsfddf| SEG 606->615|dvemeededd| SEG 657->678|ttrgrgrgargagasrettrgr| SEG 699->708|spspppasrs| BL:PDB:NREP 1 BL:PDB:REP 66->206|1ii7B|1e-09|38.3|107/332| RP:PDB:NREP 1 RP:PDB:REP 66->340|2dxnA|5e-17|13.4|224/271| RP:PFM:NREP 1 RP:PFM:REP 321->532|PF04152|1e-29|42.5|193/213|Mre11_DNA_bind| HM:PFM:NREP 2 HM:PFM:REP 312->533|PF04152|1.8e-79|45.3|212/217|Mre11_DNA_bind| HM:PFM:REP 66->305|PF00149|7e-27|21.5|191/200|Metallophos| GO:PFM:NREP 4 GO:PFM GO:0004519|"GO:endonuclease activity"|PF04152|IPR007281| GO:PFM GO:0005634|"GO:nucleus"|PF04152|IPR007281| GO:PFM GO:0006302|"GO:double-strand break repair"|PF04152|IPR007281| GO:PFM GO:0030145|"GO:manganese ion binding"|PF04152|IPR007281| RP:SCP:NREP 1 RP:SCP:REP 66->439|1ii7A|3e-20|15.5|328/333|d.159.1.4| HM:SCP:REP 66->429|1ii7A_|5.1e-49|29.1|309/333|d.159.1.4|1/1|Metallo-dependent phosphatases| OP:NHOMO 230 OP:NHOMOORG 189 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -111111-311-1111111111111111111111111111111111-111111111111111111111111111111-1111111111-1211111111111111111112111212111111124121462-2-31-1121111111111112121113411211-11221111111171111111111111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 383 STR:RPRED 52.6 SQ:SECSTR ####################################TTccEEEEEEEcccccccccccccccccccEEEEEcccccccTTcccTTTccHHHHHHHHHHTTccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTccccEEEcccTTccHHHHHHHHHGGGcGGGcccTTcccEEEcccccEEEEcccccTTcccccccHHHHHHHHHHHHTTTTccEEEEEcccccccccTTTcTTccTTTHHccccHHHHHHHcTTEEEEEEccccccEEEccEEETTEEETTEEEEEcccccccccccccccEEEEccccEEEEEccccEEEEEETTEEEEEEEEEEEEcHHHHHHHHHHHccTTcEEEEEEEEccccccHHHHHHccccE##################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-5, 15-31, 52-61, 418-420, 470-485, 591-636, 643-724| PSIPRED cccccccHHHHccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccEEEEEEccccccccccccHHHHHHHcccEEEccccccccEEEEEEEEEEEccEEEEEEEccccccHHHHHHHHHcccEEEcccccccccEEEEEEEcccccccccccccccccHHHHcccccEEEEEEEEEccccccccccccccccccEEEcccccEEcccccccccccEEEEEEEEccEEEEEEEcccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccEEEccHHHHHHHHccccccHHHEEEEEEcccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHcEEcccccccccccccccccccccccHHHHHccccc //