[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Caenorhabditis elegans (nematode) (cele0)
Gene : ZK863.3
DDBJ      :             7 transmembrane receptor (rhodopsin family)
Swiss-Prot:ELP3_CAEEL   RecName: Full=Probable elongator complex protein 3;         EC=2.3.1.48;

Homologs  Archaea  60/68 : Bacteria  178/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
a.69.1c.1.28d.108.1
:547 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   72->271 3dfuB PDBj 1e-26 13.8 %
:RPS:PDB   290->537 1bobA PDBj 1e-17 11.8 %
:RPS:SCOP  289->389 1bmfA1  a.69.1.1 * 2e-18 21.8 %
:RPS:SCOP  485->538 1y9wA1  d.108.1.1 * 9e-10 37.7 %
:HMM:SCOP  95->354 1oltA_ c.1.28.2 * 3.5e-25 29.3 %
:HMM:SCOP  349->541 1p0hA_ d.108.1.1 * 3.5e-12 19.5 %
:RPS:PFM   139->300 PF04055 * Radical_SAM 4e-13 35.5 %
:HMM:PFM   103->286 PF04055 * Radical_SAM 3.4e-19 19.7 142/166  
:HMM:PFM   438->532 PF00583 * Acetyltransf_1 3.9e-18 30.4 79/83  
:BLT:SWISS 1->547 ELP3_CAEEL 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD WormBase Abbreviations Back to title page
GT:ID CAB01454.2 GT:GENE ZK863.3 GT:PRODUCT 7 transmembrane receptor (rhodopsin family) GT:ORG cele0 GT:DATABASE WS208 WP:CE CE40344 WP:PRODUCT 7 transmembrane receptor (rhodopsin family) WP:LOCUS WBGene00014123 GB:PROTEIN_ID CAB01454.2 LENGTH 547 SQ:AASEQ MDQKGSQRALLAQTINEIVKLLIEAHNQKKDVNLNRLKCIVAQKNGLSFQPKLVDIIAGVPSDYKDSLLPKLKAKPVRTASGIAVVAVMSKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRGRLNQLMQLGHSVDKVEFIVMGGTFMSLPEDYRDFFIRNLHDALSGHTSASVEEAVAYSERSKMKCIGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAKDTGYKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKTGRYQSYPPSVLVDLIATILSLVPPWTRVYRVQRDIPMPLVSSGVEHGNLREHAMAKMKELGLKCRDVRTREVGIQEIHNKVRPEDVELIRRDYTANGGWETFISYEDPKQDILIGLLRLRKISDKAHRPELKGNVSVVRELHVYGSVVSVADRDPKKFQHQGYGSLLMEEAERIAREEHGSDKIAVISGVGTREYYRKLGYELDGPYMSKMLDSAAA SW:ID ELP3_CAEEL SW:DE RecName: Full=Probable elongator complex protein 3; EC=2.3.1.48; SW:GN Name=elpc-3; ORFNames=ZK863.3; SW:KW Acyltransferase; Complete proteome; Iron; Iron-sulfur; Metal-binding;Nucleus; S-adenosyl-L-methionine; Transcription;Transcription regulation; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->547|ELP3_CAEEL|0.0|100.0|547/547| GO:SWS:NREP 7 GO:SWS GO:0008415|"GO:acyltransferase activity"|Acyltransferase| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0005634|"GO:nucleus"|Nucleus| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| RP:PDB:NREP 2 RP:PDB:REP 72->271|3dfuB|1e-26|13.8|195/222| RP:PDB:REP 290->537|1bobA|1e-17|11.8|237/306| RP:PFM:NREP 1 RP:PFM:REP 139->300|PF04055|4e-13|35.5|138/164|Radical_SAM| HM:PFM:NREP 2 HM:PFM:REP 103->286|PF04055|3.4e-19|19.7|142/166|Radical_SAM| HM:PFM:REP 438->532|PF00583|3.9e-18|30.4|79/83|Acetyltransf_1| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 2 RP:SCP:REP 289->389|1bmfA1|2e-18|21.8|101/131|a.69.1.1| RP:SCP:REP 485->538|1y9wA1|9e-10|37.7|53/140|d.108.1.1| HM:SCP:REP 95->354|1oltA_|3.5e-25|29.3|215/0|c.1.28.2|1/1|Radical SAM enzymes| HM:SCP:REP 349->541|1p0hA_|3.5e-12|19.5|164/0|d.108.1.1|1/1|Acyl-CoA N-acyltransferases (Nat)| OP:NHOMO 503 OP:NHOMOORG 431 OP:PATTERN --1-1--111111111-11111-111111111111222112121111111111111111111111-11 ------------------------------------------------------------------------------11-1-1---------------------------------------------------------111-------------------------------------------------1--------------------1----------111111----------------------------------------------1---------------------------------------------1112111111111111211-222-11-----1111---1----111111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------2111-1121111-11-1-21121------111-----------1---------------11---------1111--1111111--1-1---------------1111-1111111111-111111111111111111111111--1111111111111111111111111--1------1-----------------------------------------------------------------------------1111111111111------------------------------------------------------------1111111111--- 1111111-52211111111111111111111111111111111111111111111112111111111111111111111111111111-111111111111211121121211111-1111111111112C1-21211111-1311111-1111121211222211111131121111181111111121181132221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 476 STR:RPRED 87.0 SQ:SECSTR #######################################################################HHHHHTTcEEEEcccGEEEEcccHHHHHHHHGccccGGccTTcEEEccccccGGGHHHHHTTcEEEEEEEETTEEEEEEccHHHHHHHHHHHHHTTcEEccccGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHTcHHHEHHHHHcccTcccccGGGcEEGGGEEEcccEEEEcccccHHHHTTTTEEccEEEEEEETTTccEEEEEEcEEcccTTcccHHHHHHTTccTTccEEHHccHHHHHHHHHHHHHHccTTTTcEEEEEEEETTEEEEEEccTHHHHHHEEccccHHHHHHHHHHTHHHHHHcTTcccccTTcTTEEEEEEEETTTccEEEEEEEEEEcccccccEEEEEEEEEcGGGccccHHHHHHHHHHHHHHHcTEEEEEEccccHHHHHHHHHHHHHHHHHTccccccGGGc DISOP:02AL 1-10,545-548| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccHHHHcccHHHHHHHHHHHHcccEEEEcccEEEEEEccccccccccccccccccccccccccccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHccccEEEEccccccHHHHHHHcccccHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHccccccccHHHHHHHHHHHHHHccHHHEEEEEcccccccEEccccccHHHHHHHHHHHHHccccccEEHHHHHccHHHHcccccccEEEEEEEEEccccEEEEEEEEcccccEEEcccccccccccccccccccccEEEEEEEEEccccccccccccccHHccHHHHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHcccEEEccEEEEEcccccc //