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DDBJ      :CPE1487      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  83/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]

c.94.1

:334 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   39->324 3hn0B PDBj 2e-22 30.7 %
:RPS:PDB   39->273 1dtzA PDBj 2e-14 9.6 %
:RPS:SCOP  72->331 2nxoA1  c.94.1.1 * 1e-20 17.3 %
:HMM:SCOP  37->270 1xs5A_ c.94.1.1 * 6.6e-25 25.2 %
:RPS:PFM   74->275 PF02621 * DUF178 2e-13 31.4 %
:HMM:PFM   66->269 PF09084 * NMT1 6e-14 24.4 193/216  
:HMM:PFM   1->26 PF08085 * Entericidin 0.0005 50.0 22/42  
:HMM:PFM   238->312 PF01540 * Lipoprotein_7 0.001 21.3 75/353  
:BLT:SWISS 66->291 YTLA_BACSU 9e-12 25.8 %
:TM
:SEG

SeqInfo   AminoSeq     See neighboring genes

Links GIB  DAD                                            Abbreviations  Back to title page

GT:ID          BAB81193.1
GT:GENE        CPE1487
GT:PRODUCT     conserved hypothetical protein
GT:DATABASE    GIB00075CH01
GT:ORG         cper0
GB:ACCESSION   GIB00075CH01
GB:LOCATION    complement(1741419..1742423)
GB:FROM        1741419
GB:TO          1742423
GB:DIRECTION   -
GB:GENE        CPE1487
GB:PRODUCT     conserved hypothetical protein
GB:NOTE        334 aa, similar to pir:D72405 hypothetical protein from Thermotoga maritima (strain MSB8) (300 aa); 29.7% identity in 266 aa overlap
GB:PROTEIN_ID  BAB81193.1
LENGTH         334
SQ:AASEQ       MKKLNKFLSLVLMVLFSLSILVGCNTSKKEEAKAPEEKTSIEIVVPDGLPAISIVKMIKEKPEIMKGLDINYSIVKGSDALVSKVLKGEGDICIVPSNVAAIAYNKEAKYKLAGTVGFGSLYVISSDDSVNSLEDLKGKDVYNVGQGLTPDLIFKILLQNDGINPEKDLTLSYVNAASELAPLFIEGKAKYAVVPEPMLTQIMTKKPETKIVASLNEQWKEMSDSKMGYPQSSVIVKEDLAKNNSEAVQKILKEIDNSTKWANENKEEAGAFAEEVGITGKKEIIAKSLERANLNYVSALDSESEYIKYYDKIYSLEPKAIGGKKVNEEIFLQK
GT:EXON        1|1-334:0|
BL:SWS:NREP    1
BL:SWS:REP     66->291|YTLA_BACSU|9e-12|25.8|217/334|
TM:NTM         1
TM:REGION      4->24|
SEG            8->22|lslvlmvlfslsilv|
SEG            28->38|kkeeakapeek|
BL:PDB:NREP    1
BL:PDB:REP     39->324|3hn0B|2e-22|30.7|264/277|
RP:PDB:NREP    1
RP:PDB:REP     39->273|1dtzA|2e-14|9.6|219/689|
RP:PFM:NREP    1
RP:PFM:REP     74->275|PF02621|2e-13|31.4|185/253|DUF178|
HM:PFM:NREP    3
HM:PFM:REP     66->269|PF09084|6e-14|24.4|193/216|NMT1|
HM:PFM:REP     1->26|PF08085|0.0005|50.0|22/42|Entericidin|
HM:PFM:REP     238->312|PF01540|0.001|21.3|75/353|Lipoprotein_7|
RP:SCP:NREP    1
RP:SCP:REP     72->331|2nxoA1|1e-20|17.3|237/272|c.94.1.1|
HM:SCP:REP     37->270|1xs5A_|6.6e-25|25.2|222/0|c.94.1.1|1/1|Periplasmic binding protein-like II|
OP:NHOMO       98
OP:NHOMOORG    83
OP:PATTERN     -------------------------------------------------------------------- -----------------------------------------------------1---1--------------------11-------------1----------------------------------------------------------------------------------------------11---111111--1-111--1--11-111---------------1-------------------------------------------------------------------------------------------21112221222121-111111121---12---22-1-1---1---------------------------21--2-------------------------------------1---2------------------------------------------------------------------------------------------------------1---------------11-----1--1------------1-----------1---------1-1-----------------11-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1---------------------------1111111111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED      293
STR:RPRED      87.7
SQ:SECSTR      ######################################ccEEEEEccHHHHHHHHHHHHHHHTTTccccEEEEEcccHHHHHHHHHTTccccEEEcHHHHHHHHcTTTcEEEEEEEccEEEEEEEEccccccGGGcTTcEEEccTTcTTTTHHHHHHTGGGTccccTTccHHHHHHHGGHHHHHccEEEcTTccTTTcHHHHTTccccGGGTTccTHHHHHHHcTTcTTcHHHHHHHHHHccccHcEEEEETTHHHHHcccHHHHTTEEEEETHHHcTTccHHHHHHHHHHHccHHHHccHHHHcHHHHHHHHHHHHHHHcTTccTTccTT###
DISOP:02AL     1-3, 26-36|
PSIPRED        ccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHcccEEEEEEcHHHHHHHHHccccEEEEEEccccEEEEEEcccccccHHHHcccEEEEEccccHHHHHHHHHHHHccccHHHcEEEEEEccHHHHHHHHHHccEEEEEEccHHHHHHHHHcccEEEEEEcHHHHHHHccccccccEEEEEEEHHHHHHcHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHccc
//