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Halobacterium sp. NRC-1 (halo0)
Gene : AAG18968.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  174/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:165 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->158 2qipA PDBj 1e-25 35.3 %
:RPS:PDB   34->159 2bcnA PDBj 8e-05 11.1 %
:RPS:PFM   10->151 PF01936 * DUF88 4e-19 42.6 %
:HMM:PFM   9->156 PF01936 * DUF88 7.5e-39 44.8 143/146  
:BLT:SWISS 9->158 Y482_METJA 7e-08 32.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG18968.1 GT:GENE AAG18968.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00041CH01 GT:ORG halo0 GB:ACCESSION GIB00041CH01 GB:LOCATION 325698..326195 GB:FROM 325698 GB:TO 326195 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:NOTE Vng0419c GB:PROTEIN_ID AAG18968.1 GB:DB_XREF GI:10580028 LENGTH 165 SQ:AASEQ MPPLQPAQRVAVLADSQNLYHSAQSVYSQNIDYAALLDKGVQDRELTRAIAYVIRAQSEDEDRFFDALRDIGFETKIKAIKTFGDGSKKADWDVGMSLDAVSLADHIDTIVLCTGDGDFSRLCRHLRHEGVRVEVMAFEESAATELVDAADSFVDLSERTETFLL GT:EXON 1|1-165:0| BL:SWS:NREP 1 BL:SWS:REP 9->158|Y482_METJA|7e-08|32.6|132/100| BL:PDB:NREP 1 BL:PDB:REP 8->158|2qipA|1e-25|35.3|150/160| RP:PDB:NREP 1 RP:PDB:REP 34->159|2bcnA|8e-05|11.1|117/294| RP:PFM:NREP 1 RP:PFM:REP 10->151|PF01936|4e-19|42.6|136/143|DUF88| HM:PFM:NREP 1 HM:PFM:REP 9->156|PF01936|7.5e-39|44.8|143/146|DUF88| OP:NHOMO 216 OP:NHOMOORG 182 OP:PATTERN ------------------------11111111------------------------------------ ----------------------------------------------------------------------------------22221----------------------------------------------------------122242222322------22223332------------22211---1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----11211111111111111111-111-11112111111-1111111111111111-111111111111111111111--111---------------------------------------------1----------------------------------------------------------------1----------------------------------------------------11--11--1-1111111111111111111111----1---------------------------------------------------------------------------------------------------------1111---------------------------11111111111111111----------11111111111111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 152 STR:RPRED 92.1 SQ:SECSTR #######EEEEEEEEHHHHHHHHHHHHcccccHHHHHTTTccHHHHHHHHGGGGccEEcHHHHcccEEccccTTEEEccccHHHHHHHHccEEEEEcTTccEEEEETcEEEEcTccEEcHHHHHHHHcHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHT###### DISOP:02AL 1-5| PSIPRED cccccccccEEEEEEHHHHHHHHHHHccccccHHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHcccEEEEEEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHccEEcccccccccc //