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Halobacterium sp. NRC-1 (halo0)
Gene : AAG19039.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.80.1b.81.1
:290 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  200->263 1rwrA  b.80.1.11 * 3e-04 29.7 %
:HMM:SCOP  33->272 2jf2A1 b.81.1.1 * 2e-11 24.3 %
:HMM:PFM   58->100 PF04519 * DUF583 0.00015 34.1 41/95  
:HMM:PFM   191->276 PF04519 * DUF583 8.5e-11 24.7 81/95  
:BLT:SWISS 17->99 LPXD_CHRVO 6e-05 30.9 %
:BLT:SWISS 174->258 LPXD_PELCD 3e-04 34.5 %
:REPEAT 2|7->94|195->282
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG19039.1 GT:GENE AAG19039.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00041CH01 GT:ORG halo0 GB:ACCESSION GIB00041CH01 GB:LOCATION complement(392861..393733) GB:FROM 392861 GB:TO 393733 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE Vng0507c GB:PROTEIN_ID AAG19039.1 GB:DB_XREF GI:10580111 LENGTH 290 SQ:AASEQ MPMRRLDCGVLGPTPIDQLHIPDGTTVKEHDVVADSDVLIGAQSQLRLGVRGHNVVAGERVSVDGDIEAAGDCRLDMWCEVTGNVLVEGDAYVGERTHITERLVVGGDLDIGDDVDIEEGFEASGWIVIRNPMPTLTFFVMYLTHLLRLGEAEDAQELVEELAADSDRGPLTIPQSASVSDDAWRVSTPATIGDDCRLHGNIRATEIDVGRGNNVFGSLRAQNDVTVGAGTKIHGDVTTRNGSVHVQGDAVVLGDVSGHDVTIDEAADVDGVIRARGEMRVGSVADRDAE GT:EXON 1|1-290:0| BL:SWS:NREP 2 BL:SWS:REP 17->99|LPXD_CHRVO|6e-05|30.9|81/348| BL:SWS:REP 174->258|LPXD_PELCD|3e-04|34.5|84/343| NREPEAT 1 REPEAT 2|7->94|195->282| SEG 103->120|lvvggdldigddvdieeg| HM:PFM:NREP 2 HM:PFM:REP 58->100|PF04519|0.00015|34.1|41/95|DUF583| HM:PFM:REP 191->276|PF04519|8.5e-11|24.7|81/95|DUF583| RP:SCP:NREP 1 RP:SCP:REP 200->263|1rwrA|3e-04|29.7|64/297|b.80.1.11| HM:SCP:REP 33->272|2jf2A1|2e-11|24.3|185/0|b.81.1.1|1/1|Trimeric LpxA-like enzymes| OP:NHOMO 17 OP:NHOMOORG 17 OP:PATTERN -----------------------111111111-----------1111--1111--------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 287-290| PSIPRED ccccEEEccEEccccccEEEEcccccEEEEEEEEcccEEEccccEEEEEEcccEEEEcccEEEccEEEEccccEEccccEEEcEEEEccccEEEEEEEEccEEEEEEEEEEccEEEEcccEEEEEEEEEccccEEEEEHHHHHHHHHHcccHHHHHHHHHHHHcccccccEEEccccEEEcccEEEcccEEEcccEEEEEEEEEccEEccccEEEEEEEEccccEEEccccEEEccEEEEccEEEEcccEEEEcccccEEEEcccccEEEEEEEcccEEEEEEEHHHHcc //