[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Halobacterium sp. NRC-1 (halo0)
Gene : aspB1
DDBJ      :aspB1        aspartate aminotransferase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  853/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:373 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->365 1gd9A PDBj 7e-61 37.8 %
:RPS:PDB   14->368 2douB PDBj 2e-51 26.0 %
:RPS:SCOP  55->321 1fg3A  c.67.1.1 * 2e-43 23.3 %
:HMM:SCOP  1->368 1iayA_ c.67.1.4 * 8.4e-111 36.5 %
:RPS:PFM   35->365 PF00155 * Aminotran_1_2 1e-35 34.5 %
:HMM:PFM   26->363 PF00155 * Aminotran_1_2 1.3e-59 25.7 334/363  
:BLT:SWISS 5->366 AAT1_METJA 3e-65 38.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG19034.1 GT:GENE aspB1 GT:PRODUCT aspartate aminotransferase GT:DATABASE GIB00041CH01 GT:ORG halo0 GB:ACCESSION GIB00041CH01 GB:LOCATION 388169..389290 GB:FROM 388169 GB:TO 389290 GB:DIRECTION + GB:GENE aspB1 GB:PRODUCT aspartate aminotransferase GB:NOTE AspB1 GB:PROTEIN_ID AAG19034.1 GB:DB_XREF GI:10580106 GB:GENE:GENE aspB1 LENGTH 373 SQ:AASEQ MTEFSDRVAQVSISGIRAVFEAAGEDAINLGLGQPDFPTPDHARQAAVDAIESGAADGYTSNRGTAALVDAIVEKHARDQGVDVAPAGVIATAGGSEALHLAMEAHVDPGDEVLFPDPGFVSYDALTRMAGGNPVGLPLRDDLTLAPETVEDHITDDTAAFVVNSPANPTGAVQSPADMRAFARIADEHDVLCISDEVYEHIVFEGEHRSPMEFADTDNVVVVNACSKTYSMTGWRLGWVAASERRAERMLRVHQYVQACASAPAQYAAEAALSGPQGVVDEMVAAFEARRDVLLDGLEAMGLDVPTPGGAFYAMPTVPDGWIDEVVDRGVVVVPGSAFGDHGAGTARISYATDMATLRDAIDVMRAATAAVQ GT:EXON 1|1-373:0| BL:SWS:NREP 1 BL:SWS:REP 5->366|AAT1_METJA|3e-65|38.5|358/375| SEG 259->272|acasapaqyaaeaa| SEG 326->334|vvdrgvvvv| BL:PDB:NREP 1 BL:PDB:REP 5->365|1gd9A|7e-61|37.8|360/388| RP:PDB:NREP 1 RP:PDB:REP 14->368|2douB|2e-51|26.0|354/368| RP:PFM:NREP 1 RP:PFM:REP 35->365|PF00155|1e-35|34.5|328/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 26->363|PF00155|1.3e-59|25.7|334/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 1 RP:SCP:REP 55->321|1fg3A|2e-43|23.3|258/355|c.67.1.1| HM:SCP:REP 1->368|1iayA_|8.4e-111|36.5|364/428|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 5018 OP:NHOMOORG 1109 OP:PATTERN 33323324333333325624232574466575322444444357645646777-44466673336-23 58A4954745526457644-45225544444556666888556566555662BBB7661156448786776577776621463445444464351111232534654534-111111--------4545443432574454445455444444443322223235347676131111141111234232228587787898A69988893755487995666544555565DA333333333333332222234243553A131A988662527A54443333233354333333333332222222222222343555444448574999999949427665333336-23535465365315564454322743455411111439686656566555555555458-78888B788F41977A88B8777887453588778797B5555555575545867211111111111111111111111111113257346EB69FACDAEB5666CCDE656778FCBCBAB12AAD77976B887D6566676537221212144548519844668397777-64652353457467639321222222222222222224343333322482223221322211111221112212---5545------76773795555555556-5565555545545555555797763335555455555555555734544451-555565466666--1111111333357757222214-22221113555553522472AA9ABEBDAAA997879433324323511232222223442334545533412222273223333----------------------------1-------4444334333373 ----225-421134322223552525512121132324444443221236325321223222445222331151322-1225443411-17322232223411333-25433636451332333C4162BH4-5362333513932333233243333622233432522544366546n4443798BO2C456B8A89 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 373 STR:RPRED 100.0 SQ:SECSTR cccccHHHHTccHccHHHHHHHHTcccEEcccccccccccHHHHHHHHHHHTcGGGcccccHHHHHHHHHHHHHHHHHHHcccccTTcEEEEccHHHHHHHHHHHTccTTcEEEEEccccHHHHHHHHHTTcEEEEEcccTTccccGGGccHHHHHHEEEEEEccccTTTcccccHHHHHHHHHHHHHHTcEEEEEcTTTTcccccccccGGGcTTGGTEEEEEEHHHHHTcGGGccEEEEEcHHHHHHHHHHHHTTcccccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHTTTTTcEEccccccccEEEEEcccccHHHHHHTTEEcEEGGGGcGGGTTEEEEEccccHHHHHHHHHHHHHTcTTcc DISOP:02AL 372-374| PSIPRED ccHHHHHHHcccccHHHHHHHHcccccEEcccccccccccHHHHHHHHHHHHccHHcccccccccHHHHHHHHHHHHHHHcccccHHHEEEEccHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHcccEEEEEEccccccccHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHcccEEEEEccccccccccccccEEEccccccEEEEEccHHHHcccHHHHEEEEccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccEEEEEEEccHHHHHHHHHcccEEEcccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHcc //