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Halobacterium sp. NRC-1 (halo0)
Gene : crtI2
DDBJ      :crtI2        phytoene dehydrogenase
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  150/915 : Eukaryota  41/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:536 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   52->510 3cntB PDBj 4e-27 11.1 %
:RPS:SCOP  52->81 2dw4A2  c.3.1.2 * 4e-07 40.0 %
:RPS:SCOP  128->380 1sezA1  c.3.1.2 * 3e-17 11.2 %
:HMM:SCOP  19->515 1sezA1 c.3.1.2 * 9e-41 27.6 %
:RPS:PFM   52->79 PF01593 * Amino_oxidase 7e-05 57.1 %
:RPS:PFM   235->296 PF01266 * DAO 2e-05 45.2 %
:HMM:PFM   227->503 PF01266 * DAO 2.3e-10 26.6 207/358  
:HMM:PFM   37->309 PF01593 * Amino_oxidase 2.5e-17 17.6 261/449  
:BLT:SWISS 52->520 CRTJ_MYXXA 2e-54 30.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG19982.1 GT:GENE crtI2 GT:PRODUCT phytoene dehydrogenase GT:DATABASE GIB00041CH01 GT:ORG halo0 GB:ACCESSION GIB00041CH01 GB:LOCATION complement(1294848..1296458) GB:FROM 1294848 GB:TO 1296458 GB:DIRECTION - GB:GENE crtI2 GB:PRODUCT phytoene dehydrogenase GB:NOTE CrtI2 GB:PROTEIN_ID AAG19982.1 GB:DB_XREF GI:10581209 GB:GENE:GENE crtI2 LENGTH 536 SQ:AASEQ MPHQSQPGFLLPAIQHHSMQGSLPGERDVTVVGGGFGGLAAAAYLARAGASVTLLEQHDTVGGRAGVLERDGFRFDTGPSWYLMPDVFERFFDHFDHDPHDFYELTRLDPQYRVFWTDGDSATIEPNRRNAHELFESYEEGAGDALATYLDRAATNYDLAMNRVVYPDRTAFRDYASTDMLPLASRLRLFGNMDDYVSRFFDHPKLRQLLEYTLVFLGGAPHNTPALYSIMSHVDLNGNVFYPEGGIAGVVDALAELAVEQGATIETGVGVNAISGRRGEFTLATDDGTRTTDLVVNNANPAYAERELLDTGGRDHAPDYWDDQTYAPSALMFYLGVEGDVEPLAHHSLVLPPDWDGHFAQLFDDPGWPDDPAFYLSVASKTDDTVAPDGHEAVVILLPIAPGLDDTPEIRAQYRDRLLGTLAAQTGVDLRDRIVVEESACVSEFSEQFGDPGGTALGLAHTLFQTGPLRPGKRDGPDGHYYVGAYTNPGIGMPMCLISGEHVTKAVIDDDPAASGSTDPLAVPGEFNFDTPTTAD GT:EXON 1|1-536:0| BL:SWS:NREP 1 BL:SWS:REP 52->520|CRTJ_MYXXA|2e-54|30.6|461/517| SEG 33->50|gggfgglaaaaylaraga| SEG 91->102|ffdhfdhdphdf| RP:PDB:NREP 1 RP:PDB:REP 52->510|3cntB|4e-27|11.1|425/495| RP:PFM:NREP 2 RP:PFM:REP 52->79|PF01593|7e-05|57.1|28/426|Amino_oxidase| RP:PFM:REP 235->296|PF01266|2e-05|45.2|62/354|DAO| HM:PFM:NREP 2 HM:PFM:REP 227->503|PF01266|2.3e-10|26.6|207/358|DAO| HM:PFM:REP 37->309|PF01593|2.5e-17|17.6|261/449|Amino_oxidase| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01266|IPR006076| RP:SCP:NREP 2 RP:SCP:REP 52->81|2dw4A2|4e-07|40.0|30/425|c.3.1.2| RP:SCP:REP 128->380|1sezA1|3e-17|11.2|224/353|c.3.1.2| HM:SCP:REP 19->515|1sezA1|9e-41|27.6|341/374|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 309 OP:NHOMOORG 212 OP:PATTERN ------11-111111----1----22222212--1-----------1--------------1--1--- 2--1-111221111-11----1--11------111121---222211111111--11---22--2112131---------1-1----------------1-11111-121------------------------1133333---21--------------------1-1--------------11111---13--------------------2--------244111111---22222222222222---2------------11-------11------------------------------------------------------------1-------11---------1-------21---------1-21---------2-21---12222------------33433-34-----------------1---12-11112----------------22-----------------------------111-1------------------------------------------------------------------------1---------------------------42----------------------------------------------------------------1--------1-----------------------------------------1-------------------------------------------------------------------------------------------------1----------------------1--------------------------------------1-------------------------------------- ---------------1111----111-------1-1----------11--111111---111------------------------------1------1111111---1-------------------------------------------------------------------1181111-1---1--11----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 501 STR:RPRED 93.5 SQ:SECSTR ########################cEEcEEEEcccHHHHHHHHHHHHTTcEEEEEcccccccTTccEEEcGGcEEEccccEEccTTTcHHHHHHHHHHHHHccHHHHHHccccEEcccccEEccccccEEEETTTEEcTTcTTTcHcEEEETTTEEcTTcTTTcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHGGGccHHHHHHHHHHHGGGHHHHTccTTTccHHHHTcccccccEEEcccHHHHHHHHHTccGGGccccccEEEEEEETTTEEEEEETTccEEEEEEEEEcccHHHHGGGGcccTTcTTccEETTcccccccEEEEEEEccccccccccEEEEEccccHHHHHHHHHccccccccccTTcccEEEEEHHHHHcccEEEEEEccHHHHHHTTTcHHHHHHHHHHHHHHcccccTTcccccEEEEEEEccTTTcTTTccccccccTTccTTHHHHHHTTcccccEEEccTTcccTTcHHHHHHHHHHHHHHHHHHHGccccccccccccc########### DISOP:02AL 1-3, 14-27, 511-536| PSIPRED ccccccHHHHHHHccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccEEEEEcccEEEccccEEEEcHHHHHHHHHHHcccHHHcccEEEccccEEEEcccccEEEEcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEcccEEEccEEEEEccHHHHHHHHcccccHHHHHHHHHHccccccEEEEccccccccccccccEEEEcccHHHHHHHHHHccccccccEEEEEEcccccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHcccccccccccccHHHHHHcccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc //