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Halobacterium sp. NRC-1 (halo0)
Gene : glyS
DDBJ      :glyS         glycine-tRNA synthetase
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  240/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.51.1d.104.1
:576 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->336,429->571 2zt5A PDBj 2e-68 41.9 %
:RPS:PDB   7->356,427->563 1b76A PDBj 8e-33 32.3 %
:RPS:SCOP  3->357,425->468 1atiA2  d.104.1.1 * 2e-43 33.5 %
:RPS:SCOP  462->574 1g5hA1  c.51.1.1 * 2e-17 20.4 %
:HMM:SCOP  3->478 1atiA2 d.104.1.1 * 4.1e-106 42.6 %
:HMM:SCOP  462->574 1g5hA1 c.51.1.1 * 1.4e-32 51.3 %
:RPS:PFM   38->90,159->316 PF00587 * tRNA-synt_2b 7e-16 45.1 %
:RPS:PFM   508->563 PF03129 * HGTP_anticodon 9e-11 44.6 %
:HMM:PFM   38->314 PF00587 * tRNA-synt_2b 1.8e-58 52.4 168/173  
:HMM:PFM   476->563 PF03129 * HGTP_anticodon 1.3e-24 45.5 88/94  
:BLT:SWISS 3->574 SYG_METKA e-123 43.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG20454.1 GT:GENE glyS GT:PRODUCT glycine-tRNA synthetase GT:DATABASE GIB00041CH01 GT:ORG halo0 GB:ACCESSION GIB00041CH01 GB:LOCATION 1760552..1762282 GB:FROM 1760552 GB:TO 1762282 GB:DIRECTION + GB:GENE glyS GB:PRODUCT glycine-tRNA synthetase GB:NOTE GlyS GB:PROTEIN_ID AAG20454.1 GB:DB_XREF GI:10581762 GB:GENE:GENE glyS LENGTH 576 SQ:AASEQ MSETVSELARRRGFFFQASEAYGGAAGFYTYGPEGAALKRNIEDAWRDRFVTREGNMEIDSPTVTPEPVFQASGHLDDFDDMLVECPDCGESHRADHVIEDNTDVEDAESMPTDEVEALIADHELVCPACGGPLAGQSVTGFNLMFDTTIGPGDGDPGYLRPETAQGMFTEFPRLKEYARNQLPFGVAQVGTGYRNEISPRNALLRTREFTMAELEFFVDPAGDGPALDRVADVELPLYPVDAQQAAGEEYLRLTPQEALAEGVVGGEWVAYFLARSKQWFERVGVDMDRFRFRQHLPGELAHYASDCWDAEGEVDGDWVELEGVASRTDYDLSKHDEHADDSFTVFQAYDEPKTVERASVDPEMSYLGPEFGGAAGDVADALAALAARDRAAFDGDEVTVDVDGEAYTVPTERTGFEVAEETESGRHIIPHVVEPAFGIGRAVYTALAHSYEADEVDGEPRDVLRLPAEVAPTTVGVFPLMDKDGLGERAREIAAELRAAGLAVTYDDSGNIGRRYRRQDEVGTPYCVTVDYEALEEGAVTLRDRDTTTQVRVPIAEVAETLVGLRDGELRFEAL GT:EXON 1|1-576:0| BL:SWS:NREP 1 BL:SWS:REP 3->574|SYG_METKA|e-123|43.6|557/571| SEG 21->32|ayggaagfytyg| SEG 151->158|gpgdgdpg| SEG 372->406|fggaagdvadalaalaardraafdgdevtvdvdge| SEG 486->504|glgerareiaaelraagla| BL:PDB:NREP 1 BL:PDB:REP 5->336,429->571|2zt5A|2e-68|41.9|471/530| RP:PDB:NREP 1 RP:PDB:REP 7->356,427->563|1b76A|8e-33|32.3|403/442| RP:PFM:NREP 2 RP:PFM:REP 38->90,159->316|PF00587|7e-16|45.1|165/170|tRNA-synt_2b| RP:PFM:REP 508->563|PF03129|9e-11|44.6|56/91|HGTP_anticodon| HM:PFM:NREP 2 HM:PFM:REP 38->314|PF00587|1.8e-58|52.4|168/173|tRNA-synt_2b| HM:PFM:REP 476->563|PF03129|1.3e-24|45.5|88/94|HGTP_anticodon| GO:PFM:NREP 9 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 2 RP:SCP:REP 3->357,425->468|1atiA2|2e-43|33.5|310/326|d.104.1.1| RP:SCP:REP 462->574|1g5hA1|2e-17|20.4|113/127|c.51.1.1| HM:SCP:REP 3->478|1atiA2|4.1e-106|42.6|352/394|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 462->574|1g5hA1|1.4e-32|51.3|113/127|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 571 OP:NHOMOORG 502 OP:PATTERN 11111111122112111111111111111111111111111111111111111111111111111111 ---1111111111111111-111111111111111111111---11111111111111--111111111111111111----1-----111111111-111111111111---------------111111111111111111111-------------------------------------11111---11-11111-111111111------1111111-----------11111111111111111111----------------------------------------------------------------------1111111111111111-111111211-1-11------------1111---1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------1111111111111111111111-1111111111111111112----------111 1111111-311111111111111121111111112111111111111111111111121111111111-1111112222211111111-12112111111111222121311111111111111111111B1-1231111111111111111111211112-1121121121221111181111112421322222224 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 522 STR:RPRED 90.6 SQ:SECSTR ##ccccHHHHHTTcEEETTGGGcccTTcEEEcHHHHHHHHHHHHHHHHHHTTcccEEEEccccEEEHHHHHHTcHHHHcEEEEccccccccccccEEEEcHHHHHHHcccccHccccHHHHHHEccEEEEccccccGGGEEccEcHHHHHHHcccccEEEcccTHHHHHTTHHHHHHHHTccccEEEEEEEEEEcccccccTTTTcccEEEEEEEEEEEcGGGHHHHHHHHHHHHHHHHHHHHHHHTcGGHHEEccHHTccccEEEHHHHHHHHHHHHHHHHHTTccGGGEEEEEccTTcccTTEEEEEEEEEEETTEEEEEEEEEEEccHHHHHTcTTTTTTTcccccccccccccccEEccc###############################################HHHHTcccEcccEEEcEEccEEEEEEEEHHHHHHHHHHHHEEEEcTTccEEEEEcccGGGccccEEEEEcccccHHHHHHHHHHHHHHHTTTcEEEcccccHHHHHHHHHHTTccEEEEEcHHHHTccEEEEEETTTccEEEEEHHHHHHHHHHHHTTcc##### DISOP:02AL 575-576| PSIPRED cHHHHHHHHHHcccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHccccccccccHHHHcccccEEccHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEHHHHccccccccEEcccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHcccHHHcEEEcccHHHHHHHHcccEEEEEEEccccEEEEEEEcccEEEcccHHHHHcccEEEEEcccccEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccEEEEEccEEEEEccEEEEEEEEEEcccccEEEEEEEEEcccHHHHHHHHHHHHHcccccccccccEEEcccccccEEEEEEEccccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEEEEcHHHHHccEEEEEEccccEEEEEEHHHHHHHHHHHHcccccHHcc //