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Halobacterium sp. NRC-1 (halo0)
Gene : kinA1
DDBJ      :kinA1        signal-transducing histidine kinase homolog
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  535/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
a.30.2d.110.3d.122.1f.55.1
:606 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   399->600 3dgeA PDBj 1e-11 27.2 %
:RPS:PDB   272->316 3c2wE PDBj 3e-04 15.9 %
:RPS:PDB   294->602 3crlA PDBj 1e-24 11.3 %
:RPS:SCOP  272->401 2axtC1  f.55.1.1 * 9e-12 10.9 %
:RPS:SCOP  374->450 2c2aA1  a.30.2.1 * 6e-06 21.1 %
:RPS:SCOP  464->602 1id0A  d.122.1.3 * 1e-15 21.5 %
:HMM:SCOP  26->135 1v9yA_ d.110.3.2 * 9.1e-05 20.8 %
:HMM:SCOP  146->255 1ll8A_ d.110.3.5 * 6.5e-12 28.7 %
:HMM:SCOP  252->376 1ew0A_ d.110.3.2 * 1.3e-22 31.5 %
:HMM:SCOP  381->451 1joyA_ a.30.2.1 * 0.00015 20.9 %
:HMM:SCOP  458->606 1ysrA1 d.122.1.3 * 2.5e-25 26.7 %
:RPS:PFM   280->378 PF08448 * PAS_4 2e-04 42.9 %
:RPS:PFM   500->602 PF02518 * HATPase_c 3e-10 39.0 %
:HMM:PFM   502->603 PF02518 * HATPase_c 4e-21 27.0 100/111  
:HMM:PFM   37->130 PF08448 * PAS_4 4.6e-07 19.6 92/110  
:HMM:PFM   277->379 PF08448 * PAS_4 4.6e-10 30.4 102/110  
:HMM:PFM   396->450 PF00512 * HisKA 2.4e-08 23.6 55/68  
:HMM:PFM   225->265 PF03737 * Methyltransf_6 0.00014 29.3 41/154  
:BLT:SWISS 280->604 FIXL_AZOC5 2e-16 26.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG19701.1 GT:GENE kinA1 GT:PRODUCT signal-transducing histidine kinase homolog GT:DATABASE GIB00041CH01 GT:ORG halo0 GB:ACCESSION GIB00041CH01 GB:LOCATION 1023071..1024891 GB:FROM 1023071 GB:TO 1024891 GB:DIRECTION + GB:GENE kinA1 GB:PRODUCT signal-transducing histidine kinase homolog GB:NOTE KinA1 GB:PROTEIN_ID AAG19701.1 GB:DB_XREF GI:10580883 GB:GENE:GENE kinA1 LENGTH 606 SQ:AASEQ MTPDLHSRTRHSCPARCPPMTHTPPHSYADVLAAVTDPVVVVQHGTVTFANPAFSELTGVADPVGAPIRSFAPQDTASDLDRFCDAVAAGNATRTHARVVLAGADTDRRLVTVDATRLNAAHQDAPATALVVVAAPESGMEWAHHERILDALPVGSFRTRLGDGVLLGVNDELVAFADAPSKAALRGRPATEFYATPAAREEIVATLSADGVVTETELELETLAGNTVWGTLTAVTVTHDGTTVVDGAIRDVTERRQLETELRQRARRFRRMFKHHSAPMLLIDPDSGGIQNANDAAAAFYGYSVSELTGMTVTDLNTLPSGALDTHRGQAEEGERNHFVFEHELADGERRTVEIHSSPIELDTDTVLFSIVVDVTERADYEARLETQRDNLDVLNQVLRHDIRNDLQLVLAYADMLAGELDGEHADYIERVLESADHAVELTKTARDIADVMLTDPDADHVMSLRATLEAELAEVRSSFPSAAVTVDGSIPDVTVHGNNMLDSVFRNLLKNAIQHNDQDSPDVTVSADCTDDNTATIHVADNGPGVPDAQKDAIFGKGETGLDSDGTGMGLYLVDTLVDSVGGRVTVSDNDPTGAVFSVTLRTGP GT:EXON 1|1-606:0| BL:SWS:NREP 1 BL:SWS:REP 280->604|FIXL_AZOC5|2e-16|26.2|321/504| SEG 29->42|advlaavtdpvvvv| SEG 125->136|apatalvvvaap| SEG 214->223|teteleletl| SEG 231->248|tltavtvthdgttvvdga| SEG 253->271|terrqletelrqrarrfrr| BL:PDB:NREP 1 BL:PDB:REP 399->600|3dgeA|1e-11|27.2|202/237| RP:PDB:NREP 2 RP:PDB:REP 272->316|3c2wE|3e-04|15.9|44/471| RP:PDB:REP 294->602|3crlA|1e-24|11.3|309/381| RP:PFM:NREP 2 RP:PFM:REP 280->378|PF08448|2e-04|42.9|91/111|PAS_4| RP:PFM:REP 500->602|PF02518|3e-10|39.0|100/112|HATPase_c| HM:PFM:NREP 5 HM:PFM:REP 502->603|PF02518|4e-21|27.0|100/111|HATPase_c| HM:PFM:REP 37->130|PF08448|4.6e-07|19.6|92/110|PAS_4| HM:PFM:REP 277->379|PF08448|4.6e-10|30.4|102/110|PAS_4| HM:PFM:REP 396->450|PF00512|2.4e-08|23.6|55/68|HisKA| HM:PFM:REP 225->265|PF03737|0.00014|29.3|41/154|Methyltransf_6| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 272->401|2axtC1|9e-12|10.9|129/447|f.55.1.1| RP:SCP:REP 374->450|2c2aA1|6e-06|21.1|76/89|a.30.2.1| RP:SCP:REP 464->602|1id0A|1e-15|21.5|135/146|d.122.1.3| HM:SCP:REP 26->135|1v9yA_|9.1e-05|20.8|106/0|d.110.3.2|1/3|PYP-like sensor domain (PAS domain)| HM:SCP:REP 146->255|1ll8A_|6.5e-12|28.7|108/114|d.110.3.5|2/3|PYP-like sensor domain (PAS domain)| HM:SCP:REP 252->376|1ew0A_|1.3e-22|31.5|124/130|d.110.3.2|3/3|PYP-like sensor domain (PAS domain)| HM:SCP:REP 381->451|1joyA_|0.00015|20.9|67/67|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 458->606|1ysrA1|2.5e-25|26.7|146/0|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 2254 OP:NHOMOORG 571 OP:PATTERN -----------------------Co99K7cOS------1111-UZ1Ld58524--------------2 -7D12-1-113--1-11----2--22-----13333-1312111-1--1-------------5-1-11112-------1-12--31113341-8------16-3288686--------------122222247A31565562-291D3544412222------13-244B--2-----2----74122---3-2111121-2-213112-121423312113-13-111--33---------------------11-11-----11----1-1131--1111------------------------------------------52141111221-2-1122----2131----312131----1---1-1--41B5664-----135434224346322222222223-8A59977A265-47759857B934242255121212241---------11-1V36--------------------------111--233--1--13121322111133-61111-235--412----2423112855-3128212-2-11-----1124882C8523B61LC75A14D4F8BG1653A2FI3B1-------------------21--12221-2244-745343433-23332-251243---2563------84213517667776767-67867676766777878876651112-4443345444444434355433471-522222221223----33333122123512-----------1-------------1212113753223332546---------5354522222224343323233222------D-333322--------1----------------------------1-112-221-5- --------------1--------1-1-----------111---1--------1--------------------------------------------------1------------------------------------------------------1------------------1-------------1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 335 STR:RPRED 55.3 SQ:SECSTR ###############################################################################################################################################################################################################################################################################cccTTcccccEEEcTcTccEcGGGHHHHHHHHHTcccccccHHHHHHHTcccccHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHTTTTccTTcHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccTTcEEEEEHHHHHHHHHHTcccccEEEEEEEcccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccEEEEEEEEccccccGGGTGGGGcTTTTcccccccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEEHcTT DISOP:02AL 15-16| PSIPRED cccccccccccccccccccccccccHHHHHHHHHccccEEEEcccEEEEEcHHHHHHccccHHHccccHHHcccccHHHHHHHHHHHHHccccEEEEEEEEEcccccEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEHHHHHHHHHccccHHHHccccHHHHcccccHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccEEEEccHHHHHHHcccHHHHccccHHHHccccHHHHHHHHHHHHHccccEEEEEEEEccccEEEEEEEEEEEEEcccEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHHHHHHHcEEEEEcccccEEEccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEcccEEEEEEEEccccccHHHHHHHccccEEcccccccEEHHHHHHHHHHHHccEEEEEEEcccEEEEEEEEcccc //