Halobacterium sp. NRC-1 (halo0)
Gene : panF
DDBJ :panF pantothenate permease
Swiss-Prot:
Homologs Archaea 11/68 : Bacteria 38/915 : Eukaryota 3/199 : Viruses 0/175 --->[See Alignment]
:482 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM 93->413 PF00474 * SSF 4e-15 25.4 %
:HMM:PFM 22->413 PF00474 * SSF 4.6e-43 26.5 385/406
:HMM:PFM 447->467 PF11021 * DUF2613 7.8e-05 52.4 21/56
:BLT:SWISS 72->260 YHJB_BACSU 5e-09 25.9 %
:TM
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG20007.1
GT:GENE panF
GT:PRODUCT pantothenate permease
GT:DATABASE GIB00041CH01
GT:ORG halo0
GB:ACCESSION GIB00041CH01
GB:LOCATION 1321603..1323051
GB:FROM 1321603
GB:TO 1323051
GB:DIRECTION +
GB:GENE panF
GB:PRODUCT pantothenate permease
GB:NOTE PanF
GB:PROTEIN_ID AAG20007.1
GB:DB_XREF GI:10581239
GB:GENE:GENE panF
LENGTH 482
SQ:AASEQ MVVALAVGLVAYRVTDRDAEDYYLAGRGLGTGVLLFTTFATLLSAFTFFAGPNIAYANGPEWILVMGLMDGVLFGLLWYVLGYRQWLLGKANGYVTLGEMLGDRFGSRGLRGLVAGVSIFWLFPYVMLQQIGAGEALVGLTGGAVPYWAGAGFITLFMVVYVAISGMRGVAWTDTLQGVFMLGITWVAFVWVAAEIAGTTGGLAGALPAEFRALGGGAYSPQWMLSQAIGIAVGVSMFPQVNQRFFVADSKRTLKRTFAIWPLLVVLLFVPAFLMGAWANGVGLPLPDGENIVPILLSEYTPGWFAALVVAGALAAMMSSSDSMLLSGSSYFTRDIYRPFVNADATARREDTLGRVGVAAFAVAAFGGSLLRPGSLLEVGSTAFGGFAQLAPPVALAMYWRRTTKAGMFAGVLGTQAFYLATVFGPPVTLAGVPIIASSYFGWFAQVVGLPLGVVLTVGVSAVTAPSDTENASAYVDALRAD
GT:EXON 1|1-482:0|
BL:SWS:NREP 1
BL:SWS:REP 72->260|YHJB_BACSU|5e-09|25.9|185/489|
TM:NTM 12
TM:REGION 29->51|
TM:REGION 64->85|
TM:REGION 106->128|
TM:REGION 149->171|
TM:REGION 182->204|
TM:REGION 217->239|
TM:REGION 257->279|
TM:REGION 300->321|
TM:REGION 351->373|
TM:REGION 379->400|
TM:REGION 410->432|
TM:REGION 443->464|
SEG 26->51|grglgtgvllfttfatllsaftffag|
SEG 193->210|aaeiagttgglagalpae|
SEG 262->274|pllvvllfvpafl|
SEG 306->330|aalvvagalaammsssdsmllsgss|
SEG 356->368|vgvaafavaafgg|
SEG 447->460|vvglplgvvltvgv|
RP:PFM:NREP 1
RP:PFM:REP 93->413|PF00474|4e-15|25.4|319/401|SSF|
HM:PFM:NREP 2
HM:PFM:REP 22->413|PF00474|4.6e-43|26.5|385/406|SSF|
HM:PFM:REP 447->467|PF11021|7.8e-05|52.4|21/56|DUF2613|
GO:PFM:NREP 4
GO:PFM GO:0005215|"GO:transporter activity"|PF00474|IPR001734|
GO:PFM GO:0006810|"GO:transport"|PF00474|IPR001734|
GO:PFM GO:0016020|"GO:membrane"|PF00474|IPR001734|
GO:PFM GO:0055085|"GO:transmembrane transport"|PF00474|IPR001734|
OP:NHOMO 56
OP:NHOMOORG 52
OP:PATTERN ----1------------------111111111--1--------------------------------- ----------------------------------------------------------------------------------1-------------------------1-------------------------------------1------11-----1---------1-----------------------1111111111211111-----112--1-2-----------------------------------------------------------------------------------------------------------------------------------------1--------------1-----------------------------------------1------------------------------------------------------------------------------------------1--1----11--------1-----------------------------------------------------------------------------------------------------------------------------------------2-----------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111---------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
DISOP:02AL 482-483|
PSIPRED cHHHHHHHHHHHHcccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccc
//
[GTOP]
