[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Halobacterium sp. NRC-1 (halo0)
Gene : panF
DDBJ      :panF         pantothenate permease
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  38/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:482 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   93->413 PF00474 * SSF 4e-15 25.4 %
:HMM:PFM   22->413 PF00474 * SSF 4.6e-43 26.5 385/406  
:HMM:PFM   447->467 PF11021 * DUF2613 7.8e-05 52.4 21/56  
:BLT:SWISS 72->260 YHJB_BACSU 5e-09 25.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG20007.1 GT:GENE panF GT:PRODUCT pantothenate permease GT:DATABASE GIB00041CH01 GT:ORG halo0 GB:ACCESSION GIB00041CH01 GB:LOCATION 1321603..1323051 GB:FROM 1321603 GB:TO 1323051 GB:DIRECTION + GB:GENE panF GB:PRODUCT pantothenate permease GB:NOTE PanF GB:PROTEIN_ID AAG20007.1 GB:DB_XREF GI:10581239 GB:GENE:GENE panF LENGTH 482 SQ:AASEQ MVVALAVGLVAYRVTDRDAEDYYLAGRGLGTGVLLFTTFATLLSAFTFFAGPNIAYANGPEWILVMGLMDGVLFGLLWYVLGYRQWLLGKANGYVTLGEMLGDRFGSRGLRGLVAGVSIFWLFPYVMLQQIGAGEALVGLTGGAVPYWAGAGFITLFMVVYVAISGMRGVAWTDTLQGVFMLGITWVAFVWVAAEIAGTTGGLAGALPAEFRALGGGAYSPQWMLSQAIGIAVGVSMFPQVNQRFFVADSKRTLKRTFAIWPLLVVLLFVPAFLMGAWANGVGLPLPDGENIVPILLSEYTPGWFAALVVAGALAAMMSSSDSMLLSGSSYFTRDIYRPFVNADATARREDTLGRVGVAAFAVAAFGGSLLRPGSLLEVGSTAFGGFAQLAPPVALAMYWRRTTKAGMFAGVLGTQAFYLATVFGPPVTLAGVPIIASSYFGWFAQVVGLPLGVVLTVGVSAVTAPSDTENASAYVDALRAD GT:EXON 1|1-482:0| BL:SWS:NREP 1 BL:SWS:REP 72->260|YHJB_BACSU|5e-09|25.9|185/489| TM:NTM 12 TM:REGION 29->51| TM:REGION 64->85| TM:REGION 106->128| TM:REGION 149->171| TM:REGION 182->204| TM:REGION 217->239| TM:REGION 257->279| TM:REGION 300->321| TM:REGION 351->373| TM:REGION 379->400| TM:REGION 410->432| TM:REGION 443->464| SEG 26->51|grglgtgvllfttfatllsaftffag| SEG 193->210|aaeiagttgglagalpae| SEG 262->274|pllvvllfvpafl| SEG 306->330|aalvvagalaammsssdsmllsgss| SEG 356->368|vgvaafavaafgg| SEG 447->460|vvglplgvvltvgv| RP:PFM:NREP 1 RP:PFM:REP 93->413|PF00474|4e-15|25.4|319/401|SSF| HM:PFM:NREP 2 HM:PFM:REP 22->413|PF00474|4.6e-43|26.5|385/406|SSF| HM:PFM:REP 447->467|PF11021|7.8e-05|52.4|21/56|DUF2613| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF00474|IPR001734| GO:PFM GO:0006810|"GO:transport"|PF00474|IPR001734| GO:PFM GO:0016020|"GO:membrane"|PF00474|IPR001734| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00474|IPR001734| OP:NHOMO 56 OP:NHOMOORG 52 OP:PATTERN ----1------------------111111111--1--------------------------------- ----------------------------------------------------------------------------------1-------------------------1-------------------------------------1------11-----1---------1-----------------------1111111111211111-----112--1-2-----------------------------------------------------------------------------------------------------------------------------------------1--------------1-----------------------------------------1------------------------------------------------------------------------------------------1--1----11--------1-----------------------------------------------------------------------------------------------------------------------------------------2-----------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111---------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 482-483| PSIPRED cHHHHHHHHHHHHcccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccc //